BLASTX nr result

ID: Rehmannia22_contig00033941 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00033941
         (319 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW1...    61   2e-07
gb|AAD17395.1| putative non-LTR retroelement reverse transcripta...    59   5e-07
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    57   2e-06
ref|XP_006405618.1| hypothetical protein EUTSA_v10028075mg [Eutr...    57   3e-06
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga...    57   3e-06
ref|XP_006403064.1| hypothetical protein EUTSA_v10003490mg, part...    55   7e-06
gb|AAB84340.1| putative non-LTR retroelement reverse transcripta...    55   7e-06
ref|XP_004513969.1| PREDICTED: uncharacterized protein LOC101504...    55   9e-06
gb|ACP30591.1| disease resistance protein [Brassica rapa subsp. ...    55   9e-06

>pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW15) - Arabidopsis
            thaliana retrotransposon Ta11-1 gi|976278|gb|AAA75254.1|
            reverse transcriptase [Arabidopsis thaliana]
          Length = 1333

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 25/56 (44%), Positives = 37/56 (66%)
 Frame = +2

Query: 92   FIWRAILDVLTVKGQLLKRGMKVDTICSWCGEKAETVEHVLFHCCRAQRVWKLAPV 259
            F+WR +   L V  Q+++RGM +D  C  CGE+ E++ HVLF C  A++VW L+ V
Sbjct: 1060 FLWRILSSALPVAYQIIRRGMPIDPRCQVCGEEGESINHVLFTCSLARQVWALSGV 1115


>gb|AAD17395.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1138

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 24/56 (42%), Positives = 36/56 (64%)
 Frame = +2

Query: 92   FIWRAILDVLTVKGQLLKRGMKVDTICSWCGEKAETVEHVLFHCCRAQRVWKLAPV 259
            F+WR +   L V  Q+++RGM +D  C  CG++ E+  HVLF C  A++VW L+ V
Sbjct: 834  FLWRILSAALPVADQIIRRGMSIDPRCQICGDEGESTNHVLFTCSMARQVWALSGV 889


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 24/56 (42%), Positives = 35/56 (62%)
 Frame = +2

Query: 92   FIWRAILDVLTVKGQLLKRGMKVDTICSWCGEKAETVEHVLFHCCRAQRVWKLAPV 259
            F W+AI + L V   + KRGM +D  C  CGEK ET EH+++ C  + R W ++P+
Sbjct: 1066 FSWKAIHNGLAVYTNMRKRGMNIDGACPRCGEKEETTEHLIWGCDESSRAWYISPL 1121


>ref|XP_006405618.1| hypothetical protein EUTSA_v10028075mg [Eutrema salsugineum]
           gi|557106756|gb|ESQ47071.1| hypothetical protein
           EUTSA_v10028075mg [Eutrema salsugineum]
          Length = 343

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 25/56 (44%), Positives = 38/56 (67%)
 Frame = +2

Query: 92  FIWRAILDVLTVKGQLLKRGMKVDTICSWCGEKAETVEHVLFHCCRAQRVWKLAPV 259
           F+WRA+++   V  +L++RG++VD  C  CG   ET+ HVL  C  A++VW LAP+
Sbjct: 76  FLWRAVVEAFPVGVELVRRGIQVDFACKICG-NPETITHVLRDCQLARKVWNLAPL 130


>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1362

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 23/54 (42%), Positives = 34/54 (62%)
 Frame = +2

Query: 92   FIWRAILDVLTVKGQLLKRGMKVDTICSWCGEKAETVEHVLFHCCRAQRVWKLA 253
            F+WRA    L VKG+L  R + VD  CS CG+  E++ H LF C  A+ +W+++
Sbjct: 1060 FLWRACKGSLAVKGRLFSRHISVDATCSVCGDPDESINHALFDCTFARAIWQVS 1113


>ref|XP_006403064.1| hypothetical protein EUTSA_v10003490mg, partial [Eutrema
           salsugineum] gi|557104171|gb|ESQ44517.1| hypothetical
           protein EUTSA_v10003490mg, partial [Eutrema salsugineum]
          Length = 291

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 26/56 (46%), Positives = 39/56 (69%)
 Frame = +2

Query: 92  FIWRAILDVLTVKGQLLKRGMKVDTICSWCGEKAETVEHVLFHCCRAQRVWKLAPV 259
           F+WR+ ++VL V  QL++RG++VD  C  CG   ET+ HVL  C  A+++W LAP+
Sbjct: 25  FLWRSAVEVLPVGVQLVRRGIEVDHGCKICG-NPETITHVLRDCEFARQIWNLAPL 79


>gb|AAB84340.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1094

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 22/56 (39%), Positives = 36/56 (64%)
 Frame = +2

Query: 92  FIWRAILDVLTVKGQLLKRGMKVDTICSWCGEKAETVEHVLFHCCRAQRVWKLAPV 259
           F+W+ +   + V+ +L  RG+ ++  CS C EK ET+ H+LF C  A++VW L P+
Sbjct: 787 FLWKVLKGAVAVEDRLRTRGVLIEDGCSMCPEKNETLNHILFQCPLARQVWALTPM 842


>ref|XP_004513969.1| PREDICTED: uncharacterized protein LOC101504137 [Cicer arietinum]
          Length = 200

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 18/57 (31%), Positives = 34/57 (59%)
 Frame = +2

Query: 95  IWRAILDVLTVKGQLLKRGMKVDTICSWCGEKAETVEHVLFHCCRAQRVWKLAPVGW 265
           +WRA+ D +  + +L  + ++V  +C WC  K ET+EH+L  C ++  +W+   + W
Sbjct: 137 VWRALCDCVPTRARLWNKCVQVVNMCLWCNRKVETIEHILLLCKKSSTIWQAVGLNW 193


>gb|ACP30591.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1555

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 26/72 (36%), Positives = 40/72 (55%)
 Frame = +2

Query: 92   FIWRAILDVLTVKGQLLKRGMKVDTICSWCGEKAETVEHVLFHCCRAQRVWKLAPVGWDG 271
            F+W+ +   + V  +LL+R + +D  C  CG   E++ H+LFHC  AQRVW LAP+    
Sbjct: 1263 FVWKVLKGAVPVGERLLERHIDIDPRCKRCGSN-ESITHLLFHCQFAQRVWHLAPLATAP 1321

Query: 272  IFHDKLTVKNWW 307
             F   + +   W
Sbjct: 1322 DFRGMIDLMADW 1333


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