BLASTX nr result
ID: Rehmannia22_contig00034841
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00034841
(948 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006366006.1| PREDICTED: pentatricopeptide repeat-containi... 425 e-116
emb|CBI28908.3| unnamed protein product [Vitis vinifera] 423 e-116
ref|XP_004248470.1| PREDICTED: pentatricopeptide repeat-containi... 423 e-116
ref|XP_006371589.1| pentatricopeptide repeat-containing family p... 422 e-116
ref|XP_006447324.1| hypothetical protein CICLE_v10014552mg [Citr... 421 e-115
ref|XP_002329409.1| predicted protein [Populus trichocarpa] 420 e-115
gb|EMJ18185.1| hypothetical protein PRUPE_ppa002596mg [Prunus pe... 419 e-114
ref|XP_004306013.1| PREDICTED: pentatricopeptide repeat-containi... 416 e-114
gb|EOY09328.1| Pentatricopeptide repeat (PPR-like) superfamily p... 410 e-112
gb|EXB62273.1| hypothetical protein L484_022161 [Morus notabilis] 406 e-111
ref|XP_002532772.1| pentatricopeptide repeat-containing protein,... 405 e-111
ref|XP_002892169.1| pentatricopeptide repeat-containing protein ... 402 e-109
ref|XP_004155527.1| PREDICTED: pentatricopeptide repeat-containi... 400 e-109
ref|XP_004137016.1| PREDICTED: pentatricopeptide repeat-containi... 400 e-109
ref|XP_006306944.1| hypothetical protein CARUB_v10008524mg [Caps... 398 e-108
ref|XP_006418224.1| hypothetical protein EUTSA_v10007014mg [Eutr... 396 e-108
ref|NP_171855.1| pentatricopeptide repeat-containing protein [Ar... 395 e-107
dbj|BAF01006.1| hypothetical protein [Arabidopsis thaliana] 395 e-107
gb|ESW05301.1| hypothetical protein PHAVU_011G168600g [Phaseolus... 394 e-107
ref|XP_004513160.1| PREDICTED: pentatricopeptide repeat-containi... 392 e-106
>ref|XP_006366006.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like isoform X1 [Solanum tuberosum]
gi|565401005|ref|XP_006366007.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like isoform X2 [Solanum tuberosum]
gi|565401007|ref|XP_006366008.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like isoform X3 [Solanum tuberosum]
gi|565401009|ref|XP_006366009.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like isoform X4 [Solanum tuberosum]
gi|565401011|ref|XP_006366010.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like isoform X5 [Solanum tuberosum]
Length = 711
Score = 425 bits (1092), Expect = e-116
Identities = 199/249 (79%), Positives = 231/249 (92%)
Frame = +3
Query: 3 LCKSGRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRD 182
LCKS RL+EA+QW EYCK+NNVA+N + YSSLIDGLGKAGR++EA +LFEEM EKGC RD
Sbjct: 463 LCKSERLDEAMQWLEYCKKNNVAINAMFYSSLIDGLGKAGRVDEARELFEEMAEKGCTRD 522
Query: 183 SYCYNVLIDALAKNGKVDEALAVFKKMEDEGCDQTVYTFTILINGLFKEHRNEEALKLWD 362
SYCYN LIDALAKNGK+DEAL +FK+MEDEGCD+TVYT+TILI+G+FKEH+NEEALKLW
Sbjct: 523 SYCYNALIDALAKNGKIDEALVLFKRMEDEGCDETVYTYTILISGMFKEHQNEEALKLWH 582
Query: 363 LMIDKGITPTAASCRALATGLCLSGKVARACKILDELAPMGIVLETAFEDMMNVLCKAGR 542
+MIDKGITP AAS RAL+TGLC SGKVARACKILDELAPMG++LETAFEDM+NVLCKAGR
Sbjct: 583 MMIDKGITPNAASFRALSTGLCHSGKVARACKILDELAPMGVILETAFEDMINVLCKAGR 642
Query: 543 IAEACKLADGVIDRGREIPGRVRTIMINSLRKAGNADLAMKLMHSKIGIGYHRMRSVKKR 722
I EACKLADG++DRGREIPG++RT++IN+LRK GNAD+A+KLMHSKIGIGY RM S+K+R
Sbjct: 643 IKEACKLADGIVDRGREIPGKIRTVLINALRKTGNADMAVKLMHSKIGIGYDRMGSIKRR 702
Query: 723 VKFRTLVES 749
VKFR LVES
Sbjct: 703 VKFRVLVES 711
Score = 102 bits (254), Expect = 2e-19
Identities = 64/227 (28%), Positives = 116/227 (51%), Gaps = 1/227 (0%)
Frame = +3
Query: 15 GRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCY 194
G + L + + ++ + Y+ +I G K G++ E +FE M++KG + Y
Sbjct: 362 GNFDSCLGLYHEMEEKDLDIPPHAYTLVIGGFCKMGKVLEGFTVFENMIKKGIRPNLSIY 421
Query: 195 NVLIDALAKNGKVDEALAVFKKMEDEGCDQTVYTFTILINGLFKEHRNEEALKLWDLMID 374
LID+ K+G +DEA+ +F +M++EG + TF +++NGL K R +EA++ +
Sbjct: 422 TALIDSYMKHGNLDEAMRLFDRMKNEGFEPDEVTFGVIVNGLCKSERLDEAMQWLEYCKK 481
Query: 375 KGITPTAASCRALATGLCLSGKVARACKILDELAPMGIVLET-AFEDMMNVLCKAGRIAE 551
+ A +L GL +G+V A ++ +E+A G ++ + +++ L K G+I E
Sbjct: 482 NNVAINAMFYSSLIDGLGKAGRVDEARELFEEMAEKGCTRDSYCYNALIDALAKNGKIDE 541
Query: 552 ACKLADGVIDRGREIPGRVRTIMINSLRKAGNADLAMKLMHSKIGIG 692
A L + D G + TI+I+ + K + A+KL H I G
Sbjct: 542 ALVLFKRMEDEGCDETVYTYTILISGMFKEHQNEEALKLWHMMIDKG 588
Score = 89.4 bits (220), Expect = 2e-15
Identities = 61/223 (27%), Positives = 106/223 (47%), Gaps = 1/223 (0%)
Frame = +3
Query: 3 LCKSGRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRD 182
L S +E A + FE + V ++V Y+++I G ++G+L++A + F +M + D
Sbjct: 288 LVNSMFIESAERVFEVMESGKVNPDIVTYNTMIKGYCRSGKLQKAMEKFRDMEVRKVEPD 347
Query: 183 SYCYNVLIDALAKNGKVDEALAVFKKMEDEGCDQTVYTFTILINGLFKEHRNEEALKLWD 362
Y L+ A G D L ++ +ME++ D + +T++I G K + E +++
Sbjct: 348 KITYMTLMQACYAEGNFDSCLGLYHEMEEKDLDIPPHAYTLVIGGFCKMGKVLEGFTVFE 407
Query: 363 LMIDKGITPTAASCRALATGLCLSGKVARACKILDELAPMGIVL-ETAFEDMMNVLCKAG 539
MI KGI P + AL G + A ++ D + G E F ++N LCK+
Sbjct: 408 NMIKKGIRPNLSIYTALIDSYMKHGNLDEAMRLFDRMKNEGFEPDEVTFGVIVNGLCKSE 467
Query: 540 RIAEACKLADGVIDRGREIPGRVRTIMINSLRKAGNADLAMKL 668
R+ EA + + I + +I+ L KAG D A +L
Sbjct: 468 RLDEAMQWLEYCKKNNVAINAMFYSSLIDGLGKAGRVDEAREL 510
Score = 77.0 bits (188), Expect = 1e-11
Identities = 59/256 (23%), Positives = 114/256 (44%), Gaps = 37/256 (14%)
Frame = +3
Query: 12 SGRLEEALQWFEYC-KRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSY 188
+G+ + A ++F + K+ A N Y L+ L + L+ + +F E KG +
Sbjct: 185 TGKPDIAFRFFYWAGKQKGYAHNCECYVFLVKILSASRELDRIKHVFSEFKHKGFLMNVA 244
Query: 189 CYNVLIDALAKNGKVDEALAVFKKMEDEGCDQTVYTFTILINGLFKEHRNEEALKLWDLM 368
N LI + + G V+E L V+++M++ G + ++YT+ L+NGL E A +++++M
Sbjct: 245 AVNSLIRSFGELGMVEELLFVWRQMKENGIEPSLYTYNFLMNGLVNSMFIESAERVFEVM 304
Query: 369 IDKGITPTAASCRALATGLCLSGKVARACKILDEL------------------------- 473
+ P + + G C SGK+ +A + ++
Sbjct: 305 ESGKVNPDIVTYNTMIKGYCRSGKLQKAMEKFRDMEVRKVEPDKITYMTLMQACYAEGNF 364
Query: 474 -APMGIVLETAFEDM----------MNVLCKAGRIAEACKLADGVIDRGREIPGRVRTIM 620
+ +G+ E +D+ + CK G++ E + + +I +G + T +
Sbjct: 365 DSCLGLYHEMEEKDLDIPPHAYTLVIGGFCKMGKVLEGFTVFENMIKKGIRPNLSIYTAL 424
Query: 621 INSLRKAGNADLAMKL 668
I+S K GN D AM+L
Sbjct: 425 IDSYMKHGNLDEAMRL 440
Score = 76.6 bits (187), Expect = 1e-11
Identities = 54/218 (24%), Positives = 100/218 (45%), Gaps = 1/218 (0%)
Frame = +3
Query: 15 GRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCY 194
G +EE L + K N + ++ Y+ L++GL + +E AE++FE M D Y
Sbjct: 257 GMVEELLFVWRQMKENGIEPSLYTYNFLMNGLVNSMFIESAERVFEVMESGKVNPDIVTY 316
Query: 195 NVLIDALAKNGKVDEALAVFKKMEDEGCDQTVYTFTILINGLFKEHRNEEALKLWDLMID 374
N +I ++GK+ +A+ F+ ME + T+ L+ + E + L L+ M +
Sbjct: 317 NTMIKGYCRSGKLQKAMEKFRDMEVRKVEPDKITYMTLMQACYAEGNFDSCLGLYHEMEE 376
Query: 375 KGITPTAASCRALATGLCLSGKVARACKILDELAPMGIVLE-TAFEDMMNVLCKAGRIAE 551
K + + + G C GKV + + + GI + + +++ K G + E
Sbjct: 377 KDLDIPPHAYTLVIGGFCKMGKVLEGFTVFENMIKKGIRPNLSIYTALIDSYMKHGNLDE 436
Query: 552 ACKLADGVIDRGREIPGRVRTIMINSLRKAGNADLAMK 665
A +L D + + G E +++N L K+ D AM+
Sbjct: 437 AMRLFDRMKNEGFEPDEVTFGVIVNGLCKSERLDEAMQ 474
>emb|CBI28908.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 423 bits (1088), Expect = e-116
Identities = 201/249 (80%), Positives = 232/249 (93%)
Frame = +3
Query: 3 LCKSGRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRD 182
LCKSGRL+EA+++FE+CK N VA+N + YSSLIDGLGKAGR++EAEK FEEMVE+GCP+D
Sbjct: 410 LCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLIDGLGKAGRVDEAEKFFEEMVERGCPQD 469
Query: 183 SYCYNVLIDALAKNGKVDEALAVFKKMEDEGCDQTVYTFTILINGLFKEHRNEEALKLWD 362
SYCYN LIDALAK+GK++EAL +FK+ME EGCDQTVYT+TILI+GLFKEHRNEEALKLWD
Sbjct: 470 SYCYNALIDALAKSGKMEEALVLFKRMEKEGCDQTVYTYTILISGLFKEHRNEEALKLWD 529
Query: 363 LMIDKGITPTAASCRALATGLCLSGKVARACKILDELAPMGIVLETAFEDMMNVLCKAGR 542
LMIDKGITPT AS RAL+ GLCLSGKVARACKILDELAPMG++ ETAFEDM+NVLCKAGR
Sbjct: 530 LMIDKGITPTTASFRALSVGLCLSGKVARACKILDELAPMGVIPETAFEDMINVLCKAGR 589
Query: 543 IAEACKLADGVIDRGREIPGRVRTIMINSLRKAGNADLAMKLMHSKIGIGYHRMRSVKKR 722
+ACKLADG++DRGRE+PGRVRTI+IN+LRKAGNADLAMKLMHSKIGIGY RM S+K+R
Sbjct: 590 TEQACKLADGIVDRGREVPGRVRTILINALRKAGNADLAMKLMHSKIGIGYDRMGSIKRR 649
Query: 723 VKFRTLVES 749
VKFR LV+S
Sbjct: 650 VKFRVLVDS 658
Score = 107 bits (267), Expect = 7e-21
Identities = 68/227 (29%), Positives = 115/227 (50%), Gaps = 1/227 (0%)
Frame = +3
Query: 15 GRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCY 194
G + L ++ + + + YS +I GL K GR E +FE M +KGC + Y
Sbjct: 309 GNFDSCLHLYQEMEERGLEIPPHAYSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIY 368
Query: 195 NVLIDALAKNGKVDEALAVFKKMEDEGCDQTVYTFTILINGLFKEHRNEEALKLWDLMID 374
LIDA KNG V+EA+ +F++M+ EG + T+ +++NGL K R +EA++ ++ D
Sbjct: 369 TALIDAYGKNGNVNEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKD 428
Query: 375 KGITPTAASCRALATGLCLSGKVARACKILDELAPMGIVLET-AFEDMMNVLCKAGRIAE 551
+ A +L GL +G+V A K +E+ G ++ + +++ L K+G++ E
Sbjct: 429 NEVAVNAMFYSSLIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEE 488
Query: 552 ACKLADGVIDRGREIPGRVRTIMINSLRKAGNADLAMKLMHSKIGIG 692
A L + G + TI+I+ L K + A+KL I G
Sbjct: 489 ALVLFKRMEKEGCDQTVYTYTILISGLFKEHRNEEALKLWDLMIDKG 535
Score = 103 bits (257), Expect = 1e-19
Identities = 60/222 (27%), Positives = 112/222 (50%), Gaps = 1/222 (0%)
Frame = +3
Query: 6 CKSGRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDS 185
CK+G ++A++ F ++ N+ + + Y +LI G + L++EM E+G
Sbjct: 271 CKAGNTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLHLYQEMEERGLEIPP 330
Query: 186 YCYNVLIDALAKNGKVDEALAVFKKMEDEGCDQTVYTFTILINGLFKEHRNEEALKLWDL 365
+ Y+++I L K+G+ E +VF+ M +GC V +T LI+ K EA+ L++
Sbjct: 331 HAYSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGNVNEAINLFER 390
Query: 366 MIDKGITPTAASCRALATGLCLSGKVARACKILDELAPMGIVLETAF-EDMMNVLCKAGR 542
M +G P + + GLC SG++ A + + + + F +++ L KAGR
Sbjct: 391 MKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLIDGLGKAGR 450
Query: 543 IAEACKLADGVIDRGREIPGRVRTIMINSLRKAGNADLAMKL 668
+ EA K + +++RG +I++L K+G + A+ L
Sbjct: 451 VDEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEEALVL 492
Score = 78.2 bits (191), Expect = 4e-12
Identities = 54/212 (25%), Positives = 97/212 (45%), Gaps = 2/212 (0%)
Frame = +3
Query: 15 GRLEEALQWFEYC-KRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYC 191
G+ + A ++F + K+ N + Y SLID L + + +F E EKG +
Sbjct: 133 GKPDIAFRFFWWAGKQKNYIHKIECYVSLIDVLSLSSDFDRVRCIFGEFKEKGFLMTVFA 192
Query: 192 YNVLIDALAKNGKVDEALAVFKKMEDEGCDQTVYTFTILINGLFKEHRNEEALKLWDLMI 371
N LI + G V+E L V+++M++ G + ++YTF L+NGL E A +++++M
Sbjct: 193 ANSLIRSFGALGMVEELLWVWRRMKESGIEPSLYTFNFLLNGLVNSMFIESAERVFEVME 252
Query: 372 DKGITPTAASCRALATGLCLSGKVARACKILDELAPMGIVLE-TAFEDMMNVLCKAGRIA 548
I P S + G C +G +A + ++ + + + ++ G
Sbjct: 253 CGKIGPDVVSYNTMIKGYCKAGNTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFD 312
Query: 549 EACKLADGVIDRGREIPGRVRTIMINSLRKAG 644
L + +RG EIP +++I L K G
Sbjct: 313 SCLHLYQEMEERGLEIPPHAYSLVIGGLCKDG 344
Score = 73.9 bits (180), Expect = 8e-11
Identities = 51/218 (23%), Positives = 95/218 (43%), Gaps = 1/218 (0%)
Frame = +3
Query: 15 GRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCY 194
G +EE L + K + + ++ ++ L++GL + +E AE++FE M D Y
Sbjct: 204 GMVEELLWVWRRMKESGIEPSLYTFNFLLNGLVNSMFIESAERVFEVMECGKIGPDVVSY 263
Query: 195 NVLIDALAKNGKVDEALAVFKKMEDEGCDQTVYTFTILINGLFKEHRNEEALKLWDLMID 374
N +I K G +A+ F ME + T+ LI + E + L L+ M +
Sbjct: 264 NTMIKGYCKAGNTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLHLYQEMEE 323
Query: 375 KGITPTAASCRALATGLCLSGKVARACKILDELAPMGIVLETA-FEDMMNVLCKAGRIAE 551
+G+ + + GLC G+ + + + G A + +++ K G + E
Sbjct: 324 RGLEIPPHAYSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGNVNE 383
Query: 552 ACKLADGVIDRGREIPGRVRTIMINSLRKAGNADLAMK 665
A L + + G E +++N L K+G D A++
Sbjct: 384 AINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVE 421
>ref|XP_004248470.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Solanum lycopersicum]
Length = 711
Score = 423 bits (1087), Expect = e-116
Identities = 199/249 (79%), Positives = 230/249 (92%)
Frame = +3
Query: 3 LCKSGRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRD 182
LCKS RL+EA+ W EYCK N+VA+N + YSSLIDGLGKAGR++EA +LFEEM EKGC RD
Sbjct: 463 LCKSERLDEAMLWLEYCKNNDVAINAMFYSSLIDGLGKAGRVDEARELFEEMAEKGCTRD 522
Query: 183 SYCYNVLIDALAKNGKVDEALAVFKKMEDEGCDQTVYTFTILINGLFKEHRNEEALKLWD 362
SYCYN LIDALAKNGK+DEAL +FK+MEDEGCDQTVYT+TILI+G+FKEH+NEEALKLW
Sbjct: 523 SYCYNALIDALAKNGKIDEALVLFKRMEDEGCDQTVYTYTILISGMFKEHQNEEALKLWH 582
Query: 363 LMIDKGITPTAASCRALATGLCLSGKVARACKILDELAPMGIVLETAFEDMMNVLCKAGR 542
+MIDKGITP AAS RAL+TGLCLSGKVARACKILDELAPMG++LETAFEDM+NVLCKAGR
Sbjct: 583 MMIDKGITPNAASFRALSTGLCLSGKVARACKILDELAPMGVILETAFEDMINVLCKAGR 642
Query: 543 IAEACKLADGVIDRGREIPGRVRTIMINSLRKAGNADLAMKLMHSKIGIGYHRMRSVKKR 722
+ EACKLADG++DRGREIPG+VRT++IN+LRK GNAD+A+KLMHSKIGIGY RM S+K+R
Sbjct: 643 LKEACKLADGIVDRGREIPGKVRTVLINALRKTGNADMAVKLMHSKIGIGYDRMGSIKRR 702
Query: 723 VKFRTLVES 749
VKFR LVES
Sbjct: 703 VKFRVLVES 711
Score = 102 bits (253), Expect = 3e-19
Identities = 63/203 (31%), Positives = 109/203 (53%), Gaps = 1/203 (0%)
Frame = +3
Query: 87 YSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEALAVFKKME 266
Y+ +I GL K G++ E +FE M++KG + Y LID+ K+G +DEA+ +F +M+
Sbjct: 386 YTLVIGGLCKMGKVLEGFTVFENMIKKGFRPNLSIYTALIDSYMKHGNLDEAMRLFDRMK 445
Query: 267 DEGCDQTVYTFTILINGLFKEHRNEEALKLWDLMIDKGITPTAASCRALATGLCLSGKVA 446
+EG + TF +++NGL K R +EA+ + + + A +L GL +G+V
Sbjct: 446 NEGFEPDEVTFGVIVNGLCKSERLDEAMLWLEYCKNNDVAINAMFYSSLIDGLGKAGRVD 505
Query: 447 RACKILDELAPMGIVLET-AFEDMMNVLCKAGRIAEACKLADGVIDRGREIPGRVRTIMI 623
A ++ +E+A G ++ + +++ L K G+I EA L + D G + TI+I
Sbjct: 506 EARELFEEMAEKGCTRDSYCYNALIDALAKNGKIDEALVLFKRMEDEGCDQTVYTYTILI 565
Query: 624 NSLRKAGNADLAMKLMHSKIGIG 692
+ + K + A+KL H I G
Sbjct: 566 SGMFKEHQNEEALKLWHMMIDKG 588
Score = 78.6 bits (192), Expect = 3e-12
Identities = 60/256 (23%), Positives = 113/256 (44%), Gaps = 37/256 (14%)
Frame = +3
Query: 12 SGRLEEALQWFEYC-KRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSY 188
+G+ + A ++F + K+ A N Y L+ L + L+ + +F E KG +
Sbjct: 185 TGKPDIAFRFFYWAGKQKGYAHNCECYVFLVKILSASCELDRIKHVFSEFKHKGFLMNVA 244
Query: 189 CYNVLIDALAKNGKVDEALAVFKKMEDEGCDQTVYTFTILINGLFKEHRNEEALKLWDLM 368
N LI + + G V+E L V+++M++ G + ++YT+ L+NGL E A +++++M
Sbjct: 245 AVNSLIRSFGELGMVEELLFVWRQMKENGIEPSLYTYNFLMNGLVNSMFVESAERVFEVM 304
Query: 369 IDKGITPTAASCRALATGLCLSGKVARAC---------KILDELAPMGIVLETAFED--- 512
+ P + + G C SGK+ +A K+ + V++ + D
Sbjct: 305 ESGKVNPDIVTYNTIIKGYCRSGKLQKAMEKFRDMEVRKVEPDKITYMTVMQACYADGDF 364
Query: 513 ------------------------MMNVLCKAGRIAEACKLADGVIDRGREIPGRVRTIM 620
++ LCK G++ E + + +I +G + T +
Sbjct: 365 DYCLGLYHEMEEKDLDIPPHAYTLVIGGLCKMGKVLEGFTVFENMIKKGFRPNLSIYTAL 424
Query: 621 INSLRKAGNADLAMKL 668
I+S K GN D AM+L
Sbjct: 425 IDSYMKHGNLDEAMRL 440
>ref|XP_006371589.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550317468|gb|ERP49386.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 659
Score = 422 bits (1086), Expect = e-116
Identities = 201/249 (80%), Positives = 232/249 (93%)
Frame = +3
Query: 3 LCKSGRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRD 182
+CKSGRL+EA+++ E+C+ N VA+N +LYSSLIDGLGKAGR+ EAEKLFEEMV+KGCP D
Sbjct: 411 MCKSGRLDEAMEYLEFCRVNGVAVNAMLYSSLIDGLGKAGRVHEAEKLFEEMVKKGCPPD 470
Query: 183 SYCYNVLIDALAKNGKVDEALAVFKKMEDEGCDQTVYTFTILINGLFKEHRNEEALKLWD 362
SYCYN LIDALAK GK+DEALA FK+MEDEGCDQTVYT+TI+INGLF+EH+NEEALK+WD
Sbjct: 471 SYCYNALIDALAKCGKIDEALAFFKRMEDEGCDQTVYTYTIMINGLFREHKNEEALKMWD 530
Query: 363 LMIDKGITPTAASCRALATGLCLSGKVARACKILDELAPMGIVLETAFEDMMNVLCKAGR 542
+MIDKGITPTAA+ RAL+ GLCLSGKVARACK+LDELAPMG++ ETAFEDM+NVLCKAGR
Sbjct: 531 MMIDKGITPTAAAFRALSIGLCLSGKVARACKLLDELAPMGVIPETAFEDMLNVLCKAGR 590
Query: 543 IAEACKLADGVIDRGREIPGRVRTIMINSLRKAGNADLAMKLMHSKIGIGYHRMRSVKKR 722
I EACKLADG +DRGREIPGRVRT++IN+LRKAGNADLA+KLMHSKIGIGY RM SVK+R
Sbjct: 591 IKEACKLADGFVDRGREIPGRVRTVLINALRKAGNADLALKLMHSKIGIGYDRMGSVKRR 650
Query: 723 VKFRTLVES 749
VKFR LVES
Sbjct: 651 VKFRILVES 659
Score = 102 bits (254), Expect = 2e-19
Identities = 66/227 (29%), Positives = 114/227 (50%), Gaps = 1/227 (0%)
Frame = +3
Query: 15 GRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCY 194
G + L + N + + YS +I GL K G+ E +FE+M++KGC + Y
Sbjct: 310 GDFDLCLSLYHEMDENGLEIPPHAYSLVIGGLCKEGKCVEGYAVFEKMIQKGCKVNVAIY 369
Query: 195 NVLIDALAKNGKVDEALAVFKKMEDEGCDQTVYTFTILINGLFKEHRNEEALKLWDLMID 374
LID+ AK G + EA+ +F++M+ EG + V T+ +++N + K R +EA++ +
Sbjct: 370 TALIDSNAKCGNMGEAMLLFERMKKEGLEPDVVTYGVVVNCMCKSGRLDEAMEYLEFCRV 429
Query: 375 KGITPTAASCRALATGLCLSGKVARACKILDELAPMGIVLET-AFEDMMNVLCKAGRIAE 551
G+ A +L GL +G+V A K+ +E+ G ++ + +++ L K G+I E
Sbjct: 430 NGVAVNAMLYSSLIDGLGKAGRVHEAEKLFEEMVKKGCPPDSYCYNALIDALAKCGKIDE 489
Query: 552 ACKLADGVIDRGREIPGRVRTIMINSLRKAGNADLAMKLMHSKIGIG 692
A + D G + TIMIN L + + A+K+ I G
Sbjct: 490 ALAFFKRMEDEGCDQTVYTYTIMINGLFREHKNEEALKMWDMMIDKG 536
Score = 99.0 bits (245), Expect = 2e-18
Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 1/220 (0%)
Frame = +3
Query: 6 CKSGRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDS 185
C+ G+ ++A + F + NVA + + Y +LI G + L+ EM E G
Sbjct: 272 CQVGKTQKAFEKFRDMELRNVAPDKITYMTLIQACYAEGDFDLCLSLYHEMDENGLEIPP 331
Query: 186 YCYNVLIDALAKNGKVDEALAVFKKMEDEGCDQTVYTFTILINGLFKEHRNEEALKLWDL 365
+ Y+++I L K GK E AVF+KM +GC V +T LI+ K EA+ L++
Sbjct: 332 HAYSLVIGGLCKEGKCVEGYAVFEKMIQKGCKVNVAIYTALIDSNAKCGNMGEAMLLFER 391
Query: 366 MIDKGITPTAASCRALATGLCLSGKVARACKILDELAPMGIVLET-AFEDMMNVLCKAGR 542
M +G+ P + + +C SG++ A + L+ G+ + + +++ L KAGR
Sbjct: 392 MKKEGLEPDVVTYGVVVNCMCKSGRLDEAMEYLEFCRVNGVAVNAMLYSSLIDGLGKAGR 451
Query: 543 IAEACKLADGVIDRGREIPGRVRTIMINSLRKAGNADLAM 662
+ EA KL + ++ +G +I++L K G D A+
Sbjct: 452 VHEAEKLFEEMVKKGCPPDSYCYNALIDALAKCGKIDEAL 491
Score = 67.8 bits (164), Expect = 6e-09
Identities = 51/210 (24%), Positives = 93/210 (44%), Gaps = 3/210 (1%)
Frame = +3
Query: 48 YCKRNNVA--MNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDALAK 221
+CK + MNV +SLI G G +EE ++ M E G + YN L++ L
Sbjct: 179 FCKFRGMGFLMNVSAANSLIKSFGSLGMVEELLWVWRGMKENGVEPSLFTYNFLLNGLVN 238
Query: 222 NGKVDEALAVFKKMEDEGCDQTVYTFTILINGLFKEHRNEEALKLWDLMIDKGITPTAAS 401
+ ++ A V + ME+ V T+ +I G + + ++A + + M + + P +
Sbjct: 239 SVFIESAERVLEVMENGKIGPDVVTYNTMIKGYCQVGKTQKAFEKFRDMELRNVAPDKIT 298
Query: 402 CRALATGLCLSGKVARACKILDELAPMGIVLET-AFEDMMNVLCKAGRIAEACKLADGVI 578
L G + E+ G+ + A+ ++ LCK G+ E + + +I
Sbjct: 299 YMTLIQACYAEGDFDLCLSLYHEMDENGLEIPPHAYSLVIGGLCKEGKCVEGYAVFEKMI 358
Query: 579 DRGREIPGRVRTIMINSLRKAGNADLAMKL 668
+G ++ + T +I+S K GN AM L
Sbjct: 359 QKGCKVNVAIYTALIDSNAKCGNMGEAMLL 388
>ref|XP_006447324.1| hypothetical protein CICLE_v10014552mg [Citrus clementina]
gi|568877202|ref|XP_006491635.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Citrus sinensis]
gi|557549935|gb|ESR60564.1| hypothetical protein
CICLE_v10014552mg [Citrus clementina]
Length = 650
Score = 421 bits (1083), Expect = e-115
Identities = 202/249 (81%), Positives = 232/249 (93%)
Frame = +3
Query: 3 LCKSGRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRD 182
LCK+ RLEEA+Q+FE+C+ N VA+N + YSSLIDGLGKAGR++EAE+LFEEMVEKGCPRD
Sbjct: 402 LCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRD 461
Query: 183 SYCYNVLIDALAKNGKVDEALAVFKKMEDEGCDQTVYTFTILINGLFKEHRNEEALKLWD 362
SYCYNVLIDALAK GK+DEALA+FK+MEDEGCDQTVYT+TILING+FKEHRNEEALKLWD
Sbjct: 462 SYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWD 521
Query: 363 LMIDKGITPTAASCRALATGLCLSGKVARACKILDELAPMGIVLETAFEDMMNVLCKAGR 542
+MIDKGITPTAAS RAL+ GLCLSGKVARACKILDELAP GI+ ETAFEDM+ LCKAGR
Sbjct: 522 MMIDKGITPTAASFRALSIGLCLSGKVARACKILDELAPKGIIPETAFEDMITCLCKAGR 581
Query: 543 IAEACKLADGVIDRGREIPGRVRTIMINSLRKAGNADLAMKLMHSKIGIGYHRMRSVKKR 722
I EACKLADG++DR REIPG++RT +IN+LRKAGNADLA+KLMHSKIG+GY RM S+K+R
Sbjct: 582 IKEACKLADGIVDREREIPGKIRTALINALRKAGNADLAIKLMHSKIGVGYDRMGSIKRR 641
Query: 723 VKFRTLVES 749
VKFR+LVES
Sbjct: 642 VKFRSLVES 650
Score = 107 bits (267), Expect = 7e-21
Identities = 64/222 (28%), Positives = 112/222 (50%), Gaps = 1/222 (0%)
Frame = +3
Query: 6 CKSGRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDS 185
CK G+ ++A++ F + NV + + Y +LI G + L+ EM EKG S
Sbjct: 263 CKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPS 322
Query: 186 YCYNVLIDALAKNGKVDEALAVFKKMEDEGCDQTVYTFTILINGLFKEHRNEEALKLWDL 365
+ YN++I L K GK E A+F+ M GC V +T LI+ K EA+ +++
Sbjct: 323 HAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFER 382
Query: 366 MIDKGITPTAASCRALATGLCLSGKVARACKILDELAPMGIVLETAF-EDMMNVLCKAGR 542
M +G+ P + R + GLC + ++ A + + G+ + F +++ L KAGR
Sbjct: 383 MKYEGVEPDDVTYRVIVGGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGR 442
Query: 543 IAEACKLADGVIDRGREIPGRVRTIMINSLRKAGNADLAMKL 668
+ EA +L + ++++G ++I++L K G D A+ L
Sbjct: 443 VDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALAL 484
Score = 73.6 bits (179), Expect = 1e-10
Identities = 54/223 (24%), Positives = 97/223 (43%), Gaps = 1/223 (0%)
Frame = +3
Query: 3 LCKSGRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRD 182
L G ++ F K M V +SLI G G +EE ++ M E G
Sbjct: 157 LALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMKENGIEPS 216
Query: 183 SYCYNVLIDALAKNGKVDEALAVFKKMEDEGCDQTVYTFTILINGLFKEHRNEEALKLWD 362
Y YN L++ L + ++ + VFK ME+ T+ +I G K + ++A++ +
Sbjct: 217 LYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDGVTYNTMIKGYCKVGKTQKAMEKFR 276
Query: 363 LMIDKGITPTAASCRALATGLCLSGKVARACKILDELAPMGIVLET-AFEDMMNVLCKAG 539
M + + P + L L G + E+ GI + + A+ ++ LCK G
Sbjct: 277 AMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVG 336
Query: 540 RIAEACKLADGVIDRGREIPGRVRTIMINSLRKAGNADLAMKL 668
+ E + + +I RG + + T +I+S K G+ + A+ +
Sbjct: 337 KCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINI 379
>ref|XP_002329409.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 420 bits (1079), Expect = e-115
Identities = 200/248 (80%), Positives = 230/248 (92%)
Frame = +3
Query: 3 LCKSGRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRD 182
+CKSGRL+EA+++ E+C+ N VA+N +LYSSLIDGLGKAGR+ EAEKLFEEMV+KGCP D
Sbjct: 352 MCKSGRLDEAMEYLEFCRVNGVAVNAMLYSSLIDGLGKAGRVHEAEKLFEEMVKKGCPPD 411
Query: 183 SYCYNVLIDALAKNGKVDEALAVFKKMEDEGCDQTVYTFTILINGLFKEHRNEEALKLWD 362
SYCYN LIDALAK GK DEALA FK+MEDEGCDQTVYT+TI+INGLF+EH+NEEALK+WD
Sbjct: 412 SYCYNALIDALAKCGKTDEALAFFKRMEDEGCDQTVYTYTIMINGLFREHKNEEALKMWD 471
Query: 363 LMIDKGITPTAASCRALATGLCLSGKVARACKILDELAPMGIVLETAFEDMMNVLCKAGR 542
+MIDKGITPTAA+ RAL+ GLCLSGKVARACK+LDELAPMG++ ETAFEDM+NVLCKAGR
Sbjct: 472 MMIDKGITPTAAAFRALSIGLCLSGKVARACKLLDELAPMGVIPETAFEDMLNVLCKAGR 531
Query: 543 IAEACKLADGVIDRGREIPGRVRTIMINSLRKAGNADLAMKLMHSKIGIGYHRMRSVKKR 722
I EACKLADG +DRGREIPGRVRT++IN+LRKAGNADLA+KLMHSKIGIGY RM SVK+R
Sbjct: 532 IKEACKLADGFVDRGREIPGRVRTVLINALRKAGNADLALKLMHSKIGIGYDRMGSVKRR 591
Query: 723 VKFRTLVE 746
VKFR LVE
Sbjct: 592 VKFRILVE 599
Score = 100 bits (249), Expect = 8e-19
Identities = 65/227 (28%), Positives = 113/227 (49%), Gaps = 1/227 (0%)
Frame = +3
Query: 15 GRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCY 194
G + L + N + + YS +I GL K G+ E +FE+M++KGC + Y
Sbjct: 251 GDFDLCLSLYHEMDENGLEIPPHAYSLVIGGLCKEGKCVEGYAVFEKMIQKGCKVNVAIY 310
Query: 195 NVLIDALAKNGKVDEALAVFKKMEDEGCDQTVYTFTILINGLFKEHRNEEALKLWDLMID 374
LID+ AK G + EA+ +F++M+ EG + V T+ +++N + K R +EA++ +
Sbjct: 311 TALIDSNAKCGNMGEAMLLFERMKKEGLEPDVVTYGVVVNCMCKSGRLDEAMEYLEFCRV 370
Query: 375 KGITPTAASCRALATGLCLSGKVARACKILDELAPMGIVLET-AFEDMMNVLCKAGRIAE 551
G+ A +L GL +G+V A K+ +E+ G ++ + +++ L K G+ E
Sbjct: 371 NGVAVNAMLYSSLIDGLGKAGRVHEAEKLFEEMVKKGCPPDSYCYNALIDALAKCGKTDE 430
Query: 552 ACKLADGVIDRGREIPGRVRTIMINSLRKAGNADLAMKLMHSKIGIG 692
A + D G + TIMIN L + + A+K+ I G
Sbjct: 431 ALAFFKRMEDEGCDQTVYTYTIMINGLFREHKNEEALKMWDMMIDKG 477
Score = 99.4 bits (246), Expect = 2e-18
Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 1/220 (0%)
Frame = +3
Query: 6 CKSGRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDS 185
C+ G+ ++A + F + NVA + + Y +LI G + L+ EM E G
Sbjct: 213 CQVGKTQKAFEKFRDMELRNVAPDKITYMTLIQACYAEGDFDLCLSLYHEMDENGLEIPP 272
Query: 186 YCYNVLIDALAKNGKVDEALAVFKKMEDEGCDQTVYTFTILINGLFKEHRNEEALKLWDL 365
+ Y+++I L K GK E AVF+KM +GC V +T LI+ K EA+ L++
Sbjct: 273 HAYSLVIGGLCKEGKCVEGYAVFEKMIQKGCKVNVAIYTALIDSNAKCGNMGEAMLLFER 332
Query: 366 MIDKGITPTAASCRALATGLCLSGKVARACKILDELAPMGIVLET-AFEDMMNVLCKAGR 542
M +G+ P + + +C SG++ A + L+ G+ + + +++ L KAGR
Sbjct: 333 MKKEGLEPDVVTYGVVVNCMCKSGRLDEAMEYLEFCRVNGVAVNAMLYSSLIDGLGKAGR 392
Query: 543 IAEACKLADGVIDRGREIPGRVRTIMINSLRKAGNADLAM 662
+ EA KL + ++ +G +I++L K G D A+
Sbjct: 393 VHEAEKLFEEMVKKGCPPDSYCYNALIDALAKCGKTDEAL 432
Score = 67.8 bits (164), Expect = 6e-09
Identities = 51/210 (24%), Positives = 93/210 (44%), Gaps = 3/210 (1%)
Frame = +3
Query: 48 YCKRNNVA--MNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDALAK 221
+CK + MNV +SLI G G +EE ++ M E G + YN L++ L
Sbjct: 120 FCKFRGMGFLMNVSAANSLIKSFGSLGMVEELLWVWRGMKENGVEPSLFTYNFLLNGLVN 179
Query: 222 NGKVDEALAVFKKMEDEGCDQTVYTFTILINGLFKEHRNEEALKLWDLMIDKGITPTAAS 401
+ ++ A V + ME+ V T+ +I G + + ++A + + M + + P +
Sbjct: 180 SVFIESAERVLEVMENGKIGPDVVTYNTMIKGYCQVGKTQKAFEKFRDMELRNVAPDKIT 239
Query: 402 CRALATGLCLSGKVARACKILDELAPMGIVLET-AFEDMMNVLCKAGRIAEACKLADGVI 578
L G + E+ G+ + A+ ++ LCK G+ E + + +I
Sbjct: 240 YMTLIQACYAEGDFDLCLSLYHEMDENGLEIPPHAYSLVIGGLCKEGKCVEGYAVFEKMI 299
Query: 579 DRGREIPGRVRTIMINSLRKAGNADLAMKL 668
+G ++ + T +I+S K GN AM L
Sbjct: 300 QKGCKVNVAIYTALIDSNAKCGNMGEAMLL 329
>gb|EMJ18185.1| hypothetical protein PRUPE_ppa002596mg [Prunus persica]
Length = 654
Score = 419 bits (1076), Expect = e-114
Identities = 196/249 (78%), Positives = 234/249 (93%)
Frame = +3
Query: 3 LCKSGRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRD 182
LCKSGR+EEA+++F++C+ + +A+N +LYSSLI+GLGKAGRL+EAE+LFE+M+EKGCP+D
Sbjct: 406 LCKSGRVEEAMEYFQFCEGSGMAVNAMLYSSLIEGLGKAGRLDEAERLFEKMIEKGCPQD 465
Query: 183 SYCYNVLIDALAKNGKVDEALAVFKKMEDEGCDQTVYTFTILINGLFKEHRNEEALKLWD 362
SYCYN LIDALAK GK DEALA+FKKME+EGCDQTVYT+TILI+GLFKEH+NEEALKLWD
Sbjct: 466 SYCYNALIDALAKGGKTDEALALFKKMEEEGCDQTVYTYTILISGLFKEHKNEEALKLWD 525
Query: 363 LMIDKGITPTAASCRALATGLCLSGKVARACKILDELAPMGIVLETAFEDMMNVLCKAGR 542
+MID+GITPTAAS RAL+ GLCLSGKVARACKILDELAP+G++ ETAFEDM+NVLCKAGR
Sbjct: 526 MMIDQGITPTAASFRALSIGLCLSGKVARACKILDELAPLGVIPETAFEDMINVLCKAGR 585
Query: 543 IAEACKLADGVIDRGREIPGRVRTIMINSLRKAGNADLAMKLMHSKIGIGYHRMRSVKKR 722
EACKLADG++DRGREIPGR+RT++IN+LRKAGNADLAMKLMHSKIGIGY RM S+K+R
Sbjct: 586 FKEACKLADGIVDRGREIPGRIRTVLINALRKAGNADLAMKLMHSKIGIGYDRMGSIKRR 645
Query: 723 VKFRTLVES 749
VKFR L +S
Sbjct: 646 VKFRILFDS 654
Score = 113 bits (283), Expect = 9e-23
Identities = 69/222 (31%), Positives = 114/222 (51%), Gaps = 1/222 (0%)
Frame = +3
Query: 6 CKSGRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDS 185
CK+G+ ++A++ F + NV + + Y +LI G G + L++EM EKG
Sbjct: 267 CKAGKTQKAMEKFRAMEGRNVEPDKITYMTLIQGCYSEGDFDLCLGLYQEMEEKGLEIPP 326
Query: 186 YCYNVLIDALAKNGKVDEALAVFKKMEDEGCDQTVYTFTILINGLFKEHRNEEALKLWDL 365
+ Y+++I+ L K GK E AVF+ M +GC V +T LI+ K E A+KL+D
Sbjct: 327 HAYSLVINGLCKGGKCMEGYAVFEDMIQKGCKANVANYTALIDSYAKCGSIEGAMKLFDR 386
Query: 366 MIDKGITPTAASCRALATGLCLSGKVARACKILDELAPMGIVLET-AFEDMMNVLCKAGR 542
M + G+ P + + GLC SG+V A + G+ + + ++ L KAGR
Sbjct: 387 MKNDGLKPDVVTYGVVVNGLCKSGRVEEAMEYFQFCEGSGMAVNAMLYSSLIEGLGKAGR 446
Query: 543 IAEACKLADGVIDRGREIPGRVRTIMINSLRKAGNADLAMKL 668
+ EA +L + +I++G +I++L K G D A+ L
Sbjct: 447 LDEAERLFEKMIEKGCPQDSYCYNALIDALAKGGKTDEALAL 488
Score = 97.1 bits (240), Expect = 9e-18
Identities = 64/231 (27%), Positives = 110/231 (47%), Gaps = 1/231 (0%)
Frame = +3
Query: 3 LCKSGRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRD 182
L S +E A + FE + + +VV Y+++I G KAG+ ++A + F M + D
Sbjct: 231 LVNSMFIESAERVFEVMEGGKIVPDVVTYNTMIKGYCKAGKTQKAMEKFRAMEGRNVEPD 290
Query: 183 SYCYNVLIDALAKNGKVDEALAVFKKMEDEGCDQTVYTFTILINGLFKEHRNEEALKLWD 362
Y LI G D L ++++ME++G + + ++++INGL K + E +++
Sbjct: 291 KITYMTLIQGCYSEGDFDLCLGLYQEMEEKGLEIPPHAYSLVINGLCKGGKCMEGYAVFE 350
Query: 363 LMIDKGITPTAASCRALATGLCLSGKVARACKILDELAPMGIVLE-TAFEDMMNVLCKAG 539
MI KG A+ AL G + A K+ D + G+ + + ++N LCK+G
Sbjct: 351 DMIQKGCKANVANYTALIDSYAKCGSIEGAMKLFDRMKNDGLKPDVVTYGVVVNGLCKSG 410
Query: 540 RIAEACKLADGVIDRGREIPGRVRTIMINSLRKAGNADLAMKLMHSKIGIG 692
R+ EA + G + + + +I L KAG D A +L I G
Sbjct: 411 RVEEAMEYFQFCEGSGMAVNAMLYSSLIEGLGKAGRLDEAERLFEKMIEKG 461
Score = 84.7 bits (208), Expect = 5e-14
Identities = 65/255 (25%), Positives = 114/255 (44%), Gaps = 37/255 (14%)
Frame = +3
Query: 15 GRLEEALQWFEYC-KRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYC 191
G+ E AL++F + K+ + Y SLID L +G L+ + E+ EK +S
Sbjct: 129 GKPETALRFFAWAGKQKKYHHKLECYVSLIDLLSSSGDLDRIRYVLAELKEKNFLMNSAA 188
Query: 192 YNVLIDALAKNGKVDEALAVFKKMEDEGCDQTVYTFTILINGLFKEHRNEEALKLWDLMI 371
N LI + G VDE L V+++M++ G + ++YT+ L+NGL E A +++++M
Sbjct: 189 ANSLIKSFGCLGMVDELLWVWRRMKENGIEPSLYTYNFLVNGLVNSMFIESAERVFEVME 248
Query: 372 DKGITPTAASCRALATGLCLSGKVARACK------------------------------- 458
I P + + G C +GK +A +
Sbjct: 249 GGKIVPDVVTYNTMIKGYCKAGKTQKAMEKFRAMEGRNVEPDKITYMTLIQGCYSEGDFD 308
Query: 459 ----ILDELAPMGIVLET-AFEDMMNVLCKAGRIAEACKLADGVIDRGREIPGRVRTIMI 623
+ E+ G+ + A+ ++N LCK G+ E + + +I +G + T +I
Sbjct: 309 LCLGLYQEMEEKGLEIPPHAYSLVINGLCKGGKCMEGYAVFEDMIQKGCKANVANYTALI 368
Query: 624 NSLRKAGNADLAMKL 668
+S K G+ + AMKL
Sbjct: 369 DSYAKCGSIEGAMKL 383
Score = 84.7 bits (208), Expect = 5e-14
Identities = 59/227 (25%), Positives = 102/227 (44%), Gaps = 1/227 (0%)
Frame = +3
Query: 15 GRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCY 194
G ++E L + K N + ++ Y+ L++GL + +E AE++FE M D Y
Sbjct: 200 GMVDELLWVWRRMKENGIEPSLYTYNFLVNGLVNSMFIESAERVFEVMEGGKIVPDVVTY 259
Query: 195 NVLIDALAKNGKVDEALAVFKKMEDEGCDQTVYTFTILINGLFKEHRNEEALKLWDLMID 374
N +I K GK +A+ F+ ME + T+ LI G + E + L L+ M +
Sbjct: 260 NTMIKGYCKAGKTQKAMEKFRAMEGRNVEPDKITYMTLIQGCYSEGDFDLCLGLYQEMEE 319
Query: 375 KGITPTAASCRALATGLCLSGKVARACKILDELAPMGIVLETA-FEDMMNVLCKAGRIAE 551
KG+ + + GLC GK + +++ G A + +++ K G I
Sbjct: 320 KGLEIPPHAYSLVINGLCKGGKCMEGYAVFEDMIQKGCKANVANYTALIDSYAKCGSIEG 379
Query: 552 ACKLADGVIDRGREIPGRVRTIMINSLRKAGNADLAMKLMHSKIGIG 692
A KL D + + G + +++N L K+G + AM+ G G
Sbjct: 380 AMKLFDRMKNDGLKPDVVTYGVVVNGLCKSGRVEEAMEYFQFCEGSG 426
>ref|XP_004306013.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 656
Score = 416 bits (1069), Expect = e-114
Identities = 197/248 (79%), Positives = 231/248 (93%)
Frame = +3
Query: 3 LCKSGRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRD 182
LCKSGR+EEA+++F++C+ + +A N +LYSSLIDGLGKAGR++EAE+LFE+M+EKGCP D
Sbjct: 408 LCKSGRVEEAIEYFQFCQDSRMADNAMLYSSLIDGLGKAGRVDEAERLFEKMIEKGCPPD 467
Query: 183 SYCYNVLIDALAKNGKVDEALAVFKKMEDEGCDQTVYTFTILINGLFKEHRNEEALKLWD 362
SYCYN LIDALAK GK DEALA+FKKME+EGCDQTVYT+TILI+GLFKEHRNE+ALKLWD
Sbjct: 468 SYCYNALIDALAKCGKTDEALALFKKMEEEGCDQTVYTYTILIDGLFKEHRNEDALKLWD 527
Query: 363 LMIDKGITPTAASCRALATGLCLSGKVARACKILDELAPMGIVLETAFEDMMNVLCKAGR 542
+MIDKGITPTAAS RAL+ GLCLSGKVARACKILD+LAPMG++ ETAFEDM+NVLCKAGR
Sbjct: 528 MMIDKGITPTAASFRALSIGLCLSGKVARACKILDDLAPMGVIPETAFEDMINVLCKAGR 587
Query: 543 IAEACKLADGVIDRGREIPGRVRTIMINSLRKAGNADLAMKLMHSKIGIGYHRMRSVKKR 722
+ EACKLADG++DRGREIPGR+RTI+IN+LRK GNADLAMKLMHSKIGIGY R SVKKR
Sbjct: 588 VKEACKLADGIVDRGREIPGRIRTILINALRKTGNADLAMKLMHSKIGIGYDRWGSVKKR 647
Query: 723 VKFRTLVE 746
VKFR L++
Sbjct: 648 VKFRILID 655
Score = 107 bits (268), Expect = 5e-21
Identities = 68/223 (30%), Positives = 114/223 (51%), Gaps = 2/223 (0%)
Frame = +3
Query: 6 CKSGRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDS 185
CK+GR +A++ F + NV + + Y +L+ G G + L++EM EK S
Sbjct: 269 CKAGRTPKAMEKFRSMEGRNVEADKITYMTLMQGCYSEGDFDSCLSLYQEMREKRVEVPS 328
Query: 186 YCYNVLIDALAKNGKVDEALAVFKKMEDEGCDQTVYTFTILINGLFKEHRNEEALKLWDL 365
+ Y+++I+ L K GK AVF+ M +GC V +T LI+ K EEA+KL++
Sbjct: 329 HAYSLVINGLCKGGKCVVGFAVFEDMIQKGCKANVANYTALIDSYAKCGCIEEAMKLFER 388
Query: 366 MIDKGITPTAASCRALATGLCLSGKVARACKILDELAPMGIVLETA--FEDMMNVLCKAG 539
M G+ P + + GLC SG+V A + + + + A + +++ L KAG
Sbjct: 389 MKSDGLEPDGVTYGVIVNGLCKSGRVEEAIEYF-QFCQDSRMADNAMLYSSLIDGLGKAG 447
Query: 540 RIAEACKLADGVIDRGREIPGRVRTIMINSLRKAGNADLAMKL 668
R+ EA +L + +I++G +I++L K G D A+ L
Sbjct: 448 RVDEAERLFEKMIEKGCPPDSYCYNALIDALAKCGKTDEALAL 490
Score = 85.9 bits (211), Expect = 2e-14
Identities = 56/218 (25%), Positives = 101/218 (46%), Gaps = 1/218 (0%)
Frame = +3
Query: 15 GRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCY 194
G +EE L + K N + ++ Y+ L++GL + +E AE++FE M D Y
Sbjct: 202 GMVEELLWVWRGMKENGIEPSLFTYNFLVNGLVNSMFIESAERVFEVMEGGKIVPDIVTY 261
Query: 195 NVLIDALAKNGKVDEALAVFKKMEDEGCDQTVYTFTILINGLFKEHRNEEALKLWDLMID 374
N +I K G+ +A+ F+ ME + T+ L+ G + E + L L+ M +
Sbjct: 262 NTMIKGYCKAGRTPKAMEKFRSMEGRNVEADKITYMTLMQGCYSEGDFDSCLSLYQEMRE 321
Query: 375 KGITPTAASCRALATGLCLSGKVARACKILDELAPMGIVLETA-FEDMMNVLCKAGRIAE 551
K + + + + GLC GK + +++ G A + +++ K G I E
Sbjct: 322 KRVEVPSHAYSLVINGLCKGGKCVVGFAVFEDMIQKGCKANVANYTALIDSYAKCGCIEE 381
Query: 552 ACKLADGVIDRGREIPGRVRTIMINSLRKAGNADLAMK 665
A KL + + G E G +++N L K+G + A++
Sbjct: 382 AMKLFERMKSDGLEPDGVTYGVIVNGLCKSGRVEEAIE 419
Score = 67.4 bits (163), Expect = 8e-09
Identities = 48/225 (21%), Positives = 99/225 (44%), Gaps = 2/225 (0%)
Frame = +3
Query: 24 EEALQWFEYC-KRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNV 200
E AL++F + K++ + Y LI+ L G L+ + + E+ E ++ N
Sbjct: 134 ETALRFFSWASKQHKYHHKLECYVCLIEILCLCGELDSVKCVVNELREMRLLMNANAANS 193
Query: 201 LIDALAKNGKVDEALAVFKKMEDEGCDQTVYTFTILINGLFKEHRNEEALKLWDLMIDKG 380
L+ + G V+E L V++ M++ G + +++T+ L+NGL E A +++++M
Sbjct: 194 LVKSFGSVGMVEELLWVWRGMKENGIEPSLFTYNFLVNGLVNSMFIESAERVFEVMEGGK 253
Query: 381 ITPTAASCRALATGLCLSGKVARACKILDELAPMGIVLE-TAFEDMMNVLCKAGRIAEAC 557
I P + + G C +G+ +A + + + + + +M G
Sbjct: 254 IVPDIVTYNTMIKGYCKAGRTPKAMEKFRSMEGRNVEADKITYMTLMQGCYSEGDFDSCL 313
Query: 558 KLADGVIDRGREIPGRVRTIMINSLRKAGNADLAMKLMHSKIGIG 692
L + ++ E+P +++IN L K G + + I G
Sbjct: 314 SLYQEMREKRVEVPSHAYSLVINGLCKGGKCVVGFAVFEDMIQKG 358
>gb|EOY09328.1| Pentatricopeptide repeat (PPR-like) superfamily protein [Theobroma
cacao]
Length = 654
Score = 410 bits (1053), Expect = e-112
Identities = 193/248 (77%), Positives = 228/248 (91%)
Frame = +3
Query: 3 LCKSGRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRD 182
LCKSGRL+EA+++ +C+ N VA+N + Y SLIDGLGKAGR++EA+KLFEEMVEK CPRD
Sbjct: 406 LCKSGRLDEAMEYLRFCRANEVAINAMFYCSLIDGLGKAGRVDEAQKLFEEMVEKDCPRD 465
Query: 183 SYCYNVLIDALAKNGKVDEALAVFKKMEDEGCDQTVYTFTILINGLFKEHRNEEALKLWD 362
SYCYN LIDALAK G+V++AL +F +MEDEGCDQTVYT+TILI+GLF+EH+NEEA+KLWD
Sbjct: 466 SYCYNALIDALAKCGRVNDALTLFNRMEDEGCDQTVYTYTILISGLFREHKNEEAMKLWD 525
Query: 363 LMIDKGITPTAASCRALATGLCLSGKVARACKILDELAPMGIVLETAFEDMMNVLCKAGR 542
+MIDKGITPTAAS RAL+ GLCLSGKV RACKILD+LAPMG++ ETAFEDM++VLCKAGR
Sbjct: 526 MMIDKGITPTAASFRALSIGLCLSGKVTRACKILDDLAPMGVIPETAFEDMIHVLCKAGR 585
Query: 543 IAEACKLADGVIDRGREIPGRVRTIMINSLRKAGNADLAMKLMHSKIGIGYHRMRSVKKR 722
I EACKLADG++DRGREIPGR+RTI+IN+LRKAGNADLAMKLMHSKIGIGY RM S+K+R
Sbjct: 586 IKEACKLADGIVDRGREIPGRIRTILINALRKAGNADLAMKLMHSKIGIGYDRMGSIKRR 645
Query: 723 VKFRTLVE 746
VKFR LVE
Sbjct: 646 VKFRILVE 653
Score = 103 bits (258), Expect = 7e-20
Identities = 65/224 (29%), Positives = 111/224 (49%), Gaps = 1/224 (0%)
Frame = +3
Query: 6 CKSGRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDS 185
CK+G+ +A++ + N+ + + Y +L+ G + L+ EMVEK C
Sbjct: 267 CKAGKTHKAMEKIRAMETINLEPDKITYMTLMQACYSEGNFDSCLGLYHEMVEKRCEVPP 326
Query: 186 YCYNVLIDALAKNGKVDEALAVFKKMEDEGCDQTVYTFTILINGLFKEHRNEEALKLWDL 365
+ Y+++I L K+GK E AVF+ M G V +T +I+ K R E+ALKL+
Sbjct: 327 HAYSLIIGGLCKDGKCIEGYAVFENMIRSGLKANVVIYTTVIDAFAKCGRMEDALKLFQT 386
Query: 366 MIDKGITPTAASCRALATGLCLSGKVARACKILDELAPMGIVLETAFE-DMMNVLCKAGR 542
M G+ P S A+ GLC SG++ A + L + + F +++ L KAGR
Sbjct: 387 MKTDGLEPDEVSYGAIVNGLCKSGRLDEAMEYLRFCRANEVAINAMFYCSLIDGLGKAGR 446
Query: 543 IAEACKLADGVIDRGREIPGRVRTIMINSLRKAGNADLAMKLMH 674
+ EA KL + ++++ +I++L K G + A+ L +
Sbjct: 447 VDEAQKLFEEMVEKDCPRDSYCYNALIDALAKCGRVNDALTLFN 490
Score = 69.7 bits (169), Expect = 2e-09
Identities = 50/207 (24%), Positives = 95/207 (45%), Gaps = 2/207 (0%)
Frame = +3
Query: 30 ALQWFEYC-KRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLI 206
AL++F + K+ + Y S+I+ L A L + LF ++ E G N LI
Sbjct: 134 ALRFFAWAAKQKKYTHKLECYVSMINVLALANDLVKVRFLFGQLKEMGIVMTMSSANSLI 193
Query: 207 DALAKNGKVDEALAVFKKMEDEGCDQTVYTFTILINGLFKEHRNEEALKLWDLMIDKGIT 386
G V+E L V+++M++ + ++YTF +L+NGL E A +++ +M + I
Sbjct: 194 KNFVGLGMVEELLWVWRRMKENEIEPSLYTFNLLLNGLVNSMFIESAEQVFKVMENSKIR 253
Query: 387 PTAASCRALATGLCLSGKVARACKILDELAPMGIVLE-TAFEDMMNVLCKAGRIAEACKL 563
P S + G C +GK +A + + + + + + + +M G L
Sbjct: 254 PDVVSYNTMIKGYCKAGKTHKAMEKIRAMETINLEPDKITYMTLMQACYSEGNFDSCLGL 313
Query: 564 ADGVIDRGREIPGRVRTIMINSLRKAG 644
++++ E+P +++I L K G
Sbjct: 314 YHEMVEKRCEVPPHAYSLIIGGLCKDG 340
>gb|EXB62273.1| hypothetical protein L484_022161 [Morus notabilis]
Length = 557
Score = 406 bits (1044), Expect = e-111
Identities = 191/249 (76%), Positives = 227/249 (91%)
Frame = +3
Query: 3 LCKSGRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRD 182
LC++GR++EA+ +FE+CK + +N + YSSLI+G GKAG +EEA+ +FEEMV+ GCPRD
Sbjct: 309 LCRNGRMDEAMGYFEFCKGKGMPINSMFYSSLINGFGKAGNVEEAQTIFEEMVDNGCPRD 368
Query: 183 SYCYNVLIDALAKNGKVDEALAVFKKMEDEGCDQTVYTFTILINGLFKEHRNEEALKLWD 362
SYCYN LIDALAK+G DEALA+FK+MEDEGCDQTVYT+TILI+GLFKEH+NEEALKLWD
Sbjct: 369 SYCYNALIDALAKSGNTDEALALFKRMEDEGCDQTVYTYTILIDGLFKEHKNEEALKLWD 428
Query: 363 LMIDKGITPTAASCRALATGLCLSGKVARACKILDELAPMGIVLETAFEDMMNVLCKAGR 542
+MIDKGITPTAAS RAL+ GLCLSGKVARACKILD+LAPMG++ ETAFEDM+NVLCKAGR
Sbjct: 429 IMIDKGITPTAASFRALSIGLCLSGKVARACKILDDLAPMGVIPETAFEDMLNVLCKAGR 488
Query: 543 IAEACKLADGVIDRGREIPGRVRTIMINSLRKAGNADLAMKLMHSKIGIGYHRMRSVKKR 722
I EACKLADG++DRGREIPGR+RT++IN+LRKAGN+DLA+KLMHSKIGIGY RM SVKKR
Sbjct: 489 IKEACKLADGIVDRGREIPGRIRTVLINALRKAGNSDLAIKLMHSKIGIGYDRMGSVKKR 548
Query: 723 VKFRTLVES 749
VKF+ LV S
Sbjct: 549 VKFQELVSS 557
Score = 96.7 bits (239), Expect = 1e-17
Identities = 62/222 (27%), Positives = 104/222 (46%), Gaps = 1/222 (0%)
Frame = +3
Query: 6 CKSGRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDS 185
CK+G++++A F + NV + V Y +L+ + L+ EM EK
Sbjct: 170 CKAGQVQKAFDKFRAMEARNVQPDKVTYMTLMQACYSKEDFDSCLSLYHEMEEKRLEIPP 229
Query: 186 YCYNVLIDALAKNGKVDEALAVFKKMEDEGCDQTVYTFTILINGLFKEHRNEEALKLWDL 365
+ Y ++I L K GK E AVF M +G V +T +I+ K EEA++L+
Sbjct: 230 HAYTLVISGLCKRGKCMEGYAVFNDMIQKGYGANVAIYTAMIDSYSKCGSMEEAVRLFKR 289
Query: 366 MIDKGITPTAASCRALATGLCLSGKVARACKILDELAPMGIVLETAF-EDMMNVLCKAGR 542
M G+ P S + GLC +G++ A + G+ + + F ++N KAG
Sbjct: 290 MESDGLEPDEVSYGVIINGLCRNGRMDEAMGYFEFCKGKGMPINSMFYSSLINGFGKAGN 349
Query: 543 IAEACKLADGVIDRGREIPGRVRTIMINSLRKAGNADLAMKL 668
+ EA + + ++D G +I++L K+GN D A+ L
Sbjct: 350 VEEAQTIFEEMVDNGCPRDSYCYNALIDALAKSGNTDEALAL 391
Score = 92.4 bits (228), Expect = 2e-16
Identities = 58/203 (28%), Positives = 104/203 (51%), Gaps = 1/203 (0%)
Frame = +3
Query: 87 YSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEALAVFKKME 266
Y+ +I GL K G+ E +F +M++KG + Y +ID+ +K G ++EA+ +FK+ME
Sbjct: 232 YTLVISGLCKRGKCMEGYAVFNDMIQKGYGANVAIYTAMIDSYSKCGSMEEAVRLFKRME 291
Query: 267 DEGCDQTVYTFTILINGLFKEHRNEEALKLWDLMIDKGITPTAASCRALATGLCLSGKVA 446
+G + ++ ++INGL + R +EA+ ++ KG+ + +L G +G V
Sbjct: 292 SDGLEPDEVSYGVIINGLCRNGRMDEAMGYFEFCKGKGMPINSMFYSSLINGFGKAGNVE 351
Query: 447 RACKILDELAPMGIVLET-AFEDMMNVLCKAGRIAEACKLADGVIDRGREIPGRVRTIMI 623
A I +E+ G ++ + +++ L K+G EA L + D G + TI+I
Sbjct: 352 EAQTIFEEMVDNGCPRDSYCYNALIDALAKSGNTDEALALFKRMEDEGCDQTVYTYTILI 411
Query: 624 NSLRKAGNADLAMKLMHSKIGIG 692
+ L K + A+KL I G
Sbjct: 412 DGLFKEHKNEEALKLWDIMIDKG 434
Score = 84.3 bits (207), Expect = 6e-14
Identities = 59/234 (25%), Positives = 107/234 (45%), Gaps = 1/234 (0%)
Frame = +3
Query: 3 LCKSGRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRD 182
L S +E A + FE + V ++V Y++L G KAG++++A F M + D
Sbjct: 134 LVNSMFIESAERVFEAMENGKVEPDIVTYNTLFKGYCKAGQVQKAFDKFRAMEARNVQPD 193
Query: 183 SYCYNVLIDALAKNGKVDEALAVFKKMEDEGCDQTVYTFTILINGLFKEHRNEEALKLWD 362
Y L+ A D L+++ +ME++ + + +T++I+GL K + E +++
Sbjct: 194 KVTYMTLMQACYSKEDFDSCLSLYHEMEEKRLEIPPHAYTLVISGLCKRGKCMEGYAVFN 253
Query: 363 LMIDKGITPTAASCRALATGLCLSGKVARACKILDELAPMGIVL-ETAFEDMMNVLCKAG 539
MI KG A A+ G + A ++ + G+ E ++ ++N LC+ G
Sbjct: 254 DMIQKGYGANVAIYTAMIDSYSKCGSMEEAVRLFKRMESDGLEPDEVSYGVIINGLCRNG 313
Query: 540 RIAEACKLADGVIDRGREIPGRVRTIMINSLRKAGNADLAMKLMHSKIGIGYHR 701
R+ EA + +G I + +IN KAGN + A + + G R
Sbjct: 314 RMDEAMGYFEFCKGKGMPINSMFYSSLINGFGKAGNVEEAQTIFEEMVDNGCPR 367
Score = 74.7 bits (182), Expect = 5e-11
Identities = 55/217 (25%), Positives = 94/217 (43%), Gaps = 1/217 (0%)
Frame = +3
Query: 15 GRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCY 194
G +EE L + K N + ++ Y+ L++GL + +E AE++FE M D Y
Sbjct: 103 GMVEELLWVWRQMKENGIDPSLYTYNFLMNGLVNSMFIESAERVFEAMENGKVEPDIVTY 162
Query: 195 NVLIDALAKNGKVDEALAVFKKMEDEGCDQTVYTFTILINGLFKEHRNEEALKLWDLMID 374
N L K G+V +A F+ ME T+ L+ + + + L L+ M +
Sbjct: 163 NTLFKGYCKAGQVQKAFDKFRAMEARNVQPDKVTYMTLMQACYSKEDFDSCLSLYHEMEE 222
Query: 375 KGITPTAASCRALATGLCLSGKVARACKILDELAPMGIVLETA-FEDMMNVLCKAGRIAE 551
K + + + +GLC GK + +++ G A + M++ K G + E
Sbjct: 223 KRLEIPPHAYTLVISGLCKRGKCMEGYAVFNDMIQKGYGANVAIYTAMIDSYSKCGSMEE 282
Query: 552 ACKLADGVIDRGREIPGRVRTIMINSLRKAGNADLAM 662
A +L + G E ++IN L + G D AM
Sbjct: 283 AVRLFKRMESDGLEPDEVSYGVIINGLCRNGRMDEAM 319
Score = 72.8 bits (177), Expect = 2e-10
Identities = 55/224 (24%), Positives = 103/224 (45%), Gaps = 2/224 (0%)
Frame = +3
Query: 30 ALQWFEYC-KRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLI 206
AL++F + K+ + Y SLI+ L G L+ A ++F E+ ++ N LI
Sbjct: 37 ALRFFYWAGKQKKYNQKLECYVSLIELLSLCGDLDCARRVFSELEGMSFLMNASSANSLI 96
Query: 207 DALAKNGKVDEALAVFKKMEDEGCDQTVYTFTILINGLFKEHRNEEALKLWDLMIDKGIT 386
+ G V+E L V+++M++ G D ++YT+ L+NGL E A ++++ M + +
Sbjct: 97 KSFGSVGMVEELLWVWRQMKENGIDPSLYTYNFLMNGLVNSMFIESAERVFEAMENGKVE 156
Query: 387 PTAASCRALATGLCLSGKVARACKILDELAPMGIVLETAFEDMMNVLCKAGRIAEAC-KL 563
P + L G C +G+V +A + + + + C + ++C L
Sbjct: 157 PDIVTYNTLFKGYCKAGQVQKAFDKFRAMEARNVQPDKVTYMTLMQACYSKEDFDSCLSL 216
Query: 564 ADGVIDRGREIPGRVRTIMINSLRKAGNADLAMKLMHSKIGIGY 695
+ ++ EIP T++I+ L K G + + I GY
Sbjct: 217 YHEMEEKRLEIPPHAYTLVISGLCKRGKCMEGYAVFNDMIQKGY 260
Score = 69.3 bits (168), Expect = 2e-09
Identities = 74/301 (24%), Positives = 123/301 (40%), Gaps = 10/301 (3%)
Frame = +3
Query: 15 GRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCY 194
G L+ A + F + + MN +SLI G G +EE ++ +M E G Y Y
Sbjct: 68 GDLDCARRVFSELEGMSFLMNASSANSLIKSFGSVGMVEELLWVWRQMKENGIDPSLYTY 127
Query: 195 NVLIDALAKNGKVDEALAVFKKMEDEGCDQTVYTFTILINGLFKEHRNEEALKLWDLMID 374
N L++ L + ++ A VF+ ME+ + + T+ L G K + ++A + M
Sbjct: 128 NFLMNGLVNSMFIESAERVFEAMENGKVEPDIVTYNTLFKGYCKAGQVQKAFDKFRAMEA 187
Query: 375 KGITPTAASCRALATGLCLSGKVARAC-KILDELAPMGIVLET-AFEDMMNVLCKAGRIA 548
+ + P + L C S + +C + E+ + + A+ +++ LCK G+
Sbjct: 188 RNVQPDKVTYMTLMQA-CYSKEDFDSCLSLYHEMEEKRLEIPPHAYTLVISGLCKRGKCM 246
Query: 549 EACKLADGVIDRGREIPGRVRTIMINSLRKAGNADLAMKLMHSKIGIGYHRMRSVKKRVK 728
E + + +I +G + T MI+S K G+ + A++L G V V
Sbjct: 247 EGYAVFNDMIQKGYGANVAIYTAMIDSYSKCGSMEEAVRLFKRMESDGL-EPDEVSYGVI 305
Query: 729 FRTLVES*SEAENNGY-EFFT*MNLLANS-------NDKGILSNVEICSTAFSSHHQGGL 884
L + E GY EF + NS N G NVE T F G
Sbjct: 306 INGLCRNGRMDEAMGYFEFCKGKGMPINSMFYSSLINGFGKAGNVEEAQTIFEEMVDNGC 365
Query: 885 P 887
P
Sbjct: 366 P 366
>ref|XP_002532772.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223527482|gb|EEF29611.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 647
Score = 405 bits (1042), Expect = e-111
Identities = 194/249 (77%), Positives = 227/249 (91%)
Frame = +3
Query: 3 LCKSGRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRD 182
LCKSGRL+EAL++ E+C VA+N + YSSLIDGLGK+GR++EAE++F EMV+KGCP D
Sbjct: 399 LCKSGRLDEALEYMEFCSGKGVAVNAMFYSSLIDGLGKSGRVDEAERIFYEMVKKGCPPD 458
Query: 183 SYCYNVLIDALAKNGKVDEALAVFKKMEDEGCDQTVYTFTILINGLFKEHRNEEALKLWD 362
SYCYN LIDALAK GK+DEALA+ K+ME +GCDQTVYT+TILI GLF+EHRNEEAL LWD
Sbjct: 459 SYCYNALIDALAKCGKIDEALALSKRMEVDGCDQTVYTYTILITGLFREHRNEEALTLWD 518
Query: 363 LMIDKGITPTAASCRALATGLCLSGKVARACKILDELAPMGIVLETAFEDMMNVLCKAGR 542
LMIDKGITPTAA+ RAL+TGLCLSGKVARACKILDE+APMG++ ETAF+DM+N+LCKAGR
Sbjct: 519 LMIDKGITPTAAAFRALSTGLCLSGKVARACKILDEMAPMGVIPETAFDDMINILCKAGR 578
Query: 543 IAEACKLADGVIDRGREIPGRVRTIMINSLRKAGNADLAMKLMHSKIGIGYHRMRSVKKR 722
I EACKLADG++DRGREIPGRVRT++IN+LRKAGNADLA+KLM SKIGIGY RM SVK+R
Sbjct: 579 IKEACKLADGIVDRGREIPGRVRTVLINALRKAGNADLALKLMRSKIGIGYDRMGSVKRR 638
Query: 723 VKFRTLVES 749
VKFR LVES
Sbjct: 639 VKFRILVES 647
Score = 98.2 bits (243), Expect = 4e-18
Identities = 65/204 (31%), Positives = 104/204 (50%), Gaps = 1/204 (0%)
Frame = +3
Query: 84 LYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEALAVFKKM 263
+YS +I GL K G+ E +FE M+ KGC + Y LID+ AK G + EA+ +FK+M
Sbjct: 321 VYSLVIGGLCKDGKRVEGYTVFENMISKGCKANVAIYTALIDSNAKCGNMGEAMLLFKRM 380
Query: 264 EDEGCDQTVYTFTILINGLFKEHRNEEALKLWDLMIDKGITPTAASCRALATGLCLSGKV 443
+ EG + T+ +++N L K R +EAL+ + KG+ A +L GL SG+V
Sbjct: 381 KKEGLEPDEVTYGVIVNSLCKSGRLDEALEYMEFCSGKGVAVNAMFYSSLIDGLGKSGRV 440
Query: 444 ARACKILDELAPMGIVLET-AFEDMMNVLCKAGRIAEACKLADGVIDRGREIPGRVRTIM 620
A +I E+ G ++ + +++ L K G+I EA L+ + G + TI+
Sbjct: 441 DEAERIFYEMVKKGCPPDSYCYNALIDALAKCGKIDEALALSKRMEVDGCDQTVYTYTIL 500
Query: 621 INSLRKAGNADLAMKLMHSKIGIG 692
I L + + A+ L I G
Sbjct: 501 ITGLFREHRNEEALTLWDLMIDKG 524
Score = 93.6 bits (231), Expect = 1e-16
Identities = 60/222 (27%), Positives = 108/222 (48%), Gaps = 1/222 (0%)
Frame = +3
Query: 6 CKSGRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDS 185
C+ G+ +A + + + NVA + + Y +LI G + L+ EM EKG
Sbjct: 260 CEVGKTRKAFEKLKAMELRNVAPDKITYMTLIQACYAEGDFDSCLGLYHEMDEKGLEIPP 319
Query: 186 YCYNVLIDALAKNGKVDEALAVFKKMEDEGCDQTVYTFTILINGLFKEHRNEEALKLWDL 365
+ Y+++I L K+GK E VF+ M +GC V +T LI+ K EA+ L+
Sbjct: 320 HVYSLVIGGLCKDGKRVEGYTVFENMISKGCKANVAIYTALIDSNAKCGNMGEAMLLFKR 379
Query: 366 MIDKGITPTAASCRALATGLCLSGKVARACKILDELAPMGIVLETAF-EDMMNVLCKAGR 542
M +G+ P + + LC SG++ A + ++ + G+ + F +++ L K+GR
Sbjct: 380 MKKEGLEPDEVTYGVIVNSLCKSGRLDEALEYMEFCSGKGVAVNAMFYSSLIDGLGKSGR 439
Query: 543 IAEACKLADGVIDRGREIPGRVRTIMINSLRKAGNADLAMKL 668
+ EA ++ ++ +G +I++L K G D A+ L
Sbjct: 440 VDEAERIFYEMVKKGCPPDSYCYNALIDALAKCGKIDEALAL 481
Score = 78.6 bits (192), Expect = 3e-12
Identities = 54/207 (26%), Positives = 100/207 (48%), Gaps = 2/207 (0%)
Frame = +3
Query: 30 ALQWFEYC-KRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLI 206
A+++F + K+ N+ Y SLID L G L+ + +F + E G Y N LI
Sbjct: 127 AIRFFTWAGKQKKYTHNLECYVSLIDVLATNGVLDSVKSVFSKFKEMGLIMTVYSSNSLI 186
Query: 207 DALAKNGKVDEALAVFKKMEDEGCDQTVYTFTILINGLFKEHRNEEALKLWDLMIDKGIT 386
+ G V+E L V+++M++ G + +++++ L+NGL E A +++++M + I
Sbjct: 187 KSFGNLGMVEEVLWVWRRMKENGIEPSLFSYNFLVNGLVNSKFIESAERVFEVMENGKIG 246
Query: 387 PTAASCRALATGLCLSGKVARACKILDELAPMGIVLETAFEDMMNVLCKAGRIAEAC-KL 563
P + + G C GK +A + L + + + + C A ++C L
Sbjct: 247 PDVVTYNTMIKGYCEVGKTRKAFEKLKAMELRNVAPDKITYMTLIQACYAEGDFDSCLGL 306
Query: 564 ADGVIDRGREIPGRVRTIMINSLRKAG 644
+ ++G EIP V +++I L K G
Sbjct: 307 YHEMDEKGLEIPPHVYSLVIGGLCKDG 333
Score = 78.2 bits (191), Expect = 4e-12
Identities = 61/262 (23%), Positives = 111/262 (42%), Gaps = 36/262 (13%)
Frame = +3
Query: 15 GRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEM------------ 158
G +EE L + K N + ++ Y+ L++GL + +E AE++FE M
Sbjct: 193 GMVEEVLWVWRRMKENGIEPSLFSYNFLVNGLVNSKFIESAERVFEVMENGKIGPDVVTY 252
Query: 159 -------VEKGCPR----------------DSYCYNVLIDALAKNGKVDEALAVFKKMED 269
E G R D Y LI A G D L ++ +M++
Sbjct: 253 NTMIKGYCEVGKTRKAFEKLKAMELRNVAPDKITYMTLIQACYAEGDFDSCLGLYHEMDE 312
Query: 270 EGCDQTVYTFTILINGLFKEHRNEEALKLWDLMIDKGITPTAASCRALATGLCLSGKVAR 449
+G + + ++++I GL K+ + E +++ MI KG A AL G +
Sbjct: 313 KGLEIPPHVYSLVIGGLCKDGKRVEGYTVFENMISKGCKANVAIYTALIDSNAKCGNMGE 372
Query: 450 ACKILDELAPMGIVL-ETAFEDMMNVLCKAGRIAEACKLADGVIDRGREIPGRVRTIMIN 626
A + + G+ E + ++N LCK+GR+ EA + + +G + + +I+
Sbjct: 373 AMLLFKRMKKEGLEPDEVTYGVIVNSLCKSGRLDEALEYMEFCSGKGVAVNAMFYSSLID 432
Query: 627 SLRKAGNADLAMKLMHSKIGIG 692
L K+G D A ++ + + G
Sbjct: 433 GLGKSGRVDEAERIFYEMVKKG 454
Score = 70.1 bits (170), Expect = 1e-09
Identities = 53/223 (23%), Positives = 93/223 (41%), Gaps = 1/223 (0%)
Frame = +3
Query: 3 LCKSGRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRD 182
L +G L+ F K + M V +SLI G G +EE ++ M E G
Sbjct: 154 LATNGVLDSVKSVFSKFKEMGLIMTVYSSNSLIKSFGNLGMVEEVLWVWRRMKENGIEPS 213
Query: 183 SYCYNVLIDALAKNGKVDEALAVFKKMEDEGCDQTVYTFTILINGLFKEHRNEEALKLWD 362
+ YN L++ L + ++ A VF+ ME+ V T+ +I G + + +A +
Sbjct: 214 LFSYNFLVNGLVNSKFIESAERVFEVMENGKIGPDVVTYNTMIKGYCEVGKTRKAFEKLK 273
Query: 363 LMIDKGITPTAASCRALATGLCLSGKVARACKILDELAPMGIVLET-AFEDMMNVLCKAG 539
M + + P + L G + E+ G+ + + ++ LCK G
Sbjct: 274 AMELRNVAPDKITYMTLIQACYAEGDFDSCLGLYHEMDEKGLEIPPHVYSLVIGGLCKDG 333
Query: 540 RIAEACKLADGVIDRGREIPGRVRTIMINSLRKAGNADLAMKL 668
+ E + + +I +G + + T +I+S K GN AM L
Sbjct: 334 KRVEGYTVFENMISKGCKANVAIYTALIDSNAKCGNMGEAMLL 376
>ref|XP_002892169.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297338011|gb|EFH68428.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 662
Score = 402 bits (1032), Expect = e-109
Identities = 192/250 (76%), Positives = 226/250 (90%), Gaps = 1/250 (0%)
Frame = +3
Query: 3 LCKSGRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRD 182
LCK+GR+EEA+ +F+ C+ N +A+N + YSSLIDGLGKAGR++EAE+LFEEM EKGC RD
Sbjct: 407 LCKNGRVEEAMDYFQTCRFNGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRD 466
Query: 183 SYCYNVLIDALAKNGKVDEALAVFKKMEDE-GCDQTVYTFTILINGLFKEHRNEEALKLW 359
SYCYN LIDA K+GKVDEALA+FK+ME+E GCDQTVYT+TILI+G+FKEHRNEEALKLW
Sbjct: 467 SYCYNALIDAFTKHGKVDEALALFKRMEEEEGCDQTVYTYTILISGMFKEHRNEEALKLW 526
Query: 360 DLMIDKGITPTAASCRALATGLCLSGKVARACKILDELAPMGIVLETAFEDMMNVLCKAG 539
D+MIDKGITPTAA RAL+TGLCLSGKVARACKILDELAPMG++L+ A EDM+N LCKAG
Sbjct: 527 DMMIDKGITPTAACLRALSTGLCLSGKVARACKILDELAPMGVILDAACEDMINTLCKAG 586
Query: 540 RIAEACKLADGVIDRGREIPGRVRTIMINSLRKAGNADLAMKLMHSKIGIGYHRMRSVKK 719
RI EACKLADG+ +RGRE+PGR+RT+MIN+LRK G ADLAMKLMHSKIGIGY RM SVK+
Sbjct: 587 RIKEACKLADGITERGREVPGRIRTVMINALRKVGKADLAMKLMHSKIGIGYERMGSVKR 646
Query: 720 RVKFRTLVES 749
RVKF TL+E+
Sbjct: 647 RVKFTTLLET 656
Score = 102 bits (254), Expect = 2e-19
Identities = 61/222 (27%), Positives = 110/222 (49%), Gaps = 1/222 (0%)
Frame = +3
Query: 6 CKSGRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDS 185
CK+G+ ++AL+ + + + + Y ++I L++EM EKG
Sbjct: 268 CKAGQTQKALEKLRVMETKGLEADKITYMTMIQACYADSDFSSCVALYQEMDEKGLQVPP 327
Query: 186 YCYNVLIDALAKNGKVDEALAVFKKMEDEGCDQTVYTFTILINGLFKEHRNEEALKLWDL 365
+ ++++I L K GK++E AVF+ M +G V +T+LI+G K E+A++L
Sbjct: 328 HAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHR 387
Query: 366 MIDKGITPTAASCRALATGLCLSGKVARACKILDELAPMGIVLETAF-EDMMNVLCKAGR 542
MID+G P + + GLC +G+V A G+ + + F +++ L KAGR
Sbjct: 388 MIDEGFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTCRFNGLAINSMFYSSLIDGLGKAGR 447
Query: 543 IAEACKLADGVIDRGREIPGRVRTIMINSLRKAGNADLAMKL 668
+ EA +L + + ++G +I++ K G D A+ L
Sbjct: 448 VDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEALAL 489
Score = 83.2 bits (204), Expect = 1e-13
Identities = 66/256 (25%), Positives = 108/256 (42%), Gaps = 36/256 (14%)
Frame = +3
Query: 9 KSGRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSY 188
K G +EE L + K N + + Y+ L++GL A ++ AE++FE M D
Sbjct: 199 KLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDVV 258
Query: 189 CYNVLIDALAKNGKVDEAL-----------------------------------AVFKKM 263
YN +I K G+ +AL A++++M
Sbjct: 259 TYNTMIKGYCKAGQTQKALEKLRVMETKGLEADKITYMTMIQACYADSDFSSCVALYQEM 318
Query: 264 EDEGCDQTVYTFTILINGLFKEHRNEEALKLWDLMIDKGITPTAASCRALATGLCLSGKV 443
+++G + F+++I GL KE + E +++ MI KG P A L G +G V
Sbjct: 319 DEKGLQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKTGSV 378
Query: 444 ARACKILDELAPMGIVLE-TAFEDMMNVLCKAGRIAEACKLADGVIDRGREIPGRVRTIM 620
A ++L + G + + ++N LCK GR+ EA G I + +
Sbjct: 379 EDAIRLLHRMIDEGFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTCRFNGLAINSMFYSSL 438
Query: 621 INSLRKAGNADLAMKL 668
I+ L KAG D A +L
Sbjct: 439 IDGLGKAGRVDEAERL 454
Score = 80.5 bits (197), Expect = 9e-13
Identities = 63/271 (23%), Positives = 118/271 (43%), Gaps = 41/271 (15%)
Frame = +3
Query: 9 KSGRLEEA--LQWFEYC---KRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGC 173
KS + E + W +C K+ N+ Y SL+D L A ++ + E+ +
Sbjct: 124 KSDEIREKPDIAWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDVDRIRFICSEIRKFEF 183
Query: 174 PRDSYCYNVLIDALAKNGKVDEALAVFKKMEDEGCDQTVYTFTILINGLFKEHRNEEALK 353
P N LI + K G V+E L V++KM++ G + T+YT+ L+NGL + A +
Sbjct: 184 PMTVSPGNSLIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAER 243
Query: 354 LWDLMIDKGITPTAASCRALATGLCLSGKVARACKILDELAPMGI--------------- 488
++++M I P + + G C +G+ +A + L + G+
Sbjct: 244 VFEVMESGRIKPDVVTYNTMIKGYCKAGQTQKALEKLRVMETKGLEADKITYMTMIQACY 303
Query: 489 ---------------------VLETAFEDMMNVLCKAGRIAEACKLADGVIDRGREIPGR 605
V AF ++ LCK G++ E + + +I +G +
Sbjct: 304 ADSDFSSCVALYQEMDEKGLQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVA 363
Query: 606 VRTIMINSLRKAGNADLAMKLMHSKIGIGYH 698
+ T++I+ K G+ + A++L+H I G++
Sbjct: 364 IYTVLIDGYAKTGSVEDAIRLLHRMIDEGFN 394
>ref|XP_004155527.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Cucumis sativus]
Length = 653
Score = 400 bits (1028), Expect = e-109
Identities = 187/249 (75%), Positives = 224/249 (89%)
Frame = +3
Query: 3 LCKSGRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRD 182
LCKSGRL++ ++ F++C+ VA+N + Y+SLIDGLGKAGR+E+AE LFEEM EKGC RD
Sbjct: 405 LCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARD 464
Query: 183 SYCYNVLIDALAKNGKVDEALAVFKKMEDEGCDQTVYTFTILINGLFKEHRNEEALKLWD 362
SYCYN +IDALAK+GK+D+ALA+F +ME+EGCDQTVYTFTILI+GLFKEH+NEEA+K WD
Sbjct: 465 SYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWD 524
Query: 363 LMIDKGITPTAASCRALATGLCLSGKVARACKILDELAPMGIVLETAFEDMMNVLCKAGR 542
MIDKGITPT AS RALA GLCL GKVARACKILD+LAPMGI+ ETAFEDM+N LCKA R
Sbjct: 525 KMIDKGITPTVASFRALAIGLCLCGKVARACKILDDLAPMGIIPETAFEDMINTLCKAQR 584
Query: 543 IAEACKLADGVIDRGREIPGRVRTIMINSLRKAGNADLAMKLMHSKIGIGYHRMRSVKKR 722
I EACKLADG++DRGREIPGR+RT++IN+LRKAGN+DL +KLMHSKIGIGY RM S+K+R
Sbjct: 585 IKEACKLADGIVDRGREIPGRIRTVLINALRKAGNSDLVIKLMHSKIGIGYDRMGSIKRR 644
Query: 723 VKFRTLVES 749
VKFRTL+E+
Sbjct: 645 VKFRTLLEN 653
Score = 108 bits (271), Expect = 2e-21
Identities = 67/222 (30%), Positives = 113/222 (50%), Gaps = 1/222 (0%)
Frame = +3
Query: 6 CKSGRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDS 185
CK+G+L++A++ F + NV + + Y +LI + L+ EM E+G
Sbjct: 266 CKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPP 325
Query: 186 YCYNVLIDALAKNGKVDEALAVFKKMEDEGCDQTVYTFTILINGLFKEHRNEEALKLWDL 365
+ Y+++I L K K EA AVF+ M +GC V +T LI+ K EEA++L++
Sbjct: 326 HSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFER 385
Query: 366 MIDKGITPTAASCRALATGLCLSGKVARACKILDELAPMGIVLETAF-EDMMNVLCKAGR 542
M ++G P A + L GLC SG++ ++ D G+ + F +++ L KAGR
Sbjct: 386 MKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGR 445
Query: 543 IAEACKLADGVIDRGREIPGRVRTIMINSLRKAGNADLAMKL 668
I +A L + + ++G +I++L K G D A+ L
Sbjct: 446 IEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALAL 487
Score = 84.0 bits (206), Expect = 8e-14
Identities = 58/219 (26%), Positives = 103/219 (47%), Gaps = 1/219 (0%)
Frame = +3
Query: 15 GRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCY 194
G +EE L + K N + ++ Y+ L++GL + +E AEK+FE M D+ Y
Sbjct: 199 GLVEELLWVWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTY 258
Query: 195 NVLIDALAKNGKVDEALAVFKKMEDEGCDQTVYTFTILINGLFKEHRNEEALKLWDLMID 374
N++I K GK+ +A+ F+ ME + T+ LI + E + L L+ M +
Sbjct: 259 NIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEE 318
Query: 375 KGITPTAASCRALATGLCLSGKVARACKILDELAPMGIVLETA-FEDMMNVLCKAGRIAE 551
+G+ S + GLC K A + + + G A + +++ K G + E
Sbjct: 319 RGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEE 378
Query: 552 ACKLADGVIDRGREIPGRVRTIMINSLRKAGNADLAMKL 668
A +L + + + G E ++++N L K+G D M+L
Sbjct: 379 AMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMEL 417
Score = 71.2 bits (173), Expect = 5e-10
Identities = 56/224 (25%), Positives = 105/224 (46%), Gaps = 5/224 (2%)
Frame = +3
Query: 24 EEALQWFEYC-KRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNV 200
E A+++F + K+ + + SLI+ L + L + +F E+ ++G N
Sbjct: 131 EVAVRFFFWAGKQKKYVHKIECHVSLIELLTFSADLVKIRLVFFELKDRGLLMTESAANS 190
Query: 201 LIDALAKNGKVDEALAVFKKMEDEGCDQTVYTFTILINGLFKEHRNEEALKLWDLMIDKG 380
LI + G V+E L V+++M++ G D ++YT+ L+NGL E A K++++M
Sbjct: 191 LIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGK 250
Query: 381 ITPTAASCRALATGLCLSGKVARACKILDELAPMGIVLETAFEDMMNVLCKAGRIAEAC- 557
I P + + G C +GK+ +A + ++ + + + C + R + C
Sbjct: 251 IVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCL 310
Query: 558 KLADGVIDRGREIPGRVRTIMINSL---RKAGNADLAMKLMHSK 680
L + +RG EIP +++I L RK A + M+ K
Sbjct: 311 SLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQK 354
>ref|XP_004137016.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 400 bits (1028), Expect = e-109
Identities = 187/249 (75%), Positives = 224/249 (89%)
Frame = +3
Query: 3 LCKSGRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRD 182
LCKSGRL++ ++ F++C+ VA+N + Y+SLIDGLGKAGR+E+AE LFEEM EKGC RD
Sbjct: 403 LCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARD 462
Query: 183 SYCYNVLIDALAKNGKVDEALAVFKKMEDEGCDQTVYTFTILINGLFKEHRNEEALKLWD 362
SYCYN +IDALAK+GK+D+ALA+F +ME+EGCDQTVYTFTILI+GLFKEH+NEEA+K WD
Sbjct: 463 SYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWD 522
Query: 363 LMIDKGITPTAASCRALATGLCLSGKVARACKILDELAPMGIVLETAFEDMMNVLCKAGR 542
MIDKGITPT AS RALA GLCL GKVARACKILD+LAPMGI+ ETAFEDM+N LCKA R
Sbjct: 523 KMIDKGITPTVASFRALAIGLCLCGKVARACKILDDLAPMGIIPETAFEDMINTLCKAQR 582
Query: 543 IAEACKLADGVIDRGREIPGRVRTIMINSLRKAGNADLAMKLMHSKIGIGYHRMRSVKKR 722
I EACKLADG++DRGREIPGR+RT++IN+LRKAGN+DL +KLMHSKIGIGY RM S+K+R
Sbjct: 583 IKEACKLADGIVDRGREIPGRIRTVLINALRKAGNSDLVIKLMHSKIGIGYDRMGSIKRR 642
Query: 723 VKFRTLVES 749
VKFRTL+E+
Sbjct: 643 VKFRTLLEN 651
Score = 108 bits (271), Expect = 2e-21
Identities = 67/222 (30%), Positives = 113/222 (50%), Gaps = 1/222 (0%)
Frame = +3
Query: 6 CKSGRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDS 185
CK+G+L++A++ F + NV + + Y +LI + L+ EM E+G
Sbjct: 264 CKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPP 323
Query: 186 YCYNVLIDALAKNGKVDEALAVFKKMEDEGCDQTVYTFTILINGLFKEHRNEEALKLWDL 365
+ Y+++I L K K EA AVF+ M +GC V +T LI+ K EEA++L++
Sbjct: 324 HSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFER 383
Query: 366 MIDKGITPTAASCRALATGLCLSGKVARACKILDELAPMGIVLETAF-EDMMNVLCKAGR 542
M ++G P A + L GLC SG++ ++ D G+ + F +++ L KAGR
Sbjct: 384 MKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGR 443
Query: 543 IAEACKLADGVIDRGREIPGRVRTIMINSLRKAGNADLAMKL 668
I +A L + + ++G +I++L K G D A+ L
Sbjct: 444 IEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALAL 485
Score = 84.0 bits (206), Expect = 8e-14
Identities = 58/219 (26%), Positives = 103/219 (47%), Gaps = 1/219 (0%)
Frame = +3
Query: 15 GRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCY 194
G +EE L + K N + ++ Y+ L++GL + +E AEK+FE M D+ Y
Sbjct: 197 GLVEELLWVWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTY 256
Query: 195 NVLIDALAKNGKVDEALAVFKKMEDEGCDQTVYTFTILINGLFKEHRNEEALKLWDLMID 374
N++I K GK+ +A+ F+ ME + T+ LI + E + L L+ M +
Sbjct: 257 NIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEE 316
Query: 375 KGITPTAASCRALATGLCLSGKVARACKILDELAPMGIVLETA-FEDMMNVLCKAGRIAE 551
+G+ S + GLC K A + + + G A + +++ K G + E
Sbjct: 317 RGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEE 376
Query: 552 ACKLADGVIDRGREIPGRVRTIMINSLRKAGNADLAMKL 668
A +L + + + G E ++++N L K+G D M+L
Sbjct: 377 AMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMEL 415
Score = 71.2 bits (173), Expect = 5e-10
Identities = 56/224 (25%), Positives = 105/224 (46%), Gaps = 5/224 (2%)
Frame = +3
Query: 24 EEALQWFEYC-KRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNV 200
E A+++F + K+ + + SLI+ L + L + +F E+ ++G N
Sbjct: 129 EVAVRFFFWAGKQKKYVHKIECHVSLIELLTFSADLVKIRLVFFELKDRGLLMTESAANS 188
Query: 201 LIDALAKNGKVDEALAVFKKMEDEGCDQTVYTFTILINGLFKEHRNEEALKLWDLMIDKG 380
LI + G V+E L V+++M++ G D ++YT+ L+NGL E A K++++M
Sbjct: 189 LIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGK 248
Query: 381 ITPTAASCRALATGLCLSGKVARACKILDELAPMGIVLETAFEDMMNVLCKAGRIAEAC- 557
I P + + G C +GK+ +A + ++ + + + C + R + C
Sbjct: 249 IVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCL 308
Query: 558 KLADGVIDRGREIPGRVRTIMINSL---RKAGNADLAMKLMHSK 680
L + +RG EIP +++I L RK A + M+ K
Sbjct: 309 SLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQK 352
>ref|XP_006306944.1| hypothetical protein CARUB_v10008524mg [Capsella rubella]
gi|482575655|gb|EOA39842.1| hypothetical protein
CARUB_v10008524mg [Capsella rubella]
Length = 663
Score = 398 bits (1023), Expect = e-108
Identities = 190/249 (76%), Positives = 224/249 (89%), Gaps = 1/249 (0%)
Frame = +3
Query: 3 LCKSGRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRD 182
LCK+GR+EEAL +F+ C+ N A+N + YSSLIDGLGKAGR++EAE+LFEEM EKGC RD
Sbjct: 408 LCKNGRVEEALDYFQTCRFNGFAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRD 467
Query: 183 SYCYNVLIDALAKNGKVDEALAVFKKMEDE-GCDQTVYTFTILINGLFKEHRNEEALKLW 359
SYCYN LIDAL K+GKVDEA+ +FK+ME+E GCDQTVYT+TILI+G+FK+HRNEEALKLW
Sbjct: 468 SYCYNALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFKDHRNEEALKLW 527
Query: 360 DLMIDKGITPTAASCRALATGLCLSGKVARACKILDELAPMGIVLETAFEDMMNVLCKAG 539
D+MIDKGITPTAA RAL+TGLCLSGKVARACKILDELAPMG++L+ A EDM+N LCKAG
Sbjct: 528 DMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAACEDMINTLCKAG 587
Query: 540 RIAEACKLADGVIDRGREIPGRVRTIMINSLRKAGNADLAMKLMHSKIGIGYHRMRSVKK 719
RI EACKLADG+ +RGRE+PGR+RT+MIN+LRK G ADLAMKLMHSKIGIGY RM SVK+
Sbjct: 588 RIKEACKLADGITERGREVPGRIRTVMINALRKVGKADLAMKLMHSKIGIGYERMGSVKR 647
Query: 720 RVKFRTLVE 746
RVKF TL++
Sbjct: 648 RVKFTTLLD 656
Score = 102 bits (253), Expect = 3e-19
Identities = 64/222 (28%), Positives = 110/222 (49%), Gaps = 1/222 (0%)
Frame = +3
Query: 6 CKSGRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDS 185
CK+G+ ++A++ + + + V Y ++I L++EM EKG
Sbjct: 269 CKTGQTQKAIEKLRDMETRGLEADKVTYMTVIQACYADSDFGSCVALYQEMDEKGIQVPP 328
Query: 186 YCYNVLIDALAKNGKVDEALAVFKKMEDEGCDQTVYTFTILINGLFKEHRNEEALKLWDL 365
+ ++++I L K GK++E AVF+ M +G V +T+LI+G K E+A++L
Sbjct: 329 HVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHR 388
Query: 366 MIDKGITPTAASCRALATGLCLSGKVARACKILDELAPMGIVLETAF-EDMMNVLCKAGR 542
MID+G P + + GLC +G+V A G + + F +++ L KAGR
Sbjct: 389 MIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGFAINSMFYSSLIDGLGKAGR 448
Query: 543 IAEACKLADGVIDRGREIPGRVRTIMINSLRKAGNADLAMKL 668
I EA +L + + ++G +I++L K G D AM L
Sbjct: 449 IDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTL 490
Score = 94.7 bits (234), Expect = 4e-17
Identities = 62/205 (30%), Positives = 107/205 (52%), Gaps = 2/205 (0%)
Frame = +3
Query: 84 LYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEALAVFKKM 263
++S +I GL K G+L E +FE M+ KG + Y VLID AK+G V++A+ + +M
Sbjct: 330 VFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 389
Query: 264 EDEGCDQTVYTFTILINGLFKEHRNEEALKLWDLMIDKGITPTAASCRALATGLCLSGKV 443
DEG V T+++++NGL K R EEAL + G + +L GL +G++
Sbjct: 390 IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGFAINSMFYSSLIDGLGKAGRI 449
Query: 444 ARACKILDELAPMGIVLET-AFEDMMNVLCKAGRIAEACKLADGV-IDRGREIPGRVRTI 617
A ++ +E++ G ++ + +++ L K G++ EA L + + G + TI
Sbjct: 450 DEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTI 509
Query: 618 MINSLRKAGNADLAMKLMHSKIGIG 692
+I+ + K + A+KL I G
Sbjct: 510 LISGMFKDHRNEEALKLWDMMIDKG 534
Score = 81.3 bits (199), Expect = 5e-13
Identities = 57/243 (23%), Positives = 110/243 (45%), Gaps = 36/243 (14%)
Frame = +3
Query: 75 NVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEALAVF 254
N+ Y SL+D L A ++ L E+ + P N LI + K G V+E L V+
Sbjct: 152 NLECYVSLVDVLALAKDVDRIRFLCSEIRKFEFPMTVAAANALIKSFGKLGMVEELLWVW 211
Query: 255 KKMEDEGCDQTVYTFTILINGLFKEHRNEEALKLWDLMIDKGITPTAASCRALATGLCLS 434
+KM++ G + T+YT+ L+NGL + A +++ +M I P + + G C +
Sbjct: 212 RKMKENGIEPTLYTYNFLMNGLVSSMFIDSAERVFGVMESGRIKPDVVTYNTMIKGYCKT 271
Query: 435 GKVARACKILDELAPMGI---------VLETAFED------------------------- 512
G+ +A + L ++ G+ V++ + D
Sbjct: 272 GQTQKAIEKLRDMETRGLEADKVTYMTVIQACYADSDFGSCVALYQEMDEKGIQVPPHVF 331
Query: 513 --MMNVLCKAGRIAEACKLADGVIDRGREIPGRVRTIMINSLRKAGNADLAMKLMHSKIG 686
++ LCK G++ E + + +I +G + + T++I+ K+G+ + A++L+H I
Sbjct: 332 SLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMID 391
Query: 687 IGY 695
G+
Sbjct: 392 EGF 394
Score = 74.3 bits (181), Expect = 6e-11
Identities = 51/219 (23%), Positives = 97/219 (44%), Gaps = 1/219 (0%)
Frame = +3
Query: 9 KSGRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSY 188
K G +EE L + K N + + Y+ L++GL + ++ AE++F M D
Sbjct: 200 KLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSSMFIDSAERVFGVMESGRIKPDVV 259
Query: 189 CYNVLIDALAKNGKVDEALAVFKKMEDEGCDQTVYTFTILINGLFKEHRNEEALKLWDLM 368
YN +I K G+ +A+ + ME G + T+ +I + + + L+ M
Sbjct: 260 TYNTMIKGYCKTGQTQKAIEKLRDMETRGLEADKVTYMTVIQACYADSDFGSCVALYQEM 319
Query: 369 IDKGITPTAASCRALATGLCLSGKVARACKILDELAPMGIVLETA-FEDMMNVLCKAGRI 545
+KGI + GLC GK+ + + + G A + +++ K+G +
Sbjct: 320 DEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSV 379
Query: 546 AEACKLADGVIDRGREIPGRVRTIMINSLRKAGNADLAM 662
+A +L +ID G + ++++N L K G + A+
Sbjct: 380 EDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEAL 418
>ref|XP_006418224.1| hypothetical protein EUTSA_v10007014mg [Eutrema salsugineum]
gi|557095995|gb|ESQ36577.1| hypothetical protein
EUTSA_v10007014mg [Eutrema salsugineum]
Length = 661
Score = 396 bits (1018), Expect = e-108
Identities = 190/250 (76%), Positives = 224/250 (89%), Gaps = 1/250 (0%)
Frame = +3
Query: 3 LCKSGRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRD 182
LCK+GR+EEAL F+ C+ +A+N + YSSLIDGLGKAGR++EAE+LFEEM EKGC RD
Sbjct: 407 LCKNGRVEEALHCFDTCRFKGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRD 466
Query: 183 SYCYNVLIDALAKNGKVDEALAVFKKMEDE-GCDQTVYTFTILINGLFKEHRNEEALKLW 359
SYCYN LIDA K+GKVDEAL +FK+ME+E GCDQTVYT+TILI+G+FKEHRNEEAL+LW
Sbjct: 467 SYCYNALIDAFTKSGKVDEALGLFKRMEEEEGCDQTVYTYTILISGMFKEHRNEEALELW 526
Query: 360 DLMIDKGITPTAASCRALATGLCLSGKVARACKILDELAPMGIVLETAFEDMMNVLCKAG 539
D+MIDKGITPTAA RAL+TGLCLSGKVARACKILDELAPMG++L+ A EDM+N LCKAG
Sbjct: 527 DMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAACEDMINTLCKAG 586
Query: 540 RIAEACKLADGVIDRGREIPGRVRTIMINSLRKAGNADLAMKLMHSKIGIGYHRMRSVKK 719
RI EACKLADG+ +RGRE+PGR+RT+MIN+LRK G +DLAMKLMHSKIGIGY RM SVK+
Sbjct: 587 RIKEACKLADGITERGREVPGRIRTVMINALRKVGKSDLAMKLMHSKIGIGYERMGSVKR 646
Query: 720 RVKFRTLVES 749
RVKFRTL+E+
Sbjct: 647 RVKFRTLLEN 656
Score = 100 bits (248), Expect = 1e-18
Identities = 60/222 (27%), Positives = 111/222 (50%), Gaps = 1/222 (0%)
Frame = +3
Query: 6 CKSGRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDS 185
CK+G+ ++A++ + + + + Y ++I L++EM EKG
Sbjct: 268 CKAGQTQKAMEKLRDLETRGLEADKITYMTMIQACYADSDFSSCVALYQEMDEKGIQVPP 327
Query: 186 YCYNVLIDALAKNGKVDEALAVFKKMEDEGCDQTVYTFTILINGLFKEHRNEEALKLWDL 365
+ ++++I L K GK++E AVF+ M +G V +T+LI+G K E+A+ L
Sbjct: 328 HAFSLVIGGLCKEGKLNEGHAVFENMVRKGSKPNVAIYTVLIDGYAKYGSVEDAIGLLQR 387
Query: 366 MIDKGITPTAASCRALATGLCLSGKVARACKILDELAPMGIVLETAF-EDMMNVLCKAGR 542
MI++G P + + GLC +G+V A D G+ + + F +++ L KAGR
Sbjct: 388 MINEGFEPDVVTYSVVVNGLCKNGRVEEALHCFDTCRFKGLAINSMFYSSLIDGLGKAGR 447
Query: 543 IAEACKLADGVIDRGREIPGRVRTIMINSLRKAGNADLAMKL 668
+ EA +L + + ++G +I++ K+G D A+ L
Sbjct: 448 VDEAERLFEEMSEKGCTRDSYCYNALIDAFTKSGKVDEALGL 489
Score = 98.6 bits (244), Expect = 3e-18
Identities = 65/208 (31%), Positives = 110/208 (52%), Gaps = 6/208 (2%)
Frame = +3
Query: 87 YSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEALAVFKKME 266
+S +I GL K G+L E +FE MV KG + Y VLID AK G V++A+ + ++M
Sbjct: 330 FSLVIGGLCKEGKLNEGHAVFENMVRKGSKPNVAIYTVLIDGYAKYGSVEDAIGLLQRMI 389
Query: 267 DEGCDQTVYTFTILINGLFKEHRNEEALKLWDLMIDKGITPTAASCRALATGLCLSGKVA 446
+EG + V T+++++NGL K R EEAL +D KG+ + +L GL +G+V
Sbjct: 390 NEGFEPDVVTYSVVVNGLCKNGRVEEALHCFDTCRFKGLAINSMFYSSLIDGLGKAGRVD 449
Query: 447 RACKILDELAPMGIVLET-AFEDMMNVLCKAGRIAEACKLADGVIDRGREIPG-----RV 608
A ++ +E++ G ++ + +++ K+G++ EA G+ R E G
Sbjct: 450 EAERLFEEMSEKGCTRDSYCYNALIDAFTKSGKVDEAL----GLFKRMEEEEGCDQTVYT 505
Query: 609 RTIMINSLRKAGNADLAMKLMHSKIGIG 692
TI+I+ + K + A++L I G
Sbjct: 506 YTILISGMFKEHRNEEALELWDMMIDKG 533
Score = 80.5 bits (197), Expect = 9e-13
Identities = 64/256 (25%), Positives = 108/256 (42%), Gaps = 36/256 (14%)
Frame = +3
Query: 9 KSGRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSY 188
K G +EE L + K N + + Y+ L++GL + ++ AE++FE M D
Sbjct: 199 KLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSSMFIDSAERVFEVMEGGRIKPDVV 258
Query: 189 CYNVLIDALAKNGKVDEAL-----------------------------------AVFKKM 263
YN +I K G+ +A+ A++++M
Sbjct: 259 TYNTMIKGYCKAGQTQKAMEKLRDLETRGLEADKITYMTMIQACYADSDFSSCVALYQEM 318
Query: 264 EDEGCDQTVYTFTILINGLFKEHRNEEALKLWDLMIDKGITPTAASCRALATGLCLSGKV 443
+++G + F+++I GL KE + E +++ M+ KG P A L G G V
Sbjct: 319 DEKGIQVPPHAFSLVIGGLCKEGKLNEGHAVFENMVRKGSKPNVAIYTVLIDGYAKYGSV 378
Query: 444 ARACKILDELAPMGIVLE-TAFEDMMNVLCKAGRIAEACKLADGVIDRGREIPGRVRTIM 620
A +L + G + + ++N LCK GR+ EA D +G I + +
Sbjct: 379 EDAIGLLQRMINEGFEPDVVTYSVVVNGLCKNGRVEEALHCFDTCRFKGLAINSMFYSSL 438
Query: 621 INSLRKAGNADLAMKL 668
I+ L KAG D A +L
Sbjct: 439 IDGLGKAGRVDEAERL 454
Score = 75.5 bits (184), Expect = 3e-11
Identities = 61/270 (22%), Positives = 115/270 (42%), Gaps = 41/270 (15%)
Frame = +3
Query: 9 KSGRLEE--ALQWFEYC---KRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGC 173
KS + E + W +C K+ + Y SL+D L A ++ + E+
Sbjct: 124 KSDEIREIPGVAWRFFCWAGKQKKYTHKLECYVSLVDVLALAKDVDRIRFVCSEIRRFEF 183
Query: 174 PRDSYCYNVLIDALAKNGKVDEALAVFKKMEDEGCDQTVYTFTILINGLFKEHRNEEALK 353
P + N LI + K G V+E L V++KM++ G + T+YT+ L+NGL + A +
Sbjct: 184 PMNVSAANSLIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSSMFIDSAER 243
Query: 354 LWDLMIDKGITPTAASCRALATGLCLSGKVARACKILDELAPMGI--------------- 488
++++M I P + + G C +G+ +A + L +L G+
Sbjct: 244 VFEVMEGGRIKPDVVTYNTMIKGYCKAGQTQKAMEKLRDLETRGLEADKITYMTMIQACY 303
Query: 489 ---------------------VLETAFEDMMNVLCKAGRIAEACKLADGVIDRGREIPGR 605
V AF ++ LCK G++ E + + ++ +G +
Sbjct: 304 ADSDFSSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGHAVFENMVRKGSKPNVA 363
Query: 606 VRTIMINSLRKAGNADLAMKLMHSKIGIGY 695
+ T++I+ K G+ + A+ L+ I G+
Sbjct: 364 IYTVLIDGYAKYGSVEDAIGLLQRMINEGF 393
>ref|NP_171855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180297|sp|Q9LR67.1|PPR9_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g03560, mitochondrial; Flags: Precursor
gi|9280662|gb|AAF86531.1|AC002560_24 F21B7.18
[Arabidopsis thaliana] gi|332189465|gb|AEE27586.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 660
Score = 395 bits (1014), Expect = e-107
Identities = 189/250 (75%), Positives = 224/250 (89%), Gaps = 1/250 (0%)
Frame = +3
Query: 3 LCKSGRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRD 182
LCK+GR+EEAL +F C+ + +A+N + YSSLIDGLGKAGR++EAE+LFEEM EKGC RD
Sbjct: 407 LCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRD 466
Query: 183 SYCYNVLIDALAKNGKVDEALAVFKKMEDE-GCDQTVYTFTILINGLFKEHRNEEALKLW 359
SYCYN LIDA K+ KVDEA+A+FK+ME+E GCDQTVYT+TIL++G+FKEHRNEEALKLW
Sbjct: 467 SYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLW 526
Query: 360 DLMIDKGITPTAASCRALATGLCLSGKVARACKILDELAPMGIVLETAFEDMMNVLCKAG 539
D+MIDKGITPTAA RAL+TGLCLSGKVARACKILDELAPMG++L+ A EDM+N LCKAG
Sbjct: 527 DMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAACEDMINTLCKAG 586
Query: 540 RIAEACKLADGVIDRGREIPGRVRTIMINSLRKAGNADLAMKLMHSKIGIGYHRMRSVKK 719
RI EACKLADG+ +RGRE+PGR+RT+MIN+LRK G ADLAMKLMHSKIGIGY RM SVK+
Sbjct: 587 RIKEACKLADGITERGREVPGRIRTVMINALRKVGKADLAMKLMHSKIGIGYERMGSVKR 646
Query: 720 RVKFRTLVES 749
RVKF TL+E+
Sbjct: 647 RVKFTTLLET 656
Score = 92.8 bits (229), Expect = 2e-16
Identities = 58/222 (26%), Positives = 107/222 (48%), Gaps = 1/222 (0%)
Frame = +3
Query: 6 CKSGRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDS 185
CK+G+ ++A++ + + + Y ++I L++EM EKG
Sbjct: 268 CKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPP 327
Query: 186 YCYNVLIDALAKNGKVDEALAVFKKMEDEGCDQTVYTFTILINGLFKEHRNEEALKLWDL 365
+ ++++I L K GK++E VF+ M +G V +T+LI+G K E+A++L
Sbjct: 328 HAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHR 387
Query: 366 MIDKGITPTAASCRALATGLCLSGKVARACKILDELAPMGIVLETAF-EDMMNVLCKAGR 542
MID+G P + + GLC +G+V A G+ + + F +++ L KAGR
Sbjct: 388 MIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGR 447
Query: 543 IAEACKLADGVIDRGREIPGRVRTIMINSLRKAGNADLAMKL 668
+ EA +L + + ++G +I++ K D A+ L
Sbjct: 448 VDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIAL 489
Score = 89.7 bits (221), Expect = 1e-15
Identities = 60/204 (29%), Positives = 105/204 (51%), Gaps = 2/204 (0%)
Frame = +3
Query: 87 YSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEALAVFKKME 266
+S +I GL K G+L E +FE M+ KG + Y VLID AK+G V++A+ + +M
Sbjct: 330 FSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMI 389
Query: 267 DEGCDQTVYTFTILINGLFKEHRNEEALKLWDLMIDKGITPTAASCRALATGLCLSGKVA 446
DEG V T+++++NGL K R EEAL + G+ + +L GL +G+V
Sbjct: 390 DEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVD 449
Query: 447 RACKILDELAPMGIVLET-AFEDMMNVLCKAGRIAEACKLADGV-IDRGREIPGRVRTIM 620
A ++ +E++ G ++ + +++ K ++ EA L + + G + TI+
Sbjct: 450 EAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTIL 509
Query: 621 INSLRKAGNADLAMKLMHSKIGIG 692
++ + K + A+KL I G
Sbjct: 510 LSGMFKEHRNEEALKLWDMMIDKG 533
Score = 82.0 bits (201), Expect = 3e-13
Identities = 62/270 (22%), Positives = 118/270 (43%), Gaps = 41/270 (15%)
Frame = +3
Query: 9 KSGRLEEA--LQWFEYC---KRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGC 173
KS + E + W +C K+ N+ Y SL+D L A ++ + E+ +
Sbjct: 124 KSDEIREKPDIAWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEF 183
Query: 174 PRDSYCYNVLIDALAKNGKVDEALAVFKKMEDEGCDQTVYTFTILINGLFKEHRNEEALK 353
P N LI + K G V+E L V++KM++ G + T+YT+ L+NGL + A +
Sbjct: 184 PMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAER 243
Query: 354 LWDLMIDKGITPTAASCRALATGLCLSGKVARACKILDELAPMGIVLET----------- 500
++++M I P + + G C +G+ +A + L ++ G +
Sbjct: 244 VFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACY 303
Query: 501 -------------------------AFEDMMNVLCKAGRIAEACKLADGVIDRGREIPGR 605
AF ++ LCK G++ E + + +I +G +
Sbjct: 304 ADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVA 363
Query: 606 VRTIMINSLRKAGNADLAMKLMHSKIGIGY 695
+ T++I+ K+G+ + A++L+H I G+
Sbjct: 364 IYTVLIDGYAKSGSVEDAIRLLHRMIDEGF 393
>dbj|BAF01006.1| hypothetical protein [Arabidopsis thaliana]
Length = 642
Score = 395 bits (1014), Expect = e-107
Identities = 189/250 (75%), Positives = 224/250 (89%), Gaps = 1/250 (0%)
Frame = +3
Query: 3 LCKSGRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRD 182
LCK+GR+EEAL +F C+ + +A+N + YSSLIDGLGKAGR++EAE+LFEEM EKGC RD
Sbjct: 389 LCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRD 448
Query: 183 SYCYNVLIDALAKNGKVDEALAVFKKMEDE-GCDQTVYTFTILINGLFKEHRNEEALKLW 359
SYCYN LIDA K+ KVDEA+A+FK+ME+E GCDQTVYT+TIL++G+FKEHRNEEALKLW
Sbjct: 449 SYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLW 508
Query: 360 DLMIDKGITPTAASCRALATGLCLSGKVARACKILDELAPMGIVLETAFEDMMNVLCKAG 539
D+MIDKGITPTAA RAL+TGLCLSGKVARACKILDELAPMG++L+ A EDM+N LCKAG
Sbjct: 509 DMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAACEDMINTLCKAG 568
Query: 540 RIAEACKLADGVIDRGREIPGRVRTIMINSLRKAGNADLAMKLMHSKIGIGYHRMRSVKK 719
RI EACKLADG+ +RGRE+PGR+RT+MIN+LRK G ADLAMKLMHSKIGIGY RM SVK+
Sbjct: 569 RIKEACKLADGITERGREVPGRIRTVMINALRKVGKADLAMKLMHSKIGIGYERMGSVKR 628
Query: 720 RVKFRTLVES 749
RVKF TL+E+
Sbjct: 629 RVKFTTLLET 638
Score = 92.8 bits (229), Expect = 2e-16
Identities = 58/222 (26%), Positives = 107/222 (48%), Gaps = 1/222 (0%)
Frame = +3
Query: 6 CKSGRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDS 185
CK+G+ ++A++ + + + Y ++I L++EM EKG
Sbjct: 250 CKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPP 309
Query: 186 YCYNVLIDALAKNGKVDEALAVFKKMEDEGCDQTVYTFTILINGLFKEHRNEEALKLWDL 365
+ ++++I L K GK++E VF+ M +G V +T+LI+G K E+A++L
Sbjct: 310 HAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHR 369
Query: 366 MIDKGITPTAASCRALATGLCLSGKVARACKILDELAPMGIVLETAF-EDMMNVLCKAGR 542
MID+G P + + GLC +G+V A G+ + + F +++ L KAGR
Sbjct: 370 MIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGR 429
Query: 543 IAEACKLADGVIDRGREIPGRVRTIMINSLRKAGNADLAMKL 668
+ EA +L + + ++G +I++ K D A+ L
Sbjct: 430 VDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIAL 471
Score = 89.7 bits (221), Expect = 1e-15
Identities = 60/204 (29%), Positives = 105/204 (51%), Gaps = 2/204 (0%)
Frame = +3
Query: 87 YSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEALAVFKKME 266
+S +I GL K G+L E +FE M+ KG + Y VLID AK+G V++A+ + +M
Sbjct: 312 FSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMI 371
Query: 267 DEGCDQTVYTFTILINGLFKEHRNEEALKLWDLMIDKGITPTAASCRALATGLCLSGKVA 446
DEG V T+++++NGL K R EEAL + G+ + +L GL +G+V
Sbjct: 372 DEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVD 431
Query: 447 RACKILDELAPMGIVLET-AFEDMMNVLCKAGRIAEACKLADGV-IDRGREIPGRVRTIM 620
A ++ +E++ G ++ + +++ K ++ EA L + + G + TI+
Sbjct: 432 EAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTIL 491
Query: 621 INSLRKAGNADLAMKLMHSKIGIG 692
++ + K + A+KL I G
Sbjct: 492 LSGMFKEHRNEEALKLWDMMIDKG 515
Score = 82.0 bits (201), Expect = 3e-13
Identities = 62/270 (22%), Positives = 118/270 (43%), Gaps = 41/270 (15%)
Frame = +3
Query: 9 KSGRLEEA--LQWFEYC---KRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGC 173
KS + E + W +C K+ N+ Y SL+D L A ++ + E+ +
Sbjct: 106 KSDEIREKPDIAWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEF 165
Query: 174 PRDSYCYNVLIDALAKNGKVDEALAVFKKMEDEGCDQTVYTFTILINGLFKEHRNEEALK 353
P N LI + K G V+E L V++KM++ G + T+YT+ L+NGL + A +
Sbjct: 166 PMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAER 225
Query: 354 LWDLMIDKGITPTAASCRALATGLCLSGKVARACKILDELAPMGIVLET----------- 500
++++M I P + + G C +G+ +A + L ++ G +
Sbjct: 226 VFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACY 285
Query: 501 -------------------------AFEDMMNVLCKAGRIAEACKLADGVIDRGREIPGR 605
AF ++ LCK G++ E + + +I +G +
Sbjct: 286 ADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVA 345
Query: 606 VRTIMINSLRKAGNADLAMKLMHSKIGIGY 695
+ T++I+ K+G+ + A++L+H I G+
Sbjct: 346 IYTVLIDGYAKSGSVEDAIRLLHRMIDEGF 375
>gb|ESW05301.1| hypothetical protein PHAVU_011G168600g [Phaseolus vulgaris]
gi|561006308|gb|ESW05302.1| hypothetical protein
PHAVU_011G168600g [Phaseolus vulgaris]
Length = 620
Score = 394 bits (1013), Expect = e-107
Identities = 186/249 (74%), Positives = 222/249 (89%)
Frame = +3
Query: 3 LCKSGRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRD 182
LCKSG++EEA+ ++ +CK N VA+N V YSSLIDGLGK GR++EAE+LFEEM E+GCP D
Sbjct: 372 LCKSGKVEEAMDYYRFCKGNGVAVNAVFYSSLIDGLGKVGRVDEAERLFEEMAEEGCPPD 431
Query: 183 SYCYNVLIDALAKNGKVDEALAVFKKMEDEGCDQTVYTFTILINGLFKEHRNEEALKLWD 362
SYCYN L+D L K+G+VDEAL +F++ME EGC+ TVYTFTILI+ LFKE RNEEALKLW+
Sbjct: 432 SYCYNALMDGLCKSGRVDEALMLFRRMEQEGCEHTVYTFTILISELFKERRNEEALKLWE 491
Query: 363 LMIDKGITPTAASCRALATGLCLSGKVARACKILDELAPMGIVLETAFEDMMNVLCKAGR 542
MIDKG+TP AA RAL+ GLCLSGKVARAC++LDELAPMGIVLE A+EDM+ VLCKAGR
Sbjct: 492 EMIDKGVTPNAACFRALSFGLCLSGKVARACRVLDELAPMGIVLERAYEDMIGVLCKAGR 551
Query: 543 IAEACKLADGVIDRGREIPGRVRTIMINSLRKAGNADLAMKLMHSKIGIGYHRMRSVKKR 722
+ EACKLADG++DRGREIPG+VRT++IN+LRKAGNADLA+KLMHSKIGIGY RMRSVKKR
Sbjct: 552 VKEACKLADGIVDRGREIPGKVRTVLINALRKAGNADLAIKLMHSKIGIGYDRMRSVKKR 611
Query: 723 VKFRTLVES 749
VKF+TL +S
Sbjct: 612 VKFQTLFDS 620
Score = 99.4 bits (246), Expect = 2e-18
Identities = 65/203 (32%), Positives = 103/203 (50%), Gaps = 1/203 (0%)
Frame = +3
Query: 87 YSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEALAVFKKME 266
YS I GL K G++ E +FE MV+KGC Y +ID AK+G +D AL+ ++M+
Sbjct: 295 YSLTICGLCKQGKVVEGCSVFESMVKKGCVAHKAVYTAIIDGYAKSGNMDVALSFLERMK 354
Query: 267 DEGCDQTVYTFTILINGLFKEHRNEEALKLWDLMIDKGITPTAASCRALATGLCLSGKVA 446
+G + T+ ++ GL K + EEA+ + G+ A +L GL G+V
Sbjct: 355 VDGVEPDEVTYGAVVGGLCKSGKVEEAMDYYRFCKGNGVAVNAVFYSSLIDGLGKVGRVD 414
Query: 447 RACKILDELAPMGIVLET-AFEDMMNVLCKAGRIAEACKLADGVIDRGREIPGRVRTIMI 623
A ++ +E+A G ++ + +M+ LCK+GR+ EA L + G E TI+I
Sbjct: 415 EAERLFEEMAEEGCPPDSYCYNALMDGLCKSGRVDEALMLFRRMEQEGCEHTVYTFTILI 474
Query: 624 NSLRKAGNADLAMKLMHSKIGIG 692
+ L K + A+KL I G
Sbjct: 475 SELFKERRNEEALKLWEEMIDKG 497
Score = 69.3 bits (168), Expect = 2e-09
Identities = 53/225 (23%), Positives = 95/225 (42%), Gaps = 5/225 (2%)
Frame = +3
Query: 3 LCKSGRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPR- 179
L +G L + L F NN+ ++ + L++ L A ++ E++F+ M E P+
Sbjct: 158 LAAAGLLHDLLWLFRAMTANNLLPSLHTLNFLLNALVNASLVDSTERVFKSMQESASPKP 217
Query: 180 DSYCYNVLIDALAKNGKVDEALAVFKKMEDEGCDQTVYTFTILINGLFKEHRNEEALKLW 359
D YN L+ K G+ ALA ++ME T+ L+ + E + + L+
Sbjct: 218 DIVSYNTLLKGYCKVGRTRNALATLREMEAGNVPPDEVTYMTLMQACYNEGDMDSCVSLY 277
Query: 360 DLMIDKGITPTAASCRALA---TGLCLSGKVARACKILDELAPMGIVLETA-FEDMMNVL 527
M + + T A + GLC GKV C + + + G V A + +++
Sbjct: 278 HEMEEDEVLVTKIPSHAYSLTICGLCKQGKVVEGCSVFESMVKKGCVAHKAVYTAIIDGY 337
Query: 528 CKAGRIAEACKLADGVIDRGREIPGRVRTIMINSLRKAGNADLAM 662
K+G + A + + G E ++ L K+G + AM
Sbjct: 338 AKSGNMDVALSFLERMKVDGVEPDEVTYGAVVGGLCKSGKVEEAM 382
>ref|XP_004513160.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Cicer arietinum]
Length = 649
Score = 392 bits (1007), Expect = e-106
Identities = 184/249 (73%), Positives = 221/249 (88%)
Frame = +3
Query: 3 LCKSGRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRD 182
LCKSGR+EEAL +F++C N + +N V YSSLIDGLGKAGR++EAEK+F+EM KGCP D
Sbjct: 401 LCKSGRVEEALCYFQFCNENGIVVNAVFYSSLIDGLGKAGRVDEAEKVFDEMSVKGCPPD 460
Query: 183 SYCYNVLIDALAKNGKVDEALAVFKKMEDEGCDQTVYTFTILINGLFKEHRNEEALKLWD 362
SYCYN LID L K G++D+ALA+FK+ME +GC+QTVYTFTI I+ LF+E RNEEA+K+WD
Sbjct: 461 SYCYNALIDGLCKCGRIDDALALFKRMECDGCEQTVYTFTIFISELFRERRNEEAMKMWD 520
Query: 363 LMIDKGITPTAASCRALATGLCLSGKVARACKILDELAPMGIVLETAFEDMMNVLCKAGR 542
LMIDKGITP A RAL+ GLCLSGKVARACK+LDELAPMG+VLE A+EDM+ LCKAGR
Sbjct: 521 LMIDKGITPNVACFRALSIGLCLSGKVARACKVLDELAPMGVVLEMAYEDMIGALCKAGR 580
Query: 543 IAEACKLADGVIDRGREIPGRVRTIMINSLRKAGNADLAMKLMHSKIGIGYHRMRSVKKR 722
+ EACKLADG++DRGREIPG+VRT+MI+SLRKAGNADLA+KLMHSKIGIGY RMRSVKKR
Sbjct: 581 VKEACKLADGIVDRGREIPGKVRTVMIHSLRKAGNADLAIKLMHSKIGIGYERMRSVKKR 640
Query: 723 VKFRTLVES 749
VKF+TL+++
Sbjct: 641 VKFQTLLDN 649
Score = 101 bits (251), Expect = 5e-19
Identities = 68/203 (33%), Positives = 103/203 (50%), Gaps = 1/203 (0%)
Frame = +3
Query: 87 YSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYCYNVLIDALAKNGKVDEALAVFKKME 266
YS +I GL K G++ EA LFE M+ GC + Y LID K+G D AL + ++M+
Sbjct: 324 YSLVICGLCKMGKVLEAYALFENMIRNGCKGNKAVYTALIDCYGKSGNSDGALRLLERMK 383
Query: 267 DEGCDQTVYTFTILINGLFKEHRNEEALKLWDLMIDKGITPTAASCRALATGLCLSGKVA 446
+G + T+ ++NGL K R EEAL + + GI A +L GL +G+V
Sbjct: 384 MDGIESDEVTYGAIVNGLCKSGRVEEALCYFQFCNENGIVVNAVFYSSLIDGLGKAGRVD 443
Query: 447 RACKILDELAPMGIVLET-AFEDMMNVLCKAGRIAEACKLADGVIDRGREIPGRVRTIMI 623
A K+ DE++ G ++ + +++ LCK GRI +A L + G E TI I
Sbjct: 444 EAEKVFDEMSVKGCPPDSYCYNALIDGLCKCGRIDDALALFKRMECDGCEQTVYTFTIFI 503
Query: 624 NSLRKAGNADLAMKLMHSKIGIG 692
+ L + + AMK+ I G
Sbjct: 504 SELFRERRNEEAMKMWDLMIDKG 526
Score = 93.6 bits (231), Expect = 1e-16
Identities = 68/222 (30%), Positives = 107/222 (48%), Gaps = 1/222 (0%)
Frame = +3
Query: 6 CKSGRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDS 185
CK G+ +A++ + N+ +VV Y +++ G + L+ EM +KG S
Sbjct: 262 CKVGKTRKAIEMVREMEVINLEPDVVTYLTIMQACYVEGDFDCCLSLYHEMEDKGLEVPS 321
Query: 186 YCYNVLIDALAKNGKVDEALAVFKKMEDEGCDQTVYTFTILINGLFKEHRNEEALKLWDL 365
+ Y+++I L K GKV EA A+F+ M GC +T LI+ K ++ AL+L +
Sbjct: 322 HGYSLVICGLCKMGKVLEAYALFENMIRNGCKGNKAVYTALIDCYGKSGNSDGALRLLER 381
Query: 366 MIDKGITPTAASCRALATGLCLSGKVARACKILDELAPMGIVLETAF-EDMMNVLCKAGR 542
M GI + A+ GLC SG+V A GIV+ F +++ L KAGR
Sbjct: 382 MKMDGIESDEVTYGAIVNGLCKSGRVEEALCYFQFCNENGIVVNAVFYSSLIDGLGKAGR 441
Query: 543 IAEACKLADGVIDRGREIPGRVRTIMINSLRKAGNADLAMKL 668
+ EA K+ D + +G +I+ L K G D A+ L
Sbjct: 442 VDEAEKVFDEMSVKGCPPDSYCYNALIDGLCKCGRIDDALAL 483
Score = 78.6 bits (192), Expect = 3e-12
Identities = 66/255 (25%), Positives = 108/255 (42%), Gaps = 36/255 (14%)
Frame = +3
Query: 12 SGRLEEALQWFEYCKRNNVAMNVVLYSSLIDGLGKAGRLEEAEKLFEEMVEKGCPRDSYC 191
+G +EE L + N+ + Y+SL++GL + +E AE++F+ M E D
Sbjct: 194 AGLVEELLSVWRGMNEQNIQPTLFTYNSLLNGLVGSSLVESAERVFDAMKEGRTKPDVVT 253
Query: 192 YNVLIDALAKNGKVDEALAVFKKMEDEGCDQTVYTFTILINGLFKEHRNEEALKLWDLMI 371
YN LI K GK +A+ + ++ME + V T+ ++ + E + L L+ M
Sbjct: 254 YNTLIKGYCKVGKTRKAIEMVREMEVINLEPDVVTYLTIMQACYVEGDFDCCLSLYHEME 313
Query: 372 DKGITPTAASCRALATGLCLSGKVARA-----------CK-------------------- 458
DKG+ + + GLC GKV A CK
Sbjct: 314 DKGLEVPSHGYSLVICGLCKMGKVLEAYALFENMIRNGCKGNKAVYTALIDCYGKSGNSD 373
Query: 459 ----ILDELAPMGIVL-ETAFEDMMNVLCKAGRIAEACKLADGVIDRGREIPGRVRTIMI 623
+L+ + GI E + ++N LCK+GR+ EA + G + + +I
Sbjct: 374 GALRLLERMKMDGIESDEVTYGAIVNGLCKSGRVEEALCYFQFCNENGIVVNAVFYSSLI 433
Query: 624 NSLRKAGNADLAMKL 668
+ L KAG D A K+
Sbjct: 434 DGLGKAGRVDEAEKV 448
Score = 68.9 bits (167), Expect = 3e-09
Identities = 61/256 (23%), Positives = 111/256 (43%), Gaps = 42/256 (16%)
Frame = +3
Query: 30 ALQWFEYCK-RNNVAMNVVLYSSLIDGLGKAGRLEE-----AEKLFEEMVEKGCPRDSYC 191
AL++F + +NN + ++ Y SLI+ L A +F E+ P
Sbjct: 124 ALRFFNWASNQNNYSHSLDCYVSLINLLLSPSATTTTTTAAALNIFAELRHNRLPLTPPA 183
Query: 192 YNVLIDALAKNGKVDEALAVFKKMEDEGCDQTVYTFTILINGLFKEHRNEEALKLWDLMI 371
N LI + G V+E L+V++ M ++ T++T+ L+NGL E A +++D M
Sbjct: 184 ANSLIKSFGNAGLVEELLSVWRGMNEQNIQPTLFTYNSLLNGLVGSSLVESAERVFDAMK 243
Query: 372 DKGITPTAASCRALATGLCLSGKVARACKILDELAPMGI--------------VLETAFE 509
+ P + L G C GK +A +++ E+ + + +E F+
Sbjct: 244 EGRTKPDVVTYNTLIKGYCKVGKTRKAIEMVREMEVINLEPDVVTYLTIMQACYVEGDFD 303
Query: 510 DMMNV----------------------LCKAGRIAEACKLADGVIDRGREIPGRVRTIMI 623
+++ LCK G++ EA L + +I G + V T +I
Sbjct: 304 CCLSLYHEMEDKGLEVPSHGYSLVICGLCKMGKVLEAYALFENMIRNGCKGNKAVYTALI 363
Query: 624 NSLRKAGNADLAMKLM 671
+ K+GN+D A++L+
Sbjct: 364 DCYGKSGNSDGALRLL 379