BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00034220
         (1631 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EPS74753.1| hypothetical protein M569_00001, partial [Genlise...   669   0.0  
ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   544   e-152
ref|XP_004245657.1| PREDICTED: DNA-directed RNA polymerase D sub...   541   e-151
emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]   540   e-151
ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV su...   540   e-151
gb|EOY24612.1| DNA-directed RNA polymerase II subunit RPB1-B, pu...   531   e-148
ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D sub...   496   e-137
ref|XP_006590533.1| PREDICTED: DNA-directed RNA polymerase IV su...   489   e-135
ref|XP_002509696.1| DNA-directed RNA polymerase, putative [Ricin...   488   e-135
ref|XP_006440521.1| hypothetical protein CICLE_v10018489mg [Citr...   485   e-134
ref|XP_004298730.1| PREDICTED: DNA-directed RNA polymerase D sub...   484   e-134
ref|XP_004511611.1| PREDICTED: DNA-directed RNA polymerase D sub...   483   e-134
ref|XP_004511607.1| PREDICTED: DNA-directed RNA polymerase D sub...   483   e-134
gb|ESW30448.1| hypothetical protein PHAVU_002G153700g [Phaseolus...   478   e-132
gb|ESW30447.1| hypothetical protein PHAVU_002G153700g [Phaseolus...   478   e-132
ref|XP_006477376.1| PREDICTED: DNA-directed RNA polymerase IV su...   478   e-132
ref|XP_006477375.1| PREDICTED: DNA-directed RNA polymerase IV su...   478   e-132
ref|XP_006573757.1| PREDICTED: DNA-directed RNA polymerase IV su...   474   e-131
ref|XP_006573756.1| PREDICTED: DNA-directed RNA polymerase IV su...   473   e-131
ref|XP_006573755.1| PREDICTED: DNA-directed RNA polymerase IV su...   473   e-131

>gb|EPS74753.1| hypothetical protein M569_00001, partial [Genlisea aurea]
          Length = 1380

 Score =  669 bits (1727), Expect = 0.0
 Identities = 346/546 (63%), Positives = 414/546 (75%), Gaps = 3/546 (0%)
 Frame = +3

Query: 3    IRRGNVKKADSASSHHQPKYCRYCNGKSKYGYPRMKFKVSSKDVFAKTAIIAEVHEMFVN 182
            IR+  +KK DSAS  +    C+YCN  S  GYP+MKF+VS+++VFAKTAIIAEV EM VN
Sbjct: 75   IRQRKIKKGDSASQQN----CKYCNVTS-LGYPKMKFRVSTREVFAKTAIIAEVQEMAVN 129

Query: 183  KSSDWVLASDYWDIIPKDPSQAHEGLPANKRVLSPAQVYNILKDVCPRTLEALVNRKNSI 362
            +     LASDYWDIIPKD  Q    +P+N+RVL P+QVY+ILKDVCP+TLEAL+ RKNSI
Sbjct: 130  QHHCIGLASDYWDIIPKDSPQDQSDIPSNRRVLYPSQVYSILKDVCPKTLEALLKRKNSI 189

Query: 363  FLNSLLVTPNSHRVREFGQRITVDETTKMYRKLVDFRGTPNELSARVLDRYKLSKIRSEK 542
            FLNSLLVTPNSHRVREFG  ITVD TT++YRKL DFRG+ NEL+ARVL+RY   KI SEK
Sbjct: 190  FLNSLLVTPNSHRVREFGGHITVDGTTRLYRKLTDFRGSANELNARVLERY---KICSEK 246

Query: 543  LSNLQKIYEKQXXXXXXXXXXGLKNIKELLLGKRTDHSFRMVVVGDPRIKVNEIGLPTQI 722
            +S ++KIYEKQ          GL+NIKEL+L KRTD++FRMVVVGDPR+KV+EIGLP QI
Sbjct: 247  VSAIEKIYEKQSSNDSASSSSGLRNIKELILAKRTDNAFRMVVVGDPRLKVDEIGLPIQI 306

Query: 723  AENVLISDHLNIWNWGKLEQCCEFMLKEK---GNFSVLRNGQRVCIWSKDMLQKGDSICR 893
            AE+VLISD ++I +WGKLE  C+ ML +K     FSV+RNGQ+  I+SKDMLQ GDSI R
Sbjct: 307  AESVLISDLISIHSWGKLESWCDLMLYKKAPFSPFSVIRNGQKTHIFSKDMLQVGDSISR 366

Query: 894  HLLDGDIVLINRPPSIHQHSLIALSVKILPINSVASINPLICSPLRGDFDGDCLHGYVPQ 1073
             + DGDIVLINRPPSIHQHSL+ALSVK+LPI SV +INPL C PLRGDFDGDCLHG+VPQ
Sbjct: 367  PISDGDIVLINRPPSIHQHSLLALSVKVLPIKSVIAINPLTCLPLRGDFDGDCLHGFVPQ 426

Query: 1074 SVNSRVELTELVSLDKQLVNGQDGRNXXXXXXXXXXXXXXXXENGVLLNKTEIQQLQMFC 1253
            S+NSRVE+ EL SL KQLVNGQ+GR+                 N V LNK E QQLQMFC
Sbjct: 427  SLNSRVEIGELASLKKQLVNGQNGRSLMSLGQDSLTAAYLILNNSVTLNKAEFQQLQMFC 486

Query: 1254 PCIPVLPAIIKPTSRSSLWTGKQLFSLLLPPDFEFAYESNGVCIRKGELVSSSHGSAWLN 1433
             C+P+LPAI+  +S  + WTGKQLF+LLLP D  F Y S+ VCIRKGEL+SSS+ ++WL 
Sbjct: 487  SCVPILPAIVNMSSNGTWWTGKQLFTLLLPVDSGFDYVSSDVCIRKGELISSSNCTSWLR 546

Query: 1434 DNSENIFQCLLRHNRDRALDFLNAGQEVLCEWLSRRGXXXXXXXXXXXXXTESRKNLLDE 1613
            D  EN++ CL+RH  DRAL FLN  QEVLCEWLSR+G               SRKNLL+E
Sbjct: 547  DADENLYLCLVRHCGDRALGFLNTAQEVLCEWLSRQGLSVSLSDLYISSDRHSRKNLLEE 606

Query: 1614 IHYGLE 1631
            ++YGL+
Sbjct: 607  VYYGLQ 612


>ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
            1-like [Vitis vinifera]
          Length = 1560

 Score =  544 bits (1401), Expect = e-152
 Identities = 296/548 (54%), Positives = 362/548 (66%), Gaps = 11/548 (2%)
 Frame = +3

Query: 18   VKKADSASSHHQPKYCRYCNGKSKYGYPRMKFKVSSKDVFAKTAIIAEVHEMFVNK---- 185
            VK ADS S   + K C+YC   S   YP MKFKVSSKD+F KTAII E++E    K    
Sbjct: 143  VKGADSGSRRLRSKGCKYCAANSNDWYPTMKFKVSSKDLFRKTAIIVEMNEKLPKKLQKK 202

Query: 186  SSDWVLASDYWDIIPKDPSQAHEGLPANKRVLSPAQVYNILKDVCPRTLEALVNRKNSIF 365
            S   VL  DYWD IPKDP Q    L  N+RVLS AQV+ +LKD+ P  ++  V+R +S F
Sbjct: 203  SFRPVLPLDYWDFIPKDPQQEENCLNPNRRVLSHAQVHYLLKDIDPGFIKEFVSRMDSFF 262

Query: 366  LNSLLVTPNSHRVREF------GQRITVDETTKMYRKLVDFRGTPNELSARVLDRYKLSK 527
            LN L VTPN+HRV E       GQ +  D+ ++ Y+KLVDFRGT NELS RVLD  K SK
Sbjct: 263  LNCLPVTPNNHRVTEITHALSNGQTLIFDQHSRAYKKLVDFRGTANELSCRVLDCLKTSK 322

Query: 528  IRSEKLSNLQKIYEKQXXXXXXXXXXGLKNIKELLLGKRTDHSFRMVVVGDPRIKVNEIG 707
            +RSEK ++     +            GLK IKE+LLGKRT+HSFRM+VVGDP+++++EIG
Sbjct: 323  LRSEKSTSKDSASKMS----------GLKWIKEVLLGKRTNHSFRMIVVGDPKLRLSEIG 372

Query: 708  LPTQIAENVLISDHLNIWNWGKLEQCCEFMLKEKGNFSVLRNGQRVCIWSKDMLQKGDSI 887
            +P  IAE +LIS+HLN WNW K+   C   L EKG   V R G    +   +  Q GD I
Sbjct: 373  IPCHIAEELLISEHLNSWNWEKVTNGCNLRLLEKGQTYVRRKGTLAPVRRMNDFQAGDII 432

Query: 888  CRHLLDGDIVLINRPPSIHQHSLIALSVKILPINSVASINPLICSPLRGDFDGDCLHGYV 1067
             R L DGDIVLINRPPSIHQHS+IALSVK+LP+NSV SINPL CSP RGDFDGDCLHGY+
Sbjct: 433  YRPLTDGDIVLINRPPSIHQHSVIALSVKVLPLNSVVSINPLCCSPFRGDFDGDCLHGYI 492

Query: 1068 PQSVNSRVELTELVSLDKQLVNGQDGRNXXXXXXXXXXXXXXXXENGVLLNKTEIQQLQM 1247
            PQSV+SRVEL+ELV+L++QL+N Q GRN                E+GVLLN  ++QQL+M
Sbjct: 493  PQSVDSRVELSELVALNRQLINRQSGRNLLSLSQDSLSAAHLVMEDGVLLNLFQMQQLEM 552

Query: 1248 FCPCIPVLPAIIK-PTSRSSLWTGKQLFSLLLPPDFEFAYESNGVCIRKGELVSSSHGSA 1424
            FCP     PAIIK P   + +WTGKQLFS+LLPP F + +  NGV I  GEL+SSS GSA
Sbjct: 553  FCPYQLQSPAIIKAPLLDTQVWTGKQLFSMLLPPGFNYVFPLNGVRISDGELISSSDGSA 612

Query: 1425 WLNDNSENIFQCLLRHNRDRALDFLNAGQEVLCEWLSRRGXXXXXXXXXXXXXTESRKNL 1604
            WL D   N+F  L++  + +ALDFL A QEVLCEWLS RG             + SRKN+
Sbjct: 613  WLRDIDGNLFSSLVKDCQGKALDFLYAAQEVLCEWLSMRGLSVSLSDIYLSSDSISRKNM 672

Query: 1605 LDEIHYGL 1628
            +DE+  GL
Sbjct: 673  IDEVFCGL 680


>ref|XP_004245657.1| PREDICTED: DNA-directed RNA polymerase D subunit 1 [Solanum
            lycopersicum]
          Length = 1446

 Score =  541 bits (1394), Expect = e-151
 Identities = 289/548 (52%), Positives = 373/548 (68%), Gaps = 5/548 (0%)
 Frame = +3

Query: 3    IRRGNVKKADSASSHHQPKYCRYCNGKSKYGYPRMKFKVSSKDVFAKTAIIAEVHEMF-- 176
            +RR  VK +D  S+      C+YC+G  + GYP  KFKVS KD+F +TAIIAEV+E    
Sbjct: 104  VRRDKVKVSDRTSA------CKYCDGVLR-GYPPTKFKVSPKDMFGRTAIIAEVNENLLK 156

Query: 177  -VNKSSDWVLASDYWDIIPKDPSQAHEGLPAN-KRVLSPAQVYNILKDVCPRTLEALVNR 350
             V K++   LASDYWD IP D  Q      +N KRVLS AQVY+ILKD+ P  LE L+ R
Sbjct: 157  KVQKTTGVSLASDYWDFIPYDAQQEASVNSSNYKRVLSHAQVYSILKDIDPGFLEGLLRR 216

Query: 351  KNSIFLNSLLVTPNSHRVREFGQRITVDETTKMYRKLVDFRGTPNELSARVLDRYKLSKI 530
            KNSIFL S L+TPNSHRV EFGQ +  DE+ ++YRKL+DFRGT N+LS  VLDR K+SKI
Sbjct: 217  KNSIFLKSCLLTPNSHRVTEFGQHMIFDESNRLYRKLIDFRGTANDLSMCVLDRIKVSKI 276

Query: 531  RSEKLSNLQKIYEKQXXXXXXXXXXGLKNIKELLLGKRTDHSFRMVVVGDPRIKVNEIGL 710
            R+++                     GLK +KEL+L KRT+H+FRMVVVGDP I++ EIG+
Sbjct: 277  RADR----------SVINDPNAPATGLKYVKELVLAKRTNHAFRMVVVGDPNIELGEIGI 326

Query: 711  PTQIAENVLISDHLNIWNWGKLEQCCEFMLKEKGNFSVLRNGQRVCIWSKDMLQKGDSIC 890
            P  +AEN+ +++ L++ NW ++   C+ M+ ++G   V RNG  V I   D LQKGD I 
Sbjct: 327  PCHVAENLHMAETLSLRNWERMTDLCDLMILQRGGILVRRNGVLVRISVMDGLQKGDIIH 386

Query: 891  RHLLDGDIVLINRPPSIHQHSLIALSVKILPINSVASINPLICSPLRGDFDGDCLHGYVP 1070
            R L+DGD+V+INRPPSIHQHSLIALSV+ILPINSV SINPL+CSP RGDFDGDCLHGY+P
Sbjct: 387  RPLVDGDVVMINRPPSIHQHSLIALSVRILPINSVLSINPLVCSPFRGDFDGDCLHGYIP 446

Query: 1071 QSVNSRVELTELVSLDKQLVNGQDGRNXXXXXXXXXXXXXXXXENGVLLNKTEIQQLQMF 1250
            QS++S +EL+ELV+L +QL++GQ+G+N                E GV L++ ++QQLQMF
Sbjct: 447  QSIDSTIELSELVALKQQLLDGQNGQNLLSLSHDSLTAAHLILEPGVFLDRFQMQQLQMF 506

Query: 1251 CPCIPVLPAIIK-PTSRSSLWTGKQLFSLLLPPDFEFAYESNGVCIRKGELVSSSHGSAW 1427
            CP    + AI+K P      WTGKQLFSLLLP D E+ + SNGVCI +GE+V+SS GS+W
Sbjct: 507  CPRQLGMTAIVKAPPGNICYWTGKQLFSLLLPSDLEYVFPSNGVCISEGEIVTSSGGSSW 566

Query: 1428 LNDNSENIFQCLLRHNRDRALDFLNAGQEVLCEWLSRRGXXXXXXXXXXXXXTESRKNLL 1607
            L D S+N+F  L++HN    LD L A Q VLCEWLS RG             + SR+N++
Sbjct: 567  LRDASDNLFYSLVKHNGGDTLDLLYAAQTVLCEWLSMRGLSVSLSDLYISADSYSRENMI 626

Query: 1608 DEIHYGLE 1631
            DE+  GL+
Sbjct: 627  DEVCSGLQ 634


>emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]
          Length = 1393

 Score =  540 bits (1391), Expect = e-151
 Identities = 297/548 (54%), Positives = 360/548 (65%), Gaps = 11/548 (2%)
 Frame = +3

Query: 18   VKKADSASSHHQPKYCRYCNGKSKYGYPRMKFKVSSKDVFAKTAIIAEVHEMFVNK---- 185
            VK ADS S   + K C+YC   S   YP MKFKVSSKD+F KTAII E++E    K    
Sbjct: 110  VKGADSGSRRLRSKGCKYCAANSNDWYPTMKFKVSSKDLFRKTAIIVEMNEKLPKKLQKK 169

Query: 186  SSDWVLASDYWDIIPKDPSQAHEGLPANKRVLSPAQVYNILKDVCPRTLEALVNRKNSIF 365
            S   VL  DYWD IPKDP Q    L  N+RVLS AQV+ +LKD+ P  ++  V+R +S F
Sbjct: 170  SFRPVLPLDYWDFIPKDPQQEENCLNPNRRVLSHAQVHYLLKDIDPGFIKEFVSRMDSFF 229

Query: 366  LNSLLVTPNSHRVREF------GQRITVDETTKMYRKLVDFRGTPNELSARVLDRYKLSK 527
            LN L VTPN+HRV E       GQ +  D+ ++ Y+KLVDFRGT NELS RVLD  K SK
Sbjct: 230  LNCLPVTPNNHRVTEITHALSNGQTLIFDQHSRAYKKLVDFRGTANELSCRVLDCLKTSK 289

Query: 528  IRSEKLSNLQKIYEKQXXXXXXXXXXGLKNIKELLLGKRTDHSFRMVVVGDPRIKVNEIG 707
                  SNL+   EK           GLK IKE+LLGKRT+HSFRM+VVGDP+++++EIG
Sbjct: 290  A-----SNLRS--EKSTSKDSASKMSGLKWIKEVLLGKRTNHSFRMIVVGDPKLRLSEIG 342

Query: 708  LPTQIAENVLISDHLNIWNWGKLEQCCEFMLKEKGNFSVLRNGQRVCIWSKDMLQKGDSI 887
            +P  IAE +LIS+HLN WNW K+   C   L EKG   V R G    +   +  Q GD I
Sbjct: 343  IPCHIAEELLISEHLNSWNWEKVTNGCNLRLLEKGQTYVRRKGTLAPVRRMNDFQAGDII 402

Query: 888  CRHLLDGDIVLINRPPSIHQHSLIALSVKILPINSVASINPLICSPLRGDFDGDCLHGYV 1067
             R L DGDIVLINRPPSIHQHS+IALSVK+LP+NSV SINPL CSP RGDFDGDCLHGY+
Sbjct: 403  YRPLTDGDIVLINRPPSIHQHSVIALSVKVLPLNSVVSINPLCCSPFRGDFDGDCLHGYI 462

Query: 1068 PQSVNSRVELTELVSLDKQLVNGQDGRNXXXXXXXXXXXXXXXXENGVLLNKTEIQQLQM 1247
            PQSV+SRVEL+ELV+L++QL+N Q GRN                E+GVLLN  ++QQL+M
Sbjct: 463  PQSVDSRVELSELVALNRQLINRQSGRNLLSLSQDSLSAAHLVMEDGVLLNLFQMQQLEM 522

Query: 1248 FCPCIPVLPAIIK-PTSRSSLWTGKQLFSLLLPPDFEFAYESNGVCIRKGELVSSSHGSA 1424
            FCP     PAIIK P   + +WTGKQLFS+LLPP F + +  NGV I  GEL+SSS GSA
Sbjct: 523  FCPYQLQSPAIIKAPLLDTQVWTGKQLFSMLLPPGFNYVFPLNGVRISDGELISSSDGSA 582

Query: 1425 WLNDNSENIFQCLLRHNRDRALDFLNAGQEVLCEWLSRRGXXXXXXXXXXXXXTESRKNL 1604
            WL D   N+F  L++  + +ALDFL A QEVLCEWLS RG             + SRKN+
Sbjct: 583  WLRDIDGNLFSSLVKDCQGKALDFLYAAQEVLCEWLSMRGLSVSLSDIYLSSDSISRKNM 642

Query: 1605 LDEIHYGL 1628
            +DE+  GL
Sbjct: 643  IDEVFCGL 650


>ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
            [Solanum tuberosum]
          Length = 1446

 Score =  540 bits (1390), Expect = e-151
 Identities = 287/548 (52%), Positives = 371/548 (67%), Gaps = 5/548 (0%)
 Frame = +3

Query: 3    IRRGNVKKADSASSHHQPKYCRYCNGKSKYGYPRMKFKVSSKDVFAKTAIIAEVHEMFVN 182
            +RR  VK +D  S+      C+YC+G  + GYP  KFKVS KD+F +TAIIAEV+E  + 
Sbjct: 104  VRRDKVKGSDRTSA------CKYCDGVLR-GYPPTKFKVSPKDMFGRTAIIAEVNENLLK 156

Query: 183  KSSDWV---LASDYWDIIPKDPSQAHEGLPAN-KRVLSPAQVYNILKDVCPRTLEALVNR 350
            K        LASDYWD IP D  Q      +N KRVLS AQVY+ILKD+ P  LE L+ R
Sbjct: 157  KVQQTTGVSLASDYWDFIPYDAQQEASVNSSNYKRVLSHAQVYSILKDIDPGFLEGLLKR 216

Query: 351  KNSIFLNSLLVTPNSHRVREFGQRITVDETTKMYRKLVDFRGTPNELSARVLDRYKLSKI 530
            KNSIFL S L+TPNSHRV EFGQ +  DE+ ++YRKL+DFRGT N+LS  VLDR K+SKI
Sbjct: 217  KNSIFLKSCLLTPNSHRVTEFGQHMIFDESNRLYRKLIDFRGTANDLSMCVLDRIKVSKI 276

Query: 531  RSEKLSNLQKIYEKQXXXXXXXXXXGLKNIKELLLGKRTDHSFRMVVVGDPRIKVNEIGL 710
            R+++                     GLK +KEL+L KRT+H+FRMVVVGDP I++ EIG+
Sbjct: 277  RADR----------SVINDPNAPATGLKYVKELVLAKRTNHAFRMVVVGDPNIELGEIGI 326

Query: 711  PTQIAENVLISDHLNIWNWGKLEQCCEFMLKEKGNFSVLRNGQRVCIWSKDMLQKGDSIC 890
            P  +AEN+ +++ L++ NW ++   C+ M+ ++G   V RNG  V I   D LQ GD I 
Sbjct: 327  PCHVAENLHMAESLSLRNWERMTDLCDLMILQRGGILVRRNGVLVRISVMDRLQNGDIIH 386

Query: 891  RHLLDGDIVLINRPPSIHQHSLIALSVKILPINSVASINPLICSPLRGDFDGDCLHGYVP 1070
            R L+DGD+V+INRPPSIHQHSLIALSV+ILPINSV SINPL+CSP RGDFDGDCLHGY+P
Sbjct: 387  RPLIDGDVVMINRPPSIHQHSLIALSVRILPINSVLSINPLVCSPFRGDFDGDCLHGYIP 446

Query: 1071 QSVNSRVELTELVSLDKQLVNGQDGRNXXXXXXXXXXXXXXXXENGVLLNKTEIQQLQMF 1250
            QS++SR+EL+ELV+L +QL++GQ+G+N                E GV L++ ++QQLQMF
Sbjct: 447  QSIDSRIELSELVALKQQLLDGQNGQNLLSLSHDSLTAAHLILEPGVFLDRFQMQQLQMF 506

Query: 1251 CPCIPVLPAIIK-PTSRSSLWTGKQLFSLLLPPDFEFAYESNGVCIRKGELVSSSHGSAW 1427
            CP    + AI+K P      WTGKQLFSLLLP D E+ + SNGVCI +GE+V+SS GS+W
Sbjct: 507  CPRQLGMTAIVKAPPGNLCYWTGKQLFSLLLPSDLEYVFPSNGVCISEGEIVTSSGGSSW 566

Query: 1428 LNDNSENIFQCLLRHNRDRALDFLNAGQEVLCEWLSRRGXXXXXXXXXXXXXTESRKNLL 1607
            L D S+N+F  L++H+    LD L A Q VLCEWLS RG             + SR+N++
Sbjct: 567  LRDVSDNLFYSLVKHHGGDTLDLLYAAQTVLCEWLSMRGLSVSLSDLYISSDSYSRENMI 626

Query: 1608 DEIHYGLE 1631
            DE+  GL+
Sbjct: 627  DEVCSGLQ 634


>gb|EOY24612.1| DNA-directed RNA polymerase II subunit RPB1-B, putative [Theobroma
            cacao]
          Length = 1484

 Score =  531 bits (1368), Expect = e-148
 Identities = 282/550 (51%), Positives = 362/550 (65%), Gaps = 12/550 (2%)
 Frame = +3

Query: 18   VKKADSASSHHQPKYCRYCNGKSKYGYPRMKFKVSSKDVFAKTAIIAEVHE---MFVNKS 188
            +K A+S S  +Q K C+YC G S   YP M FK+SSKD+F K+AII EV E   M V K 
Sbjct: 113  IKGANSVSKVNQRKGCKYCVGNSIDWYPPMNFKISSKDLFRKSAIIVEVSEKSSMKVRKR 172

Query: 189  SDWVLASDYWDIIPKDPSQAHEGLPANKRVLSPAQVYNILKDVCPRTLEALVNRKNSIFL 368
                L SDYWD IPKD  Q    +  N+RVLS +QV  +LKDV P  ++  V   +SIFL
Sbjct: 173  GKQALPSDYWDFIPKDEQQEESLIRPNRRVLSHSQVRYLLKDVDPEFIKKFVLSMDSIFL 232

Query: 369  NSLLVTPNSHRVREF------GQRITVDETTKMYRKLVDFRGTPNELSARVLDRYKLSKI 530
            N   VTPNSHRV E       GQR+  D+ T++Y+KL DFRG  NELS+ VL+  K+SK+
Sbjct: 233  NCFPVTPNSHRVTEIMHASSNGQRLIFDQRTRVYKKLADFRGIANELSSHVLECLKISKL 292

Query: 531  RSEKLSNLQK--IYEKQXXXXXXXXXXGLKNIKELLLGKRTDHSFRMVVVGDPRIKVNEI 704
              EK SN +   +  ++          GL+ +K+++LGKR DH FRMV+ G+P +K++EI
Sbjct: 293  HLEKPSNEESALVLAQKRNKDSASNMSGLRYMKDVILGKRNDHCFRMVLTGNPNLKLSEI 352

Query: 705  GLPTQIAENVLISDHLNIWNWGKLEQCCEFMLKEKGNFSVLRNGQRVCIWSKDMLQKGDS 884
             +P  +AE + I++ LN WN  +L+ CC+  L EKG   V R G+ V I   + LQ GD+
Sbjct: 353  SIPCHVAERLQIAEQLNNWNEERLKACCDLRLLEKGEIHVRREGRLVRIRHNEKLQVGDT 412

Query: 885  ICRHLLDGDIVLINRPPSIHQHSLIALSVKILPINSVASINPLICSPLRGDFDGDCLHGY 1064
            I R L +GDI+LINRPPSIHQHSLIALSVK+LP++SV SINPLICSP RGDFDGDCLHGY
Sbjct: 413  IFRPLNNGDIILINRPPSIHQHSLIALSVKVLPVSSVVSINPLICSPFRGDFDGDCLHGY 472

Query: 1065 VPQSVNSRVELTELVSLDKQLVNGQDGRNXXXXXXXXXXXXXXXXENGVLLNKTEIQQLQ 1244
            VPQS+ +RVEL ELVSL++QL+NGQ GRN                E+GVLLN  ++QQL+
Sbjct: 473  VPQSIKARVELIELVSLNRQLINGQSGRNLLSLSHDSLTAAYLVKEDGVLLNLFQMQQLE 532

Query: 1245 MFCPCIPVLPAIIK-PTSRSSLWTGKQLFSLLLPPDFEFAYESNGVCIRKGELVSSSHGS 1421
            MFCP     PAI+K P  RSS+WTGKQL S+L P +F++ +  N V IR GEL+SSS GS
Sbjct: 533  MFCPNHSPFPAIVKAPLLRSSVWTGKQLLSMLFPLEFDYDFTPNDVVIRNGELISSSEGS 592

Query: 1422 AWLNDNSENIFQCLLRHNRDRALDFLNAGQEVLCEWLSRRGXXXXXXXXXXXXXTESRKN 1601
             WL D   N+FQ L++H + + LDFL A QEVLCEWLS RG             + S+KN
Sbjct: 593  TWLRDADGNLFQSLIKHYQGKVLDFLYAAQEVLCEWLSMRGLSVSLSDLYLSSDSNSQKN 652

Query: 1602 LLDEIHYGLE 1631
            ++DEI  GL+
Sbjct: 653  MMDEIFCGLQ 662


>ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Cucumis
            sativus] gi|449494342|ref|XP_004159519.1| PREDICTED: LOW
            QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
            1-like [Cucumis sativus]
          Length = 1469

 Score =  496 bits (1277), Expect = e-137
 Identities = 273/550 (49%), Positives = 353/550 (64%), Gaps = 13/550 (2%)
 Frame = +3

Query: 21   KKADSASSHHQPKYCRYCNGKSKYGYPRMKFKVSSKDVFAKTAIIAEVHEMFVNKSSDWV 200
            K  D  S +++PK CRYC G  K  YP M+FK+S+ D+F K+ I+ EV E    K    V
Sbjct: 111  KVEDPTSDYNRPKGCRYCFGSLKDWYPPMRFKLSTTDMFKKSMIMVEVKENMSKKYQKRV 170

Query: 201  ----LASDYWDIIPKDPSQAHEGLPANKRVLSPAQVYNILKDVCPRTLEALVNRKNSIFL 368
                L SDYWD IPKD  Q       N+++L+ AQV+ +LKD+ P+ L+  V   +S+FL
Sbjct: 171  AKGGLPSDYWDFIPKDEQQEESYCRPNRKILTHAQVHYLLKDIDPKFLKKFVPAIDSLFL 230

Query: 369  NSLLVTPNSHRVREF------GQRITVDETTKMYRKLVDFRGTPNELSARVLDRYKLSK- 527
            NS  VTPNSHRV E       GQR+  DE T+ Y+K+VDFRGT NEL +RVLD  K+SK 
Sbjct: 231  NSFPVTPNSHRVTEMAHSFSNGQRLIFDERTRAYKKVVDFRGTANELGSRVLDCLKISKA 290

Query: 528  IRSEKLSNLQKI-YEKQXXXXXXXXXXGLKNIKELLLGKRTDHSFRMVVVGDPRIKVNEI 704
            I +  +  L  + Y ++          GL+ IK+++LGKR+DH FRMVVVGDP I+++EI
Sbjct: 291  IYNIFVFCLNHVNYYQKKIKDTATSSSGLRWIKDVVLGKRSDHCFRMVVVGDPNIELSEI 350

Query: 705  GLPTQIAENVLISDHLNIWNWGKLEQCCEFMLKEKGNFSVLRNGQRVCIWSKDMLQKGDS 884
            G+P  +AE + IS+HL+ WN  KL   C   L EKG   V R G+ V + +   L  GD+
Sbjct: 351  GIPCHVAERLQISEHLSSWNMKKLSTSCYLHLVEKGEIYVRREGRLVRVRNVLELNMGDT 410

Query: 885  ICRHLLDGDIVLINRPPSIHQHSLIALSVKILPINSVASINPLICSPLRGDFDGDCLHGY 1064
            I R L DGDIVL+NRPPSIHQHSLIALSVK+LP+++V S+NPL CSP RGDFDGDCLHGY
Sbjct: 411  IYRPLADGDIVLVNRPPSIHQHSLIALSVKLLPVSAVLSLNPLCCSPFRGDFDGDCLHGY 470

Query: 1065 VPQSVNSRVELTELVSLDKQLVNGQDGRNXXXXXXXXXXXXXXXXENGVLLNKTEIQQLQ 1244
            VPQS+ +RVE+ ELVSLDKQL NGQ GRN                E+GV LN  ++QQLQ
Sbjct: 471  VPQSLEARVEVRELVSLDKQLTNGQSGRNLLSLSHDSLTAAHLILEDGVSLNLFQMQQLQ 530

Query: 1245 MFCPCIPVLPAIIK-PTSRSSLWTGKQLFSLLLPPDFEFAYESNGVCIRKGELVSSSHGS 1421
            M      + PAI+K P  R+  WTGKQLFS+LLPPDF+++  S+ V I KGEL+ SS GS
Sbjct: 531  MLTLHQLLPPAIVKSPLLRNCAWTGKQLFSILLPPDFDYSSPSHNVFIEKGELI-SSEGS 589

Query: 1422 AWLNDNSENIFQCLLRHNRDRALDFLNAGQEVLCEWLSRRGXXXXXXXXXXXXXTESRKN 1601
             WL D+  N+FQ L+ H   + LD+L   Q VLCEWLS RG             + S +N
Sbjct: 590  YWLRDSGRNLFQALIEHCEGKTLDYLRDAQGVLCEWLSTRGLSVSLSDLYLSVDSYSHEN 649

Query: 1602 LLDEIHYGLE 1631
            ++D+I  GL+
Sbjct: 650  MMDDIFCGLQ 659


>ref|XP_006590533.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like [Glycine
            max]
          Length = 1369

 Score =  489 bits (1258), Expect = e-135
 Identities = 263/535 (49%), Positives = 351/535 (65%), Gaps = 12/535 (2%)
 Frame = +3

Query: 63   CRYCNGKSKYGYPRMKFKVSSKDVFAKTAIIAEVHEMFVNKSSDWVLASDYWDIIPKDPS 242
            C YC+      YP MKF+VSS D+F +TAII EV      K+    + +DYW+ IP D  
Sbjct: 37   CNYCSA-----YPSMKFRVSSNDLFRRTAIIVEVKAS--KKTLGTEIPADYWNFIPCDAQ 89

Query: 243  QAHEGLPANKRVLSPAQVYNILKDVCPRTLEALVNRKNSIFLNSLLVTPNSHRVREF--- 413
            Q    +  N+RVLSPAQV N+L  V P  +E  + RKN ++LN   VTPN HRV E    
Sbjct: 90   QEENYV--NRRVLSPAQVLNLLNGVDPDFIEKYIPRKNLLYLNCFPVTPNCHRVTEVPYA 147

Query: 414  ---GQRITVDETTKMYRKLVDFRGTPNELSARVLDRYKLSKIRSEKLSN-LQKIYEKQXX 581
               G R++ D+ T+  +KLVDFRGTPNELS+RVLD  ++SK+  +K  N +    +++  
Sbjct: 148  ISSGSRLSFDDRTRSCKKLVDFRGTPNELSSRVLDCLRISKLNPDKTPNSIFADIQQRKI 207

Query: 582  XXXXXXXXGLKNIKELLLGKRTDHSFRMVVVGDPRIKVNEIGLPTQIAENVLISDHLNIW 761
                    GL+ IK+++LGKR D S R VVVGDP ++++E+G+P  IAE++ +S+++N  
Sbjct: 208  GENACNSSGLRWIKDVVLGKRNDSSLRTVVVGDPDLELSEVGIPCHIAESLQVSEYVNRQ 267

Query: 762  NWGKLEQCCEFMLKEKGNFSVLRNGQRVCIWSKDMLQKGDSICRHLLDGDIVLINRPPSI 941
            N  KL  CCE  L EKG   V RNG +V ++ K+ LQ GD I R L DGD VLINRPPSI
Sbjct: 268  NREKLLYCCELRLLEKGKIDVCRNGSKVHLYKKEDLQIGDKIYRPLADGDKVLINRPPSI 327

Query: 942  HQHSLIALSVKILPINSVASINPLICSPLRGDFDGDCLHGYVPQSVNSRVELTELVSLDK 1121
            HQHS+IAL+V++LPI+SV  INPL CSPLRGDFDGDCLHGY+PQSV +R+EL ELV+LD+
Sbjct: 328  HQHSMIALTVRVLPISSVVCINPLCCSPLRGDFDGDCLHGYIPQSVTARIELNELVALDR 387

Query: 1122 QLVNGQDGRNXXXXXXXXXXXXXXXXENGVLLNKTEIQQLQMFC----PCIPVLPAIIK- 1286
            QL+NGQ GRN                E+GVLLN  ++QQLQM        IP  PA++K 
Sbjct: 388  QLINGQSGRNLLSLSQDSLTAAYLLMEDGVLLNVYQMQQLQMLSISDKRLIP--PAVVKA 445

Query: 1287 PTSRSSLWTGKQLFSLLLPPDFEFAYESNGVCIRKGELVSSSHGSAWLNDNSENIFQCLL 1466
            P+S SSLW+GKQ+FS+LLP DF++++ S+GV +  GELVSSS  S WL D+  N+FQ L+
Sbjct: 446  PSSNSSLWSGKQIFSMLLPYDFDYSFPSDGVVVSDGELVSSSEASGWLRDSDYNVFQSLV 505

Query: 1467 RHNRDRALDFLNAGQEVLCEWLSRRGXXXXXXXXXXXXXTESRKNLLDEIHYGLE 1631
             H + + L+FL   Q+VLCEWLS  G             + +RKN+++EI YGL+
Sbjct: 506  EHYQGKTLNFLYTAQKVLCEWLSMTGFSVSLSDLYLSSDSYARKNMIEEIFYGLQ 560


>ref|XP_002509696.1| DNA-directed RNA polymerase, putative [Ricinus communis]
            gi|223549595|gb|EEF51083.1| DNA-directed RNA polymerase,
            putative [Ricinus communis]
          Length = 1475

 Score =  488 bits (1255), Expect = e-135
 Identities = 269/524 (51%), Positives = 339/524 (64%), Gaps = 12/524 (2%)
 Frame = +3

Query: 96   YPRMKFKVSSKDVFAKTAIIAEVHEMFVNKSSDW----VLASDYWDIIPKDPSQAHEGLP 263
            YP MKF VSS+++F K  IIA+  E   NKS        LA+DYWDIIPKD  Q      
Sbjct: 131  YPAMKFSVSSEEIFRKNVIIAKFSERPTNKSQKRGFKKKLAADYWDIIPKDEQQEENITR 190

Query: 264  ANKRVLSPAQVYNILKDVCPRTLEALVNRKNSIFLNSLLVTPNSHRVREF------GQRI 425
             N+RVLS AQV ++L+++ P  +   V +++SIFLN   VTPN HRV E       GQR+
Sbjct: 191  PNQRVLSHAQVIHLLENIDPNFIRKFVLKRDSIFLNCFSVTPNCHRVTEVTHAFSNGQRL 250

Query: 426  TVDETTKMYRKLVDFRGTPNELSARVLDRYKLSKIRSEK-LSNLQKIYEKQXXXXXXXXX 602
              D+ T+ Y+K+VDFRG   ELS RVLD  K SKI  +K ++N   +  ++         
Sbjct: 251  VFDDRTRAYKKMVDFRGIAKELSFRVLDCLKTSKINPDKSVNNDDYMALQRKMNDSSSSS 310

Query: 603  XGLKNIKELLLGKRTDHSFRMVVVGDPRIKVNEIGLPTQIAENVLISDHLNIWNWGKLEQ 782
             GL+ IK+++LGKR D+SFRMVVVGDP IK +EIG+P  IAE + IS+HL  WNW KL  
Sbjct: 311  SGLRWIKDVVLGKRNDNSFRMVVVGDPNIKFSEIGIPCPIAERLQISEHLTTWNWDKLNT 370

Query: 783  CCEFMLKEKGNFSVLRNGQRVCIWSKDMLQKGDSICRHLLDGDIVLINRPPSIHQHSLIA 962
            CCE  L EKG+  V R G+ V +     L+ GD I R L DGD VLINRPPSIHQHSLIA
Sbjct: 371  CCEVRLLEKGDMHVRREGKLVRVRRTKELRIGDIIYRPLNDGDTVLINRPPSIHQHSLIA 430

Query: 963  LSVKILPINSVASINPLICSPLRGDFDGDCLHGYVPQSVNSRVELTELVSLDKQLVNGQD 1142
            LSVK+LP  SV +INPLIC+P RGDFDGDCLHGYVPQSV++RVEL ELV+LDKQL+N Q+
Sbjct: 431  LSVKVLPATSVLAINPLICAPFRGDFDGDCLHGYVPQSVDTRVELRELVALDKQLINVQN 490

Query: 1143 GRNXXXXXXXXXXXXXXXXENGVLLNKTEIQQLQMFCPCIPVLPAIIK-PTSRSSLWTGK 1319
            GRN                E+GVLL+  ++QQLQMFCP     PA+ K P+     WTGK
Sbjct: 491  GRNLLSFSQDSLVAAHLVMEDGVLLSLQQMQQLQMFCPHQLFSPAVRKAPSLNGCAWTGK 550

Query: 1320 QLFSLLLPPDFEFAYESNGVCIRKGELVSSSHGSAWLNDNSENIFQCLLRHNRDRALDFL 1499
            QL S+LLP  F+    S+ V IR GEL+ SS GS WL D   N+FQ L++  +D+ LDFL
Sbjct: 551  QLISMLLPRGFDHECPSSDVYIRDGELI-SSEGSFWLRDTDGNLFQSLIKQCQDQVLDFL 609

Query: 1500 NAGQEVLCEWLSRRGXXXXXXXXXXXXXTESRKNLLDEIHYGLE 1631
               QEVLCEWLS RG             ++SR+N++DE+ +GL+
Sbjct: 610  YIAQEVLCEWLSMRGLSVSLSDLYLCPDSDSRENMMDEVLFGLQ 653


>ref|XP_006440521.1| hypothetical protein CICLE_v10018489mg [Citrus clementina]
            gi|557542783|gb|ESR53761.1| hypothetical protein
            CICLE_v10018489mg [Citrus clementina]
          Length = 1443

 Score =  485 bits (1249), Expect = e-134
 Identities = 266/542 (49%), Positives = 336/542 (61%), Gaps = 6/542 (1%)
 Frame = +3

Query: 21   KKADSASSHHQPKYCRYCNGKSKYGYPRMKFKVSSKDVFAKTAIIAEVHEMFVNKSSDWV 200
            +K   +S   QP+ C+YC       YPRM+FK+SSKD+  KTAII E+ E    K+    
Sbjct: 110  QKGAGSSRKEQPRVCKYCVRNPAQWYPRMRFKLSSKDLSGKTAIIVEIDEKLSKKNKK-- 167

Query: 201  LASDYWDIIPKDPSQAHEGLPANKRVLSPAQVYNILKDVCPRTLEALVNRKNSIFLNSLL 380
            L  DYW  IP D  Q    +  N++VLS  QV  +LKDV P   E  +  K++ FL    
Sbjct: 168  LPDDYWGFIPFDAQQEENSVKPNRKVLSCKQVSYLLKDVDPSIREEFILSKDAPFLKCFP 227

Query: 381  VTPNSHRVREFG------QRITVDETTKMYRKLVDFRGTPNELSARVLDRYKLSKIRSEK 542
            VTPN+HRV E        +++  D  T+  +K+VD+RG   ELS  V D  K+SK+  +K
Sbjct: 228  VTPNNHRVTEVPHAFSHEKKLFFDNWTRHLKKMVDYRGRDIELSHLVQDCLKISKLHLDK 287

Query: 543  LSNLQKIYEKQXXXXXXXXXXGLKNIKELLLGKRTDHSFRMVVVGDPRIKVNEIGLPTQI 722
             S       +Q          GL+ IK+++LGKR D  FRMVV GDP IK+ EIG+P Q+
Sbjct: 288  SSRKDSAEVRQKKNIDISNSSGLRWIKDVVLGKRNDDCFRMVVTGDPNIKLKEIGIPCQV 347

Query: 723  AENVLISDHLNIWNWGKLEQCCEFMLKEKGNFSVLRNGQRVCIWSKDMLQKGDSICRHLL 902
            AE + IS+ LN WNW +L  C  F L EKG   V R G  V I   D L+ GD I R L 
Sbjct: 348  AERLQISERLNSWNWERLSVCISFRLLEKGELYVCRKGGLVRIRRIDALELGDIIYRPLT 407

Query: 903  DGDIVLINRPPSIHQHSLIALSVKILPINSVASINPLICSPLRGDFDGDCLHGYVPQSVN 1082
            DGDIVLINRPPSIH HSLIAL+VK+LPI+SV +INPL CSP  GDFDGDCLHGY+PQ++ 
Sbjct: 408  DGDIVLINRPPSIHPHSLIALTVKVLPISSVVTINPLCCSPFHGDFDGDCLHGYIPQAIG 467

Query: 1083 SRVELTELVSLDKQLVNGQDGRNXXXXXXXXXXXXXXXXENGVLLNKTEIQQLQMFCPCI 1262
            +RVELTELV+LDKQL+N Q GRN                E+GVLL+  ++QQLQMFCP  
Sbjct: 468  ARVELTELVALDKQLINQQSGRNLLSLGQDSLTAAHLLMEDGVLLSHLQMQQLQMFCPHR 527

Query: 1263 PVLPAIIKPTSRSSLWTGKQLFSLLLPPDFEFAYESNGVCIRKGELVSSSHGSAWLNDNS 1442
             + P I K  S+ S+W+GKQLFS+LLPPDFE+ + S  V I  G+L+ S+ GS+WL D  
Sbjct: 528  FLSPDIFK-ISKDSVWSGKQLFSMLLPPDFEYTFPSKDVYISGGKLI-SAEGSSWLRDYE 585

Query: 1443 ENIFQCLLRHNRDRALDFLNAGQEVLCEWLSRRGXXXXXXXXXXXXXTESRKNLLDEIHY 1622
             N+FQ L++  RD+ LDFL A QEVLCEWLS RG             + SRK L+DEI Y
Sbjct: 586  GNLFQYLIKRYRDKVLDFLYAAQEVLCEWLSVRGMTVSLSDLYLASHSCSRKILMDEIFY 645

Query: 1623 GL 1628
            GL
Sbjct: 646  GL 647


>ref|XP_004298730.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Fragaria
            vesca subsp. vesca]
          Length = 1438

 Score =  484 bits (1247), Expect = e-134
 Identities = 268/534 (50%), Positives = 336/534 (62%), Gaps = 9/534 (1%)
 Frame = +3

Query: 57   KYCRYCNGKSKYGYPRMKFKVSSKDVFAKTAIIAEVHEMFVNKSSDWVLASDYWDIIPKD 236
            K CRYC   S   YPRM+FKVSS+++F ++ II E         +   L  DYWD IPKD
Sbjct: 116  KGCRYCFVSSS-DYPRMRFKVSSRELFRRSTIIVE---------AAGELPPDYWDFIPKD 165

Query: 237  PSQAHEGLPANKRVLSPAQVYNILKDVCPRTLEALVNRKNSIFLNSLLVTPNSHRVREF- 413
            P         +++VLS AQV+ +L DV    +   V   +S+ L+  LVTPN HRV E  
Sbjct: 166  PQHDETNTNPHRKVLSHAQVHFLLSDVDSNFITKFVPTTSSLSLDCFLVTPNCHRVTEVM 225

Query: 414  -----GQRITVDETTKMYRKLVDFRGTPNELSARVLDRYKLSKIRSEKLSNLQKIYEKQX 578
                 GQ +  D+ T+ YRKLVDFRGT NEL +RVLD  K+SKI  EK        E+Q 
Sbjct: 226  YSFNNGQSLMFDDRTRAYRKLVDFRGTANELGSRVLDCLKISKINKEKTGRDSISVEQQK 285

Query: 579  XXXXXXXXXGLKNIKELLLGKRTDHSFRMVVVGDPRIKVNEIGLPTQIAENVLISDHLNI 758
                     GL+ IK+++LGKR+DH FRMVVVGDP IK++EIG+P  IAE + IS++LN 
Sbjct: 286  IKDSPSRTSGLRWIKDVVLGKRSDHCFRMVVVGDPNIKLSEIGIPRHIAEKMQISENLNQ 345

Query: 759  WNWGKLEQCCEFMLKE--KGNFSVLRNGQRVCIWSKDMLQKGDSICRHLLDGDIVLINRP 932
            +N+ KL   C+  L    +G+  V RN   V I   + L+ GD I R L +GD+VLINRP
Sbjct: 346  YNFEKLFVFCQLRLGPDGRGDIHVRRNDSLVRIRKPEELEMGDIIYRALSNGDVVLINRP 405

Query: 933  PSIHQHSLIALSVKILPINSVASINPLICSPLRGDFDGDCLHGYVPQSVNSRVELTELVS 1112
            PSIHQHSLIAL+ K+LP+NSV SINPL CSP +GDFDGDCLHGYVPQSV +RVELTELV+
Sbjct: 406  PSIHQHSLIALTTKVLPVNSVVSINPLCCSPFQGDFDGDCLHGYVPQSVETRVELTELVA 465

Query: 1113 LDKQLVNGQDGRNXXXXXXXXXXXXXXXXENGVLLNKTEIQQLQMFCPCIPVLPAIIK-P 1289
            LDKQLVNGQ G N                E+G L+NK ++QQL M CP    LPA+IK P
Sbjct: 466  LDKQLVNGQSGTNLMSLSQDSLTAFYLITEDGTLMNKFQMQQLNMLCPHELPLPAVIKHP 525

Query: 1290 TSRSSLWTGKQLFSLLLPPDFEFAYESNGVCIRKGELVSSSHGSAWLNDNSENIFQCLLR 1469
            +  S  WT KQ+ S+ LP DF++A+ SNGV I  GEL++SS GS+WL D S N+FQ L  
Sbjct: 526  SGNSVSWTAKQIVSMFLPADFDYAFPSNGVYISNGELIASSEGSSWLRDTSGNLFQSLTE 585

Query: 1470 HNRDRALDFLNAGQEVLCEWLSRRGXXXXXXXXXXXXXTESRKNLLDEIHYGLE 1631
            H   + LD   + Q VLCEWLS RG             T SRKNL++EI YGL+
Sbjct: 586  HCHGQVLDIFFSAQGVLCEWLSMRGLSVSLSDLYLASDTCSRKNLMEEIFYGLQ 639


>ref|XP_004511611.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like isoform X5
            [Cicer arietinum]
          Length = 1474

 Score =  483 bits (1244), Expect = e-134
 Identities = 264/552 (47%), Positives = 352/552 (63%), Gaps = 10/552 (1%)
 Frame = +3

Query: 6    RRGNVKKADSASSHHQPKYCRYCNGKSKYGYPRMKFKVSSKDVFAKTAIIAEVHEMFVNK 185
            R   +K+  S    +QPK C+YC G     YP MKF+VSS D F +TAII EV+++ + K
Sbjct: 107  RELRIKRVKSLLGFNQPKGCKYC-GNGMGRYPTMKFRVSSNDFFRRTAIIVEVNDVALKK 165

Query: 186  SSDWV--LASDYWDIIPKDPSQAHEGLPANKRVLSPAQVYNILKDVCPRTLEALVNRKNS 359
              +    L +DYWD I  D  Q  E   AN+ VLSP QV NIL  V    ++  + R + 
Sbjct: 166  KRNLGRGLPADYWDFILGDAQQ--EENHANRMVLSPVQVENILSGVDSNFIKKYIPRMDL 223

Query: 360  IFLNSLLVTPNSHRVREFGQRIT------VDETTKMYRKLVDFRGTPNELSARVLDRYKL 521
            + L+  LV PN HRV E   R++       D  T+  +KLVDFRGT NELS+RVLD  + 
Sbjct: 224  VALSCFLVAPNCHRVTEVPHRLSGGYPLSFDNRTRACKKLVDFRGTANELSSRVLDCLRF 283

Query: 522  SKIRSEKL-SNLQKIYEKQXXXXXXXXXXGLKNIKELLLGKRTDHSFRMVVVGDPRIKVN 698
            SKI  +K  SN+    + +          GL+ +K+++LGKR D SFR VVVGDP ++++
Sbjct: 284  SKINPDKTPSNVFTEIQLRKVGENACNSSGLRWMKDIVLGKRNDSSFRTVVVGDPDLELS 343

Query: 699  EIGLPTQIAENVLISDHLNIWNWGKLEQCCEFMLKEKGNFSVLRNGQRVCIWSKDMLQKG 878
            EIGLP QIAE + +S+++N  N   L  CCE  L EKG  +V R G+ V ++ K+ +Q G
Sbjct: 344  EIGLPCQIAEGLQVSEYVNRQNKQNLLYCCELRLLEKGQINVCRKGRPVVLFKKEDVQIG 403

Query: 879  DSICRHLLDGDIVLINRPPSIHQHSLIALSVKILPINSVASINPLICSPLRGDFDGDCLH 1058
            D   R L+DGD VLINRPPSIHQHS+IAL+V++LPI+SV SINPL CSPLRGDFDGDCLH
Sbjct: 404  DIFYRPLVDGDRVLINRPPSIHQHSMIALTVRVLPISSVVSINPLCCSPLRGDFDGDCLH 463

Query: 1059 GYVPQSVNSRVELTELVSLDKQLVNGQDGRNXXXXXXXXXXXXXXXXENGVLLNKTEIQQ 1238
            GY+PQSV +RVEL ELV+LDKQL+NGQ GRN                E+GVLLN  ++QQ
Sbjct: 464  GYIPQSVGARVELNELVALDKQLINGQSGRNLLSLSQDSLTAAYLLLEDGVLLNVYQMQQ 523

Query: 1239 LQMFCPCIPVLPAIIK-PTSRSSLWTGKQLFSLLLPPDFEFAYESNGVCIRKGELVSSSH 1415
            LQM C    + PAI+K P+S +S W+GKQLFS+L+P  F++A+ S+GV +  GEL+S S 
Sbjct: 524  LQMHCSRKLIPPAIVKAPSSNTSCWSGKQLFSMLMPSSFDYAFPSDGVFVCDGELISCSE 583

Query: 1416 GSAWLNDNSENIFQCLLRHNRDRALDFLNAGQEVLCEWLSRRGXXXXXXXXXXXXXTESR 1595
             S WL D+  N+FQ L+ H + + LD L+  Q+ LCEWLS  G             + +R
Sbjct: 584  ASGWLRDSDNNVFQSLVEHFQGKTLDILHGAQKALCEWLSMTGFSVSLSDLYLSSDSYAR 643

Query: 1596 KNLLDEIHYGLE 1631
            KN+++EI YGL+
Sbjct: 644  KNMIEEISYGLQ 655


>ref|XP_004511607.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like isoform X1
            [Cicer arietinum] gi|502160026|ref|XP_004511608.1|
            PREDICTED: DNA-directed RNA polymerase D subunit 1-like
            isoform X2 [Cicer arietinum]
            gi|502160029|ref|XP_004511609.1| PREDICTED: DNA-directed
            RNA polymerase D subunit 1-like isoform X3 [Cicer
            arietinum] gi|502160032|ref|XP_004511610.1| PREDICTED:
            DNA-directed RNA polymerase D subunit 1-like isoform X4
            [Cicer arietinum]
          Length = 1475

 Score =  483 bits (1244), Expect = e-134
 Identities = 264/552 (47%), Positives = 352/552 (63%), Gaps = 10/552 (1%)
 Frame = +3

Query: 6    RRGNVKKADSASSHHQPKYCRYCNGKSKYGYPRMKFKVSSKDVFAKTAIIAEVHEMFVNK 185
            R   +K+  S    +QPK C+YC G     YP MKF+VSS D F +TAII EV+++ + K
Sbjct: 107  RELRIKRVKSLLGFNQPKGCKYC-GNGMGRYPTMKFRVSSNDFFRRTAIIVEVNDVALKK 165

Query: 186  SSDWV--LASDYWDIIPKDPSQAHEGLPANKRVLSPAQVYNILKDVCPRTLEALVNRKNS 359
              +    L +DYWD I  D  Q  E   AN+ VLSP QV NIL  V    ++  + R + 
Sbjct: 166  KRNLGRGLPADYWDFILGDAQQ--EENHANRMVLSPVQVENILSGVDSNFIKKYIPRMDL 223

Query: 360  IFLNSLLVTPNSHRVREFGQRIT------VDETTKMYRKLVDFRGTPNELSARVLDRYKL 521
            + L+  LV PN HRV E   R++       D  T+  +KLVDFRGT NELS+RVLD  + 
Sbjct: 224  VALSCFLVAPNCHRVTEVPHRLSGGYPLSFDNRTRACKKLVDFRGTANELSSRVLDCLRF 283

Query: 522  SKIRSEKL-SNLQKIYEKQXXXXXXXXXXGLKNIKELLLGKRTDHSFRMVVVGDPRIKVN 698
            SKI  +K  SN+    + +          GL+ +K+++LGKR D SFR VVVGDP ++++
Sbjct: 284  SKINPDKTPSNVFTEIQLRKVGENACNSSGLRWMKDIVLGKRNDSSFRTVVVGDPDLELS 343

Query: 699  EIGLPTQIAENVLISDHLNIWNWGKLEQCCEFMLKEKGNFSVLRNGQRVCIWSKDMLQKG 878
            EIGLP QIAE + +S+++N  N   L  CCE  L EKG  +V R G+ V ++ K+ +Q G
Sbjct: 344  EIGLPCQIAEGLQVSEYVNRQNKQNLLYCCELRLLEKGQINVCRKGRPVVLFKKEDVQIG 403

Query: 879  DSICRHLLDGDIVLINRPPSIHQHSLIALSVKILPINSVASINPLICSPLRGDFDGDCLH 1058
            D   R L+DGD VLINRPPSIHQHS+IAL+V++LPI+SV SINPL CSPLRGDFDGDCLH
Sbjct: 404  DIFYRPLVDGDRVLINRPPSIHQHSMIALTVRVLPISSVVSINPLCCSPLRGDFDGDCLH 463

Query: 1059 GYVPQSVNSRVELTELVSLDKQLVNGQDGRNXXXXXXXXXXXXXXXXENGVLLNKTEIQQ 1238
            GY+PQSV +RVEL ELV+LDKQL+NGQ GRN                E+GVLLN  ++QQ
Sbjct: 464  GYIPQSVGARVELNELVALDKQLINGQSGRNLLSLSQDSLTAAYLLLEDGVLLNVYQMQQ 523

Query: 1239 LQMFCPCIPVLPAIIK-PTSRSSLWTGKQLFSLLLPPDFEFAYESNGVCIRKGELVSSSH 1415
            LQM C    + PAI+K P+S +S W+GKQLFS+L+P  F++A+ S+GV +  GEL+S S 
Sbjct: 524  LQMHCSRKLIPPAIVKAPSSNTSCWSGKQLFSMLMPSSFDYAFPSDGVFVCDGELISCSE 583

Query: 1416 GSAWLNDNSENIFQCLLRHNRDRALDFLNAGQEVLCEWLSRRGXXXXXXXXXXXXXTESR 1595
             S WL D+  N+FQ L+ H + + LD L+  Q+ LCEWLS  G             + +R
Sbjct: 584  ASGWLRDSDNNVFQSLVEHFQGKTLDILHGAQKALCEWLSMTGFSVSLSDLYLSSDSYAR 643

Query: 1596 KNLLDEIHYGLE 1631
            KN+++EI YGL+
Sbjct: 644  KNMIEEISYGLQ 655


>gb|ESW30448.1| hypothetical protein PHAVU_002G153700g [Phaseolus vulgaris]
          Length = 1464

 Score =  478 bits (1231), Expect = e-132
 Identities = 259/531 (48%), Positives = 342/531 (64%), Gaps = 8/531 (1%)
 Frame = +3

Query: 63   CRYCNGKSKYGYPRMKFKVSSKDVFAKTAIIAEVHEMFVNKSSDWVLASDYWDIIPKDPS 242
            C+YC+G     YP MKFK SS D++ +TAII EV++    KS    L +DYWD +P D  
Sbjct: 123  CKYCSGNGVGRYPAMKFKFSSNDLYRRTAIIVEVNDKASKKSLGRSLPADYWDFLPYDAQ 182

Query: 243  QAHEGLPANKRVLSPAQVYNILKDVCPRTLEALVNRKNSIFLNSLLVTPNSHRVREF--- 413
            Q    +  N+RVLSP QV ++L DV P  +E  V R N I LN   VTPN HRV E    
Sbjct: 183  QEENYV--NRRVLSPGQVTSLLNDVDPNFIEKYVPRNNLITLNCFPVTPNCHRVTEVPYA 240

Query: 414  ---GQRITVDETTKMYRKLVDFRGTPNELSARVL-DRYKLSKIRSEKLSNLQKIYEKQXX 581
               G R++ D+ T+  +KLVDFRGT NELS+R+  D+  +S              +K+  
Sbjct: 241  ISNGNRLSFDDRTRSCKKLVDFRGTANELSSRLNPDKTPISIFAD---------IQKKKV 291

Query: 582  XXXXXXXXGLKNIKELLLGKRTDHSFRMVVVGDPRIKVNEIGLPTQIAENVLISDHLNIW 761
                    GL+ IK+++LGKR D +FR VVVGDP ++++EIG+P  IAE++ +S+++N  
Sbjct: 292  AENACNSSGLRWIKDVILGKRNDSTFRTVVVGDPSLELSEIGIPCHIAESLQVSEYVNRQ 351

Query: 762  NWGKLEQCCEFMLKEKGNFSVLRNGQRVCIWSKDMLQKGDSICRHLLDGDIVLINRPPSI 941
            N  KL  CCE  L EKG  +V R G  + ++ K+ LQ GD   R L DGD VLINRPPSI
Sbjct: 352  NLEKLLYCCELRLLEKGQINVCRKGSSIHLFKKEDLQIGDQFYRPLCDGDKVLINRPPSI 411

Query: 942  HQHSLIALSVKILPINSVASINPLICSPLRGDFDGDCLHGYVPQSVNSRVELTELVSLDK 1121
            HQHS+IAL+V++LPI+SV  INPL CSPLRGDFDGDCLHGY+PQSV++RVEL+ELV+LDK
Sbjct: 412  HQHSMIALTVRVLPISSVVCINPLCCSPLRGDFDGDCLHGYIPQSVSARVELSELVALDK 471

Query: 1122 QLVNGQDGRNXXXXXXXXXXXXXXXXENGVLLNKTEIQQLQMFCPCIPVLPAIIK-PTSR 1298
            QL NGQ GRN                E+GVLL+  ++QQLQM C      PAI+K P+S 
Sbjct: 472  QLFNGQSGRNLLSLSEDSLTAAYLLMEDGVLLDVYQMQQLQMLCNKGLAPPAIVKSPSSN 531

Query: 1299 SSLWTGKQLFSLLLPPDFEFAYESNGVCIRKGELVSSSHGSAWLNDNSENIFQCLLRHNR 1478
            SS W+GKQLFS+LLP DF++++ S+GV +  GELVSS   S WL D+  N+FQ L+ H +
Sbjct: 532  SSFWSGKQLFSMLLPSDFDYSFPSDGVVVSDGELVSSFEASGWLRDSDCNVFQGLVEHFQ 591

Query: 1479 DRALDFLNAGQEVLCEWLSRRGXXXXXXXXXXXXXTESRKNLLDEIHYGLE 1631
             ++L+FL A Q VLCEWLS  G             + +RKN+++EI YGL+
Sbjct: 592  GKSLNFLFAAQNVLCEWLSMTGFSVSLSDLYLSSDSYARKNMIEEICYGLQ 642


>gb|ESW30447.1| hypothetical protein PHAVU_002G153700g [Phaseolus vulgaris]
          Length = 1463

 Score =  478 bits (1231), Expect = e-132
 Identities = 259/531 (48%), Positives = 342/531 (64%), Gaps = 8/531 (1%)
 Frame = +3

Query: 63   CRYCNGKSKYGYPRMKFKVSSKDVFAKTAIIAEVHEMFVNKSSDWVLASDYWDIIPKDPS 242
            C+YC+G     YP MKFK SS D++ +TAII EV++    KS    L +DYWD +P D  
Sbjct: 123  CKYCSGNGVGRYPAMKFKFSSNDLYRRTAIIVEVNDKASKKSLGRSLPADYWDFLPYDAQ 182

Query: 243  QAHEGLPANKRVLSPAQVYNILKDVCPRTLEALVNRKNSIFLNSLLVTPNSHRVREF--- 413
            Q    +  N+RVLSP QV ++L DV P  +E  V R N I LN   VTPN HRV E    
Sbjct: 183  QEENYV--NRRVLSPGQVTSLLNDVDPNFIEKYVPRNNLITLNCFPVTPNCHRVTEVPYA 240

Query: 414  ---GQRITVDETTKMYRKLVDFRGTPNELSARVL-DRYKLSKIRSEKLSNLQKIYEKQXX 581
               G R++ D+ T+  +KLVDFRGT NELS+R+  D+  +S              +K+  
Sbjct: 241  ISNGNRLSFDDRTRSCKKLVDFRGTANELSSRLNPDKTPISIFAD---------IQKKKV 291

Query: 582  XXXXXXXXGLKNIKELLLGKRTDHSFRMVVVGDPRIKVNEIGLPTQIAENVLISDHLNIW 761
                    GL+ IK+++LGKR D +FR VVVGDP ++++EIG+P  IAE++ +S+++N  
Sbjct: 292  AENACNSSGLRWIKDVILGKRNDSTFRTVVVGDPSLELSEIGIPCHIAESLQVSEYVNRQ 351

Query: 762  NWGKLEQCCEFMLKEKGNFSVLRNGQRVCIWSKDMLQKGDSICRHLLDGDIVLINRPPSI 941
            N  KL  CCE  L EKG  +V R G  + ++ K+ LQ GD   R L DGD VLINRPPSI
Sbjct: 352  NLEKLLYCCELRLLEKGQINVCRKGSSIHLFKKEDLQIGDQFYRPLCDGDKVLINRPPSI 411

Query: 942  HQHSLIALSVKILPINSVASINPLICSPLRGDFDGDCLHGYVPQSVNSRVELTELVSLDK 1121
            HQHS+IAL+V++LPI+SV  INPL CSPLRGDFDGDCLHGY+PQSV++RVEL+ELV+LDK
Sbjct: 412  HQHSMIALTVRVLPISSVVCINPLCCSPLRGDFDGDCLHGYIPQSVSARVELSELVALDK 471

Query: 1122 QLVNGQDGRNXXXXXXXXXXXXXXXXENGVLLNKTEIQQLQMFCPCIPVLPAIIK-PTSR 1298
            QL NGQ GRN                E+GVLL+  ++QQLQM C      PAI+K P+S 
Sbjct: 472  QLFNGQSGRNLLSLSEDSLTAAYLLMEDGVLLDVYQMQQLQMLCNKGLAPPAIVKSPSSN 531

Query: 1299 SSLWTGKQLFSLLLPPDFEFAYESNGVCIRKGELVSSSHGSAWLNDNSENIFQCLLRHNR 1478
            SS W+GKQLFS+LLP DF++++ S+GV +  GELVSS   S WL D+  N+FQ L+ H +
Sbjct: 532  SSFWSGKQLFSMLLPSDFDYSFPSDGVVVSDGELVSSFEASGWLRDSDCNVFQGLVEHFQ 591

Query: 1479 DRALDFLNAGQEVLCEWLSRRGXXXXXXXXXXXXXTESRKNLLDEIHYGLE 1631
             ++L+FL A Q VLCEWLS  G             + +RKN+++EI YGL+
Sbjct: 592  GKSLNFLFAAQNVLCEWLSMTGFSVSLSDLYLSSDSYARKNMIEEICYGLQ 642


>ref|XP_006477376.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
            [Citrus sinensis] gi|568847098|ref|XP_006477377.1|
            PREDICTED: DNA-directed RNA polymerase IV subunit 1-like
            isoform X3 [Citrus sinensis]
            gi|568847100|ref|XP_006477378.1| PREDICTED: DNA-directed
            RNA polymerase IV subunit 1-like isoform X4 [Citrus
            sinensis]
          Length = 1443

 Score =  478 bits (1230), Expect = e-132
 Identities = 263/542 (48%), Positives = 334/542 (61%), Gaps = 6/542 (1%)
 Frame = +3

Query: 21   KKADSASSHHQPKYCRYCNGKSKYGYPRMKFKVSSKDVFAKTAIIAEVHEMFVNKSSDWV 200
            +K   +S   QP+ C+YC       YPRM+FK+SSKD+  KTAII E+ E    K+    
Sbjct: 110  QKGAGSSRKEQPRVCKYCVRNPAQWYPRMRFKLSSKDLSGKTAIIVEIDEKPSKKNKK-- 167

Query: 201  LASDYWDIIPKDPSQAHEGLPANKRVLSPAQVYNILKDVCPRTLEALVNRKNSIFLNSLL 380
            L  DYW  IP D  Q    +  N++VLS  QV  +LKDV P   E  +  K++ FL    
Sbjct: 168  LPDDYWGFIPFDAQQEENSVKPNRKVLSCKQVSYLLKDVDPSIREEFILSKDAPFLKCFP 227

Query: 381  VTPNSHRVREFG------QRITVDETTKMYRKLVDFRGTPNELSARVLDRYKLSKIRSEK 542
            VTPN+HRV E        +++  D  T+  +K+VD+RG   ELS  V D  K+SK+  +K
Sbjct: 228  VTPNNHRVTEVPHAFSHEKKLFFDNWTRHLKKMVDYRGRDIELSHLVQDCLKISKLHLDK 287

Query: 543  LSNLQKIYEKQXXXXXXXXXXGLKNIKELLLGKRTDHSFRMVVVGDPRIKVNEIGLPTQI 722
             S       +Q          GL+ IK+++LGKR D  FRMVV GDP IK+ EIG+P  +
Sbjct: 288  SSRKDSAEVRQKKNIDISNSSGLRWIKDVVLGKRNDDCFRMVVTGDPNIKLKEIGIPCHV 347

Query: 723  AENVLISDHLNIWNWGKLEQCCEFMLKEKGNFSVLRNGQRVCIWSKDMLQKGDSICRHLL 902
            AE + IS+ LN WNW +L  C  F L EKG   V R G  V I   D L+ GD I R L 
Sbjct: 348  AERLQISERLNSWNWERLSVCTSFRLLEKGELYVCRKGGLVRIRRIDALELGDIIYRPLT 407

Query: 903  DGDIVLINRPPSIHQHSLIALSVKILPINSVASINPLICSPLRGDFDGDCLHGYVPQSVN 1082
            DGDIVLINRPPSIH HSLIAL+VK+LPI+SV +INPL CSP  GDFDGDCLHGY+PQ++ 
Sbjct: 408  DGDIVLINRPPSIHPHSLIALTVKVLPISSVVTINPLCCSPFHGDFDGDCLHGYIPQAIG 467

Query: 1083 SRVELTELVSLDKQLVNGQDGRNXXXXXXXXXXXXXXXXENGVLLNKTEIQQLQMFCPCI 1262
            +RVELTELV+LDKQL+N Q GRN                E+ VLL+  ++QQLQMFCP  
Sbjct: 468  ARVELTELVALDKQLINQQSGRNLLSLGQDSLTAAHLLMEDSVLLSHLQMQQLQMFCPHR 527

Query: 1263 PVLPAIIKPTSRSSLWTGKQLFSLLLPPDFEFAYESNGVCIRKGELVSSSHGSAWLNDNS 1442
             + P I K  S+ S+W+GKQLFS+LLPPDFE+ + S  V I  G+L+ S+ GS+WL D  
Sbjct: 528  FLSPDIFK-ISKDSVWSGKQLFSMLLPPDFEYTFPSKDVYISGGKLI-SAEGSSWLRDYE 585

Query: 1443 ENIFQCLLRHNRDRALDFLNAGQEVLCEWLSRRGXXXXXXXXXXXXXTESRKNLLDEIHY 1622
             N+FQ L++  +D+ LDFL A QEVLCEWLS RG             + SRK L+DEI Y
Sbjct: 586  GNLFQYLIKRYQDKVLDFLYAAQEVLCEWLSVRGMTVSLSDLYLASHSCSRKILMDEIFY 645

Query: 1623 GL 1628
            GL
Sbjct: 646  GL 647


>ref|XP_006477375.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
            [Citrus sinensis]
          Length = 1481

 Score =  478 bits (1230), Expect = e-132
 Identities = 263/542 (48%), Positives = 334/542 (61%), Gaps = 6/542 (1%)
 Frame = +3

Query: 21   KKADSASSHHQPKYCRYCNGKSKYGYPRMKFKVSSKDVFAKTAIIAEVHEMFVNKSSDWV 200
            +K   +S   QP+ C+YC       YPRM+FK+SSKD+  KTAII E+ E    K+    
Sbjct: 148  QKGAGSSRKEQPRVCKYCVRNPAQWYPRMRFKLSSKDLSGKTAIIVEIDEKPSKKNKK-- 205

Query: 201  LASDYWDIIPKDPSQAHEGLPANKRVLSPAQVYNILKDVCPRTLEALVNRKNSIFLNSLL 380
            L  DYW  IP D  Q    +  N++VLS  QV  +LKDV P   E  +  K++ FL    
Sbjct: 206  LPDDYWGFIPFDAQQEENSVKPNRKVLSCKQVSYLLKDVDPSIREEFILSKDAPFLKCFP 265

Query: 381  VTPNSHRVREFG------QRITVDETTKMYRKLVDFRGTPNELSARVLDRYKLSKIRSEK 542
            VTPN+HRV E        +++  D  T+  +K+VD+RG   ELS  V D  K+SK+  +K
Sbjct: 266  VTPNNHRVTEVPHAFSHEKKLFFDNWTRHLKKMVDYRGRDIELSHLVQDCLKISKLHLDK 325

Query: 543  LSNLQKIYEKQXXXXXXXXXXGLKNIKELLLGKRTDHSFRMVVVGDPRIKVNEIGLPTQI 722
             S       +Q          GL+ IK+++LGKR D  FRMVV GDP IK+ EIG+P  +
Sbjct: 326  SSRKDSAEVRQKKNIDISNSSGLRWIKDVVLGKRNDDCFRMVVTGDPNIKLKEIGIPCHV 385

Query: 723  AENVLISDHLNIWNWGKLEQCCEFMLKEKGNFSVLRNGQRVCIWSKDMLQKGDSICRHLL 902
            AE + IS+ LN WNW +L  C  F L EKG   V R G  V I   D L+ GD I R L 
Sbjct: 386  AERLQISERLNSWNWERLSVCTSFRLLEKGELYVCRKGGLVRIRRIDALELGDIIYRPLT 445

Query: 903  DGDIVLINRPPSIHQHSLIALSVKILPINSVASINPLICSPLRGDFDGDCLHGYVPQSVN 1082
            DGDIVLINRPPSIH HSLIAL+VK+LPI+SV +INPL CSP  GDFDGDCLHGY+PQ++ 
Sbjct: 446  DGDIVLINRPPSIHPHSLIALTVKVLPISSVVTINPLCCSPFHGDFDGDCLHGYIPQAIG 505

Query: 1083 SRVELTELVSLDKQLVNGQDGRNXXXXXXXXXXXXXXXXENGVLLNKTEIQQLQMFCPCI 1262
            +RVELTELV+LDKQL+N Q GRN                E+ VLL+  ++QQLQMFCP  
Sbjct: 506  ARVELTELVALDKQLINQQSGRNLLSLGQDSLTAAHLLMEDSVLLSHLQMQQLQMFCPHR 565

Query: 1263 PVLPAIIKPTSRSSLWTGKQLFSLLLPPDFEFAYESNGVCIRKGELVSSSHGSAWLNDNS 1442
             + P I K  S+ S+W+GKQLFS+LLPPDFE+ + S  V I  G+L+ S+ GS+WL D  
Sbjct: 566  FLSPDIFK-ISKDSVWSGKQLFSMLLPPDFEYTFPSKDVYISGGKLI-SAEGSSWLRDYE 623

Query: 1443 ENIFQCLLRHNRDRALDFLNAGQEVLCEWLSRRGXXXXXXXXXXXXXTESRKNLLDEIHY 1622
             N+FQ L++  +D+ LDFL A QEVLCEWLS RG             + SRK L+DEI Y
Sbjct: 624  GNLFQYLIKRYQDKVLDFLYAAQEVLCEWLSVRGMTVSLSDLYLASHSCSRKILMDEIFY 683

Query: 1623 GL 1628
            GL
Sbjct: 684  GL 685


>ref|XP_006573757.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X4
            [Glycine max]
          Length = 1381

 Score =  474 bits (1219), Expect = e-131
 Identities = 262/553 (47%), Positives = 353/553 (63%), Gaps = 12/553 (2%)
 Frame = +3

Query: 9    RGNVKKADSASSHHQPKYCRYCNGKSKYGYPRMKFKVSSKDVFAKTAIIAEVHEMFVNKS 188
            + +VK A       +   C YC+      YP M+F+VSS D+F +TAII EV      K+
Sbjct: 28   KSSVKGARLIYGTKRSNDCNYCSV-----YPSMQFRVSSNDLFRRTAIIVEVKAS--KKT 80

Query: 189  SDWVLASDYWDIIPKDPSQAHEGLPANKRVLSPAQVYNILKDVCPRTLEALVNRKNSIFL 368
                + +D+W+ IP D  Q    +  N+RVLSP QV  +L DV P  +E  + RKN + L
Sbjct: 81   LGTEIPADFWNFIPCDAQQEENYV--NRRVLSPVQVNYLLNDVDPDFIEKYIPRKNLLCL 138

Query: 369  NSLLVTPNSHRVREF------GQRITVDETTKMYRKLVDFRGTPNELSARVLDRYKLSKI 530
            N   VTPN HRV E       G R++ D+ T+  +KLVDFRGT NELS+RVLD  ++SK+
Sbjct: 139  NCFPVTPNCHRVTEVPYAISSGSRLSFDDRTRSCKKLVDFRGTANELSSRVLDCLRISKL 198

Query: 531  RSEKLSN-LQKIYEKQXXXXXXXXXXGLKNIKELLLGKRTDHSFRMVVVGDPRIKVNEIG 707
              +K  N +    +++          GL+ IK+++LGKR D SFR VVVGDP ++++EIG
Sbjct: 199  NPDKTPNSIFADIQQRKIGENAFNSSGLRWIKDVVLGKRNDSSFRTVVVGDPDLELSEIG 258

Query: 708  LPTQIAENVLISDHLNIWNWGKLEQCCEFMLKEKGNFSVLRNGQRVCIWSKDMLQKGDSI 887
            +P  IAE++ +S+++N  N  KL  CCE  L EKG  +V R G  V ++ K+ LQ GD  
Sbjct: 259  IPCHIAESLQVSEYVNRQNREKLLYCCELHLLEKGKINVCRKGSIVHLYKKEDLQIGDKF 318

Query: 888  CRHLLDGDIVLINRPPSIHQHSLIALSVKILPINSVASINPLICSPLRGDFDGDCLHGYV 1067
             R L DGD VLINRPPSIHQHS+I+L+V++LPI+SV  INPL CSPLRGDFDGDCLHGY+
Sbjct: 319  YRPLADGDKVLINRPPSIHQHSMISLTVRVLPISSVVCINPLCCSPLRGDFDGDCLHGYI 378

Query: 1068 PQSVNSRVELTELVSLDKQLVNGQDGRNXXXXXXXXXXXXXXXXENGVLLNKTEIQQLQM 1247
            PQSV +R+EL ELV+LD+QL+NGQ GRN                E+GVLLN  ++QQLQM
Sbjct: 379  PQSVTARIELNELVALDRQLINGQSGRNLLSLSQDSLTAAYLLMEDGVLLNVYQMQQLQM 438

Query: 1248 FC----PCIPVLPAIIK-PTSRSSLWTGKQLFSLLLPPDFEFAYESNGVCIRKGELVSSS 1412
                    IP  PA++K P+S SSLW GKQLFS+LLP DF++++ S+GV +  GELVSSS
Sbjct: 439  LSISNKRLIP--PAVVKAPSSNSSLWNGKQLFSMLLPYDFDYSFPSDGVVVSDGELVSSS 496

Query: 1413 HGSAWLNDNSENIFQCLLRHNRDRALDFLNAGQEVLCEWLSRRGXXXXXXXXXXXXXTES 1592
              S WL D+  N+FQ L+ H + + L+FL A Q+VLCEWLS  G             + +
Sbjct: 497  EASGWLRDSDYNVFQSLVEHYQGKTLNFLYAAQKVLCEWLSMTGFSVSLSDLYLSSDSYA 556

Query: 1593 RKNLLDEIHYGLE 1631
            R+N+++EI YGL+
Sbjct: 557  RENMIEEIFYGLQ 569


>ref|XP_006573756.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X3
            [Glycine max]
          Length = 1455

 Score =  473 bits (1218), Expect = e-131
 Identities = 259/535 (48%), Positives = 347/535 (64%), Gaps = 12/535 (2%)
 Frame = +3

Query: 63   CRYCNGKSKYGYPRMKFKVSSKDVFAKTAIIAEVHEMFVNKSSDWVLASDYWDIIPKDPS 242
            C YC+      YP M+F+VSS D+F +TAII EV      K+    + +D+W+ IP D  
Sbjct: 123  CNYCSV-----YPSMQFRVSSNDLFRRTAIIVEVKAS--KKTLGTEIPADFWNFIPCDAQ 175

Query: 243  QAHEGLPANKRVLSPAQVYNILKDVCPRTLEALVNRKNSIFLNSLLVTPNSHRVREF--- 413
            Q    +  N+RVLSP QV  +L DV P  +E  + RKN + LN   VTPN HRV E    
Sbjct: 176  QEENYV--NRRVLSPVQVNYLLNDVDPDFIEKYIPRKNLLCLNCFPVTPNCHRVTEVPYA 233

Query: 414  ---GQRITVDETTKMYRKLVDFRGTPNELSARVLDRYKLSKIRSEKLSN-LQKIYEKQXX 581
               G R++ D+ T+  +KLVDFRGT NELS+RVLD  ++SK+  +K  N +    +++  
Sbjct: 234  ISSGSRLSFDDRTRSCKKLVDFRGTANELSSRVLDCLRISKLNPDKTPNSIFADIQQRKI 293

Query: 582  XXXXXXXXGLKNIKELLLGKRTDHSFRMVVVGDPRIKVNEIGLPTQIAENVLISDHLNIW 761
                    GL+ IK+++LGKR D SFR VVVGDP ++++EIG+P  IAE++ +S+++N  
Sbjct: 294  GENAFNSSGLRWIKDVVLGKRNDSSFRTVVVGDPDLELSEIGIPCHIAESLQVSEYVNRQ 353

Query: 762  NWGKLEQCCEFMLKEKGNFSVLRNGQRVCIWSKDMLQKGDSICRHLLDGDIVLINRPPSI 941
            N  KL  CCE  L EKG  +V R G  V ++ K+ LQ GD   R L DGD VLINRPPSI
Sbjct: 354  NREKLLYCCELHLLEKGKINVCRKGSIVHLYKKEDLQIGDKFYRPLADGDKVLINRPPSI 413

Query: 942  HQHSLIALSVKILPINSVASINPLICSPLRGDFDGDCLHGYVPQSVNSRVELTELVSLDK 1121
            HQHS+I+L+V++LPI+SV  INPL CSPLRGDFDGDCLHGY+PQSV +R+EL ELV+LD+
Sbjct: 414  HQHSMISLTVRVLPISSVVCINPLCCSPLRGDFDGDCLHGYIPQSVTARIELNELVALDR 473

Query: 1122 QLVNGQDGRNXXXXXXXXXXXXXXXXENGVLLNKTEIQQLQMFC----PCIPVLPAIIK- 1286
            QL+NGQ GRN                E+GVLLN  ++QQLQM        IP  PA++K 
Sbjct: 474  QLINGQSGRNLLSLSQDSLTAAYLLMEDGVLLNVYQMQQLQMLSISNKRLIP--PAVVKA 531

Query: 1287 PTSRSSLWTGKQLFSLLLPPDFEFAYESNGVCIRKGELVSSSHGSAWLNDNSENIFQCLL 1466
            P+S SSLW GKQLFS+LLP DF++++ S+GV +  GELVSSS  S WL D+  N+FQ L+
Sbjct: 532  PSSNSSLWNGKQLFSMLLPYDFDYSFPSDGVVVSDGELVSSSEASGWLRDSDYNVFQSLV 591

Query: 1467 RHNRDRALDFLNAGQEVLCEWLSRRGXXXXXXXXXXXXXTESRKNLLDEIHYGLE 1631
             H + + L+FL A Q+VLCEWLS  G             + +R+N+++EI YGL+
Sbjct: 592  EHYQGKTLNFLYAAQKVLCEWLSMTGFSVSLSDLYLSSDSYARENMIEEIFYGLQ 646


>ref|XP_006573755.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
            [Glycine max]
          Length = 1457

 Score =  473 bits (1218), Expect = e-131
 Identities = 259/535 (48%), Positives = 347/535 (64%), Gaps = 12/535 (2%)
 Frame = +3

Query: 63   CRYCNGKSKYGYPRMKFKVSSKDVFAKTAIIAEVHEMFVNKSSDWVLASDYWDIIPKDPS 242
            C YC+      YP M+F+VSS D+F +TAII EV      K+    + +D+W+ IP D  
Sbjct: 123  CNYCSV-----YPSMQFRVSSNDLFRRTAIIVEVKAS--KKTLGTEIPADFWNFIPCDAQ 175

Query: 243  QAHEGLPANKRVLSPAQVYNILKDVCPRTLEALVNRKNSIFLNSLLVTPNSHRVREF--- 413
            Q    +  N+RVLSP QV  +L DV P  +E  + RKN + LN   VTPN HRV E    
Sbjct: 176  QEENYV--NRRVLSPVQVNYLLNDVDPDFIEKYIPRKNLLCLNCFPVTPNCHRVTEVPYA 233

Query: 414  ---GQRITVDETTKMYRKLVDFRGTPNELSARVLDRYKLSKIRSEKLSN-LQKIYEKQXX 581
               G R++ D+ T+  +KLVDFRGT NELS+RVLD  ++SK+  +K  N +    +++  
Sbjct: 234  ISSGSRLSFDDRTRSCKKLVDFRGTANELSSRVLDCLRISKLNPDKTPNSIFADIQQRKI 293

Query: 582  XXXXXXXXGLKNIKELLLGKRTDHSFRMVVVGDPRIKVNEIGLPTQIAENVLISDHLNIW 761
                    GL+ IK+++LGKR D SFR VVVGDP ++++EIG+P  IAE++ +S+++N  
Sbjct: 294  GENAFNSSGLRWIKDVVLGKRNDSSFRTVVVGDPDLELSEIGIPCHIAESLQVSEYVNRQ 353

Query: 762  NWGKLEQCCEFMLKEKGNFSVLRNGQRVCIWSKDMLQKGDSICRHLLDGDIVLINRPPSI 941
            N  KL  CCE  L EKG  +V R G  V ++ K+ LQ GD   R L DGD VLINRPPSI
Sbjct: 354  NREKLLYCCELHLLEKGKINVCRKGSIVHLYKKEDLQIGDKFYRPLADGDKVLINRPPSI 413

Query: 942  HQHSLIALSVKILPINSVASINPLICSPLRGDFDGDCLHGYVPQSVNSRVELTELVSLDK 1121
            HQHS+I+L+V++LPI+SV  INPL CSPLRGDFDGDCLHGY+PQSV +R+EL ELV+LD+
Sbjct: 414  HQHSMISLTVRVLPISSVVCINPLCCSPLRGDFDGDCLHGYIPQSVTARIELNELVALDR 473

Query: 1122 QLVNGQDGRNXXXXXXXXXXXXXXXXENGVLLNKTEIQQLQMFC----PCIPVLPAIIK- 1286
            QL+NGQ GRN                E+GVLLN  ++QQLQM        IP  PA++K 
Sbjct: 474  QLINGQSGRNLLSLSQDSLTAAYLLMEDGVLLNVYQMQQLQMLSISNKRLIP--PAVVKA 531

Query: 1287 PTSRSSLWTGKQLFSLLLPPDFEFAYESNGVCIRKGELVSSSHGSAWLNDNSENIFQCLL 1466
            P+S SSLW GKQLFS+LLP DF++++ S+GV +  GELVSSS  S WL D+  N+FQ L+
Sbjct: 532  PSSNSSLWNGKQLFSMLLPYDFDYSFPSDGVVVSDGELVSSSEASGWLRDSDYNVFQSLV 591

Query: 1467 RHNRDRALDFLNAGQEVLCEWLSRRGXXXXXXXXXXXXXTESRKNLLDEIHYGLE 1631
             H + + L+FL A Q+VLCEWLS  G             + +R+N+++EI YGL+
Sbjct: 592  EHYQGKTLNFLYAAQKVLCEWLSMTGFSVSLSDLYLSSDSYARENMIEEIFYGLQ 646