BLASTX nr result

ID: Rehmannia22_contig00035262 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00035262
         (548 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EPS72967.1| hypothetical protein M569_01792 [Genlisea aurea]       104   2e-20
ref|XP_003634944.1| PREDICTED: pentatricopeptide repeat-containi...    69   6e-10
ref|XP_004243688.1| PREDICTED: pentatricopeptide repeat-containi...    67   4e-09
gb|EXC01127.1| hypothetical protein L484_025500 [Morus notabilis]      65   1e-08
gb|EOY17094.1| Pentatricopeptide repeat superfamily protein, put...    61   2e-07
ref|XP_002325952.1| hypothetical protein POPTR_0019s10460g [Popu...    61   2e-07
ref|XP_006353779.1| PREDICTED: pentatricopeptide repeat-containi...    60   3e-07

>gb|EPS72967.1| hypothetical protein M569_01792 [Genlisea aurea]
          Length = 447

 Score =  104 bits (259), Expect = 2e-20
 Identities = 57/120 (47%), Positives = 82/120 (68%), Gaps = 4/120 (3%)
 Frame = +3

Query: 201 NMHRCFTVSSSDGRIVSGTVV--ESEVHNVANICSDQQKLDKRNNYPQ--FVLEIVDMIR 368
           N HR    S   GR+++  +   + +VH++ ++ SD+Q LD R    Q  FV EIV ++R
Sbjct: 25  NAHR----SIYSGRVLNELITSGQRQVHSLCSLSSDEQGLDTRKKRVQCKFVCEIVSILR 80

Query: 369 NNGDGLESRLNMMSSRLSVYSITEIFEVLNTRRISGLRLFEWIWTNNPLLRNNAKVCSLI 548
           N+G  LESRL  ++ RLS+Y+ITEIFE LNT+R+SGL+LF WI  N+P L  +A+VCSL+
Sbjct: 81  NDGKDLESRLIKLAPRLSLYTITEIFEALNTQRVSGLKLFIWIRNNSPKLHKSARVCSLL 140


>ref|XP_003634944.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial-like [Vitis vinifera]
          Length = 582

 Score = 69.3 bits (168), Expect = 6e-10
 Identities = 35/75 (46%), Positives = 50/75 (66%)
 Frame = +3

Query: 324 NNYPQFVLEIVDMIRNNGDGLESRLNMMSSRLSVYSITEIFEVLNTRRISGLRLFEWIWT 503
           N  P+ + EI+ +IR++   +E +LN+M+ RLSV S+TEIF VLN  R+S +R FEWI  
Sbjct: 200 NMSPKRISEIIKVIRSDEIDMEVKLNLMNLRLSVASVTEIFRVLNLERLSAMRFFEWISH 259

Query: 504 NNPLLRNNAKVCSLI 548
           +   L  N  +CSLI
Sbjct: 260 SRSGLSRNYDICSLI 274


>ref|XP_004243688.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Solanum lycopersicum]
          Length = 525

 Score = 66.6 bits (161), Expect = 4e-09
 Identities = 36/101 (35%), Positives = 61/101 (60%), Gaps = 5/101 (4%)
 Frame = +3

Query: 261 VESEVHNVANICSDQQKLDKRNN-----YPQFVLEIVDMIRNNGDGLESRLNMMSSRLSV 425
           ++SE   +   C+++  + K  N     Y + VLEIV++IR  G  +  +L +++S+LS 
Sbjct: 110 LQSEEKALKGSCTNEFTIKKSANPSVRVYSEEVLEIVEIIRGGGQNVRQQLILVASKLSF 169

Query: 426 YSITEIFEVLNTRRISGLRLFEWIWTNNPLLRNNAKVCSLI 548
             + EIF++LN +RISGL+ F W+  ++P    +A V SLI
Sbjct: 170 KCVVEIFDLLNEQRISGLKFFNWLRDSHPEFHRSAYVNSLI 210


>gb|EXC01127.1| hypothetical protein L484_025500 [Morus notabilis]
          Length = 502

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 31/67 (46%), Positives = 42/67 (62%)
 Frame = +3

Query: 348 EIVDMIRNNGDGLESRLNMMSSRLSVYSITEIFEVLNTRRISGLRLFEWIWTNNPLLRNN 527
           E+VDMIR N   LE  LN+    L+V  I  IFE LN+ ++S LR F W+  + P LR N
Sbjct: 122 EVVDMIRRNEISLECELNLSEVWLTVAYINRIFEALNSEKVSALRFFNWVRVSKPGLRRN 181

Query: 528 AKVCSLI 548
           + +CSL+
Sbjct: 182 SDICSLM 188


>gb|EOY17094.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
           cacao]
          Length = 494

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 28/68 (41%), Positives = 45/68 (66%)
 Frame = +3

Query: 345 LEIVDMIRNNGDGLESRLNMMSSRLSVYSITEIFEVLNTRRISGLRLFEWIWTNNPLLRN 524
           LE+V +IR+  + LES+L+ M+  LS  S+  IF +LN  ++S LR F WI  ++P   +
Sbjct: 119 LEVVSLIRSGQNDLESKLDGMNVSLSEASLNTIFRILNNEKVSALRFFYWIRESHPQFYH 178

Query: 525 NAKVCSLI 548
           N+ +CSL+
Sbjct: 179 NSDICSLV 186


>ref|XP_002325952.1| hypothetical protein POPTR_0019s10460g [Populus trichocarpa]
           gi|222862827|gb|EEF00334.1| hypothetical protein
           POPTR_0019s10460g [Populus trichocarpa]
          Length = 432

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 29/69 (42%), Positives = 45/69 (65%)
 Frame = +3

Query: 342 VLEIVDMIRNNGDGLESRLNMMSSRLSVYSITEIFEVLNTRRISGLRLFEWIWTNNPLLR 521
           V  I+D+I+ +   LE +L  +S +LS+ S+T +F VLN+ ++S LR F WI    P LR
Sbjct: 62  VAYIIDLIKRDEYDLEYKLGSLSVKLSIASVTLVFHVLNSEKVSALRFFRWIRHWQPELR 121

Query: 522 NNAKVCSLI 548
            N+ +CSL+
Sbjct: 122 CNSDICSLV 130


>ref|XP_006353779.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like isoform X1 [Solanum tuberosum]
           gi|565374458|ref|XP_006353780.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g09900-like isoform X2 [Solanum tuberosum]
           gi|565374460|ref|XP_006353781.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g09900-like isoform X3 [Solanum tuberosum]
          Length = 537

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 31/90 (34%), Positives = 54/90 (60%), Gaps = 5/90 (5%)
 Frame = +3

Query: 294 CSDQQKLDKRNN-----YPQFVLEIVDMIRNNGDGLESRLNMMSSRLSVYSITEIFEVLN 458
           C+D+  + K        Y + +LEI+++I+  G+ L  +L +++S+LS   +  IF++LN
Sbjct: 130 CTDELTIKKSTKPSASVYSEEILEIIEIIKGGGEDLRQQLILVASKLSFKCVIGIFDLLN 189

Query: 459 TRRISGLRLFEWIWTNNPLLRNNAKVCSLI 548
            +RISGL  F W+  ++P    +A V SLI
Sbjct: 190 EQRISGLNFFNWLRDSHPEFHCSAYVNSLI 219


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