BLASTX nr result
ID: Rehmannia22_contig00034846
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00034846
(343 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM08751.1|AC025098_18 Putative copia-type polyprotein [Oryza... 66 5e-09
gb|AAG46116.1|AC073166_14 putative copia-like retrotransposon po... 64 2e-08
gb|ABB47941.2| retrotransposon protein, putative, unclassified [... 64 2e-08
gb|AAG13591.2|AC051633_7 putative gag/pol polyprotein [Oryza sat... 64 2e-08
ref|XP_002445564.1| hypothetical protein SORBIDRAFT_07g021665 [S... 63 4e-08
emb|CAB43904.1| putative protein [Arabidopsis thaliana] gi|72697... 61 2e-07
ref|XP_002466349.1| hypothetical protein SORBIDRAFT_01g006185 [S... 59 7e-07
dbj|BAB10876.1| polyprotein [Arabidopsis thaliana] 59 9e-07
gb|AAG12528.1|AC015446_9 Hypothetical Protein [Arabidopsis thali... 55 7e-06
emb|CAB40035.1| retrotransposon like protein [Arabidopsis thalia... 55 1e-05
>gb|AAM08751.1|AC025098_18 Putative copia-type polyprotein [Oryza sativa Japonica Group]
Length = 1803
Score = 65.9 bits (159), Expect = 5e-09
Identities = 30/64 (46%), Positives = 44/64 (68%)
Frame = -1
Query: 196 PTESATSISPSQSNIPSHPMITRSKAGIQKPNPKYMLTTTTSSLPHVPTSLSIAMKDPQW 17
P S + SP+ ++ P H M TR++AGI KPNP+Y + T TS+L P+S+ +A++DP W
Sbjct: 849 PPPSPETSSPASASPPRHAMTTRARAGISKPNPRYAM-TATSTLSPTPSSVRVALRDPNW 907
Query: 16 RFAM 5
R AM
Sbjct: 908 RAAM 911
>gb|AAG46116.1|AC073166_14 putative copia-like retrotransposon polyprotein [Oryza sativa
Japonica Group]
Length = 1302
Score = 64.3 bits (155), Expect = 2e-08
Identities = 30/64 (46%), Positives = 43/64 (67%)
Frame = -1
Query: 196 PTESATSISPSQSNIPSHPMITRSKAGIQKPNPKYMLTTTTSSLPHVPTSLSIAMKDPQW 17
P S + SP+ ++ P H M TR++AGI KPNP+Y + T TS+L P+S+ A++DP W
Sbjct: 751 PPPSPETSSPASASPPRHAMTTRARAGISKPNPRYAM-TATSTLSPTPSSVRAALRDPNW 809
Query: 16 RFAM 5
R AM
Sbjct: 810 RAAM 813
>gb|ABB47941.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1414
Score = 64.3 bits (155), Expect = 2e-08
Identities = 30/64 (46%), Positives = 43/64 (67%)
Frame = -1
Query: 196 PTESATSISPSQSNIPSHPMITRSKAGIQKPNPKYMLTTTTSSLPHVPTSLSIAMKDPQW 17
P S + SP+ ++ P H M TR++AGI KPNP+Y + T TS+L P+S+ A++DP W
Sbjct: 849 PPPSPETSSPASASPPRHAMTTRARAGISKPNPRYAM-TATSTLSPTPSSVRAALRDPNW 907
Query: 16 RFAM 5
R AM
Sbjct: 908 RAAM 911
>gb|AAG13591.2|AC051633_7 putative gag/pol polyprotein [Oryza sativa Japonica Group]
Length = 1417
Score = 64.3 bits (155), Expect = 2e-08
Identities = 30/64 (46%), Positives = 43/64 (67%)
Frame = -1
Query: 196 PTESATSISPSQSNIPSHPMITRSKAGIQKPNPKYMLTTTTSSLPHVPTSLSIAMKDPQW 17
P S + SP+ ++ P H M TR++AGI KPNP+Y + T TS+L P+S+ A++DP W
Sbjct: 849 PPPSPETSSPASASPPRHAMTTRARAGISKPNPRYAM-TATSTLSPTPSSVRAALRDPNW 907
Query: 16 RFAM 5
R AM
Sbjct: 908 RAAM 911
>ref|XP_002445564.1| hypothetical protein SORBIDRAFT_07g021665 [Sorghum bicolor]
gi|241941914|gb|EES15059.1| hypothetical protein
SORBIDRAFT_07g021665 [Sorghum bicolor]
Length = 599
Score = 63.2 bits (152), Expect = 4e-08
Identities = 30/64 (46%), Positives = 40/64 (62%)
Frame = -1
Query: 196 PTESATSISPSQSNIPSHPMITRSKAGIQKPNPKYMLTTTTSSLPHVPTSLSIAMKDPQW 17
P + T+ +P +P HPMITR + GI+ PNPKY TTSS PTS+ A++DP+W
Sbjct: 89 PASTPTTSAPPHP-VPQHPMITRGRDGIRMPNPKYAHVATTSSPTAPPTSVRAALRDPEW 147
Query: 16 RFAM 5
AM
Sbjct: 148 TAAM 151
>emb|CAB43904.1| putative protein [Arabidopsis thaliana] gi|7269745|emb|CAB81478.1|
putative protein [Arabidopsis thaliana]
Length = 1415
Score = 60.8 bits (146), Expect = 2e-07
Identities = 30/52 (57%), Positives = 37/52 (71%)
Frame = -1
Query: 160 SNIPSHPMITRSKAGIQKPNPKYMLTTTTSSLPHVPTSLSIAMKDPQWRFAM 5
+N SHPMITRSK+GI KPNPKY + T S+ P VP ++ A+KDP W AM
Sbjct: 844 TNDQSHPMITRSKSGIFKPNPKYAMFTVKSNYP-VPKTVKTALKDPGWTDAM 894
>ref|XP_002466349.1| hypothetical protein SORBIDRAFT_01g006185 [Sorghum bicolor]
gi|241920203|gb|EER93347.1| hypothetical protein
SORBIDRAFT_01g006185 [Sorghum bicolor]
Length = 557
Score = 58.9 bits (141), Expect = 7e-07
Identities = 35/111 (31%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Frame = -1
Query: 316 NVSPPSSPALVSNRRPMFPVPIFDQVXXXXXXXXXXXTLHPTESATSIS-------PSQS 158
+ +PPS PA S+ VP Q T S++ + P+ +
Sbjct: 37 SAAPPSQPATSSSTHDASTVP---QAVPLHGASTSTPATASTSSSSPVQAPASPRGPAAA 93
Query: 157 NIPSHPMITRSKAGIQKPNPKYMLTTTTSSLPHVPTSLSIAMKDPQWRFAM 5
HPM+TR++AGI KPNPKY+ TT + PT + ++DP+W AM
Sbjct: 94 PPQRHPMVTRAQAGIHKPNPKYVHVATTPAPAPPPTGVRAVLRDPEWLAAM 144
>dbj|BAB10876.1| polyprotein [Arabidopsis thaliana]
Length = 1429
Score = 58.5 bits (140), Expect = 9e-07
Identities = 34/77 (44%), Positives = 45/77 (58%), Gaps = 12/77 (15%)
Frame = -1
Query: 196 PTESATSISPSQSNIPS-----------HPMITRSKAGIQKPNPKYMLTTT-TSSLPHVP 53
PT S SP+ S +P HPM TR+K I KP K+ LTT+ TSS P +P
Sbjct: 862 PTTSVHQHSPTPSPLPQNPPLPPPPQNDHPMRTRAKNQITKPKTKFNLTTSLTSSKPTIP 921
Query: 52 TSLSIAMKDPQWRFAMT 2
T+++ A+KDP WR AM+
Sbjct: 922 TTVAQALKDPNWRNAMS 938
>gb|AAG12528.1|AC015446_9 Hypothetical Protein [Arabidopsis thaliana]
Length = 690
Score = 55.5 bits (132), Expect = 7e-06
Identities = 29/64 (45%), Positives = 36/64 (56%)
Frame = -1
Query: 196 PTESATSISPSQSNIPSHPMITRSKAGIQKPNPKYMLTTTTSSLPHVPTSLSIAMKDPQW 17
P +A I P+H M+TRSKAGI KPNP+Y L S P P +++ AMKD W
Sbjct: 172 PKSTAPCIEAPVEKQPTHTMVTRSKAGIHKPNPRYALMLHKVSYPE-PKTVTAAMKDEGW 230
Query: 16 RFAM 5
AM
Sbjct: 231 NNAM 234
>emb|CAB40035.1| retrotransposon like protein [Arabidopsis thaliana]
gi|7267767|emb|CAB81170.1| retrotransposon like protein
[Arabidopsis thaliana]
Length = 1515
Score = 55.1 bits (131), Expect = 1e-05
Identities = 30/61 (49%), Positives = 39/61 (63%)
Frame = -1
Query: 187 SATSISPSQSNIPSHPMITRSKAGIQKPNPKYMLTTTTSSLPHVPTSLSIAMKDPQWRFA 8
S+T+ +P S HPMITR+K+GI KPNPKY L + S+ P P S+ A+KD W A
Sbjct: 881 SSTTAAPETS----HPMITRAKSGITKPNPKYALFSVKSNYPE-PKSVKEALKDEGWTNA 935
Query: 7 M 5
M
Sbjct: 936 M 936