BLASTX nr result
ID: Rehmannia22_contig00033668
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00033668
(488 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAK32960.1| topoisomerase I [Ophiorrhiza pseudofasciculata] 116 3e-24
dbj|BAG31377.1| topoisomerase I [Catharanthus roseus] 115 5e-24
dbj|BAG31375.1| topoisomerase I [Ophiorrhiza japonica] 114 1e-23
dbj|BAK32962.1| topoisomerase I [Ophiorrhiza trichocarpon var. g... 113 3e-23
dbj|BAK32958.1| topoisomerase I [Ophiorrhiza pedunculata] 113 3e-23
ref|XP_002266885.1| PREDICTED: DNA topoisomerase 1 [Vitis vinife... 113 3e-23
emb|CAN81282.1| hypothetical protein VITISV_037391 [Vitis vinifera] 113 3e-23
dbj|BAG31376.1| topoisomerase I [Camptotheca acuminata] 112 7e-23
emb|CAB46363.1| DNA topoisomerase I [Daucus carota] 112 7e-23
ref|XP_006474977.1| PREDICTED: DNA topoisomerase 1-like isoform ... 110 2e-22
ref|XP_006452479.1| hypothetical protein CICLE_v10007398mg [Citr... 110 2e-22
dbj|BAG31374.1| topoisomerase I [Ophiorrhiza liukiuensis] 110 2e-22
gb|EMJ02410.1| hypothetical protein PRUPE_ppa001622mg [Prunus pe... 110 3e-22
ref|XP_004149585.1| PREDICTED: DNA topoisomerase 1-like [Cucumis... 107 1e-21
ref|XP_006591998.1| PREDICTED: DNA topoisomerase 1-like [Glycine... 107 2e-21
gb|ESW03467.1| hypothetical protein PHAVU_011G016600g [Phaseolus... 107 2e-21
dbj|BAK32961.1| topoisomerase I [Ophiorrhiza ridleyana] 107 2e-21
dbj|BAK32956.1| topoisomerase I [Ophiorrhiza fucosa] 107 2e-21
emb|CBI28783.3| unnamed protein product [Vitis vinifera] 107 2e-21
ref|XP_002265386.1| PREDICTED: DNA topoisomerase 1-like [Vitis v... 107 2e-21
>dbj|BAK32960.1| topoisomerase I [Ophiorrhiza pseudofasciculata]
Length = 925
Score = 116 bits (291), Expect = 3e-24
Identities = 59/78 (75%), Positives = 62/78 (79%)
Frame = -2
Query: 487 LERKIAQTTAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKKILL 308
LERKI QT AKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEK
Sbjct: 848 LERKITQTNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNK 907
Query: 307 NLIISMKLSGDFPPSLSY 254
+L+ S D PS +
Sbjct: 908 SLLAKFAWSMDVDPSFRF 925
>dbj|BAG31377.1| topoisomerase I [Catharanthus roseus]
Length = 910
Score = 115 bits (289), Expect = 5e-24
Identities = 58/78 (74%), Positives = 63/78 (80%)
Frame = -2
Query: 487 LERKIAQTTAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKKILL 308
LE+KIAQT AKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEK
Sbjct: 833 LEKKIAQTNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNK 892
Query: 307 NLIISMKLSGDFPPSLSY 254
+L+ + D PS +
Sbjct: 893 SLLAKFTWAMDVDPSFRF 910
>dbj|BAG31375.1| topoisomerase I [Ophiorrhiza japonica]
Length = 927
Score = 114 bits (286), Expect = 1e-23
Identities = 58/78 (74%), Positives = 62/78 (79%)
Frame = -2
Query: 487 LERKIAQTTAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKKILL 308
LERK+AQ AKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEK
Sbjct: 850 LERKMAQINAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNK 909
Query: 307 NLIISMKLSGDFPPSLSY 254
+L+ S D PS +
Sbjct: 910 SLLAKFAWSMDVDPSFRF 927
>dbj|BAK32962.1| topoisomerase I [Ophiorrhiza trichocarpon var. glabra]
Length = 920
Score = 113 bits (282), Expect = 3e-23
Identities = 55/56 (98%), Positives = 55/56 (98%)
Frame = -2
Query: 487 LERKIAQTTAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEK 320
LERKIAQT AKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEK
Sbjct: 849 LERKIAQTNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEK 904
>dbj|BAK32958.1| topoisomerase I [Ophiorrhiza pedunculata]
Length = 920
Score = 113 bits (282), Expect = 3e-23
Identities = 55/56 (98%), Positives = 55/56 (98%)
Frame = -2
Query: 487 LERKIAQTTAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEK 320
LERKIAQT AKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEK
Sbjct: 849 LERKIAQTNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEK 904
>ref|XP_002266885.1| PREDICTED: DNA topoisomerase 1 [Vitis vinifera]
gi|296082698|emb|CBI21703.3| unnamed protein product
[Vitis vinifera]
Length = 857
Score = 113 bits (282), Expect = 3e-23
Identities = 56/78 (71%), Positives = 62/78 (79%)
Frame = -2
Query: 487 LERKIAQTTAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKKILL 308
LERKIAQT AKIEKMERDK+TKEDLKTVALGTSKINYLDPRI+VAWCKR EVPIEK
Sbjct: 780 LERKIAQTNAKIEKMERDKDTKEDLKTVALGTSKINYLDPRISVAWCKRQEVPIEKVFNK 839
Query: 307 NLIISMKLSGDFPPSLSY 254
+L+ + D PP +
Sbjct: 840 SLLAKFAWAMDVPPDFRF 857
>emb|CAN81282.1| hypothetical protein VITISV_037391 [Vitis vinifera]
Length = 1449
Score = 113 bits (282), Expect = 3e-23
Identities = 56/78 (71%), Positives = 62/78 (79%)
Frame = -2
Query: 487 LERKIAQTTAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKKILL 308
LERKIAQT AKIEKMERDK+TKEDLKTVALGTSKINYLDPRI+VAWCKR EVPIEK
Sbjct: 1372 LERKIAQTNAKIEKMERDKDTKEDLKTVALGTSKINYLDPRISVAWCKRQEVPIEKVFNK 1431
Query: 307 NLIISMKLSGDFPPSLSY 254
+L+ + D PP +
Sbjct: 1432 SLLAKFAWAMDVPPDFRF 1449
>dbj|BAG31376.1| topoisomerase I [Camptotheca acuminata]
Length = 894
Score = 112 bits (279), Expect = 7e-23
Identities = 56/78 (71%), Positives = 61/78 (78%)
Frame = -2
Query: 487 LERKIAQTTAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKKILL 308
LERKI QT AKIEKMERDKETKE LKT+ALGTSKI+YLDPRITVAWCKRHEVPIEK
Sbjct: 817 LERKIGQTNAKIEKMERDKETKEGLKTIALGTSKISYLDPRITVAWCKRHEVPIEKVFNK 876
Query: 307 NLIISMKLSGDFPPSLSY 254
+L+ S D PS +
Sbjct: 877 SLLAKFAWSMDVDPSFRF 894
>emb|CAB46363.1| DNA topoisomerase I [Daucus carota]
Length = 909
Score = 112 bits (279), Expect = 7e-23
Identities = 55/78 (70%), Positives = 62/78 (79%)
Frame = -2
Query: 487 LERKIAQTTAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKKILL 308
+E+KIAQT KIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKR+EVPIEK
Sbjct: 832 IEKKIAQTNVKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRYEVPIEKMFNK 891
Query: 307 NLIISMKLSGDFPPSLSY 254
+L+ + D PS +
Sbjct: 892 SLLAKFAWAMDVEPSFRF 909
>ref|XP_006474977.1| PREDICTED: DNA topoisomerase 1-like isoform X1 [Citrus sinensis]
gi|568842074|ref|XP_006474978.1| PREDICTED: DNA
topoisomerase 1-like isoform X2 [Citrus sinensis]
gi|568842076|ref|XP_006474979.1| PREDICTED: DNA
topoisomerase 1-like isoform X3 [Citrus sinensis]
gi|568842078|ref|XP_006474980.1| PREDICTED: DNA
topoisomerase 1-like isoform X4 [Citrus sinensis]
Length = 902
Score = 110 bits (275), Expect = 2e-22
Identities = 55/78 (70%), Positives = 61/78 (78%)
Frame = -2
Query: 487 LERKIAQTTAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKKILL 308
LERK+AQT AKIEKMERD +TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEK
Sbjct: 825 LERKMAQTNAKIEKMERDMKTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNK 884
Query: 307 NLIISMKLSGDFPPSLSY 254
+L+ + D P +
Sbjct: 885 SLLAKFAWAMDVDPEFRF 902
>ref|XP_006452479.1| hypothetical protein CICLE_v10007398mg [Citrus clementina]
gi|567920950|ref|XP_006452481.1| hypothetical protein
CICLE_v10007398mg [Citrus clementina]
gi|557555705|gb|ESR65719.1| hypothetical protein
CICLE_v10007398mg [Citrus clementina]
gi|557555707|gb|ESR65721.1| hypothetical protein
CICLE_v10007398mg [Citrus clementina]
Length = 902
Score = 110 bits (275), Expect = 2e-22
Identities = 55/78 (70%), Positives = 61/78 (78%)
Frame = -2
Query: 487 LERKIAQTTAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKKILL 308
LERK+AQT AKIEKMERD +TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEK
Sbjct: 825 LERKMAQTNAKIEKMERDMKTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNK 884
Query: 307 NLIISMKLSGDFPPSLSY 254
+L+ + D P +
Sbjct: 885 SLLAKFAWAMDVDPEFRF 902
>dbj|BAG31374.1| topoisomerase I [Ophiorrhiza liukiuensis]
Length = 926
Score = 110 bits (275), Expect = 2e-22
Identities = 56/78 (71%), Positives = 61/78 (78%)
Frame = -2
Query: 487 LERKIAQTTAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKKILL 308
LERKIAQT AKIEKMERDK+TKEDLK VAL TSKI+YLDPRITVAWCKRHEVPIEK
Sbjct: 849 LERKIAQTNAKIEKMERDKKTKEDLKAVALSTSKISYLDPRITVAWCKRHEVPIEKIFNK 908
Query: 307 NLIISMKLSGDFPPSLSY 254
+L+ S D PS +
Sbjct: 909 SLLAKFAWSMDVDPSFRF 926
>gb|EMJ02410.1| hypothetical protein PRUPE_ppa001622mg [Prunus persica]
Length = 790
Score = 110 bits (274), Expect = 3e-22
Identities = 56/78 (71%), Positives = 59/78 (75%)
Frame = -2
Query: 487 LERKIAQTTAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKKILL 308
LERKIAQTT KIEKME D TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEK
Sbjct: 713 LERKIAQTTVKIEKMELDMRTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNK 772
Query: 307 NLIISMKLSGDFPPSLSY 254
+L+ S D P +
Sbjct: 773 SLLAKFAWSMDVDPDFRF 790
>ref|XP_004149585.1| PREDICTED: DNA topoisomerase 1-like [Cucumis sativus]
gi|449503189|ref|XP_004161878.1| PREDICTED: DNA
topoisomerase 1-like [Cucumis sativus]
Length = 889
Score = 107 bits (268), Expect = 1e-21
Identities = 53/78 (67%), Positives = 61/78 (78%)
Frame = -2
Query: 487 LERKIAQTTAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKKILL 308
LE+KI+QT AKIEK+ERD +TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEK
Sbjct: 812 LEKKISQTNAKIEKIERDMKTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNK 871
Query: 307 NLIISMKLSGDFPPSLSY 254
+L+ + D P +
Sbjct: 872 SLLAKFAWAMDVDPDFRF 889
>ref|XP_006591998.1| PREDICTED: DNA topoisomerase 1-like [Glycine max]
Length = 512
Score = 107 bits (267), Expect = 2e-21
Identities = 53/78 (67%), Positives = 61/78 (78%)
Frame = -2
Query: 487 LERKIAQTTAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKKILL 308
LE+KI+QT AKIEKM+RD +TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEK
Sbjct: 435 LEKKISQTNAKIEKMQRDMKTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNK 494
Query: 307 NLIISMKLSGDFPPSLSY 254
+L+ + D P +
Sbjct: 495 SLLAKFCWAMDVDPDFRF 512
>gb|ESW03467.1| hypothetical protein PHAVU_011G016600g [Phaseolus vulgaris]
gi|561004474|gb|ESW03468.1| hypothetical protein
PHAVU_011G016600g [Phaseolus vulgaris]
Length = 924
Score = 107 bits (267), Expect = 2e-21
Identities = 53/78 (67%), Positives = 61/78 (78%)
Frame = -2
Query: 487 LERKIAQTTAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKKILL 308
LE+KI+QT AKIEKM+RD +TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEK
Sbjct: 847 LEKKISQTNAKIEKMQRDMKTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNK 906
Query: 307 NLIISMKLSGDFPPSLSY 254
+L+ + D P +
Sbjct: 907 SLLAKFCWAMDVDPDFRF 924
>dbj|BAK32961.1| topoisomerase I [Ophiorrhiza ridleyana]
Length = 926
Score = 107 bits (266), Expect = 2e-21
Identities = 54/78 (69%), Positives = 60/78 (76%)
Frame = -2
Query: 487 LERKIAQTTAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKKILL 308
LERKIAQT AKIEKMERDK+TKEDLK VAL TSKI+YLDPRITVAWCKR EVPIEK
Sbjct: 849 LERKIAQTNAKIEKMERDKKTKEDLKAVALSTSKISYLDPRITVAWCKRQEVPIEKMFNK 908
Query: 307 NLIISMKLSGDFPPSLSY 254
+L+ + D PS +
Sbjct: 909 SLLAKFAWAMDVDPSFRF 926
>dbj|BAK32956.1| topoisomerase I [Ophiorrhiza fucosa]
Length = 926
Score = 107 bits (266), Expect = 2e-21
Identities = 54/78 (69%), Positives = 60/78 (76%)
Frame = -2
Query: 487 LERKIAQTTAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKKILL 308
LERKIAQT AKIEKMERDK+TKEDLK VAL TSKI+YLDPRITVAWCKR EVPIEK
Sbjct: 849 LERKIAQTNAKIEKMERDKKTKEDLKAVALSTSKISYLDPRITVAWCKRQEVPIEKMFNK 908
Query: 307 NLIISMKLSGDFPPSLSY 254
+L+ + D PS +
Sbjct: 909 SLLAKFAWAMDVDPSFRF 926
>emb|CBI28783.3| unnamed protein product [Vitis vinifera]
Length = 724
Score = 107 bits (266), Expect = 2e-21
Identities = 54/78 (69%), Positives = 60/78 (76%)
Frame = -2
Query: 487 LERKIAQTTAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKKILL 308
LERKIAQT KIEKMERD +TKEDLKTVALGTSKINYLDPRI+VAWCKR EVPIEK
Sbjct: 647 LERKIAQTNTKIEKMERDMKTKEDLKTVALGTSKINYLDPRISVAWCKRQEVPIEKIFNK 706
Query: 307 NLIISMKLSGDFPPSLSY 254
+L+ + D PS +
Sbjct: 707 SLLAKFAWAMDVDPSFRF 724
>ref|XP_002265386.1| PREDICTED: DNA topoisomerase 1-like [Vitis vinifera]
Length = 883
Score = 107 bits (266), Expect = 2e-21
Identities = 54/78 (69%), Positives = 60/78 (76%)
Frame = -2
Query: 487 LERKIAQTTAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKKILL 308
LERKIAQT KIEKMERD +TKEDLKTVALGTSKINYLDPRI+VAWCKR EVPIEK
Sbjct: 806 LERKIAQTNTKIEKMERDMKTKEDLKTVALGTSKINYLDPRISVAWCKRQEVPIEKIFNK 865
Query: 307 NLIISMKLSGDFPPSLSY 254
+L+ + D PS +
Sbjct: 866 SLLAKFAWAMDVDPSFRF 883