BLASTX nr result

ID: Rehmannia22_contig00035116 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00035116
         (617 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN80359.1| hypothetical protein VITISV_002028 [Vitis vinifera]    62   3e-09
emb|CBI19420.3| unnamed protein product [Vitis vinifera]               62   3e-09
ref|XP_006362063.1| PREDICTED: transcription initiation factor T...    64   4e-08
ref|XP_004238100.1| PREDICTED: uncharacterized protein LOC101262...    64   4e-08
ref|XP_002283285.2| PREDICTED: uncharacterized protein LOC100252...    58   5e-08
ref|XP_006363920.1| PREDICTED: transcription initiation factor T...    62   1e-07
ref|XP_004970354.1| PREDICTED: mediator of RNA polymerase II tra...    60   6e-07
ref|XP_004970353.1| PREDICTED: mediator of RNA polymerase II tra...    60   6e-07
ref|XP_004970352.1| PREDICTED: mediator of RNA polymerase II tra...    60   6e-07
ref|XP_004970351.1| PREDICTED: mediator of RNA polymerase II tra...    60   6e-07
ref|XP_004970350.1| PREDICTED: mediator of RNA polymerase II tra...    60   6e-07
gb|ESW32892.1| hypothetical protein PHAVU_001G026300g [Phaseolus...    49   2e-06
gb|ESW32891.1| hypothetical protein PHAVU_001G026300g [Phaseolus...    49   2e-06
gb|EPS64696.1| hypothetical protein M569_10084, partial [Genlise...    57   3e-06

>emb|CAN80359.1| hypothetical protein VITISV_002028 [Vitis vinifera]
          Length = 906

 Score = 62.4 bits (150), Expect(3) = 3e-09
 Identities = 39/94 (41%), Positives = 56/94 (59%)
 Frame = +3

Query: 264 KTRYICFQKNEISKDSFVQHLKRIVGDQMLGLSLKKLQAQIARRNSQTAPSQFQSQHQAS 443
           +T Y   +KNEI K +FV+ ++ IVGDQML L++ KLQ       S T PSQFQ Q QAS
Sbjct: 206 RTLYAKLKKNEIPKLAFVRLMRGIVGDQMLKLAVMKLQ------QSPTGPSQFQLQSQAS 259

Query: 444 SMQLQISSSAQIITDLSNPASGGNKGKTKQIHQE 545
           ++Q  + + + I +  S+P S        Q+HQ+
Sbjct: 260 ALQQHLKTPSSIGSQFSDPHS------FSQLHQK 287



 Score = 22.7 bits (47), Expect(3) = 3e-09
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +2

Query: 164 NPQSDSQMHDLQYMSNQQSMEMRSNNQQPQSEGKNK 271
           NP    Q  +LQ ++NQQ +   +  Q   S  +NK
Sbjct: 150 NPDKQHQFPELQKINNQQGI---ATEQASNSGNQNK 182



 Score = 21.6 bits (44), Expect(3) = 3e-09
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +2

Query: 521 ENQADSSGMQVSQFQLS 571
           E Q+DS GMQ SQ   S
Sbjct: 325 ERQSDSHGMQGSQMSSS 341


>emb|CBI19420.3| unnamed protein product [Vitis vinifera]
          Length = 882

 Score = 62.4 bits (150), Expect(3) = 3e-09
 Identities = 39/94 (41%), Positives = 56/94 (59%)
 Frame = +3

Query: 264 KTRYICFQKNEISKDSFVQHLKRIVGDQMLGLSLKKLQAQIARRNSQTAPSQFQSQHQAS 443
           +T Y   +KNEI K +FV+ ++ IVGDQML L++ KLQ       S T PSQFQ Q QAS
Sbjct: 222 RTLYAKLKKNEIPKLAFVRLMRGIVGDQMLKLAVMKLQ------QSPTGPSQFQLQSQAS 275

Query: 444 SMQLQISSSAQIITDLSNPASGGNKGKTKQIHQE 545
           ++Q  + + + I +  S+P S        Q+HQ+
Sbjct: 276 ALQQHLKTPSSIGSQFSDPHS------FSQLHQK 303



 Score = 22.7 bits (47), Expect(3) = 3e-09
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +2

Query: 164 NPQSDSQMHDLQYMSNQQSMEMRSNNQQPQSEGKNK 271
           NP    Q  +LQ ++NQQ +   +  Q   S  +NK
Sbjct: 166 NPDKQHQFPELQKINNQQGI---ATEQASNSGNQNK 198



 Score = 21.6 bits (44), Expect(3) = 3e-09
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +2

Query: 521 ENQADSSGMQVSQFQLS 571
           E Q+DS GMQ SQ   S
Sbjct: 341 ERQSDSHGMQGSQMSSS 357


>ref|XP_006362063.1| PREDICTED: transcription initiation factor TFIID subunit 4b-like
           [Solanum tuberosum]
          Length = 934

 Score = 63.5 bits (153), Expect = 4e-08
 Identities = 37/90 (41%), Positives = 56/90 (62%), Gaps = 10/90 (11%)
 Frame = +3

Query: 264 KTRYICFQKNEISKDSFVQHLKRIVGDQMLGLSLKKLQAQIARRNSQTAPSQF------Q 425
           +T Y+  +KNEISK+SFV++++ I+GDQML +++ K Q+Q A +NSQ+ P QF      Q
Sbjct: 238 QTLYVKLKKNEISKESFVRNMRSIIGDQMLKMAVYKFQSQ-ASKNSQSVPGQFPQSQASQ 296

Query: 426 SQHQA----SSMQLQISSSAQIITDLSNPA 503
            QH       S  + I S AQ + ++ N A
Sbjct: 297 QQHSLMPADDSSNMAIESKAQKLHEVENQA 326


>ref|XP_004238100.1| PREDICTED: uncharacterized protein LOC101262209 [Solanum
           lycopersicum]
          Length = 934

 Score = 63.5 bits (153), Expect = 4e-08
 Identities = 37/90 (41%), Positives = 56/90 (62%), Gaps = 10/90 (11%)
 Frame = +3

Query: 264 KTRYICFQKNEISKDSFVQHLKRIVGDQMLGLSLKKLQAQIARRNSQTAPSQF------Q 425
           +T Y+  +KNEISK+SFV++++ I+GDQML +++ K Q+Q A +NSQ+ P QF      Q
Sbjct: 238 QTLYVKLKKNEISKESFVRNMRSIIGDQMLKMAVYKFQSQ-ASKNSQSVPGQFPQSQASQ 296

Query: 426 SQHQA----SSMQLQISSSAQIITDLSNPA 503
            QH       S  + I S AQ + ++ N A
Sbjct: 297 QQHSLMPADDSSNMAIESKAQKLHEVENQA 326


>ref|XP_002283285.2| PREDICTED: uncharacterized protein LOC100252311 [Vitis vinifera]
          Length = 922

 Score = 58.2 bits (139), Expect(3) = 5e-08
 Identities = 38/104 (36%), Positives = 58/104 (55%), Gaps = 10/104 (9%)
 Frame = +3

Query: 264 KTRYICFQKNEISKDSFVQHLKRIVGDQMLGLSLKKLQAQIARRNSQTAPSQFQSQHQAS 443
           +T Y   +KNEI K +FV+ ++ IVGDQML L+       +   N QT PSQFQ Q QAS
Sbjct: 222 RTLYAKLKKNEIPKLAFVRLMRGIVGDQMLKLA-------VDAWNYQTGPSQFQLQSQAS 274

Query: 444 SMQLQI----------SSSAQIITDLSNPASGGNKGKTKQIHQE 545
           ++Q  +          SS+ ++ TD S P +  N  K +++ ++
Sbjct: 275 ALQQHLKTPSNSSHMPSSAMKVQTDSSYPTTETNSQKPREMERQ 318



 Score = 22.7 bits (47), Expect(3) = 5e-08
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +2

Query: 164 NPQSDSQMHDLQYMSNQQSMEMRSNNQQPQSEGKNK 271
           NP    Q  +LQ ++NQQ +   +  Q   S  +NK
Sbjct: 166 NPDKQHQFPELQKINNQQGI---ATEQASNSGNQNK 198



 Score = 21.6 bits (44), Expect(3) = 5e-08
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +2

Query: 521 ENQADSSGMQVSQFQLS 571
           E Q+DS GMQ SQ   S
Sbjct: 316 ERQSDSHGMQGSQMSSS 332


>ref|XP_006363920.1| PREDICTED: transcription initiation factor TFIID subunit 4b-like
           [Solanum tuberosum]
          Length = 537

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 39/93 (41%), Positives = 59/93 (63%)
 Frame = +3

Query: 264 KTRYICFQKNEISKDSFVQHLKRIVGDQMLGLSLKKLQAQIARRNSQTAPSQFQSQHQAS 443
           +T Y+  +KNEISK+SFV++++ I+GDQML +++ K Q+Q A +NSQ+ P QF  Q QAS
Sbjct: 220 QTLYVKLKKNEISKESFVRNMRSIIGDQMLKMAVYKFQSQ-ASKNSQSVPGQF-PQSQAS 277

Query: 444 SMQLQISSSAQIITDLSNPASGGNKGKTKQIHQ 542
             Q     S     D SN A    + K +++H+
Sbjct: 278 QQQ----HSLMPADDSSNMAI---ESKAQKLHE 303


>ref|XP_004970354.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           15-like isoform X5 [Setaria italica]
           gi|514783487|ref|XP_004970355.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 15-like isoform
           X6 [Setaria italica]
          Length = 802

 Score = 59.7 bits (143), Expect = 6e-07
 Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 3/94 (3%)
 Frame = +3

Query: 264 KTRYICFQKNEISKDSFVQHLKRIVGDQMLGLSLKKLQAQI---ARRNSQTAPSQFQSQH 434
           +T +   ++NE+ KD F++ ++ IVGDQML  +  K+  Q+   A+RN+Q  PSQ     
Sbjct: 152 QTVWAKLRRNEVHKDDFLRVIRNIVGDQMLKQAAHKVFLQMQAQAQRNNQANPSQHSLFS 211

Query: 435 QASSMQLQISSSAQIITDLSNPASGGNKGKTKQI 536
           QAS+ Q+  S SAQ+      P    N+G+  Q+
Sbjct: 212 QASTQQMPSSGSAQLHDQKVRPPGPSNQGQKNQV 245


>ref|XP_004970353.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           15-like isoform X4 [Setaria italica]
          Length = 815

 Score = 59.7 bits (143), Expect = 6e-07
 Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 3/94 (3%)
 Frame = +3

Query: 264 KTRYICFQKNEISKDSFVQHLKRIVGDQMLGLSLKKLQAQI---ARRNSQTAPSQFQSQH 434
           +T +   ++NE+ KD F++ ++ IVGDQML  +  K+  Q+   A+RN+Q  PSQ     
Sbjct: 192 QTVWAKLRRNEVHKDDFLRVIRNIVGDQMLKQAAHKVFLQMQAQAQRNNQANPSQHSLFS 251

Query: 435 QASSMQLQISSSAQIITDLSNPASGGNKGKTKQI 536
           QAS+ Q+  S SAQ+      P    N+G+  Q+
Sbjct: 252 QASTQQMPSSGSAQLHDQKVRPPGPSNQGQKNQV 285


>ref|XP_004970352.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           15-like isoform X3 [Setaria italica]
          Length = 816

 Score = 59.7 bits (143), Expect = 6e-07
 Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 3/94 (3%)
 Frame = +3

Query: 264 KTRYICFQKNEISKDSFVQHLKRIVGDQMLGLSLKKLQAQI---ARRNSQTAPSQFQSQH 434
           +T +   ++NE+ KD F++ ++ IVGDQML  +  K+  Q+   A+RN+Q  PSQ     
Sbjct: 192 QTVWAKLRRNEVHKDDFLRVIRNIVGDQMLKQAAHKVFLQMQAQAQRNNQANPSQHSLFS 251

Query: 435 QASSMQLQISSSAQIITDLSNPASGGNKGKTKQI 536
           QAS+ Q+  S SAQ+      P    N+G+  Q+
Sbjct: 252 QASTQQMPSSGSAQLHDQKVRPPGPSNQGQKNQV 285


>ref|XP_004970351.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           15-like isoform X2 [Setaria italica]
          Length = 841

 Score = 59.7 bits (143), Expect = 6e-07
 Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 3/94 (3%)
 Frame = +3

Query: 264 KTRYICFQKNEISKDSFVQHLKRIVGDQMLGLSLKKLQAQI---ARRNSQTAPSQFQSQH 434
           +T +   ++NE+ KD F++ ++ IVGDQML  +  K+  Q+   A+RN+Q  PSQ     
Sbjct: 192 QTVWAKLRRNEVHKDDFLRVIRNIVGDQMLKQAAHKVFLQMQAQAQRNNQANPSQHSLFS 251

Query: 435 QASSMQLQISSSAQIITDLSNPASGGNKGKTKQI 536
           QAS+ Q+  S SAQ+      P    N+G+  Q+
Sbjct: 252 QASTQQMPSSGSAQLHDQKVRPPGPSNQGQKNQV 285


>ref|XP_004970350.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           15-like isoform X1 [Setaria italica]
          Length = 842

 Score = 59.7 bits (143), Expect = 6e-07
 Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 3/94 (3%)
 Frame = +3

Query: 264 KTRYICFQKNEISKDSFVQHLKRIVGDQMLGLSLKKLQAQI---ARRNSQTAPSQFQSQH 434
           +T +   ++NE+ KD F++ ++ IVGDQML  +  K+  Q+   A+RN+Q  PSQ     
Sbjct: 192 QTVWAKLRRNEVHKDDFLRVIRNIVGDQMLKQAAHKVFLQMQAQAQRNNQANPSQHSLFS 251

Query: 435 QASSMQLQISSSAQIITDLSNPASGGNKGKTKQI 536
           QAS+ Q+  S SAQ+      P    N+G+  Q+
Sbjct: 252 QASTQQMPSSGSAQLHDQKVRPPGPSNQGQKNQV 285


>gb|ESW32892.1| hypothetical protein PHAVU_001G026300g [Phaseolus vulgaris]
          Length = 935

 Score = 49.3 bits (116), Expect(2) = 2e-06
 Identities = 31/85 (36%), Positives = 48/85 (56%)
 Frame = +3

Query: 234 QIINSLSQKGKTRYICFQKNEISKDSFVQHLKRIVGDQMLGLSLKKLQAQIARRNSQTAP 413
           Q+    + + +T +   +K+EI KDSFV+ +K IVGDQML L+L K+Q Q   R++Q + 
Sbjct: 210 QLAKDRAMQLQTLFAKLKKDEIPKDSFVRLMKGIVGDQMLRLALAKVQMQPQARSNQASA 269

Query: 414 SQFQSQHQASSMQLQISSSAQIITD 488
            Q     Q       +SS A+ + D
Sbjct: 270 GQ-----QLPVRMPTVSSGARQLND 289



 Score = 28.5 bits (62), Expect(2) = 2e-06
 Identities = 15/32 (46%), Positives = 21/32 (65%)
 Frame = +2

Query: 164 NPQSDSQMHDLQYMSNQQSMEMRSNNQQPQSE 259
           NP S+SQ   LQ MSNQQ+    + ++QP S+
Sbjct: 164 NPSSESQYAKLQQMSNQQA----TVSEQPSSQ 191


>gb|ESW32891.1| hypothetical protein PHAVU_001G026300g [Phaseolus vulgaris]
          Length = 931

 Score = 49.3 bits (116), Expect(2) = 2e-06
 Identities = 31/85 (36%), Positives = 48/85 (56%)
 Frame = +3

Query: 234 QIINSLSQKGKTRYICFQKNEISKDSFVQHLKRIVGDQMLGLSLKKLQAQIARRNSQTAP 413
           Q+    + + +T +   +K+EI KDSFV+ +K IVGDQML L+L K+Q Q   R++Q + 
Sbjct: 210 QLAKDRAMQLQTLFAKLKKDEIPKDSFVRLMKGIVGDQMLRLALAKVQMQPQARSNQASA 269

Query: 414 SQFQSQHQASSMQLQISSSAQIITD 488
            Q     Q       +SS A+ + D
Sbjct: 270 GQ-----QLPVRMPTVSSGARQLND 289



 Score = 28.5 bits (62), Expect(2) = 2e-06
 Identities = 15/32 (46%), Positives = 21/32 (65%)
 Frame = +2

Query: 164 NPQSDSQMHDLQYMSNQQSMEMRSNNQQPQSE 259
           NP S+SQ   LQ MSNQQ+    + ++QP S+
Sbjct: 164 NPSSESQYAKLQQMSNQQA----TVSEQPSSQ 191


>gb|EPS64696.1| hypothetical protein M569_10084, partial [Genlisea aurea]
          Length = 633

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 32/79 (40%), Positives = 51/79 (64%)
 Frame = +3

Query: 267 TRYICFQKNEISKDSFVQHLKRIVGDQMLGLSLKKLQAQIARRNSQTAPSQFQSQHQASS 446
           T Y+  +++EISKD+FV++++ IVGDQML +++ KLQ Q +  N+   P    SQ Q+  
Sbjct: 20  TLYLKLKQSEISKDAFVRNMRSIVGDQMLKMAVYKLQTQKSHHNAARGPPHGFSQFQS-- 77

Query: 447 MQLQISSSAQIITDLSNPA 503
             LQI S+A++ T    P+
Sbjct: 78  -PLQIHSNAKMATGDGKPS 95


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