BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00034421
         (939 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...   113   1e-22
ref|XP_004298091.1| PREDICTED: uncharacterized protein LOC101303...   103   7e-20
gb|EOY00433.1| Uncharacterized protein TCM_010295 [Theobroma cacao]   101   5e-19
ref|NP_187562.1| RNase H domain-containing protein [Arabidopsis ...   100   1e-18
gb|AAD20714.1| putative non-LTR retroelement reverse transcripta...   100   1e-18
emb|CAB75484.1| putative protein [Arabidopsis thaliana]               100   1e-18
gb|AAD24831.1| putative non-LTR retroelement reverse transcripta...    98   4e-18
gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam...    97   7e-18
gb|EMJ08972.1| hypothetical protein PRUPE_ppa026368mg, partial [...    96   2e-17
gb|AAF18538.1|AC006551_24 Very similar to retrotransposon revers...    96   3e-17
ref|XP_004292002.1| PREDICTED: uncharacterized protein LOC101312...    95   3e-17
gb|EMJ05203.1| hypothetical protein PRUPE_ppa025711mg, partial [...    95   3e-17
ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626...    95   4e-17
ref|XP_006483194.1| PREDICTED: putative ribonuclease H protein A...    95   4e-17
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...    94   6e-17
ref|XP_006285450.1| hypothetical protein CARUB_v10006875mg, part...    94   1e-16
ref|XP_002444973.1| hypothetical protein SORBIDRAFT_07g002160 [S...    94   1e-16
gb|EMS63991.1| Cycloartenol synthase [Triticum urartu]                 93   1e-16
gb|EMJ20613.1| hypothetical protein PRUPE_ppa021915mg, partial [...    93   1e-16
ref|NP_194638.1| ribonuclease H-like protein [Arabidopsis thalia...    93   1e-16

>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score =  113 bits (282), Expect = 1e-22
 Identities = 66/188 (35%), Positives = 95/188 (50%), Gaps = 2/188 (1%)
 Frame = +3

Query: 3    WIWNWDKKGQFSVKSAYNQLLQIHHLEKDWPESSTQADCNNRMWEKCWKLQIKNKLKHFL 182
            W+W   K GQF+V+SAY   L    LE      ST    N ++W+K WK +I  K+K F 
Sbjct: 1012 WMWMMSKNGQFTVRSAYYHEL----LEDRKTGPSTSRGPNLKLWQKIWKAKIPPKVKLFS 1067

Query: 183  WKVLNKCVPTAWLLNKRGMDIDPRCPMCGEEVETVEHLFFQCERAQITWKTAPL--HWYN 356
            WK ++  +     + KRGM+ID  CP CGE+ ET EHL + C+ +   W  +PL  H  N
Sbjct: 1068 WKAIHNGLAVYTNMRKRGMNIDGACPRCGEKEETTEHLIWGCDESSRAWYISPLRIHTGN 1127

Query: 357  TLSTDFCIKNWWHQVCAVKNDSFAHDRMELSVYLLWWLWKTRNIWVFHKDRWECRDIVKA 536
              +  F I  W   +     D+   +   L   + W +W  RN WVF K +   +++V+ 
Sbjct: 1128 IEAGSFRI--WVESLLDTHKDT---EWWALFWMICWNIWLGRNKWVFEKKKLAFQEVVER 1182

Query: 537  AVHEWQEF 560
            AV    EF
Sbjct: 1183 AVRGVMEF 1190


>ref|XP_004298091.1| PREDICTED: uncharacterized protein LOC101303799 [Fragaria vesca
           subsp. vesca]
          Length = 351

 Score =  103 bits (258), Expect = 7e-20
 Identities = 53/199 (26%), Positives = 102/199 (51%), Gaps = 1/199 (0%)
 Frame = +3

Query: 3   WIWNWDKKGQFSVKSAYNQLLQIHHLEKDWPESSTQADCNNRMWEKCWKLQIKNKLKHFL 182
           W+W++D+KG +SV+S Y+   ++ H+E     SS+Q      +W+K WK+ +  K++   
Sbjct: 51  WMWHFDRKGLYSVRSGYHVARKVEHMETIASSSSSQGGWGF-IWKKVWKVNVPPKVRMHA 109

Query: 183 WKVLNKCVPTAWLLNKRGMDIDPRCPMCGEEVETVEHLFFQCERAQITWKTAPLHWYNTL 362
           W++L + +PT W+L K+G+D+   CP CG + E   H+F  C      WK + L    + 
Sbjct: 110 WRILKEVLPTKWVLKKKGVDLGVECPFCGGDKEDGLHIFKNCGVVNQLWKCSSLTSTPST 169

Query: 363 STDFCIKNWWHQVCAVKNDSFAHDRMELSVYLLWWLWKTRNIWVFHKDRWECRDIVKAAV 542
                IK W   +  + +      ++E+ +Y LW +W  +N  V+    +   ++     
Sbjct: 170 HPAMEIKAWLCDMVELMHVK----KLEVFLYTLWAIWVEQNNIVWRGGCFVPVNVAGWVN 225

Query: 543 HEWQEFLQIHVNS-CKDGR 596
           ++  E+++ H  + C  G+
Sbjct: 226 NQVDEYIKYHCRTDCTTGK 244


>gb|EOY00433.1| Uncharacterized protein TCM_010295 [Theobroma cacao]
          Length = 290

 Score =  101 bits (251), Expect = 5e-19
 Identities = 61/199 (30%), Positives = 99/199 (49%), Gaps = 3/199 (1%)
 Frame = +3

Query: 6   IWNWDKKGQFSVKSAYNQLLQIHHLEKDWPESSTQADCNNRMWEKCWKLQIKNKLKHFLW 185
           +W   K G ++VKS Y  L        D   +++ +   N +W+K W   +  K   F+W
Sbjct: 24  VWFDTKNGSYTVKSGYKFLGST----LDNVTNTSSSVQGNWLWKKLWHCAVPRKTMLFMW 79

Query: 186 KVLNKCVPTAWLLNKRGMDIDPRCPMCGEEVETVEHLFFQCERAQITWKTAPLHWYNTLS 365
           KV++  +PT   L KRG++I+  CP+C  EVET  H    C+ +++ W T    + +  +
Sbjct: 80  KVIHDILPTRSELIKRGVNIELMCPLCEIEVETAFHCLCNCQFSRLVWLTTKCGFRDISN 139

Query: 366 TDFCIKNWWHQVCAVKNDSFAHDRMELSVYLLWWLWKTRNIWVFHKDRWECRDIVKAA-- 539
               I +W   V  V N     D  E  + LLW +WKTRN+ VF++ R     +V+    
Sbjct: 140 FHDSIIDWLQGVFEVLN----KDETEEFICLLWAIWKTRNVVVFNQSRSTPMVVVEIGLD 195

Query: 540 -VHEWQEFLQIHVNSCKDG 593
            +H+++   + H NS  DG
Sbjct: 196 LIHQFRRASRAHGNSKDDG 214


>ref|NP_187562.1| RNase H domain-containing protein [Arabidopsis thaliana]
           gi|6682231|gb|AAF23283.1|AC016661_8 putative non-LTR
           reverse transcriptase [Arabidopsis thaliana]
           gi|332641254|gb|AEE74775.1| RNase H domain-containing
           protein [Arabidopsis thaliana]
          Length = 484

 Score = 99.8 bits (247), Expect = 1e-18
 Identities = 66/197 (33%), Positives = 97/197 (49%), Gaps = 8/197 (4%)
 Frame = +3

Query: 6   IWNWDKKGQFSVKSAYNQLLQIHHLEKDWPESST---QADCNNRMWEKCWKLQIKNKLKH 176
           IWN++  G+++V+S Y   L  H    + P  +      D   R+W     L I  KLKH
Sbjct: 120 IWNYNTTGEYTVRSGY--WLLTHDPSTNIPAINPPHGSIDLKTRIWN----LPIMPKLKH 173

Query: 177 FLWKVLNKCVPTAWLLNKRGMDIDPRCPMCGEEVETVEHLFFQCERAQITWK--TAPLHW 350
           FLW+ L++ + T   L  RGM IDP CP C  E E++ H  F C  A + W+   + L  
Sbjct: 174 FLWRALSQALATTERLTTRGMRIDPSCPRCHRENESINHALFTCPFATMAWRLSDSSLIR 233

Query: 351 YNTLSTDFCIKNWWHQVCAVKNDSFAHDRMELSVYLLWWLWKTRNIWVFHKDRWECRDIV 530
              +S DF  +N  + +  V++ + +     L V+L+W +WK RN  VF+K R      V
Sbjct: 234 NQLMSNDF-EENISNILNFVQDTTMSDFHKLLPVWLIWRIWKARNNVVFNKFRESPSKTV 292

Query: 531 ---KAAVHEWQEFLQIH 572
              KA  H+W    Q H
Sbjct: 293 LSAKAETHDWLNATQSH 309


>gb|AAD20714.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1750

 Score = 99.8 bits (247), Expect = 1e-18
 Identities = 66/197 (33%), Positives = 97/197 (49%), Gaps = 8/197 (4%)
 Frame = +3

Query: 6    IWNWDKKGQFSVKSAYNQLLQIHHLEKDWPESST---QADCNNRMWEKCWKLQIKNKLKH 176
            IWN++  G+++V+S Y   L  H    + P  +      D   R+W     L I  KLKH
Sbjct: 1386 IWNYNTTGEYTVRSGY--WLLTHDPSTNIPAINPPHGSIDLKTRIWN----LPIMPKLKH 1439

Query: 177  FLWKVLNKCVPTAWLLNKRGMDIDPRCPMCGEEVETVEHLFFQCERAQITWK--TAPLHW 350
            FLW+ L++ + T   L  RGM IDP CP C  E E++ H  F C  A + W+   + L  
Sbjct: 1440 FLWRALSQALATTERLTTRGMRIDPSCPRCHRENESINHALFTCPFATMAWRLSDSSLIR 1499

Query: 351  YNTLSTDFCIKNWWHQVCAVKNDSFAHDRMELSVYLLWWLWKTRNIWVFHKDRWECRDIV 530
               +S DF  +N  + +  V++ + +     L V+L+W +WK RN  VF+K R      V
Sbjct: 1500 NQLMSNDF-EENISNILNFVQDTTMSDFHKLLPVWLIWRIWKARNNVVFNKFRESPSKTV 1558

Query: 531  ---KAAVHEWQEFLQIH 572
               KA  H+W    Q H
Sbjct: 1559 LSAKAETHDWLNATQSH 1575


>emb|CAB75484.1| putative protein [Arabidopsis thaliana]
          Length = 851

 Score = 99.8 bits (247), Expect = 1e-18
 Identities = 63/188 (33%), Positives = 96/188 (51%), Gaps = 6/188 (3%)
 Frame = +3

Query: 6    IWNWDKKGQFSVKSAYNQLLQIHHLEKDWPESSTQADCNNRMWEKCWKLQIKNKLKHFLW 185
            IW+++  G ++V+S Y   L  H      P +  +   +  +  K W L I  KLKHFLW
Sbjct: 625  IWSYNSTGDYTVRSGY--WLSTHDPSNTIP-TMAKPHGSVDLKTKIWNLPIMPKLKHFLW 681

Query: 186  KVLNKCVPTAWLLNKRGMDIDPRCPMCGEEVETVEHLFFQCERAQITWKTA--PLHWYNT 359
            ++L+K +PT   L  RGM IDP CP C  E E++ H  F C  A + W+ +  PL+  + 
Sbjct: 682  RILSKALPTTDRLTTRGMRIDPGCPRCRRENESINHALFTCPFATMAWRLSDTPLYRSSI 741

Query: 360  LSTDFCIKNWWHQVCAVKNDSFAHDRMELSVYLLWWLWKTRNIWVFHKDRWECRDI---- 527
            LS +    N  + +  ++N +    +  +  +LLW +WK RN  VF+  R E   I    
Sbjct: 742  LSNNI-EDNISNILLLLQNTTITDSQKLIPFWLLWRIWKARNNVVFNNLR-ESPSITVVR 799

Query: 528  VKAAVHEW 551
             KA  +EW
Sbjct: 800  AKAETNEW 807


>gb|AAD24831.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1524

 Score = 98.2 bits (243), Expect = 4e-18
 Identities = 66/197 (33%), Positives = 96/197 (48%), Gaps = 8/197 (4%)
 Frame = +3

Query: 6    IWNWDKKGQFSVKSAYNQLLQIHHLEKDWPESST---QADCNNRMWEKCWKLQIKNKLKH 176
            IWN++  G+++V+S Y   L  H    + P  +      D   R+W     L I  KLKH
Sbjct: 1160 IWNYNTTGEYTVRSGY--WLLTHDPSTNIPAINPPHGSIDLKTRIWN----LPIMPKLKH 1213

Query: 177  FLWKVLNKCVPTAWLLNKRGMDIDPRCPMCGEEVETVEHLFFQCERAQITW--KTAPLHW 350
            FLW+ L++ + T   L  RGM IDP CP C  E E++ H  F C  A + W    + L  
Sbjct: 1214 FLWRALSQALATTERLTTRGMRIDPICPRCHRENESINHALFTCPFATMAWWLSDSSLIR 1273

Query: 351  YNTLSTDFCIKNWWHQVCAVKNDSFAHDRMELSVYLLWWLWKTRNIWVFHKDRWECRDIV 530
               +S DF  +N  + +  V++ + +     L V+L+W +WK RN  VF+K R      V
Sbjct: 1274 NQLMSNDF-EENISNILNFVQDTTMSDFHKLLPVWLIWRIWKARNNVVFNKFRESPSKTV 1332

Query: 531  ---KAAVHEWQEFLQIH 572
               KA  H+W    Q H
Sbjct: 1333 LSAKAETHDWLNATQSH 1349


>gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam: rvt.hmm, score:
            42.57) [Arabidopsis thaliana]
          Length = 1662

 Score = 97.4 bits (241), Expect = 7e-18
 Identities = 57/155 (36%), Positives = 80/155 (51%), Gaps = 2/155 (1%)
 Frame = +3

Query: 144  WKLQIKNKLKHFLWKVLNKCVPTAWLLNKRGMDIDPRCPMCGEEVETVEHLFFQCERAQI 323
            WKL I  K+K+ LW+ ++K +PT   L  RGMDIDP CP C  E ET+ H+ F C  A  
Sbjct: 1363 WKLPIIPKIKYMLWRTISKALPTRSRLLTRGMDIDPHCPRCPTEEETINHVLFTCPYAAS 1422

Query: 324  TWKTAPLHWY--NTLSTDFCIKNWWHQVCAVKNDSFAHDRMELSVYLLWWLWKTRNIWVF 497
             W  +   W   +T S D   +N    + +  N++   ++     +L+W LWK RN  VF
Sbjct: 1423 IWGLSNFPWLPGHTFSQD-TEENISFLINSFSNNTLNTEQRLAPFWLIWRLWKARNNLVF 1481

Query: 498  HKDRWECRDIVKAAVHEWQEFLQIHVNSCKDGRVL 602
            +K    C  +V     E  E+LQ  VN  +D  VL
Sbjct: 1482 NKFSESCSRVVTQTEAEVNEWLQ-SVNRREDASVL 1515


>gb|EMJ08972.1| hypothetical protein PRUPE_ppa026368mg, partial [Prunus persica]
          Length = 1060

 Score = 95.9 bits (237), Expect = 2e-17
 Identities = 55/168 (32%), Positives = 84/168 (50%), Gaps = 4/168 (2%)
 Frame = +3

Query: 6    IWNWDKKGQFSVKSAYNQLLQIHHLEKDWP--ESSTQADCNNRMWEKCWKLQIKNKLKHF 179
            IW++++ G +SVKS Y    ++  LEKD    E S + D N++ W+K W L+I NK+K F
Sbjct: 705  IWHYERNGMYSVKSGY----RLAGLEKDKMSGEPSARVDLNSKFWKKIWALKIPNKIKFF 760

Query: 180  LWKVLNKCVPTAWLLNKRGMDIDPRCPMCGEEVETVEHLFFQCERAQITWKTAPLHWYNT 359
            LW+     +P   +L  R +   P CP C  + E+V H  + CE A+  W+ +   W N 
Sbjct: 761  LWRCAWDFLPCGQILFNRKIAPTPICPKCHRKAESVLHAVWLCEAAKEVWRNSA--WGNV 818

Query: 360  LST--DFCIKNWWHQVCAVKNDSFAHDRMELSVYLLWWLWKTRNIWVF 497
                     +  WH +      S + +   L  YL W LW  RN ++F
Sbjct: 819  CEVWRVNSFRELWHAL----QLSSSGEEQGLFAYLCWGLWNRRNSFIF 862


>gb|AAF18538.1|AC006551_24 Very similar to retrotransposon reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1231

 Score = 95.5 bits (236), Expect = 3e-17
 Identities = 57/187 (30%), Positives = 92/187 (49%), Gaps = 4/187 (2%)
 Frame = +3

Query: 3    WIWNWDKKGQFSVKSAYNQLLQIHHLEKDWPESSTQADCNNRMWEKCWKLQIKNKLKHFL 182
            WIW  +K G +SVK  Y  L    +L +   E+  Q   N+ +  + WKLQ + K+K FL
Sbjct: 850  WIWKHNKSGDYSVKLGY-WLASNQNLGQVAIEAMMQPSLND-LKTQVWKLQTEPKIKVFL 907

Query: 183  WKVLNKCVPTAWLLNKRGMDIDPRCPMCGEEVETVEHLFFQCERAQITWKTAPLHW-YNT 359
            WKVL+  +P   LL+ RGM +D RC  CG E E+++H+ F C   +  W  + +H     
Sbjct: 908  WKVLSGAIPVVDLLSYRGMKLDSRCQTCGCEGESIQHVLFSCSFPRQVWAMSNIHVPLLG 967

Query: 360  LSTDFCIKNWWHQVCAVKNDSFAHDRMELSVYLLWWLWKTRNIWVFHKDRWECRDI---V 530
                    N +H +    N  +  +      +++W +WK RN++ F   R+   +    V
Sbjct: 968  FECGSVYANLYHFLINRDNLKWPVELRRSFPWIIWRIWKNRNLFFFEGKRFTVLETILKV 1027

Query: 531  KAAVHEW 551
            +  V +W
Sbjct: 1028 RKDVEDW 1034


>ref|XP_004292002.1| PREDICTED: uncharacterized protein LOC101312896 [Fragaria vesca
            subsp. vesca]
          Length = 2277

 Score = 95.1 bits (235), Expect = 3e-17
 Identities = 73/276 (26%), Positives = 130/276 (47%), Gaps = 3/276 (1%)
 Frame = +3

Query: 3    WIWNWDKKGQFSVKSAYNQLLQIHHLEKDWPESSTQADCNNRMWEKCWKLQIKNKLKHFL 182
            WIW  D+KG F VKSAY+ + +   LE      +  A    ++W K W   +  K+K  +
Sbjct: 1076 WIWAPDRKGLFMVKSAYH-IARTRVLEDHVMALNPSA----QLWNKIWNAPVPGKVKICV 1130

Query: 183  WKVLNKCVPTAWLLNKRGMDIDPRCPMCGEEVETVEHLFFQCERAQ--ITWKTAPLHWYN 356
            WKV +  +P+   L++RG+DID +CP C EEVE+  H    C  A   I     P+   +
Sbjct: 1131 WKVASNILPSRSRLSQRGIDIDTQCPFCDEEVESPIHALRDCPHAAAFIQLVDVPIQLAD 1190

Query: 357  TLSTDFCIKNWWHQVCAVKNDSFAHDRMELSVYLLWWLWKTRNIWVFHKDRWECRDIVKA 536
            T + D+        V +++N       +   + ++W +W+ +N  V++ +  +  ++V  
Sbjct: 1191 TNALDWL-------VSSLENSPSTFATL---MMIIWSVWRNQNDHVWNNNAKQATEVVPL 1240

Query: 537  AVHEWQEFLQIHVNSCKDGRVLKPPYSLLI-NSGTNSTLVGHHYMVISAVSCLGKGTAFG 713
             +  W+EF    V   + GR + P    +  +SG     V   Y   S ++ L  G  F 
Sbjct: 1241 TLRWWEEFKSAFVK--RRGRNVSPRDRWITPSSGYIKLNVDAAYNNASCMASL--GGVFR 1296

Query: 714  GCSFDDLGNIDRAMVTSREIIQSPVEAILTGIRLAM 821
              +   LG   + + ++     S + A+L G+++A+
Sbjct: 1297 DHTGSCLGVFMQGLFSAHSAHHSELMALLVGVQVAI 1332


>gb|EMJ05203.1| hypothetical protein PRUPE_ppa025711mg, partial [Prunus persica]
          Length = 534

 Score = 95.1 bits (235), Expect = 3e-17
 Identities = 55/163 (33%), Positives = 80/163 (49%), Gaps = 3/163 (1%)
 Frame = +3

Query: 18  DKKGQFSVKSAYNQLLQIHHLEKDWPESSTQADCNNRMWEKCWKLQIKNKLKHFLWKVLN 197
           D + +  VKS YN +   H      P SS   D    +W+  W  Q+  KL +F W+++ 
Sbjct: 248 DLEAKLHVKSGYNMIHMAHLDTPVGPSSSRVLD--KALWKLVWGSQMVPKLMNFWWRMVR 305

Query: 198 KCVPTAWLLNKRGMDIDPRCPMCGEEVETVEHLFFQCERAQITWKTAPLHWYNTLSTDFC 377
            C+PT   L +R +   P CP+CGE  E+VEHLF  C   Q+ W   PL++     +   
Sbjct: 306 GCLPTRDALFRRHLGTSPLCPICGEFPESVEHLFLLCNWVQLVWFGGPLNYKINRQSITS 365

Query: 378 IKNWWHQVCAVKNDSFAHDRMEL---SVYLLWWLWKTRNIWVF 497
           +  W  QV  + + S  +DR  L    VY  W +WK+R   VF
Sbjct: 366 MSEWMMQVLKI-SQSLGYDRKWLISQIVYTCWSIWKSRCSAVF 407


>ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626455 [Citrus sinensis]
          Length = 1452

 Score = 94.7 bits (234), Expect = 4e-17
 Identities = 54/182 (29%), Positives = 90/182 (49%), Gaps = 4/182 (2%)
 Frame = +3

Query: 6    IWNWDKKGQFSVKSAYNQLLQIHHLEKDWPESSTQADCNNRMWEKCWKLQIKNKLKHFLW 185
            +W++DKKG++SVKS Y   L      +++P     ++ ++R+W+  W L +  K+K F+W
Sbjct: 1096 LWHFDKKGEYSVKSGYQLALN-----QNFPNEPESSNSSSRLWKIPWMLDLPEKVKIFMW 1150

Query: 186  KVLNKCVPTAWLLNKRGMDIDPRCPMCGEEVETVEHLFFQCERAQITWKTAPL--HWYNT 359
            + L   +PTA  L KR    +P C  C  +VETV H+  +C+ A+  W  APL       
Sbjct: 1151 RALKNILPTAENLWKRRSLQEPICQRCKLQVETVSHVLIECKAARKIWDLAPLIVQPSKD 1210

Query: 360  LSTDF--CIKNWWHQVCAVKNDSFAHDRMELSVYLLWWLWKTRNIWVFHKDRWECRDIVK 533
             + DF   I+  W +    +         EL +   W +W  RN ++F   + + R +  
Sbjct: 1211 HNQDFFSAIQEMWSRSSTAE--------AELMIVYCWVIWSARNKFIFEGKKSDSRFLAA 1262

Query: 534  AA 539
             A
Sbjct: 1263 KA 1264


>ref|XP_006483194.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
           sinensis]
          Length = 765

 Score = 94.7 bits (234), Expect = 4e-17
 Identities = 54/182 (29%), Positives = 90/182 (49%), Gaps = 4/182 (2%)
 Frame = +3

Query: 6   IWNWDKKGQFSVKSAYNQLLQIHHLEKDWPESSTQADCNNRMWEKCWKLQIKNKLKHFLW 185
           +W++DKKG++SVKS Y   L      +++P     ++ ++R+W+  W L +  K+K F+W
Sbjct: 409 LWHFDKKGEYSVKSGYQLALN-----QNFPNEPESSNSSSRLWKIPWMLDLPEKVKIFMW 463

Query: 186 KVLNKCVPTAWLLNKRGMDIDPRCPMCGEEVETVEHLFFQCERAQITWKTAPL--HWYNT 359
           + L   +PTA  L KR    +P C  C  +VETV H+  +C+ A+  W  APL       
Sbjct: 464 RALKNILPTAENLWKRRSLQEPICQRCKLQVETVSHVLIECKAARKIWDLAPLIVQPSKD 523

Query: 360 LSTDF--CIKNWWHQVCAVKNDSFAHDRMELSVYLLWWLWKTRNIWVFHKDRWECRDIVK 533
            + DF   I+  W +    +         EL +   W +W  RN ++F   + + R +  
Sbjct: 524 HNQDFFSAIQEMWSRSSTAE--------AELMIVYCWVIWSARNKFIFEGKKSDSRFLAA 575

Query: 534 AA 539
            A
Sbjct: 576 KA 577


>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1374

 Score = 94.4 bits (233), Expect = 6e-17
 Identities = 54/186 (29%), Positives = 90/186 (48%), Gaps = 6/186 (3%)
 Frame = +3

Query: 9    WNWDKKGQFSVKSAYNQLLQIHHLEKDWPESSTQADCNNRMWEKCWKLQIKNKLKHFLWK 188
            W + + G +SVKS Y  + +I + +++ P+   Q   +  ++++ WKL +  K+ HFLW+
Sbjct: 1012 WEYSRSGHYSVKSGYWVMTEIIN-QRNNPQEVLQPSLDP-IFQQIWKLDVPPKIHHFLWR 1069

Query: 189  VLNKCVPTAWLLNKRGMDIDPRCPMCGEEVETVEHLFFQCERAQITWKTAPL------HW 350
             +N C+  A  L  R +  +  C  C    ETV HL F+C  A++TW  +PL       W
Sbjct: 1070 CVNNCLSVASNLAYRHLAREKSCVRCPSHGETVNHLLFKCPFARLTWAISPLPAPPGGEW 1129

Query: 351  YNTLSTDFCIKNWWHQVCAVKNDSFAHDRMELSVYLLWWLWKTRNIWVFHKDRWECRDIV 530
              +L      +N  H +   K+     D   L  ++LW LWK RN  VF    +    ++
Sbjct: 1130 AESL-----FRNMHHVLSVHKSQPEESDHHALIPWILWRLWKNRNDLVFKGREFTAPQVI 1184

Query: 531  KAAVHE 548
              A  +
Sbjct: 1185 LKATED 1190


>ref|XP_006285450.1| hypothetical protein CARUB_v10006875mg, partial [Capsella rubella]
           gi|482554155|gb|EOA18348.1| hypothetical protein
           CARUB_v10006875mg, partial [Capsella rubella]
          Length = 438

 Score = 93.6 bits (231), Expect = 1e-16
 Identities = 56/190 (29%), Positives = 98/190 (51%), Gaps = 3/190 (1%)
 Frame = +3

Query: 3   WIWNWDKKGQFSVKSAYNQLLQIHHLEKDWPES--STQADCNNRMWEKCWKLQIKNKLKH 176
           ++W++ K G++SVKS Y + L +   E+  P +  +T  D  + +W+    L I  KLKH
Sbjct: 65  YLWSYTKDGEYSVKSGYWKALSLQR-EEHAPVAPLATSPDIASTIWQ----LNIAPKLKH 119

Query: 177 FLWKVLNKCVPTAWLLNKRGMDIDPRCPMCGEEVETVEHLFFQCERAQITWKTAPLHWYN 356
           FLW++ ++ +  A  L +R ++I+P C  C  + E+ EH+FF C R    W+   +    
Sbjct: 120 FLWRLASRAIGVADNLRRRNININPYCSWCCSDFESSEHIFFTCPRVHPIWRMVGVPLTL 179

Query: 357 TLSTDFCIKNWWHQVCAVKNDSFAHDRMELSVYL-LWWLWKTRNIWVFHKDRWECRDIVK 533
               +  +++    +  + NDS        S +L LW LWKTRN  VF++      ++ K
Sbjct: 180 LGDPNISLEDKLRYLFRLHNDSSLPIFKRTSPFLVLWRLWKTRNNLVFNRKSTTTEEVFK 239

Query: 534 AAVHEWQEFL 563
               + +E+L
Sbjct: 240 YICLDTEEWL 249


>ref|XP_002444973.1| hypothetical protein SORBIDRAFT_07g002160 [Sorghum bicolor]
           gi|241941323|gb|EES14468.1| hypothetical protein
           SORBIDRAFT_07g002160 [Sorghum bicolor]
          Length = 469

 Score = 93.6 bits (231), Expect = 1e-16
 Identities = 58/163 (35%), Positives = 77/163 (47%), Gaps = 4/163 (2%)
 Frame = +3

Query: 9   WNWDKKGQFSVKSAYNQLLQIHHLEK----DWPESSTQADCNNRMWEKCWKLQIKNKLKH 176
           W++D KG FSVKSAY+ L  +  L K        +S  + CNN  W K WKL    K+K 
Sbjct: 168 WHYDPKGDFSVKSAYHVLTDMKELSKRRQIGEASASLISPCNNN-WHKIWKLHCPPKVKL 226

Query: 177 FLWKVLNKCVPTAWLLNKRGMDIDPRCPMCGEEVETVEHLFFQCERAQITWKTAPLHWYN 356
           F W+  +  +P    + +RGMDID RCP+C    E   H F +C+  +  W+   L    
Sbjct: 227 FFWRFTHNSLPLRMNILRRGMDIDTRCPVCWRLNEDGGHCFLRCKFVKKCWRALNLEELR 286

Query: 357 TLSTDFCIKNWWHQVCAVKNDSFAHDRMELSVYLLWWLWKTRN 485
               D    N   QV A K  S   D+  L +  LW  W  RN
Sbjct: 287 LTLIDL---NSAKQV-ATKILSLEEDKTLLVIGFLWLWWDARN 325


>gb|EMS63991.1| Cycloartenol synthase [Triticum urartu]
          Length = 809

 Score = 93.2 bits (230), Expect = 1e-16
 Identities = 47/162 (29%), Positives = 80/162 (49%), Gaps = 1/162 (0%)
 Frame = +3

Query: 3    WIWNWDKKGQFSVKSAYNQLLQIHHLEKDWPESSTQADCNNRMWEKCWKLQIKNKLKHFL 182
            W W++D KG FSVKS Y    +   +    PE    + C++  W++ W++    K++HFL
Sbjct: 628  WAWHYDSKGNFSVKSVYIMQCEQQKITNSRPEGEVWS-CSSFRWQRIWRVGCPPKIEHFL 686

Query: 183  WKVLNKCVPTAWLLNKRGMDIDPRCPMCGEEVETVEHLFFQCERAQITWKTAPLHWYN-T 359
            W++    +P  W + + G+D D  CPMCG   +   H F +C+  +  W+   L     T
Sbjct: 687  WRLAYNSLPHGWSIQRHGIDADTLCPMCGRFKKDGAHTFLKCKMVRAVWRQMNLEETRLT 746

Query: 360  LSTDFCIKNWWHQVCAVKNDSFAHDRMELSVYLLWWLWKTRN 485
            L+  F  ++  + V  +  +     R++  V LLW  W  +N
Sbjct: 747  LTKYFDAEDMVNAVLELNEEK----RIQ-CVALLWVWWNVQN 783


>gb|EMJ20613.1| hypothetical protein PRUPE_ppa021915mg, partial [Prunus persica]
          Length = 509

 Score = 93.2 bits (230), Expect = 1e-16
 Identities = 60/197 (30%), Positives = 94/197 (47%), Gaps = 5/197 (2%)
 Frame = +3

Query: 3   WIWNWDKKGQFSVKSAYNQLLQIHHLEKDWPESSTQADCNNRMWEKCWKLQIKNKLKHFL 182
           WIW W   G++SVKS      Q  H+       STQ      +W+  WKL+   K+K F 
Sbjct: 207 WIWPWTSNGEYSVKSGIVGPPQTSHVV------STQ------VWKGLWKLKSLPKIKFFC 254

Query: 183 WKVLNKCVPTAWLLNKRGMDIDPRCPMCGEEVETVEHLFFQCERAQITWKTAPLHW--YN 356
           W++L+  + T   L KR +   P CP+C    E+VEHLF  C      W  +PL++  +N
Sbjct: 255 WRILSNAIATKLNLFKRKISQSPMCPVCENNEESVEHLFLLCPWTAAVWFGSPLNYRVHN 314

Query: 357 TLSTDFCIKNWWHQVCAVKNDSFAHDR---MELSVYLLWWLWKTRNIWVFHKDRWECRDI 527
              T F   NW + +  +   S   DR   M +  ++LW +WK R  +V    +     +
Sbjct: 315 QSITTF--DNWLNSMFQLNLTSIL-DRNRLMTIISFILWEIWKARCKFVIEGRQLHPIHV 371

Query: 528 VKAAVHEWQEFLQIHVN 578
           +  A+    EF++ +V+
Sbjct: 372 LHQAMRAANEFIEANVS 388


>ref|NP_194638.1| ribonuclease H-like protein [Arabidopsis thaliana]
           gi|4972055|emb|CAB43923.1| putative protein [Arabidopsis
           thaliana] gi|7269807|emb|CAB79667.1| putative protein
           [Arabidopsis thaliana] gi|67633766|gb|AAY78807.1|
           putative reverse transcriptase/RNA-dependent DNA
           polymerase [Arabidopsis thaliana]
           gi|332660185|gb|AEE85585.1| ribonuclease H-like protein
           [Arabidopsis thaliana]
          Length = 575

 Score = 93.2 bits (230), Expect = 1e-16
 Identities = 56/197 (28%), Positives = 98/197 (49%), Gaps = 3/197 (1%)
 Frame = +3

Query: 3   WIWNWDKKGQFSVKSAYNQLLQIHHLEKDWPESSTQADCNNRMWEKCWKLQIKNKLKHFL 182
           + W++   G ++VKS Y  L QI + ++  P+  ++   N  +++K WK Q   K++HFL
Sbjct: 213 YTWDYTSSGDYTVKSGYWVLTQIIN-KRSSPQEVSEPSLNP-IYQKIWKSQTSPKIQHFL 270

Query: 183 WKVLNKCVPTAWLLNKRGMDIDPRCPMCGEEVETVEHLFFQCERAQITW--KTAPLHWYN 356
           WK L+  +P A  L  R +  +  C  C    ETV HL F+C  A++TW   + P+    
Sbjct: 271 WKCLSNSLPVAGALAYRHLSKESACIRCPSCKETVNHLLFKCTFARLTWAISSIPIPLGG 330

Query: 357 TLSTDFCIKNWWHQVCAVKNDSFAHDRMELSVYLLWWLWKTRNIWVFHKDRWECRDIVKA 536
             +    +  +W       N  +     +L  +LLW LWK RN  VF    +  +++++ 
Sbjct: 331 EWADSIYVNLYWVFNLGNGNPQW-EKASQLVPWLLWRLWKNRNELVFRGREFNAQEVLRR 389

Query: 537 AVHEWQEF-LQIHVNSC 584
           A  + +E+ ++    SC
Sbjct: 390 AEDDLEEWRIRTEAESC 406