BLASTX nr result

ID: Rehmannia22_contig00033450 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00033450
         (453 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB85949.1| mikimopine synthase [Nicotiana glauca]                 77   2e-12
ref|NP_066601.1| riorf20 [Agrobacterium rhizogenes] gi|499202670...    73   4e-11
dbj|BAB85950.1| mikimopine synthase [Nicotiana glauca]                 65   7e-09

>dbj|BAB85949.1| mikimopine synthase [Nicotiana glauca]
          Length = 328

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 41/54 (75%), Positives = 44/54 (81%), Gaps = 10/54 (18%)
 Frame = -3

Query: 133 MTRSSNIEIEVAGRTIRARLMRERNP----------PVTSFALHPNVSGAGFLL 2
           M+RS+NIEIEVAGRTIRARLMRERNP          P+TSFALHPNVSGAGFLL
Sbjct: 1   MSRSTNIEIEVAGRTIRARLMRERNPQVVELVCSYLPLTSFALHPNVSGAGFLL 54


>ref|NP_066601.1| riorf20 [Agrobacterium rhizogenes] gi|499202670|ref|WP_010900210.1|
           hypothetical protein [Agrobacterium rhizogenes]
           gi|10567330|dbj|BAB16139.1| riorf20 [Agrobacterium
           rhizogenes]
          Length = 328

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 39/54 (72%), Positives = 43/54 (79%), Gaps = 10/54 (18%)
 Frame = -3

Query: 133 MTRSSNIEIEVAGRTIRARLMRERNP----------PVTSFALHPNVSGAGFLL 2
           M+RS +IEI+VAGRTIRARLMRE+NP          PVTSFALHPNVSGAGFLL
Sbjct: 1   MSRSPHIEIDVAGRTIRARLMREQNPQVVDLVYSHLPVTSFALHPNVSGAGFLL 54


>dbj|BAB85950.1| mikimopine synthase [Nicotiana glauca]
          Length = 325

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 35/51 (68%), Positives = 41/51 (80%), Gaps = 7/51 (13%)
 Frame = -3

Query: 133 MTRSSNIEIEVAGRTIRARLMRER-------NPPVTSFALHPNVSGAGFLL 2
           M+RS+NIEIEVAGRTIRARLM  +       + P+T+FALHPNVSGAGFLL
Sbjct: 1   MSRSTNIEIEVAGRTIRARLMNPQVVELVCSHLPLTNFALHPNVSGAGFLL 51


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