BLASTX nr result

ID: Rehmannia22_contig00034027 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00034027
         (445 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006344237.1| PREDICTED: micronuclear linker histone polyp...    58   1e-06

>ref|XP_006344237.1| PREDICTED: micronuclear linker histone polyprotein-like isoform X1
           [Solanum tuberosum] gi|565354681|ref|XP_006344238.1|
           PREDICTED: micronuclear linker histone polyprotein-like
           isoform X2 [Solanum tuberosum]
          Length = 682

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 37/113 (32%), Positives = 60/113 (53%), Gaps = 4/113 (3%)
 Frame = +1

Query: 61  SERKANDEEIDRITNVVATHAARFDESVDGSVHGGDHEFTKCEAEVFGTLFSEPQFELAS 240
           +E    D + +R+  V   H  RF+ES+DGS H GD E T+C       L S PQ ELA+
Sbjct: 179 AENTGYDGDFERVNKV--GHPTRFEESLDGS-HNGDIEVTECGGVDSIILHSGPQTELAT 235

Query: 241 DCTAKVDCISEHVKLDD----NEFGSLLSIDAKSGIEMKENIDGETTCLDTSN 387
           D +  +  + EH++ +     N   S    D K+ IE+K  ++G+ + ++ S+
Sbjct: 236 DSSDVLQSVPEHMEAEANFHLNAGNSAFDDDPKTEIEVKVKLEGQDSSMEFSS 288


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