BLASTX nr result
ID: Rehmannia22_contig00035680
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00035680
(552 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006464882.1| PREDICTED: putative ribonuclease H protein A... 79 6e-13
ref|XP_006493122.1| PREDICTED: putative ribonuclease H protein A... 79 9e-13
ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein A... 79 9e-13
ref|XP_006471930.1| PREDICTED: uncharacterized protein LOC102617... 70 3e-10
ref|XP_006491602.1| PREDICTED: uncharacterized protein LOC102623... 68 2e-09
ref|XP_006487889.1| PREDICTED: uncharacterized protein LOC102617... 66 5e-09
ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621... 66 6e-09
ref|XP_006492478.1| PREDICTED: putative ribonuclease H protein A... 62 7e-08
ref|XP_006494016.1| PREDICTED: uncharacterized protein LOC102608... 62 9e-08
ref|XP_004298270.1| PREDICTED: putative ribonuclease H protein A... 62 1e-07
ref|XP_006492749.1| PREDICTED: uncharacterized protein LOC102612... 60 3e-07
ref|XP_006485451.1| PREDICTED: uncharacterized protein LOC102622... 60 3e-07
ref|XP_004289367.1| PREDICTED: putative ribonuclease H protein A... 59 8e-07
gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ... 58 2e-06
gb|ABF97084.1| retrotransposon protein, putative, unclassified [... 58 2e-06
ref|XP_006473914.1| PREDICTED: uncharacterized protein LOC102629... 57 2e-06
>ref|XP_006464882.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 769
Score = 79.3 bits (194), Expect = 6e-13
Identities = 42/162 (25%), Positives = 74/162 (45%)
Frame = -1
Query: 537 CDLCHSHADTTSHSLFFCPAIRHLWKHSGFWNELKLAAVGDEIDVVDVGLWMKRKIGLTR 358
C C SH +T HSLF C A R +WK + F E+K D + ++ L + + T
Sbjct: 491 CQRCRSHRETIFHSLFDCKASRKIWKLTTFEEEVKALKCKDVLSLL---LALADRRSKTE 547
Query: 357 FTSFASYTWGVWKEKQNYLHDLERTKVADNINWVETFLGAFQETQKMDRGTQERCGRGSE 178
+ W +W + ++ ++ ++ E + +++ Q S
Sbjct: 548 MELIVAVCWSIWHSRNLFIFQNKKEDFQLSVAGAEAIVQSYKRIQMPQLQAFSNQDLVSH 607
Query: 177 VNWKCPPTGTLRLDVDACVNYKDNRYAVGGIIRNELGKPVCA 52
+WKCPP G +++VDA + ++ R +G +IRN GK + A
Sbjct: 608 KHWKCPPAGWFKVNVDAAIKLENQRVGLGIVIRNSEGKFITA 649
>ref|XP_006493122.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
X2 [Citrus sinensis]
Length = 765
Score = 78.6 bits (192), Expect = 9e-13
Identities = 42/162 (25%), Positives = 74/162 (45%)
Frame = -1
Query: 537 CDLCHSHADTTSHSLFFCPAIRHLWKHSGFWNELKLAAVGDEIDVVDVGLWMKRKIGLTR 358
C C SH +T HSLF C A R +WK + F E+K D + ++ L + + T
Sbjct: 491 CQRCRSHRETIFHSLFDCKASRKIWKLTTFEEEVKALKCKDVLSLL---LALADRRSKTE 547
Query: 357 FTSFASYTWGVWKEKQNYLHDLERTKVADNINWVETFLGAFQETQKMDRGTQERCGRGSE 178
+ W +W + ++ ++ ++ E + +++ Q S
Sbjct: 548 MELIVAVCWSIWHSRNLFIFQNKKEDFQLSVAGAEAIVQSYKRIQMPQLQAFSDQDLVSH 607
Query: 177 VNWKCPPTGTLRLDVDACVNYKDNRYAVGGIIRNELGKPVCA 52
+WKCPP G +++VDA + ++ R +G +IRN GK + A
Sbjct: 608 KHWKCPPAGWFKVNVDAAIKLENQRVGLGIVIRNSEGKFITA 649
>ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform X1
[Citrus sinensis]
Length = 968
Score = 78.6 bits (192), Expect = 9e-13
Identities = 42/162 (25%), Positives = 74/162 (45%)
Frame = -1
Query: 537 CDLCHSHADTTSHSLFFCPAIRHLWKHSGFWNELKLAAVGDEIDVVDVGLWMKRKIGLTR 358
C C SH +T HSLF C A R +WK + F E+K D + ++ L + + T
Sbjct: 694 CQRCRSHRETIFHSLFDCKASRKIWKLTTFEEEVKALKCKDVLSLL---LALADRRSKTE 750
Query: 357 FTSFASYTWGVWKEKQNYLHDLERTKVADNINWVETFLGAFQETQKMDRGTQERCGRGSE 178
+ W +W + ++ ++ ++ E + +++ Q S
Sbjct: 751 MELIVAVCWSIWHSRNLFIFQNKKEDFQLSVAGAEAIVQSYKRIQMPQLQAFSDQDLVSH 810
Query: 177 VNWKCPPTGTLRLDVDACVNYKDNRYAVGGIIRNELGKPVCA 52
+WKCPP G +++VDA + ++ R +G +IRN GK + A
Sbjct: 811 KHWKCPPAGWFKVNVDAAIKLENQRVGLGIVIRNSEGKFITA 852
>ref|XP_006471930.1| PREDICTED: uncharacterized protein LOC102617744 [Citrus sinensis]
Length = 294
Score = 70.1 bits (170), Expect = 3e-10
Identities = 43/162 (26%), Positives = 69/162 (42%)
Frame = -1
Query: 537 CDLCHSHADTTSHSLFFCPAIRHLWKHSGFWNELKLAAVGDEIDVVDVGLWMKRKIGLTR 358
C CH +T SH+LF C A R W + EL+ G +I L +
Sbjct: 17 CPRCHKSVETISHALFECKAARKTWNLAPSTFELQNVP-GQDIFSYAQNLCSNSRRNEAE 75
Query: 357 FTSFASYTWGVWKEKQNYLHDLERTKVADNINWVETFLGAFQETQKMDRGTQERCGRGSE 178
Y W +W + + + ++ + + E+ L A+Q +K S+
Sbjct: 76 L--MIMYCWAIWFARNKLIFERKKIEPIVSAAKAESMLEAYQRVRKTGTLHISNTREESQ 133
Query: 177 VNWKCPPTGTLRLDVDACVNYKDNRYAVGGIIRNELGKPVCA 52
W PPT L+L+VDA N KD + +G ++R+ G+ V A
Sbjct: 134 QRWSPPPTNVLKLNVDAATNSKDQKVGLGAVLRDSNGRVVAA 175
>ref|XP_006491602.1| PREDICTED: uncharacterized protein LOC102623801 [Citrus sinensis]
Length = 441
Score = 67.8 bits (164), Expect = 2e-09
Identities = 42/162 (25%), Positives = 74/162 (45%)
Frame = -1
Query: 537 CDLCHSHADTTSHSLFFCPAIRHLWKHSGFWNELKLAAVGDEIDVVDVGLWMKRKIGLTR 358
C C + H+L C + +W+++G E++ + D++ V + ++RK G
Sbjct: 163 CRRCGVKNEDVIHALLDCKVAKKVWRNAGCAEEIEKLV---QQDLMAVLVEIQRKKGKKE 219
Query: 357 FTSFASYTWGVWKEKQNYLHDLERTKVADNINWVETFLGAFQETQKMDRGTQERCGRGSE 178
W +W + ++ + +R +I E L +F+ +K E+ R +
Sbjct: 220 LELIVVLCWTIWYSRNLFIFENKREDSQLSIARAEANLDSFRRIKKPSSKILEKQQRNRK 279
Query: 177 VNWKCPPTGTLRLDVDACVNYKDNRYAVGGIIRNELGKPVCA 52
W PP G +++VDA VN KD +G IIRN G+ V A
Sbjct: 280 QVWNPPPCGWFKINVDAAVNVKDQIAGLGVIIRNSNGEVVAA 321
>ref|XP_006487889.1| PREDICTED: uncharacterized protein LOC102617714 [Citrus sinensis]
Length = 1238
Score = 66.2 bits (160), Expect = 5e-09
Identities = 41/162 (25%), Positives = 75/162 (46%)
Frame = -1
Query: 537 CDLCHSHADTTSHSLFFCPAIRHLWKHSGFWNELKLAAVGDEIDVVDVGLWMKRKIGLTR 358
C C + H+L C + +W+++G E++ + D++ V + ++RK G
Sbjct: 960 CRRCGVKNEDVIHALLDCKVAKKVWRNAGCAEEIEKLV---QQDLMAVLVEIQRKKGKKE 1016
Query: 357 FTSFASYTWGVWKEKQNYLHDLERTKVADNINWVETFLGAFQETQKMDRGTQERCGRGSE 178
W +W + ++ + +R +I E + +F+ +K E+ R +
Sbjct: 1017 LELIVVLCWTIWYSQNLFIFENKREDSQLSIARAEANMDSFKRIKKPFSKILEKQQRNRK 1076
Query: 177 VNWKCPPTGTLRLDVDACVNYKDNRYAVGGIIRNELGKPVCA 52
W PP+G +++VDA VN KD +G IIRN G+ V A
Sbjct: 1077 QVWNPPPSGWFKINVDAAVNVKDQIAGLGVIIRNSNGEVVAA 1118
>ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621413 [Citrus sinensis]
Length = 2303
Score = 65.9 bits (159), Expect = 6e-09
Identities = 38/162 (23%), Positives = 74/162 (45%)
Frame = -1
Query: 537 CDLCHSHADTTSHSLFFCPAIRHLWKHSGFWNELKLAAVGDEIDVVDVGLWMKRKIGLTR 358
C C+ +T H+L C A R +W H+ ++ A D ++ + +W G T+
Sbjct: 1057 CQGCNREVETVRHALLDCKAARKIWYHATSSVQISNAQNQDILEFI-YEVWSTW--GKTK 1113
Query: 357 FTSFASYTWGVWKEKQNYLHDLERTKVADNINWVETFLGAFQETQKMDRGTQERCGRGSE 178
++ W +W + + + +++ + E+ L A+ +K D R +
Sbjct: 1114 AEQTIAFCWAIWFARNKRIFEGKKSDPRASAAKAESLLEAYHRARKPDASHIHNVKRIVQ 1173
Query: 177 VNWKCPPTGTLRLDVDACVNYKDNRYAVGGIIRNELGKPVCA 52
W+ PP L+++VDA +N +D +G +I++ GK V A
Sbjct: 1174 KKWEPPPGNFLKVNVDAAINNRDQVAGLGAVIKDPSGKIVAA 1215
>ref|XP_006492478.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
X1 [Citrus sinensis] gi|568879016|ref|XP_006492479.1|
PREDICTED: putative ribonuclease H protein
At1g65750-like isoform X2 [Citrus sinensis]
Length = 320
Score = 62.4 bits (150), Expect = 7e-08
Identities = 35/163 (21%), Positives = 80/163 (49%), Gaps = 1/163 (0%)
Frame = -1
Query: 537 CDLCHSHADTTSHSLFFCPAIRHLWKHSGFWNELKLAAVGDEIDVVDVGLWMKRKIGLTR 358
C +C + SH+L + +W+H+ E++ A+ D + ++ + +K+ TR
Sbjct: 93 CQICKKELENISHALLDYKLAKKMWRHTHIAAEVQNEAIQDFLSMLQS---LTKKL-TTR 148
Query: 357 FTSFASYTW-GVWKEKQNYLHDLERTKVADNINWVETFLGAFQETQKMDRGTQERCGRGS 181
AS+ W GVW + +++ ++ ++A +I V + A+Q ++ ++ ++
Sbjct: 149 EIELASFVWWGVWNARNKVIYERKKPELAISIAKVTAVMEAYQRVKEPEQQQLKQSEPRE 208
Query: 180 EVNWKCPPTGTLRLDVDACVNYKDNRYAVGGIIRNELGKPVCA 52
W+ PP G +++VDA ++ +G +I++ K + A
Sbjct: 209 THQWEPPPEGWHKINVDATIDKNQQIAGLGIVIKDSYQKTIAA 251
>ref|XP_006494016.1| PREDICTED: uncharacterized protein LOC102608298 [Citrus sinensis]
Length = 1570
Score = 62.0 bits (149), Expect = 9e-08
Identities = 38/163 (23%), Positives = 76/163 (46%), Gaps = 1/163 (0%)
Frame = -1
Query: 537 CDLCHSHADTTSHSLFFCPAIRHLWKHSGFWNELKLAAVGDEIDVVDVGLWMKRKIGLTR 358
C C+ +T H+L C ++ +WK + F ++LK + E D++ + + +K +
Sbjct: 994 CQFCNKKLETIFHALVGCKVVKKIWKITRFEDDLKDSV---EQDMLSLLIELKLRRSKDD 1050
Query: 357 FTSFASYTWGVWKEKQNYLHDLERTKVADNINWVETFLGAFQETQKMDRGTQERCGRGSE 178
+ W +W + +++ + ++ E L AF+ TQ + T S+
Sbjct: 1051 IELLVTILWMIWNAQNSWIFKGVKDSPHVTVSKAEAVLEAFRRTQ-LPAATHIDIQSSSK 1109
Query: 177 VN-WKCPPTGTLRLDVDACVNYKDNRYAVGGIIRNELGKPVCA 52
+ WK P G +++VDA N + ++G +IR+E G + A
Sbjct: 1110 LKAWKPPQRGHFKVNVDAATNSEKQIASLGAVIRDEAGNVIAA 1152
>ref|XP_004298270.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 393
Score = 61.6 bits (148), Expect = 1e-07
Identities = 38/168 (22%), Positives = 67/168 (39%), Gaps = 1/168 (0%)
Frame = -1
Query: 537 CDLCHSHADTTSHSLFFCPAIRHLWKHSGFWNELKLAAVGDEIDVVDVGLWMKR-KIGLT 361
C C + +T H CP ++ WKH N L L + + V +++ + +
Sbjct: 92 CIFCGNEVETGLHLFRDCPVVQSFWKH----NPLHLRSYSYPGSTLAVWVFLVMDNLSMQ 147
Query: 360 RFTSFASYTWGVWKEKQNYLHDLERTKVADNINWVETFLGAFQETQKMDRGTQERCGRGS 181
+ F W VW E+ N + ++ W L +++ +R
Sbjct: 148 QLEGFFMALWTVWIERNNMIWRGGSCNPSNMSVWAMQLLEEYKKVHTKPSVKMKR----P 203
Query: 180 EVNWKCPPTGTLRLDVDACVNYKDNRYAVGGIIRNELGKPVCAFGEHI 37
W CPP+G L+L++D + +G ++RNE G V A H+
Sbjct: 204 RAKWCCPPSGRLKLNIDGAYLEDGRKGGIGVVVRNEYGNCVAALSRHM 251
>ref|XP_006492749.1| PREDICTED: uncharacterized protein LOC102612946 [Citrus sinensis]
Length = 589
Score = 60.5 bits (145), Expect = 3e-07
Identities = 38/164 (23%), Positives = 69/164 (42%), Gaps = 2/164 (1%)
Frame = -1
Query: 537 CDLCHSHADTTSHSLFFCPAIRHLWKHSGFWNELKLAAVGDEIDVVDVGL--WMKRKIGL 364
C LC + + H+L C R +WK + NE+K D + V+ + W K ++
Sbjct: 312 CHLCKAGCEDVFHALMECRVARKIWKCTHLENEVKSVIREDMLSVMIGAMNNWAKSEVDY 371
Query: 363 TRFTSFASYTWGVWKEKQNYLHDLERTKVADNINWVETFLGAFQETQKMDRGTQERCGRG 184
A+ W W + L ++ ++ +T + +Q Q +R + +G
Sbjct: 372 V-----ATIWWVAWHARNKLLFQGKKLDPIGSVAKGKTVMEVYQAQQVKERESHRNTVKG 426
Query: 183 SEVNWKCPPTGTLRLDVDACVNYKDNRYAVGGIIRNELGKPVCA 52
W PP ++++VDA V +G +IRN G+ + A
Sbjct: 427 KMQIWTPPPNNKVKVNVDAAVKEDRKSAGLGVVIRNHRGQVLAA 470
>ref|XP_006485451.1| PREDICTED: uncharacterized protein LOC102622884 [Citrus sinensis]
Length = 1160
Score = 60.5 bits (145), Expect = 3e-07
Identities = 37/158 (23%), Positives = 72/158 (45%)
Frame = -1
Query: 537 CDLCHSHADTTSHSLFFCPAIRHLWKHSGFWNELKLAAVGDEIDVVDVGLWMKRKIGLTR 358
C LC + H+L C A + +W+ S F+ +++ AA G D++ + +KR
Sbjct: 850 CQLCKMGIENVFHALVDCKAAKKVWRLSLFYIDIQ-AAPGQ--DILSLLHGVKRMRSNAD 906
Query: 357 FTSFASYTWGVWKEKQNYLHDLERTKVADNINWVETFLGAFQETQKMDRGTQERCGRGSE 178
FA W W + +L +R + E + A++ Q + + + ++
Sbjct: 907 VDLFAVMLWAKWNARNQWLFKGKRENPQSVVAKAEAVMEAYKRVQPSADVSHGKQQKVAQ 966
Query: 177 VNWKCPPTGTLRLDVDACVNYKDNRYAVGGIIRNELGK 64
+ W P G ++++ DA N + N +G +IR+E G+
Sbjct: 967 LGWNPPQEGFVKINTDAATNSEKNLAGLGAVIRDENGQ 1004
>ref|XP_004289367.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 1152
Score = 58.9 bits (141), Expect = 8e-07
Identities = 34/163 (20%), Positives = 74/163 (45%), Gaps = 1/163 (0%)
Frame = -1
Query: 537 CDLCHSHADTTSHSLFFCPAIRHLWKHSGFWNELKLAAVGDEIDVVDVGLW-MKRKIGLT 361
C C ++ + + H C A++ W+ +++ V+V W M +
Sbjct: 845 CVFCSTNVEDSLHLFKNCEALQPFWQQG----MVQIHPRTHPSISVEVWFWDMVEMLSGE 900
Query: 360 RFTSFASYTWGVWKEKQNYLHDLERTKVADNINWVETFLGAFQETQKMDRGTQERCGRGS 181
+ F W +W E+ N + + + + ++W + L ++ + GT+++ +
Sbjct: 901 KLEGFLMALWVIWVERNNMVWRGQFYNITNMMDWSSSLLLEYKHCHQRSVGTRKK----N 956
Query: 180 EVNWKCPPTGTLRLDVDACVNYKDNRYAVGGIIRNELGKPVCA 52
+ W CPP+G LR+++D +++ R VG +IR+ G V +
Sbjct: 957 KSKWTCPPSGRLRVNIDGSFAHEEGRGGVGVVIRDHKGACVAS 999
>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
Length = 1747
Score = 57.8 bits (138), Expect = 2e-06
Identities = 46/185 (24%), Positives = 79/185 (42%), Gaps = 6/185 (3%)
Frame = -1
Query: 537 CDLCHSHADTTSHSLFFCPAIRHLWKHSGFWNELKLAAVGDEIDVVDVGLWMKRKIGLTR 358
C C ++ H+ + C +++ +GF+++L I ++ K L
Sbjct: 1367 CFRCQQGRESPVHATWGCSCCVAVFERAGFYSKLSSGQFPSFIHLLHHAFSTLDKEELQL 1426
Query: 357 FTSFASYTWGVWKEKQNYLHDLERTKVADNINWVE--TFLGAFQETQKMDRGTQ----ER 196
F A W W E+ N H + V +I + FL F+E G + E
Sbjct: 1427 F---AVLLWLNWHERNNCYH--KGAVVPSDIIYENGVKFLKCFKEALGCRAGVEVKAVEE 1481
Query: 195 CGRGSEVNWKCPPTGTLRLDVDACVNYKDNRYAVGGIIRNELGKPVCAFGEHIERPDNVF 16
GS W+ P +G L+++ D N+KD + G IIR+E G + A G++ + P +
Sbjct: 1482 VVPGSLRRWQAPSSGQLKVNCDGAANFKDRCFGGGTIIRDEFGSLIVAGGKNFQHPVSSL 1541
Query: 15 EGELV 1
EL+
Sbjct: 1542 VAELL 1546
>gb|ABF97084.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1184
Score = 57.8 bits (138), Expect = 2e-06
Identities = 39/172 (22%), Positives = 70/172 (40%), Gaps = 8/172 (4%)
Frame = -1
Query: 543 GGCDLCHSHADTTSHSLFFCPAIRHLWKHSGFWNELKLAAVGDEIDVVDVGLWMKR---- 376
GGC +C S + H +F C + +WK G W+ ++ D V V +++
Sbjct: 899 GGCPVCSSGVEDIKHMVFTCRRAKLIWKQLGIWSRIQPILGFDRSGSVLVEEMIRKGGKV 958
Query: 375 ----KIGLTRFTSFASYTWGVWKEKQNYLHDLERTKVADNINWVETFLGAFQETQKMDRG 208
IG+T + W +W E++ + A + + T + + K +
Sbjct: 959 SHLNAIGMTEL--ILTGAWYIWWERRQLVQGERIQNPARSAMSIATLTTNYMLSNKKGKT 1016
Query: 207 TQERCGRGSEVNWKCPPTGTLRLDVDACVNYKDNRYAVGGIIRNELGKPVCA 52
+ WK PP G L ++VDA ++ +G ++R+ LG V A
Sbjct: 1017 KIQN-------GWKKPPEGMLMINVDAAFDFDSGSGGIGVVLRDHLGACVAA 1061
>ref|XP_006473914.1| PREDICTED: uncharacterized protein LOC102629934 [Citrus sinensis]
Length = 304
Score = 57.4 bits (137), Expect = 2e-06
Identities = 36/162 (22%), Positives = 64/162 (39%)
Frame = -1
Query: 537 CDLCHSHADTTSHSLFFCPAIRHLWKHSGFWNELKLAAVGDEIDVVDVGLWMKRKIGLTR 358
C C +T H LF C + +W+ + F + +L V D ++ L KR
Sbjct: 26 CQRCKKTRETVCHMLFECKVSKQIWRLTPFVVDSQLGKVRDVFSLLQ-DLTTKRT--KAE 82
Query: 357 FTSFASYTWGVWKEKQNYLHDLERTKVADNINWVETFLGAFQETQKMDRGTQERCGRGSE 178
+ W +W + + +R ++ E + +++ Q +
Sbjct: 83 MELIVAVCWSIWHSRNLAIFKNKREDSHLSVAAAEALVQSYKRIQMPQMSKSPPTSLAIQ 142
Query: 177 VNWKCPPTGTLRLDVDACVNYKDNRYAVGGIIRNELGKPVCA 52
W PP G +++VDA V + R +G +IRN GK + A
Sbjct: 143 QKWSYPPEGWFKVNVDAAVKMEQQRTGLGIVIRNSEGKVMAA 184