BLASTX nr result
ID: Rehmannia22_contig00033922
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00033922
(316 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXB51974.1| Cleavage and polyadenylation specificity factor C... 79 8e-13
ref|XP_002317344.2| hypothetical protein POPTR_0011s09210g [Popu... 75 9e-12
gb|EOX96971.1| Cleavage and polyadenylation specificity factor 3... 75 1e-11
ref|XP_002523201.1| conserved hypothetical protein [Ricinus comm... 73 4e-11
ref|XP_006468290.1| PREDICTED: cleavage and polyadenylation spec... 70 2e-10
ref|XP_006448925.1| hypothetical protein CICLE_v10014454mg [Citr... 70 2e-10
ref|XP_006448924.1| hypothetical protein CICLE_v10014454mg [Citr... 70 2e-10
gb|EMJ15374.1| hypothetical protein PRUPE_ppa019072mg [Prunus pe... 69 6e-10
ref|XP_004295608.1| PREDICTED: cleavage and polyadenylation spec... 69 8e-10
ref|XP_006359103.1| PREDICTED: cleavage and polyadenylation spec... 67 2e-09
ref|XP_004158090.1| PREDICTED: uncharacterized protein LOC101225... 67 2e-09
ref|XP_004172408.1| PREDICTED: cleavage and polyadenylation spec... 66 5e-09
ref|XP_004141524.1| PREDICTED: cleavage and polyadenylation spec... 66 5e-09
ref|XP_004231555.1| PREDICTED: cleavage and polyadenylation spec... 65 9e-09
ref|XP_002281594.1| PREDICTED: cleavage and polyadenylation spec... 65 9e-09
emb|CAN61344.1| hypothetical protein VITISV_022201 [Vitis vinifera] 65 9e-09
ref|XP_002300333.2| zinc finger family protein [Populus trichoca... 61 2e-07
gb|ESW19498.1| hypothetical protein PHAVU_006G130200g [Phaseolus... 59 7e-07
ref|XP_006352991.1| PREDICTED: cleavage and polyadenylation spec... 58 1e-06
ref|XP_004233145.1| PREDICTED: cleavage and polyadenylation spec... 58 1e-06
>gb|EXB51974.1| Cleavage and polyadenylation specificity factor CPSF30 [Morus
notabilis]
Length = 710
Score = 78.6 bits (192), Expect = 8e-13
Identities = 38/52 (73%), Positives = 41/52 (78%)
Frame = -1
Query: 313 GKAQRQEDRYSAGNGNRNDESESEDEAPRRSRHGEGKKKRRSLEADSNAPSD 158
G RQED+Y AGN RNDESESEDEAPRRSRHG+GKKKRRS E D+ SD
Sbjct: 658 GAKARQEDQYGAGNSFRNDESESEDEAPRRSRHGDGKKKRRSSEEDAATGSD 709
>ref|XP_002317344.2| hypothetical protein POPTR_0011s09210g [Populus trichocarpa]
gi|550327985|gb|EEE97956.2| hypothetical protein
POPTR_0011s09210g [Populus trichocarpa]
Length = 381
Score = 75.1 bits (183), Expect = 9e-12
Identities = 35/48 (72%), Positives = 39/48 (81%)
Frame = -1
Query: 295 EDRYSAGNGNRNDESESEDEAPRRSRHGEGKKKRRSLEADSNAPSDDR 152
ED++ A N NRNDESESEDEAPRRSRHGEGKKKRR E D+N SD +
Sbjct: 333 EDQFGAVNSNRNDESESEDEAPRRSRHGEGKKKRRGSEGDANPGSDHK 380
>gb|EOX96971.1| Cleavage and polyadenylation specificity factor 30 [Theobroma
cacao]
Length = 698
Score = 74.7 bits (182), Expect = 1e-11
Identities = 36/52 (69%), Positives = 41/52 (78%)
Frame = -1
Query: 313 GKAQRQEDRYSAGNGNRNDESESEDEAPRRSRHGEGKKKRRSLEADSNAPSD 158
G+ ED+++AGN RNDESESEDEAPRRSR+GEGKKKRRSLE D SD
Sbjct: 646 GQKAHHEDQFAAGNSFRNDESESEDEAPRRSRYGEGKKKRRSLEGDDANGSD 697
>ref|XP_002523201.1| conserved hypothetical protein [Ricinus communis]
gi|223537608|gb|EEF39232.1| conserved hypothetical
protein [Ricinus communis]
Length = 702
Score = 72.8 bits (177), Expect = 4e-11
Identities = 35/52 (67%), Positives = 38/52 (73%)
Frame = -1
Query: 313 GKAQRQEDRYSAGNGNRNDESESEDEAPRRSRHGEGKKKRRSLEADSNAPSD 158
G ED++ AGN RNDESESEDEAPRRSRHGEGKKKRR E D+ SD
Sbjct: 650 GLKASHEDQFGAGNSFRNDESESEDEAPRRSRHGEGKKKRRGSEGDATPGSD 701
>ref|XP_006468290.1| PREDICTED: cleavage and polyadenylation specificity factor
CPSF30-like [Citrus sinensis]
Length = 683
Score = 70.5 bits (171), Expect = 2e-10
Identities = 36/53 (67%), Positives = 40/53 (75%)
Frame = -1
Query: 313 GKAQRQEDRYSAGNGNRNDESESEDEAPRRSRHGEGKKKRRSLEADSNAPSDD 155
G QED+Y + N RNDESESEDEAPRRSRHGEGKKKRR E D+ A SD+
Sbjct: 632 GSKANQEDQYGSRNF-RNDESESEDEAPRRSRHGEGKKKRRDSEGDAAASSDN 683
>ref|XP_006448925.1| hypothetical protein CICLE_v10014454mg [Citrus clementina]
gi|557551536|gb|ESR62165.1| hypothetical protein
CICLE_v10014454mg [Citrus clementina]
Length = 672
Score = 70.5 bits (171), Expect = 2e-10
Identities = 36/53 (67%), Positives = 40/53 (75%)
Frame = -1
Query: 313 GKAQRQEDRYSAGNGNRNDESESEDEAPRRSRHGEGKKKRRSLEADSNAPSDD 155
G QED+Y + N RNDESESEDEAPRRSRHGEGKKKRR E D+ A SD+
Sbjct: 621 GSKANQEDQYGSRNF-RNDESESEDEAPRRSRHGEGKKKRRDSEGDAAASSDN 672
>ref|XP_006448924.1| hypothetical protein CICLE_v10014454mg [Citrus clementina]
gi|557551535|gb|ESR62164.1| hypothetical protein
CICLE_v10014454mg [Citrus clementina]
Length = 701
Score = 70.5 bits (171), Expect = 2e-10
Identities = 36/53 (67%), Positives = 40/53 (75%)
Frame = -1
Query: 313 GKAQRQEDRYSAGNGNRNDESESEDEAPRRSRHGEGKKKRRSLEADSNAPSDD 155
G QED+Y + N RNDESESEDEAPRRSRHGEGKKKRR E D+ A SD+
Sbjct: 650 GSKANQEDQYGSRNF-RNDESESEDEAPRRSRHGEGKKKRRDSEGDAAASSDN 701
>gb|EMJ15374.1| hypothetical protein PRUPE_ppa019072mg [Prunus persica]
Length = 695
Score = 68.9 bits (167), Expect = 6e-10
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = -1
Query: 298 QEDRYSAGNGNRNDESESEDEAPRRSRHGEGKKKRRSLEAD 176
+ED+Y AGN +RND+SESEDEAPRRSRHGEGKKK R E D
Sbjct: 650 REDQYGAGNNSRNDDSESEDEAPRRSRHGEGKKKGRGSEGD 690
>ref|XP_004295608.1| PREDICTED: cleavage and polyadenylation specificity factor
CPSF30-like [Fragaria vesca subsp. vesca]
Length = 689
Score = 68.6 bits (166), Expect = 8e-10
Identities = 33/44 (75%), Positives = 36/44 (81%)
Frame = -1
Query: 298 QEDRYSAGNGNRNDESESEDEAPRRSRHGEGKKKRRSLEADSNA 167
QED Y AGN RND+SESEDEAPRRSRHGEGKKKRR E D+ +
Sbjct: 645 QED-YGAGNNGRNDDSESEDEAPRRSRHGEGKKKRRDSEGDATS 687
>ref|XP_006359103.1| PREDICTED: cleavage and polyadenylation specificity factor
CPSF30-like [Solanum tuberosum]
Length = 692
Score = 67.4 bits (163), Expect = 2e-09
Identities = 30/54 (55%), Positives = 44/54 (81%)
Frame = -1
Query: 313 GKAQRQEDRYSAGNGNRNDESESEDEAPRRSRHGEGKKKRRSLEADSNAPSDDR 152
GK++ ++++ AGN +N+ESESEDEAPRRSRHG+GKKKRR ++ D+ S++R
Sbjct: 638 GKSEH-DNQFGAGNSQKNEESESEDEAPRRSRHGDGKKKRRDVDEDAATGSENR 690
>ref|XP_004158090.1| PREDICTED: uncharacterized protein LOC101225604 [Cucumis sativus]
Length = 67
Score = 67.0 bits (162), Expect = 2e-09
Identities = 32/53 (60%), Positives = 39/53 (73%)
Frame = -1
Query: 316 RGKAQRQEDRYSAGNGNRNDESESEDEAPRRSRHGEGKKKRRSLEADSNAPSD 158
+G +D+Y G RN+ESESE+EAPRRSRHGEGKKKRR E D++A SD
Sbjct: 14 QGSKAYPDDQYGMGTTFRNEESESENEAPRRSRHGEGKKKRRGSEGDASAISD 66
>ref|XP_004172408.1| PREDICTED: cleavage and polyadenylation specificity factor
CPSF30-like, partial [Cucumis sativus]
Length = 331
Score = 65.9 bits (159), Expect = 5e-09
Identities = 31/53 (58%), Positives = 38/53 (71%)
Frame = -1
Query: 316 RGKAQRQEDRYSAGNGNRNDESESEDEAPRRSRHGEGKKKRRSLEADSNAPSD 158
+G +++Y G RN+ESESEDEAPRRSRHGEGKKKRR E D+ A S+
Sbjct: 278 QGSKAYSDEQYGTGTTFRNEESESEDEAPRRSRHGEGKKKRRGSEGDATAISN 330
>ref|XP_004141524.1| PREDICTED: cleavage and polyadenylation specificity factor
CPSF30-like [Cucumis sativus]
Length = 707
Score = 65.9 bits (159), Expect = 5e-09
Identities = 31/53 (58%), Positives = 38/53 (71%)
Frame = -1
Query: 316 RGKAQRQEDRYSAGNGNRNDESESEDEAPRRSRHGEGKKKRRSLEADSNAPSD 158
+G +++Y G RN+ESESEDEAPRRSRHGEGKKKRR E D+ A S+
Sbjct: 654 QGSKAYSDEQYGTGTTFRNEESESEDEAPRRSRHGEGKKKRRGSEGDATAISN 706
>ref|XP_004231555.1| PREDICTED: cleavage and polyadenylation specificity factor
CPSF30-like [Solanum lycopersicum]
Length = 689
Score = 65.1 bits (157), Expect = 9e-09
Identities = 30/54 (55%), Positives = 43/54 (79%)
Frame = -1
Query: 313 GKAQRQEDRYSAGNGNRNDESESEDEAPRRSRHGEGKKKRRSLEADSNAPSDDR 152
GK++ ++++ AGN +ND SESEDEAPRRSRHG+GKKKRR ++ D+ S++R
Sbjct: 635 GKSEH-DNQFGAGNSLKNDGSESEDEAPRRSRHGDGKKKRRDVDEDAATGSENR 687
>ref|XP_002281594.1| PREDICTED: cleavage and polyadenylation specificity factor
CPSF30-like [Vitis vinifera]
Length = 673
Score = 65.1 bits (157), Expect = 9e-09
Identities = 29/41 (70%), Positives = 34/41 (82%)
Frame = -1
Query: 316 RGKAQRQEDRYSAGNGNRNDESESEDEAPRRSRHGEGKKKR 194
+G +Q+D++ GN RNDESESEDEAPRRSRHGEGKKKR
Sbjct: 633 QGLKSQQDDQFGGGNSFRNDESESEDEAPRRSRHGEGKKKR 673
>emb|CAN61344.1| hypothetical protein VITISV_022201 [Vitis vinifera]
Length = 299
Score = 65.1 bits (157), Expect = 9e-09
Identities = 29/41 (70%), Positives = 34/41 (82%)
Frame = -1
Query: 316 RGKAQRQEDRYSAGNGNRNDESESEDEAPRRSRHGEGKKKR 194
+G +Q+D++ GN RNDESESEDEAPRRSRHGEGKKKR
Sbjct: 259 QGLKSQQDDQFGGGNSFRNDESESEDEAPRRSRHGEGKKKR 299
>ref|XP_002300333.2| zinc finger family protein [Populus trichocarpa]
gi|550349048|gb|EEE85138.2| zinc finger family protein
[Populus trichocarpa]
Length = 669
Score = 60.8 bits (146), Expect = 2e-07
Identities = 33/56 (58%), Positives = 38/56 (67%), Gaps = 3/56 (5%)
Frame = -1
Query: 316 RGKAQRQEDRYS---AGNGNRNDESESEDEAPRRSRHGEGKKKRRSLEADSNAPSD 158
R A + DR++ A N RNDESESEDEAPRRSRHGEGKKKRR D+ S+
Sbjct: 613 RAAANDRNDRHNQFGAVNSIRNDESESEDEAPRRSRHGEGKKKRRGSGDDATPGSE 668
>gb|ESW19498.1| hypothetical protein PHAVU_006G130200g [Phaseolus vulgaris]
Length = 697
Score = 58.9 bits (141), Expect = 7e-07
Identities = 28/38 (73%), Positives = 31/38 (81%)
Frame = -1
Query: 295 EDRYSAGNGNRNDESESEDEAPRRSRHGEGKKKRRSLE 182
+D + A N RND+SESEDEAPRRSRHGEGKKKRR E
Sbjct: 652 QDDHPAVNNFRNDDSESEDEAPRRSRHGEGKKKRRGPE 689
>ref|XP_006352991.1| PREDICTED: cleavage and polyadenylation specificity factor
CPSF30-like [Solanum tuberosum]
Length = 677
Score = 58.2 bits (139), Expect = 1e-06
Identities = 25/39 (64%), Positives = 32/39 (82%)
Frame = -1
Query: 274 NGNRNDESESEDEAPRRSRHGEGKKKRRSLEADSNAPSD 158
N RNDESESEDEAPRRSRHG+GKKK+ S++ D+ ++
Sbjct: 638 NSFRNDESESEDEAPRRSRHGDGKKKKNSMDGDATTGTE 676
>ref|XP_004233145.1| PREDICTED: cleavage and polyadenylation specificity factor
CPSF30-like [Solanum lycopersicum]
Length = 671
Score = 58.2 bits (139), Expect = 1e-06
Identities = 25/39 (64%), Positives = 32/39 (82%)
Frame = -1
Query: 274 NGNRNDESESEDEAPRRSRHGEGKKKRRSLEADSNAPSD 158
N RNDESESEDEAPRRSRHG+GKKK+ S++ D+ ++
Sbjct: 632 NSFRNDESESEDEAPRRSRHGDGKKKKNSMDGDATTGTE 670