BLASTX nr result

ID: Rehmannia22_contig00034732 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00034732
         (371 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234617.1| starch synthase IV [Solanum lycopersicum] gi...    88   1e-15
ref|XP_002274716.1| PREDICTED: uncharacterized protein LOC100257...    71   2e-10
gb|EOY27767.1| Starch synthase 4 isoform 2 [Theobroma cacao]           69   6e-10
gb|EOY27766.1| Starch synthase 4 isoform 1 [Theobroma cacao] gi|...    69   6e-10

>ref|NP_001234617.1| starch synthase IV [Solanum lycopersicum]
           gi|247643234|gb|ACT09058.1| starch synthase IV precursor
           [Solanum lycopersicum]
          Length = 1001

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 49/101 (48%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
 Frame = +2

Query: 14  VIVRLYPLPAQRLRPASCRMRQR-NFSVQNKKHQAKKINLERPTNTNSQQNGDSDSDPSN 190
           V VR YPLP+QRL PAS +MRQR NFS+QNKK Q K IN+ERP + + Q + D DSD   
Sbjct: 24  VNVRFYPLPSQRLPPASGKMRQRRNFSLQNKKKQTKTINIERPPDVDLQLSDDIDSDTEK 83

Query: 191 LSKDSIIDSNQEMASNDSVPIILEGGYSKEKGYNDSSPQNE 313
           +SK S+ +SNQE+   ++V    E   S E  Y+      E
Sbjct: 84  MSKQSLSNSNQEVPIEENVDTSTETKSSDESTYSSVDSNEE 124


>ref|XP_002274716.1| PREDICTED: uncharacterized protein LOC100257130 [Vitis vinifera]
           gi|297740652|emb|CBI30834.3| unnamed protein product
           [Vitis vinifera]
          Length = 1011

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 33/69 (47%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
 Frame = +2

Query: 38  PAQRLRPASCRMRQRNFSVQNKKHQAKKINLE-RPTNTNSQQNGDSDSDPSNLSKDSIID 214
           P+ RL PASC+MR RNFS Q+K+ Q KK++ + RPTN++ Q NGD D++P N   D +  
Sbjct: 29  PSHRLLPASCKMRHRNFSSQHKRQQTKKVSPDRRPTNSHFQSNGDEDTEPENALADGVSS 88

Query: 215 SNQEMASND 241
            NQ    +D
Sbjct: 89  LNQGTTPDD 97


>gb|EOY27767.1| Starch synthase 4 isoform 2 [Theobroma cacao]
          Length = 1017

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 42/124 (33%), Positives = 67/124 (54%), Gaps = 4/124 (3%)
 Frame = +2

Query: 11  HVIVRLYPLPAQRLRPASCRMRQRNFSVQNKKHQAKKINLER-PTNTNSQQNGDSDSDPS 187
           HV +RL  +P++RL PASC+MRQ+NFS QNK+ Q KK+  E+ PT+   Q N D +S+P 
Sbjct: 33  HVNLRLLFVPSRRLLPASCKMRQKNFSSQNKRPQGKKLPSEQIPTSAKLQPNSDEESEPE 92

Query: 188 NLSKDSIIDSN---QEMASNDSVPIILEGGYSKEKGYNDSSPQNEVRIDTVDSAGESSHS 358
           N   +S+   +    E    D V   ++  Y  E+     S      +  +++  +  H+
Sbjct: 93  NSVPNSVDMEHIVQNETLYEDDVNTRVDVEYINEQNLGTLS------VSAIETNRDVEHT 146

Query: 359 DDEN 370
           D +N
Sbjct: 147 DGQN 150


>gb|EOY27766.1| Starch synthase 4 isoform 1 [Theobroma cacao]
           gi|508780512|gb|EOY27768.1| Starch synthase 4 isoform 1
           [Theobroma cacao] gi|508780513|gb|EOY27769.1| Starch
           synthase 4 isoform 1 [Theobroma cacao]
          Length = 1056

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 42/124 (33%), Positives = 67/124 (54%), Gaps = 4/124 (3%)
 Frame = +2

Query: 11  HVIVRLYPLPAQRLRPASCRMRQRNFSVQNKKHQAKKINLER-PTNTNSQQNGDSDSDPS 187
           HV +RL  +P++RL PASC+MRQ+NFS QNK+ Q KK+  E+ PT+   Q N D +S+P 
Sbjct: 33  HVNLRLLFVPSRRLLPASCKMRQKNFSSQNKRPQGKKLPSEQIPTSAKLQPNSDEESEPE 92

Query: 188 NLSKDSIIDSN---QEMASNDSVPIILEGGYSKEKGYNDSSPQNEVRIDTVDSAGESSHS 358
           N   +S+   +    E    D V   ++  Y  E+     S      +  +++  +  H+
Sbjct: 93  NSVPNSVDMEHIVQNETLYEDDVNTRVDVEYINEQNLGTLS------VSAIETNRDVEHT 146

Query: 359 DDEN 370
           D +N
Sbjct: 147 DGQN 150


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