BLASTX nr result

ID: Rehmannia22_contig00033632 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00033632
         (340 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004516202.1| PREDICTED: RNA-binding protein 5-B-like isof...    51   3e-07
ref|XP_004516204.1| PREDICTED: RNA-binding protein 5-B-like isof...    51   3e-07
ref|XP_002305898.2| hypothetical protein POPTR_0004s08000g [Popu...    57   3e-06
ref|XP_004306470.1| PREDICTED: uncharacterized protein LOC101301...    49   8e-06

>ref|XP_004516202.1| PREDICTED: RNA-binding protein 5-B-like isoform X1 [Cicer
           arietinum]
          Length = 1063

 Score = 51.2 bits (121), Expect(2) = 3e-07
 Identities = 27/53 (50%), Positives = 34/53 (64%)
 Frame = -3

Query: 338 FFEYSSKPTGRANILEWIVNQGQASSHISIMVSSDRLCTICCCVKFSMRTSCF 180
           FFEYSSKPTG +   +  +  G   SH SI V SD +CTIC  + F+ RTSC+
Sbjct: 386 FFEYSSKPTGGSGA-DGAMKSGH--SHKSITVPSDWMCTICSYINFARRTSCY 435



 Score = 28.5 bits (62), Expect(2) = 3e-07
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = -1

Query: 205 NFQ*EHHVFQCNEPRSKNAPPFYMASSN*TPRKRREAE 92
           NF      +QCNEPR+ +AP   ++ SN T   ++  E
Sbjct: 427 NFARRTSCYQCNEPRTDDAPAADISLSNSTAFGKKSLE 464


>ref|XP_004516204.1| PREDICTED: RNA-binding protein 5-B-like isoform X3 [Cicer
           arietinum] gi|502178236|ref|XP_004516205.1| PREDICTED:
           RNA-binding protein 5-B-like isoform X4 [Cicer
           arietinum]
          Length = 955

 Score = 51.2 bits (121), Expect(2) = 3e-07
 Identities = 27/53 (50%), Positives = 34/53 (64%)
 Frame = -3

Query: 338 FFEYSSKPTGRANILEWIVNQGQASSHISIMVSSDRLCTICCCVKFSMRTSCF 180
           FFEYSSKPTG +   +  +  G   SH SI V SD +CTIC  + F+ RTSC+
Sbjct: 278 FFEYSSKPTGGSGA-DGAMKSGH--SHKSITVPSDWMCTICSYINFARRTSCY 327



 Score = 28.5 bits (62), Expect(2) = 3e-07
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = -1

Query: 205 NFQ*EHHVFQCNEPRSKNAPPFYMASSN*TPRKRREAE 92
           NF      +QCNEPR+ +AP   ++ SN T   ++  E
Sbjct: 319 NFARRTSCYQCNEPRTDDAPAADISLSNSTAFGKKSLE 356


>ref|XP_002305898.2| hypothetical protein POPTR_0004s08000g [Populus trichocarpa]
           gi|550340573|gb|EEE86409.2| hypothetical protein
           POPTR_0004s08000g [Populus trichocarpa]
          Length = 948

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 29/53 (54%), Positives = 34/53 (64%)
 Frame = -3

Query: 338 FFEYSSKPTGRANILEWIVNQGQASSHISIMVSSDRLCTICCCVKFSMRTSCF 180
           FFEYSSKPTG A        Q ++  H +I V SD +CTIC CV F+ RTSCF
Sbjct: 255 FFEYSSKPTGGAG---GPFGQEKSGQHRNITVPSDWMCTICGCVNFARRTSCF 304


>ref|XP_004306470.1| PREDICTED: uncharacterized protein LOC101301612 [Fragaria vesca
           subsp. vesca]
          Length = 1062

 Score = 48.9 bits (115), Expect(2) = 8e-06
 Identities = 28/55 (50%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
 Frame = -3

Query: 338 FFEYSSKPTGRANILEWIVNQGQA--SSHISIMVSSDRLCTICCCVKFSMRTSCF 180
           FFEYSSKPTG A       N G++  ++H SI V SD +C  C  V F+ RTSCF
Sbjct: 366 FFEYSSKPTGGAGGSFGQDNAGKSGHANHKSITVPSDWMCISCGYVNFARRTSCF 420



 Score = 26.2 bits (56), Expect(2) = 8e-06
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -1

Query: 205 NFQ*EHHVFQCNEPRSKNAPPFYMASSN 122
           NF      FQCNE R+++AP   ++ SN
Sbjct: 412 NFARRTSCFQCNEARTEDAPAADISLSN 439


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