BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00033385
         (1181 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFB73912.1| polyprotein [Citrus sinensis]                          646   0.0  
gb|AFB73911.1| polyprotein [Citrus sinensis]                          642   0.0  
dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]                             610   e-172
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]              609   e-172
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]              608   e-171
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]              605   e-171
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]              604   e-170
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]                  602   e-170
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]     406   e-110
ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group] g...   404   e-110
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]               401   e-109
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]                401   e-109
ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707...   400   e-109
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]     398   e-108
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc...   398   e-108
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...   396   e-108
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]        396   e-108
ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group] g...   396   e-108
emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]         389   e-105
emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group]           389   e-105

>gb|AFB73912.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score =  646 bits (1666), Expect = 0.0
 Identities = 310/393 (78%), Positives = 350/393 (89%)
 Frame = +3

Query: 3    ASTSENGEVLYGEATTNAEGRKLFSDVWLLDSGATWHMTSRREWFHTYEPISGGSVFMGD 182
            ASTS++GE+LY EAT  +EGRK  SDVWL+DSGATWHMTSRREWFHTYEPISGGSV+MG+
Sbjct: 265  ASTSDDGEILYSEATIVSEGRKRLSDVWLIDSGATWHMTSRREWFHTYEPISGGSVYMGN 324

Query: 183  DHALDIAGIGTIKIKMFDGTVRTIQEVRHVKGLRKNLLSLGQLDDVGCKTRIEDGIMKIV 362
            DHAL+IAGIGTIKIKMFDGT+RTI+EVRHV GL+KNLLSLGQ+D  GCKT +E+GIMKIV
Sbjct: 325  DHALEIAGIGTIKIKMFDGTIRTIEEVRHVNGLKKNLLSLGQMDSHGCKTHVENGIMKIV 384

Query: 363  KGAIVVMKAEKLAANLYMLKGETMQGGEAYVAVAGSAEESTIMWHHKLGHMSEQGLKILS 542
            KGA+V+MKAEK+ ANL+MLKGET+Q  EA   VA + EEST+MWH KLGHMSEQGLKILS
Sbjct: 385  KGALVLMKAEKICANLFMLKGETLQ--EADACVASNGEESTMMWHLKLGHMSEQGLKILS 442

Query: 543  EQKLLPGLTKVSLPFCEHCVTSKQHKLKFGRSTSKSKGILELIHSDVWQAPLSSLGGARY 722
            E+KL PGL  VSLPFCEHCVTSKQH+LKF RS ++SK IL+LIHSDVW++P  S+GGA+Y
Sbjct: 443  ERKLPPGLKSVSLPFCEHCVTSKQHRLKFSRSIARSKCILDLIHSDVWESPDISMGGAKY 502

Query: 723  FVSFIDDYSRRCWVYPIKRKADVFSVFKVYKAQIELESGKKIKCLRTDNGGEYTSDEFES 902
             V+FIDDYSRRCWVYPIK+K+DVF VFK YKA +ELESGKKIKCLRTDNGGEYT  EF +
Sbjct: 503  MVTFIDDYSRRCWVYPIKKKSDVFPVFKEYKAWVELESGKKIKCLRTDNGGEYTDSEFLA 562

Query: 903  FCQQEGIKRQFTVAYTPQQNGVAERMNRTLLERTRAMLRTASLPKTFWAEAVKTACYVIN 1082
            FC+QEGI+RQFTVAYTPQQNGVAERMNRTL ER RAMLRTA LP +FWAEA KTACY++N
Sbjct: 563  FCKQEGIQRQFTVAYTPQQNGVAERMNRTLTERIRAMLRTAGLPNSFWAEAAKTACYIVN 622

Query: 1083 RSPSTAIDLKTPMEMWTGKPADYSRLHTFGSPV 1181
            RSPSTAI LKT MEMWTGKPADYS LH FG PV
Sbjct: 623  RSPSTAIGLKTAMEMWTGKPADYSYLHAFGCPV 655


>gb|AFB73911.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score =  642 bits (1656), Expect = 0.0
 Identities = 309/393 (78%), Positives = 349/393 (88%)
 Frame = +3

Query: 3    ASTSENGEVLYGEATTNAEGRKLFSDVWLLDSGATWHMTSRREWFHTYEPISGGSVFMGD 182
            ASTS++GE+LY EATT +EGRK  SDVWL+DSGATWHMTSRREWFHTYEPISGGSV+MG+
Sbjct: 265  ASTSDDGEILYSEATTVSEGRKRLSDVWLIDSGATWHMTSRREWFHTYEPISGGSVYMGN 324

Query: 183  DHALDIAGIGTIKIKMFDGTVRTIQEVRHVKGLRKNLLSLGQLDDVGCKTRIEDGIMKIV 362
            DHAL+IAGIGTIKIKMFDGT+RTI EVRHV GL+KNLLSLGQ+D  G KT +E+GIMKIV
Sbjct: 325  DHALEIAGIGTIKIKMFDGTIRTIGEVRHVNGLKKNLLSLGQMDSHGYKTHVENGIMKIV 384

Query: 363  KGAIVVMKAEKLAANLYMLKGETMQGGEAYVAVAGSAEESTIMWHHKLGHMSEQGLKILS 542
            KGA+V+MK EK+ ANL+MLKGET+Q  EA   VA + EEST+MWH KLGHMSEQGLKILS
Sbjct: 385  KGALVLMKVEKIGANLFMLKGETLQ--EADACVASNGEESTMMWHLKLGHMSEQGLKILS 442

Query: 543  EQKLLPGLTKVSLPFCEHCVTSKQHKLKFGRSTSKSKGILELIHSDVWQAPLSSLGGARY 722
            E+KLLPGL  VSLPFCEHCVTSKQH+LKF RS ++SK IL+LIHSDVW++P  S+GGA+Y
Sbjct: 443  ERKLLPGLKSVSLPFCEHCVTSKQHRLKFSRSIARSKCILDLIHSDVWESPDISMGGAKY 502

Query: 723  FVSFIDDYSRRCWVYPIKRKADVFSVFKVYKAQIELESGKKIKCLRTDNGGEYTSDEFES 902
             V+FIDDYSRRCWVYPIK+K+DVF VFK YKA +ELESGKKIKCLRTDNGGEYT  EF +
Sbjct: 503  MVTFIDDYSRRCWVYPIKKKSDVFPVFKEYKAWVELESGKKIKCLRTDNGGEYTDGEFLA 562

Query: 903  FCQQEGIKRQFTVAYTPQQNGVAERMNRTLLERTRAMLRTASLPKTFWAEAVKTACYVIN 1082
            FC+QEGI+RQFTVAYTPQQNGVAERMNRTL ER RAMLRTA LP +FWAEA KTACY++N
Sbjct: 563  FCKQEGIQRQFTVAYTPQQNGVAERMNRTLTERIRAMLRTAGLPNSFWAEAAKTACYIVN 622

Query: 1083 RSPSTAIDLKTPMEMWTGKPADYSRLHTFGSPV 1181
            RSPSTAI LKT MEMWTGKPADYS LH FG P+
Sbjct: 623  RSPSTAIGLKTAMEMWTGKPADYSYLHAFGCPM 655


>dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]
          Length = 1298

 Score =  610 bits (1573), Expect = e-172
 Identities = 287/393 (73%), Positives = 342/393 (87%)
 Frame = +3

Query: 3    ASTSENGEVLYGEATTNAEGRKLFSDVWLLDSGATWHMTSRREWFHTYEPISGGSVFMGD 182
            ASTS++G  L  EA+   EGRK F+D+WL+DSGAT+HMTSR+EWFH YEPISGGSV+  D
Sbjct: 255  ASTSDDGSALCCEASIAREGRKRFADIWLIDSGATYHMTSRKEWFHHYEPISGGSVYSCD 314

Query: 183  DHALDIAGIGTIKIKMFDGTVRTIQEVRHVKGLRKNLLSLGQLDDVGCKTRIEDGIMKIV 362
            DHAL+I GIGTIK+KM+DGTV+T+Q+VRHVKGL+KNLLS G LD+   +   + G+MKI 
Sbjct: 315  DHALEIIGIGTIKLKMYDGTVQTVQDVRHVKGLKKNLLSYGILDNSATQIETQKGVMKIF 374

Query: 363  KGAIVVMKAEKLAANLYMLKGETMQGGEAYVAVAGSAEESTIMWHHKLGHMSEQGLKILS 542
            +GA+VVMK EK+AANLYMLKGET+Q  EA  +VA  + +ST++WH KLGHMS+QG+KIL 
Sbjct: 375  QGALVVMKGEKIAANLYMLKGETLQEAEA--SVAACSPDSTLLWHQKLGHMSDQGMKILV 432

Query: 543  EQKLLPGLTKVSLPFCEHCVTSKQHKLKFGRSTSKSKGILELIHSDVWQAPLSSLGGARY 722
            EQKL+PGLTKVSLP CEHC+TSKQH+LKF  S S+ K +LEL+HSDVWQAP+ SLGGA+Y
Sbjct: 433  EQKLIPGLTKVSLPLCEHCITSKQHRLKFSTSNSRGKVVLELVHSDVWQAPVPSLGGAKY 492

Query: 723  FVSFIDDYSRRCWVYPIKRKADVFSVFKVYKAQIELESGKKIKCLRTDNGGEYTSDEFES 902
            FVSFIDDYSRRCWVYPIK+K+DVF+ FK +KA++EL+SGKKIKC RTDNGGEYTS+EF+ 
Sbjct: 493  FVSFIDDYSRRCWVYPIKKKSDVFATFKAFKARVELDSGKKIKCFRTDNGGEYTSEEFDD 552

Query: 903  FCQQEGIKRQFTVAYTPQQNGVAERMNRTLLERTRAMLRTASLPKTFWAEAVKTACYVIN 1082
            FC++EGIKRQFTVAYTPQQNGVAERMNRTLLERTRAMLR A L K+FWAEAV TACY++N
Sbjct: 553  FCKKEGIKRQFTVAYTPQQNGVAERMNRTLLERTRAMLRAAGLEKSFWAEAVNTACYLVN 612

Query: 1083 RSPSTAIDLKTPMEMWTGKPADYSRLHTFGSPV 1181
            R+PSTAI+LKTPMEMWTGKP DYS LH FGS V
Sbjct: 613  RAPSTAIELKTPMEMWTGKPVDYSNLHIFGSIV 645


>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  609 bits (1570), Expect = e-172
 Identities = 289/393 (73%), Positives = 341/393 (86%)
 Frame = +3

Query: 3    ASTSENGEVLYGEATTNAEGRKLFSDVWLLDSGATWHMTSRREWFHTYEPISGGSVFMGD 182
            ASTS++GE+LY EA T++EG +  +DVW++DSGATWHMT  R+WF++YEPIS GSV+MG+
Sbjct: 264  ASTSDDGEILYSEAATSSEGERQLNDVWIMDSGATWHMTPHRDWFYSYEPISEGSVYMGN 323

Query: 183  DHALDIAGIGTIKIKMFDGTVRTIQEVRHVKGLRKNLLSLGQLDDVGCKTRIEDGIMKIV 362
            DHAL+IAG+GTI++KM DGTVR IQ VRHVKGL+KNLLS+GQLDD+GCK   E GI+K+V
Sbjct: 324  DHALEIAGVGTIRLKMHDGTVRKIQGVRHVKGLKKNLLSVGQLDDLGCKIHSESGILKVV 383

Query: 363  KGAIVVMKAEKLAANLYMLKGETMQGGEAYVAVAGSAEESTIMWHHKLGHMSEQGLKILS 542
            KG +VVMKAEK+ +NLYML G+T+Q  +A VA A S EE+T+MWH +LGHMSE+GLK+L 
Sbjct: 384  KGNLVVMKAEKITSNLYMLLGDTLQEADASVAAA-SQEETTMMWHQRLGHMSERGLKVLV 442

Query: 543  EQKLLPGLTKVSLPFCEHCVTSKQHKLKFGRSTSKSKGILELIHSDVWQAPLSSLGGARY 722
            E+ LL GL  V+LPFCEHCV SKQH+LKF R T++SK IL+LIHSDVW++P  SLGGARY
Sbjct: 443  ERNLLHGLKTVNLPFCEHCVISKQHRLKFARVTTRSKHILDLIHSDVWESPKLSLGGARY 502

Query: 723  FVSFIDDYSRRCWVYPIKRKADVFSVFKVYKAQIELESGKKIKCLRTDNGGEYTSDEFES 902
            FVSFIDDYSRR WVYPIK+K+DVF VFK +KAQIELE+GKKIKCLRTDNGGEY   EF +
Sbjct: 503  FVSFIDDYSRRLWVYPIKKKSDVFPVFKAFKAQIELETGKKIKCLRTDNGGEYVDGEFLA 562

Query: 903  FCQQEGIKRQFTVAYTPQQNGVAERMNRTLLERTRAMLRTASLPKTFWAEAVKTACYVIN 1082
            FC+QEGI RQFTVA+TPQQNGVAERMNRTLLERTRAML+TA + K+FWAEAVKTACYVIN
Sbjct: 563  FCKQEGIVRQFTVAHTPQQNGVAERMNRTLLERTRAMLKTAEMAKSFWAEAVKTACYVIN 622

Query: 1083 RSPSTAIDLKTPMEMWTGKPADYSRLHTFGSPV 1181
            RSPST IDLKTPMEMW GKP DYS LH FG PV
Sbjct: 623  RSPSTTIDLKTPMEMWKGKPVDYSSLHVFGCPV 655


>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  608 bits (1567), Expect = e-171
 Identities = 289/393 (73%), Positives = 341/393 (86%)
 Frame = +3

Query: 3    ASTSENGEVLYGEATTNAEGRKLFSDVWLLDSGATWHMTSRREWFHTYEPISGGSVFMGD 182
            ASTS++GE+LY EA T+++G +  +DVW++DSGATWHMT  R+WF +YEPIS GSV+MG+
Sbjct: 264  ASTSDDGEILYSEAATSSKGERRLNDVWIMDSGATWHMTPHRDWFFSYEPISEGSVYMGN 323

Query: 183  DHALDIAGIGTIKIKMFDGTVRTIQEVRHVKGLRKNLLSLGQLDDVGCKTRIEDGIMKIV 362
            DHAL+IAG+GTI++KM DGTVR IQ VRHVKGL+KNLLS+GQLDD+GCK   E GI+K+V
Sbjct: 324  DHALEIAGVGTIRLKMHDGTVRKIQGVRHVKGLKKNLLSVGQLDDLGCKIHTESGILKVV 383

Query: 363  KGAIVVMKAEKLAANLYMLKGETMQGGEAYVAVAGSAEESTIMWHHKLGHMSEQGLKILS 542
            KG +VVMKAEK+ +NLYML G+T+Q  +A VA A S EE+T+MWH +LGHMSE+GLK+L 
Sbjct: 384  KGNLVVMKAEKITSNLYMLLGDTLQEADASVAAA-SQEETTMMWHQRLGHMSERGLKVLV 442

Query: 543  EQKLLPGLTKVSLPFCEHCVTSKQHKLKFGRSTSKSKGILELIHSDVWQAPLSSLGGARY 722
            E+ LL GL  V+LPFCEHCV SKQH+LKF R T++SK IL+LIHSDVW++P  SLGGARY
Sbjct: 443  ERNLLHGLKTVNLPFCEHCVISKQHRLKFARVTTRSKHILDLIHSDVWESPELSLGGARY 502

Query: 723  FVSFIDDYSRRCWVYPIKRKADVFSVFKVYKAQIELESGKKIKCLRTDNGGEYTSDEFES 902
            FVSFIDDYSRR WVYPIK+K+DVF VFK +KAQIELE+GKKIKCLRTDNGGEY   EF +
Sbjct: 503  FVSFIDDYSRRLWVYPIKKKSDVFPVFKAFKAQIELETGKKIKCLRTDNGGEYVDGEFLA 562

Query: 903  FCQQEGIKRQFTVAYTPQQNGVAERMNRTLLERTRAMLRTASLPKTFWAEAVKTACYVIN 1082
            FC+QEGI RQFTVA+TPQQNGVAERMNRTLLERTRAML+TA + K+FWAEAVKTACYVIN
Sbjct: 563  FCKQEGIVRQFTVAHTPQQNGVAERMNRTLLERTRAMLKTAGMAKSFWAEAVKTACYVIN 622

Query: 1083 RSPSTAIDLKTPMEMWTGKPADYSRLHTFGSPV 1181
            RSPSTAIDLKTPMEMW GKP DYS LH FG PV
Sbjct: 623  RSPSTAIDLKTPMEMWKGKPVDYSSLHVFGCPV 655


>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  605 bits (1561), Expect = e-171
 Identities = 288/393 (73%), Positives = 341/393 (86%)
 Frame = +3

Query: 3    ASTSENGEVLYGEATTNAEGRKLFSDVWLLDSGATWHMTSRREWFHTYEPISGGSVFMGD 182
            ASTS++GE+LY EA T+++G +  +DVW++DSGATWHMT  R+WF +YEPIS GSV+MG+
Sbjct: 264  ASTSDDGEILYSEAATSSKGERRLNDVWIMDSGATWHMTPHRDWFFSYEPISEGSVYMGN 323

Query: 183  DHALDIAGIGTIKIKMFDGTVRTIQEVRHVKGLRKNLLSLGQLDDVGCKTRIEDGIMKIV 362
            DHAL+IAG+GTI++KM DGTVR IQ VRHVKGL+KNLLS+GQLDD+GCK   E GI+K+V
Sbjct: 324  DHALEIAGVGTIRLKMHDGTVRKIQGVRHVKGLKKNLLSVGQLDDLGCKIHTESGILKVV 383

Query: 363  KGAIVVMKAEKLAANLYMLKGETMQGGEAYVAVAGSAEESTIMWHHKLGHMSEQGLKILS 542
            KG +VVMKAEK+ +NLYML G+T+Q  +A VA A S EE+T+MWH +LGHMSE+GLK+L+
Sbjct: 384  KGNLVVMKAEKITSNLYMLLGDTLQEADASVA-ASSQEETTMMWHQRLGHMSERGLKVLA 442

Query: 543  EQKLLPGLTKVSLPFCEHCVTSKQHKLKFGRSTSKSKGILELIHSDVWQAPLSSLGGARY 722
            E+ LL GL  V+LPFCEHCV SKQH+LKF R T++SK IL+LIHSDVW++P  SLGGARY
Sbjct: 443  ERNLLHGLKAVNLPFCEHCVISKQHRLKFARVTTRSKHILDLIHSDVWESPEISLGGARY 502

Query: 723  FVSFIDDYSRRCWVYPIKRKADVFSVFKVYKAQIELESGKKIKCLRTDNGGEYTSDEFES 902
            FVSFIDDYSRR WVYPIK+K+DVF VFK +KAQIELE+ KKIKCLRTDNGGEY   EF +
Sbjct: 503  FVSFIDDYSRRLWVYPIKKKSDVFPVFKAFKAQIELETRKKIKCLRTDNGGEYIDGEFLA 562

Query: 903  FCQQEGIKRQFTVAYTPQQNGVAERMNRTLLERTRAMLRTASLPKTFWAEAVKTACYVIN 1082
            FC+QEGI RQFTVA+TPQQNGVAERMNRTLLERTRAML+TA + K+FWAEAVKTACYVIN
Sbjct: 563  FCKQEGIVRQFTVAHTPQQNGVAERMNRTLLERTRAMLKTAGMAKSFWAEAVKTACYVIN 622

Query: 1083 RSPSTAIDLKTPMEMWTGKPADYSRLHTFGSPV 1181
            RSPSTAIDLKTPMEMW GKP DYS LH FG PV
Sbjct: 623  RSPSTAIDLKTPMEMWKGKPVDYSSLHVFGCPV 655


>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  604 bits (1558), Expect = e-170
 Identities = 287/393 (73%), Positives = 340/393 (86%)
 Frame = +3

Query: 3    ASTSENGEVLYGEATTNAEGRKLFSDVWLLDSGATWHMTSRREWFHTYEPISGGSVFMGD 182
            ASTS++GE+LY EA T+++G +  +DVW++DSGATWHMT  R+WF++YEPIS GSV+MG+
Sbjct: 264  ASTSDDGEILYSEAATSSKGERRLNDVWIMDSGATWHMTPHRDWFYSYEPISEGSVYMGN 323

Query: 183  DHALDIAGIGTIKIKMFDGTVRTIQEVRHVKGLRKNLLSLGQLDDVGCKTRIEDGIMKIV 362
            DHAL+IAG+GTI++KM DGTVR IQ VRHVKGL+KNLLS+GQLDD+GCK   E GI+K+V
Sbjct: 324  DHALEIAGVGTIRLKMHDGTVRKIQGVRHVKGLKKNLLSVGQLDDLGCKIHTESGILKVV 383

Query: 363  KGAIVVMKAEKLAANLYMLKGETMQGGEAYVAVAGSAEESTIMWHHKLGHMSEQGLKILS 542
            KG +VVMKAEK+ +NLYML G+T+Q  +A VA A S EE+T+MWH +LGHMSE+GLK+L 
Sbjct: 384  KGNLVVMKAEKITSNLYMLLGDTLQEADASVAAA-SQEETTMMWHQRLGHMSERGLKVLV 442

Query: 543  EQKLLPGLTKVSLPFCEHCVTSKQHKLKFGRSTSKSKGILELIHSDVWQAPLSSLGGARY 722
            E+ LL GL  V+LPFCEHCV SKQH+LKF R T++SK IL+LIHSDVW++P  SLGGARY
Sbjct: 443  ERNLLHGLKTVNLPFCEHCVMSKQHRLKFARVTTRSKHILDLIHSDVWESPEISLGGARY 502

Query: 723  FVSFIDDYSRRCWVYPIKRKADVFSVFKVYKAQIELESGKKIKCLRTDNGGEYTSDEFES 902
            FVSFIDDYSRR WVYPIK+K+DVF VFK +KAQIELE+ KKIKCLRTDNGGEY   EF +
Sbjct: 503  FVSFIDDYSRRLWVYPIKKKSDVFPVFKAFKAQIELETEKKIKCLRTDNGGEYVDGEFLA 562

Query: 903  FCQQEGIKRQFTVAYTPQQNGVAERMNRTLLERTRAMLRTASLPKTFWAEAVKTACYVIN 1082
            FC+QEGI RQFTVA+TPQQNGVAERMNRTLLERTRAML+TA + K+FWAEA KTACYVIN
Sbjct: 563  FCKQEGIVRQFTVAHTPQQNGVAERMNRTLLERTRAMLKTAGMAKSFWAEAAKTACYVIN 622

Query: 1083 RSPSTAIDLKTPMEMWTGKPADYSRLHTFGSPV 1181
            RSPSTAIDLKTPMEMW GKP DYS LH FG PV
Sbjct: 623  RSPSTAIDLKTPMEMWKGKPVDYSSLHVFGCPV 655


>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
          Length = 1305

 Score =  602 bits (1552), Expect = e-170
 Identities = 285/393 (72%), Positives = 343/393 (87%)
 Frame = +3

Query: 3    ASTSENGEVLYGEATTNAEGRKLFSDVWLLDSGATWHMTSRREWFHTYEPISGGSVFMGD 182
            ASTS++GEVLY EA  + +G+   +DVW++DSGATWHMT RR+WF TYEP+S G+VFMG+
Sbjct: 264  ASTSDDGEVLYSEAAVSTKGKNRLTDVWIVDSGATWHMTPRRDWFCTYEPVSEGNVFMGN 323

Query: 183  DHALDIAGIGTIKIKMFDGTVRTIQEVRHVKGLRKNLLSLGQLDDVGCKTRIEDGIMKIV 362
            DHAL+I GIGT+KIKM+DGT+RT+QEVRHVK L KNLLS+GQLDD+G K  I+ GI+K+V
Sbjct: 324  DHALEIVGIGTVKIKMYDGTIRTLQEVRHVKELAKNLLSVGQLDDLGYKYDIQGGILKVV 383

Query: 363  KGAIVVMKAEKLAANLYMLKGETMQGGEAYVAVAGSAEESTIMWHHKLGHMSEQGLKILS 542
            KG++VVMKA+K+AANLYML G+T Q  +A VAV GS EE+T+MWH +LGHMSE+GLK+L+
Sbjct: 384  KGSLVVMKAKKVAANLYMLLGDTWQMADASVAV-GSQEETTMMWHRRLGHMSERGLKVLA 442

Query: 543  EQKLLPGLTKVSLPFCEHCVTSKQHKLKFGRSTSKSKGILELIHSDVWQAPLSSLGGARY 722
            E+ L+PGL  VSLPFCEHCV SKQH+LKF +ST++SK IL+LIHSDVW++P  S+GGA+Y
Sbjct: 443  ERNLIPGLKSVSLPFCEHCVISKQHRLKFAKSTARSKHILDLIHSDVWESPEVSIGGAKY 502

Query: 723  FVSFIDDYSRRCWVYPIKRKADVFSVFKVYKAQIELESGKKIKCLRTDNGGEYTSDEFES 902
            FVSFIDDYSRR WVYPIK+K+ V+SVFK +KAQ+ELE+GK+IKCLRTDNGGEYT  +F +
Sbjct: 503  FVSFIDDYSRRLWVYPIKKKSGVYSVFKEFKAQVELETGKRIKCLRTDNGGEYTDGDFLA 562

Query: 903  FCQQEGIKRQFTVAYTPQQNGVAERMNRTLLERTRAMLRTASLPKTFWAEAVKTACYVIN 1082
            FC+QEGI RQFTVA+TPQQNGVAERMNRTLLERTRAML+TA L K+FWAEA KTACYVIN
Sbjct: 563  FCKQEGITRQFTVAHTPQQNGVAERMNRTLLERTRAMLKTAGLAKSFWAEAAKTACYVIN 622

Query: 1083 RSPSTAIDLKTPMEMWTGKPADYSRLHTFGSPV 1181
            RSPSTAI LKTPMEMW GKP DYS L  FG PV
Sbjct: 623  RSPSTAIGLKTPMEMWKGKPGDYSSLRVFGCPV 655


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score =  406 bits (1043), Expect = e-110
 Identities = 196/367 (53%), Positives = 263/367 (71%), Gaps = 1/367 (0%)
 Frame = +3

Query: 75   SDVWLLDSGATWHMTSRREWFHTYEPISGGSVFMGDDHALDIAGIGTIKIKMFDGTVRTI 254
            SD W+LD+  T+HM   R+WF TYE + GG+V MGDD   ++AGIGT++IKMFDG +RT+
Sbjct: 206  SDQWILDTACTYHMCPNRDWFATYEAVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTL 265

Query: 255  QEVRHVKGLRKNLLSLGQLDDVGCKTRIEDGIMKIVKGAIVVMKAEKLAANLYMLKGETM 434
             +VRH+  L+++L+SL  LD  G K    DGI+K+ KG++VVMKA+   ANLY L+G T+
Sbjct: 266  LDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKYANLYHLRGTTI 325

Query: 435  QGGEAYVAVAGSAEESTIMWHHKLGHMSEQGLKILSEQKLLPGLTKVSLPFCEHCVTSKQ 614
             G  A V+ + S  ++T +WH +LGHMSE GL  LS++ LL G +   L FCEHC+  K 
Sbjct: 326  LGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLDGQSIGKLKFCEHCIFGKH 385

Query: 615  HKLKFGRSTSKSKGILELIHSDVW-QAPLSSLGGARYFVSFIDDYSRRCWVYPIKRKADV 791
             ++KF  ST  ++GIL+ +HSD+W  A  +S GGARY ++ +DDYSR+ W Y +K K   
Sbjct: 386  KRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYMMTIVDDYSRKVWPYFLKHKYQA 445

Query: 792  FSVFKVYKAQIELESGKKIKCLRTDNGGEYTSDEFESFCQQEGIKRQFTVAYTPQQNGVA 971
            F VFK +K  +E ++ +K+K LRTDNG E  S  F+S+C+ EGI R +TV +TPQQNGVA
Sbjct: 446  FDVFKEWKTMVERQTERKVKILRTDNGMELCSKIFKSYCKSEGIVRHYTVPHTPQQNGVA 505

Query: 972  ERMNRTLLERTRAMLRTASLPKTFWAEAVKTACYVINRSPSTAIDLKTPMEMWTGKPADY 1151
            ERMNRT++ + R ML  ASLPK FWAEAV TACY+INRSPS AID KTP+E+W+G PA+Y
Sbjct: 506  ERMNRTIISKARCMLSNASLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSGSPANY 565

Query: 1152 SRLHTFG 1172
            S L  FG
Sbjct: 566  SDLRVFG 572


>ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group]
            gi|255672802|dbj|BAH90873.1| Os01g0116166 [Oryza sativa
            Japonica Group]
          Length = 778

 Score =  404 bits (1037), Expect = e-110
 Identities = 192/367 (52%), Positives = 262/367 (71%), Gaps = 1/367 (0%)
 Frame = +3

Query: 75   SDVWLLDSGATWHMTSRREWFHTYEPISGGSVFMGDDHALDIAGIGTIKIKMFDGTVRTI 254
            SD W+LD+  T+HM   R+WF TYE + GG+V MGDD   ++AGIGT++IKMFDG +RT+
Sbjct: 263  SDQWILDTACTYHMCPNRDWFATYETVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTL 322

Query: 255  QEVRHVKGLRKNLLSLGQLDDVGCKTRIEDGIMKIVKGAIVVMKAEKLAANLYMLKGETM 434
             +VRH+  L+++L+S   LD  G K    DGI+K+ KG++VVMKA+  +ANLY L+G T+
Sbjct: 323  SDVRHIPNLKRSLISFCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTI 382

Query: 435  QGGEAYVAVAGSAEESTIMWHHKLGHMSEQGLKILSEQKLLPGLTKVSLPFCEHCVTSKQ 614
             G  A V+ + S  ++T +WH +LGHMSE GL  LS++ LL G +   L FCEHC+  K 
Sbjct: 383  LGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLYGQSIGKLKFCEHCIFGKH 442

Query: 615  HKLKFGRSTSKSKGILELIHSDVW-QAPLSSLGGARYFVSFIDDYSRRCWVYPIKRKADV 791
             ++KF  ST  ++GIL+ +HSD+W  A  +S GGARY ++ +DDYSR+ W Y +K K   
Sbjct: 443  KRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYIMTIVDDYSRKVWPYFLKHKYQA 502

Query: 792  FSVFKVYKAQIELESGKKIKCLRTDNGGEYTSDEFESFCQQEGIKRQFTVAYTPQQNGVA 971
            F VFK +K  +E ++ +K+K LRTDNG E+ S  F+S+C+ EGI R +T+ +TPQQNGVA
Sbjct: 503  FDVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVRHYTIPHTPQQNGVA 562

Query: 972  ERMNRTLLERTRAMLRTASLPKTFWAEAVKTACYVINRSPSTAIDLKTPMEMWTGKPADY 1151
            ERMNRT++ + R ML  A LPK FWAEAV TACY+INRSPS AID KTP+E+W+G P +Y
Sbjct: 563  ERMNRTIISKARCMLSNAGLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSGSPVNY 622

Query: 1152 SRLHTFG 1172
            S L  FG
Sbjct: 623  SDLRVFG 629


>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
          Length = 1037

 Score =  401 bits (1030), Expect = e-109
 Identities = 192/367 (52%), Positives = 263/367 (71%), Gaps = 1/367 (0%)
 Frame = +3

Query: 75   SDVWLLDSGATWHMTSRREWFHTYEPISGGSVFMGDDHALDIAGIGTIKIKMFDGTVRTI 254
            SD W+LD+  T+HM   R+WF TYE + GG+V MGDD   ++AGIGT++IKMFDG +RT+
Sbjct: 114  SDQWILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTL 173

Query: 255  QEVRHVKGLRKNLLSLGQLDDVGCKTRIEDGIMKIVKGAIVVMKAEKLAANLYMLKGETM 434
             +VRH+  L+++L+SL  LD  G K    DGI+K+ KG++VVMKA+  +ANLY L+G T+
Sbjct: 174  SDVRHIPNLKRSLISLCTLDCKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLQGTTI 233

Query: 435  QGGEAYVAVAGSAEESTIMWHHKLGHMSEQGLKILSEQKLLPGLTKVSLPFCEHCVTSKQ 614
             G  A V+ + S  ++T +WH +LGHMSE GL  LS + LL G +   L FCEHC+  K 
Sbjct: 234  LGNVATVSDSLSNSDATNLWHMRLGHMSEIGLAELSMRGLLDGQSIGKLKFCEHCIFGKH 293

Query: 615  HKLKFGRSTSKSKGILELIHSDVW-QAPLSSLGGARYFVSFIDDYSRRCWVYPIKRKADV 791
             ++KF  ST  ++GIL+ +HSD+W  A  +S GGARY ++ ++DYSR+ W Y +K K   
Sbjct: 294  KRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYMMTIVNDYSRKVWPYFLKHKYQA 353

Query: 792  FSVFKVYKAQIELESGKKIKCLRTDNGGEYTSDEFESFCQQEGIKRQFTVAYTPQQNGVA 971
            F+VFK +K  +E ++ +K+K LRTDNG E+ S  F+S+C+ EGI R +TV +TPQQNGVA
Sbjct: 354  FNVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIMRHYTVPHTPQQNGVA 413

Query: 972  ERMNRTLLERTRAMLRTASLPKTFWAEAVKTACYVINRSPSTAIDLKTPMEMWTGKPADY 1151
            ERMNRT++ + R ML  A LPK FWAEAV TACY+INRSP  AID KTP+++W+G PA+Y
Sbjct: 414  ERMNRTIISKARCMLSNAGLPKQFWAEAVSTACYLINRSPGYAIDKKTPIKVWSGSPANY 473

Query: 1152 SRLHTFG 1172
            S L  FG
Sbjct: 474  SDLKVFG 480


>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
          Length = 1205

 Score =  401 bits (1030), Expect = e-109
 Identities = 192/367 (52%), Positives = 263/367 (71%), Gaps = 1/367 (0%)
 Frame = +3

Query: 75   SDVWLLDSGATWHMTSRREWFHTYEPISGGSVFMGDDHALDIAGIGTIKIKMFDGTVRTI 254
            SD W+LD+  T+HM   R+WF TYE + GG+V MGDD   ++AGIGT++IKMFDG +RT+
Sbjct: 282  SDQWILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTL 341

Query: 255  QEVRHVKGLRKNLLSLGQLDDVGCKTRIEDGIMKIVKGAIVVMKAEKLAANLYMLKGETM 434
             +VRH+  L+++L+SL  LD  G K    DGI+K+ KG++VVMKA+  +ANLY L+G T+
Sbjct: 342  SDVRHIPNLKRSLISLCTLDCKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLQGTTI 401

Query: 435  QGGEAYVAVAGSAEESTIMWHHKLGHMSEQGLKILSEQKLLPGLTKVSLPFCEHCVTSKQ 614
             G  A V+ + S  ++T +WH +LGHMSE GL  LS + LL G +   L FCEHC+  K 
Sbjct: 402  LGNVATVSDSLSNSDATNLWHMRLGHMSEIGLAELSMRGLLDGQSIGKLKFCEHCIFGKH 461

Query: 615  HKLKFGRSTSKSKGILELIHSDVW-QAPLSSLGGARYFVSFIDDYSRRCWVYPIKRKADV 791
             ++KF  ST  ++GIL+ +HSD+W  A  +S GGARY ++ ++DYSR+ W Y +K K   
Sbjct: 462  KRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYMMTIVNDYSRKVWPYFLKHKYQA 521

Query: 792  FSVFKVYKAQIELESGKKIKCLRTDNGGEYTSDEFESFCQQEGIKRQFTVAYTPQQNGVA 971
            F+VFK +K  +E ++ +K+K LRTDNG E+ S  F+S+C+ EGI R +TV +TPQQNGVA
Sbjct: 522  FNVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIMRHYTVPHTPQQNGVA 581

Query: 972  ERMNRTLLERTRAMLRTASLPKTFWAEAVKTACYVINRSPSTAIDLKTPMEMWTGKPADY 1151
            ERMNRT++ + R ML  A LPK FWAEAV TACY+INRSP  AID KTP+++W+G PA+Y
Sbjct: 582  ERMNRTIISKARCMLSNAGLPKQFWAEAVSTACYLINRSPGYAIDKKTPIKVWSGSPANY 641

Query: 1152 SRLHTFG 1172
            S L  FG
Sbjct: 642  SDLKVFG 648


>ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
          Length = 1773

 Score =  400 bits (1029), Expect = e-109
 Identities = 195/367 (53%), Positives = 260/367 (70%), Gaps = 1/367 (0%)
 Frame = +3

Query: 75   SDVWLLDSGATWHMTSRREWFHTYEPISGGSVFMGDDHALDIAGIGTIKIKMFDGTVRTI 254
            SD WLLD+G T+HM   R+WF TYEP+ GG+V MGD+    +AG+GTI+IKMFDG +RT+
Sbjct: 239  SDEWLLDTGCTYHMCPNRDWFTTYEPVQGGNVLMGDNTPCKVAGVGTIQIKMFDGCIRTL 298

Query: 255  QEVRHVKGLRKNLLSLGQLDDVGCKTRIEDGIMKIVKGAIVVMKAEKLAANLYMLKGETM 434
             +VRH+  L++NL+SL  LD  G +    DGI+K+ KG++VVMKA+   A+LY L+G T+
Sbjct: 299  SDVRHIPSLKRNLISLSTLDRKGYRYSGGDGILKVTKGSLVVMKADIKNADLYHLQGTTI 358

Query: 435  QGGEAYVAVAGSAEESTIMWHHKLGHMSEQGLKILSEQKLLPGLTKVSLPFCEHCVTSKQ 614
             G  A  AV  S   S + WH +LGHMSE GL  LS++ LL G     L FCEHC+  K 
Sbjct: 359  VGNVA--AVTDSLSNSDL-WHMRLGHMSEIGLAELSKRGLLDGQNIGKLKFCEHCIFGKH 415

Query: 615  HKLKFGRSTSKSKGILELIHSDVW-QAPLSSLGGARYFVSFIDDYSRRCWVYPIKRKADV 791
             ++KF  ST  ++GIL+ +HSD+W  A   S GGARY ++ +DDYSR+ W Y +K K + 
Sbjct: 416  KRVKFTTSTHTTEGILDYVHSDLWGPARKRSFGGARYMMTIVDDYSRKVWPYFLKHKFEA 475

Query: 792  FSVFKVYKAQIELESGKKIKCLRTDNGGEYTSDEFESFCQQEGIKRQFTVAYTPQQNGVA 971
            F VFK +K  +E ++ +K+K LRTDNG E+ S +F+S+C+ EGI R +TV++TPQQNGV 
Sbjct: 476  FLVFKEWKTMVERQTERKVKVLRTDNGMEFCSRQFKSYCRSEGIVRHYTVSHTPQQNGVV 535

Query: 972  ERMNRTLLERTRAMLRTASLPKTFWAEAVKTACYVINRSPSTAIDLKTPMEMWTGKPADY 1151
            ERMNRT++ + R ML  A LP+ FWAEA  TACY+INRSPS AID KTP+EMW+G PA+Y
Sbjct: 536  ERMNRTIISKARCMLSNAGLPRRFWAEAASTACYLINRSPSYAIDKKTPIEMWSGSPANY 595

Query: 1152 SRLHTFG 1172
            S L  FG
Sbjct: 596  SDLKVFG 602


>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1280

 Score =  398 bits (1023), Expect = e-108
 Identities = 191/367 (52%), Positives = 260/367 (70%), Gaps = 1/367 (0%)
 Frame = +3

Query: 75   SDVWLLDSGATWHMTSRREWFHTYEPISGGSVFMGDDHALDIAGIGTIKIKMFDGTVRTI 254
            SD W+LD+  T+HM   R+WF TYE + GG+V MGDD   ++AGIGT++IKMFDG +RT+
Sbjct: 332  SDQWILDTAWTYHMCPNRDWFATYEALQGGTVLMGDDTPCEVAGIGTVQIKMFDGYIRTL 391

Query: 255  QEVRHVKGLRKNLLSLGQLDDVGCKTRIEDGIMKIVKGAIVVMKAEKLAANLYMLKGETM 434
             +VRH+  L+++L+SL  LD  G K    DGI+K+ KG++VVMKA+  +ANLY L+G T+
Sbjct: 392  SDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTI 451

Query: 435  QGGEAYVAVAGSAEESTIMWHHKLGHMSEQGLKILSEQKLLPGLTKVSLPFCEHCVTSKQ 614
             G  A V+ + S  ++T +WH +LGHMSE GL  LS+++LL G +   L FCEHC+  K 
Sbjct: 452  LGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRELLDGQSIGKLKFCEHCIFGKH 511

Query: 615  HKLKFGRSTSKSKGILELIHSDVW-QAPLSSLGGARYFVSFIDDYSRRCWVYPIKRKADV 791
             ++KF  ST  ++GIL+ +HSD+W  A  +S GGARY ++ +DDYSR+ W Y +K K   
Sbjct: 512  KRVKFNTSTHTTEGILDYVHSDLWGPACKTSFGGARYMMTIVDDYSRKVWPYFLKHKYQA 571

Query: 792  FSVFKVYKAQIELESGKKIKCLRTDNGGEYTSDEFESFCQQEGIKRQFTVAYTPQQNGVA 971
            F VFK +K  +E ++ KK+K LRTDNG E+ S  F+S+C+ EGI   +TV +TPQQNGVA
Sbjct: 572  FDVFKEWKTMVERQTEKKVKILRTDNGMEFCSKIFKSYCKSEGIVHHYTVPHTPQQNGVA 631

Query: 972  ERMNRTLLERTRAMLRTASLPKTFWAEAVKTACYVINRSPSTAIDLKTPMEMWTGKPADY 1151
            ERMN  ++ + R ML  A LPK FWAEAV T CY+INRSPS A D KTP+E+W+G PA+Y
Sbjct: 632  ERMNMAIISKARCMLSNADLPKQFWAEAVSTTCYLINRSPSYATDKKTPIEVWSGSPANY 691

Query: 1152 SRLHTFG 1172
            S L  FG
Sbjct: 692  SDLRVFG 698


>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1312

 Score =  398 bits (1023), Expect = e-108
 Identities = 191/367 (52%), Positives = 260/367 (70%), Gaps = 1/367 (0%)
 Frame = +3

Query: 75   SDVWLLDSGATWHMTSRREWFHTYEPISGGSVFMGDDHALDIAGIGTIKIKMFDGTVRTI 254
            SD W+LD+  T+HM   R+WF TYE + GG+V MGDD   ++AGIGT++IKMFDG +RT+
Sbjct: 332  SDQWILDTAWTYHMCPNRDWFATYEALQGGTVLMGDDTPCEVAGIGTVQIKMFDGYIRTL 391

Query: 255  QEVRHVKGLRKNLLSLGQLDDVGCKTRIEDGIMKIVKGAIVVMKAEKLAANLYMLKGETM 434
             +VRH+  L+++L+SL  LD  G K    DGI+K+ KG++VVMKA+  +ANLY L+G T+
Sbjct: 392  SDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTI 451

Query: 435  QGGEAYVAVAGSAEESTIMWHHKLGHMSEQGLKILSEQKLLPGLTKVSLPFCEHCVTSKQ 614
             G  A V+ + S  ++T +WH +LGHMSE GL  LS+++LL G +   L FCEHC+  K 
Sbjct: 452  LGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRELLDGQSIGKLKFCEHCIFGKH 511

Query: 615  HKLKFGRSTSKSKGILELIHSDVW-QAPLSSLGGARYFVSFIDDYSRRCWVYPIKRKADV 791
             ++KF  ST  ++GIL+ +HSD+W  A  +S GGARY ++ +DDYSR+ W Y +K K   
Sbjct: 512  KRVKFNTSTHTTEGILDYVHSDLWGPACKTSFGGARYMMTIVDDYSRKVWPYFLKHKYQA 571

Query: 792  FSVFKVYKAQIELESGKKIKCLRTDNGGEYTSDEFESFCQQEGIKRQFTVAYTPQQNGVA 971
            F VFK +K  +E ++ KK+K LRTDNG E+ S  F+S+C+ EGI   +TV +TPQQNGVA
Sbjct: 572  FDVFKEWKTMVERQTEKKVKILRTDNGMEFCSKIFKSYCKSEGIVHHYTVPHTPQQNGVA 631

Query: 972  ERMNRTLLERTRAMLRTASLPKTFWAEAVKTACYVINRSPSTAIDLKTPMEMWTGKPADY 1151
            ERMN  ++ + R ML  A LPK FWAEAV T CY+INRSPS A D KTP+E+W+G PA+Y
Sbjct: 632  ERMNMAIISKARCMLSNADLPKQFWAEAVSTTCYLINRSPSYATDKKTPIEVWSGSPANY 691

Query: 1152 SRLHTFG 1172
            S L  FG
Sbjct: 692  SDLRVFG 698


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77548751|gb|ABA91548.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 2340

 Score =  396 bits (1018), Expect = e-108
 Identities = 189/367 (51%), Positives = 261/367 (71%), Gaps = 1/367 (0%)
 Frame = +3

Query: 75   SDVWLLDSGATWHMTSRREWFHTYEPISGGSVFMGDDHALDIAGIGTIKIKMFDGTVRTI 254
            SD W+L++   +HM   R+WF TYE +  G+V MGDD   ++AGIGT++IKMFDG +RT+
Sbjct: 504  SDQWILNTACIYHMCPNRDWFATYEAVQVGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTL 563

Query: 255  QEVRHVKGLRKNLLSLGQLDDVGCKTRIEDGIMKIVKGAIVVMKAEKLAANLYMLKGETM 434
             +VRH+  L+++L+SL  LD  G K    DGI+K+ KG++VVMKA+  +ANLY L+G T+
Sbjct: 564  SDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTI 623

Query: 435  QGGEAYVAVAGSAEESTIMWHHKLGHMSEQGLKILSEQKLLPGLTKVSLPFCEHCVTSKQ 614
             G  A V+ + S  ++T +WH +LGHM+E GL  LS++ LL G +   L FCEHC+  K 
Sbjct: 624  LGNVAAVSDSLSNSDATNLWHMRLGHMTEIGLAELSKRGLLDGQSIGKLKFCEHCIFGKH 683

Query: 615  HKLKFGRSTSKSKGILELIHSDVW-QAPLSSLGGARYFVSFIDDYSRRCWVYPIKRKADV 791
             ++KF  ST  ++GIL+ +HSD+W  A  +S GG RY ++ +DDYSR+ W Y +K K   
Sbjct: 684  KRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGTRYMMTIVDDYSRKVWPYFLKHKYQA 743

Query: 792  FSVFKVYKAQIELESGKKIKCLRTDNGGEYTSDEFESFCQQEGIKRQFTVAYTPQQNGVA 971
            F VFK +K  +E ++ +K+K LRTDNG E+ S  F+S+C+ EGI R +TV +TPQQNGVA
Sbjct: 744  FDVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVRHYTVPHTPQQNGVA 803

Query: 972  ERMNRTLLERTRAMLRTASLPKTFWAEAVKTACYVINRSPSTAIDLKTPMEMWTGKPADY 1151
            ERMNRT++ + R +L  A LPK FWAEAV TACY+INRSPS AID KTP+E+W+G PA+Y
Sbjct: 804  ERMNRTIISKARCLLSNAGLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSGSPANY 863

Query: 1152 SRLHTFG 1172
            S L  FG
Sbjct: 864  SDLRVFG 870


>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
          Length = 1181

 Score =  396 bits (1018), Expect = e-108
 Identities = 192/367 (52%), Positives = 262/367 (71%), Gaps = 1/367 (0%)
 Frame = +3

Query: 75   SDVWLLDSGATWHMTSRREWFHTYEPISGGSVFMGDDHALDIAGIGTIKIKMFDGTVRTI 254
            SD W+LD+  T+HM   R+WF TYE + GG+V MGDD   ++AGIGT++IKMFDG +RT+
Sbjct: 297  SDQWILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTL 356

Query: 255  QEVRHVKGLRKNLLSLGQLDDVGCKTRIEDGIMKIVKGAIVVMKAEKLAANLYMLKGETM 434
             +VRH+  L+++L+SL  LD  G K    DGI+K+ KG++VVMKA   +ANLY L+G T+
Sbjct: 357  SDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKASIKSANLYHLQGTTI 416

Query: 435  QGGEAYVAVAGSAEESTIMWHHKLGHMSEQGLKILSEQKLLPGLTKVSLPFCEHCVTSKQ 614
             G  A V+ + S  ++T +WH +LGHMSE GL  LS++ LL G +   L FCEHC+  K 
Sbjct: 417  LGNVATVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLDGQSISKLKFCEHCIFGKH 476

Query: 615  HKLKFGRSTSKSKGILELIHSDVW-QAPLSSLGGARYFVSFIDDYSRRCWVYPIKRKADV 791
             ++KF  ST  ++GIL+ +HSD+W  A  +S GGARY ++ +DDYSR+ W Y +K K   
Sbjct: 477  KRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYMMTIVDDYSRKVWPYFLKHKYQA 536

Query: 792  FSVFKVYKAQIELESGKKIKCLRTDNGGEYTSDEFESFCQQEGIKRQFTVAYTPQQNGVA 971
            F+VFK +K  +E ++ +K+K LRTDNG E+ S  F+S+C+ EGI R +TV +TPQQNGVA
Sbjct: 537  FNVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVRHYTVPHTPQQNGVA 596

Query: 972  ERMNRTLLERTRAMLRTASLPKTFWAEAVKTACYVINRSPSTAIDLKTPMEMWTGKPADY 1151
            ERMNR ++ + R ML  A LPK FWAEAV TACY+INRSPS A + KTP+E+W+G PA+Y
Sbjct: 597  ERMNRIIISKARCMLSNAGLPKQFWAEAVSTACYLINRSPSYA-NKKTPIEVWSGSPANY 655

Query: 1152 SRLHTFG 1172
            S L  FG
Sbjct: 656  SDLKVFG 662


>ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group]
            gi|255679807|dbj|BAF27642.2| Os11g0157000 [Oryza sativa
            Japonica Group]
          Length = 1601

 Score =  396 bits (1018), Expect = e-108
 Identities = 189/367 (51%), Positives = 261/367 (71%), Gaps = 1/367 (0%)
 Frame = +3

Query: 75   SDVWLLDSGATWHMTSRREWFHTYEPISGGSVFMGDDHALDIAGIGTIKIKMFDGTVRTI 254
            SD W+L++   +HM   R+WF TYE +  G+V MGDD   ++AGIGT++IKMFDG +RT+
Sbjct: 297  SDQWILNTACIYHMCPNRDWFATYEAVQVGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTL 356

Query: 255  QEVRHVKGLRKNLLSLGQLDDVGCKTRIEDGIMKIVKGAIVVMKAEKLAANLYMLKGETM 434
             +VRH+  L+++L+SL  LD  G K    DGI+K+ KG++VVMKA+  +ANLY L+G T+
Sbjct: 357  SDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTI 416

Query: 435  QGGEAYVAVAGSAEESTIMWHHKLGHMSEQGLKILSEQKLLPGLTKVSLPFCEHCVTSKQ 614
             G  A V+ + S  ++T +WH +LGHM+E GL  LS++ LL G +   L FCEHC+  K 
Sbjct: 417  LGNVAAVSDSLSNSDATNLWHMRLGHMTEIGLAELSKRGLLDGQSIGKLKFCEHCIFGKH 476

Query: 615  HKLKFGRSTSKSKGILELIHSDVW-QAPLSSLGGARYFVSFIDDYSRRCWVYPIKRKADV 791
             ++KF  ST  ++GIL+ +HSD+W  A  +S GG RY ++ +DDYSR+ W Y +K K   
Sbjct: 477  KRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGTRYMMTIVDDYSRKVWPYFLKHKYQA 536

Query: 792  FSVFKVYKAQIELESGKKIKCLRTDNGGEYTSDEFESFCQQEGIKRQFTVAYTPQQNGVA 971
            F VFK +K  +E ++ +K+K LRTDNG E+ S  F+S+C+ EGI R +TV +TPQQNGVA
Sbjct: 537  FDVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVRHYTVPHTPQQNGVA 596

Query: 972  ERMNRTLLERTRAMLRTASLPKTFWAEAVKTACYVINRSPSTAIDLKTPMEMWTGKPADY 1151
            ERMNRT++ + R +L  A LPK FWAEAV TACY+INRSPS AID KTP+E+W+G PA+Y
Sbjct: 597  ERMNRTIISKARCLLSNAGLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSGSPANY 656

Query: 1152 SRLHTFG 1172
            S L  FG
Sbjct: 657  SDLRVFG 663


>emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]
          Length = 944

 Score =  389 bits (998), Expect = e-105
 Identities = 189/367 (51%), Positives = 257/367 (70%), Gaps = 1/367 (0%)
 Frame = +3

Query: 75   SDVWLLDSGATWHMTSRREWFHTYEPISGGSVFMGDDHALDIAGIGTIKIKMFDGTVRTI 254
            SD W+LD+  T+HM   R+WF TYE + GG+V MGDD   ++AGIG ++IKMFDG + T+
Sbjct: 129  SDQWILDTACTYHMCPNRDWFATYEAVQGGTVLMGDDTPCEVAGIGIVQIKMFDGCISTL 188

Query: 255  QEVRHVKGLRKNLLSLGQLDDVGCKTRIEDGIMKIVKGAIVVMKAEKLAANLYMLKGETM 434
             +VRH+  L+++L+SL  LD  G K    DGI+K+ KG++VVMKA+  +ANLY L+G T+
Sbjct: 189  SDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTI 248

Query: 435  QGGEAYVAVAGSAEESTIMWHHKLGHMSEQGLKILSEQKLLPGLTKVSLPFCEHCVTSKQ 614
             G  A V+ + S  ++T +WH +LGHMSE GL  LS++ LL G +   L FCEHC+  K 
Sbjct: 249  LGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLDGQSIGKLKFCEHCIFGKH 308

Query: 615  HKLKFGRSTSKSKGILELIHSDVW-QAPLSSLGGARYFVSFIDDYSRRCWVYPIKRKADV 791
             ++KF  ST  ++GIL+ +HSD+W  A  +S GGARY ++ +DDYSR+ W Y +K K   
Sbjct: 309  KRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYIMTIVDDYSRKVWPYFLKHKYQA 368

Query: 792  FSVFKVYKAQIELESGKKIKCLRTDNGGEYTSDEFESFCQQEGIKRQFTVAYTPQQNGVA 971
            F VFK +K  +E ++ +K+K LRTDNG E+ S  F+S+C+ EGI R     YTPQQNGVA
Sbjct: 369  FDVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVRH----YTPQQNGVA 424

Query: 972  ERMNRTLLERTRAMLRTASLPKTFWAEAVKTACYVINRSPSTAIDLKTPMEMWTGKPADY 1151
            ERMNRT++ + R ML  A LPK FWA AV T CY+INRSPS AID KTP+++W+G PA+Y
Sbjct: 425  ERMNRTIISKARCMLSNAGLPKQFWAAAVSTTCYLINRSPSYAIDKKTPIKVWSGFPANY 484

Query: 1152 SRLHTFG 1172
            S L  FG
Sbjct: 485  SDLRVFG 491


>emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group]
          Length = 944

 Score =  389 bits (998), Expect = e-105
 Identities = 189/367 (51%), Positives = 257/367 (70%), Gaps = 1/367 (0%)
 Frame = +3

Query: 75   SDVWLLDSGATWHMTSRREWFHTYEPISGGSVFMGDDHALDIAGIGTIKIKMFDGTVRTI 254
            SD W+LD+  T+HM   R+WF TYE + GG+V MGDD   ++AGIG ++IKMFDG + T+
Sbjct: 129  SDQWILDTACTYHMCPNRDWFATYEAVQGGTVLMGDDTPCEVAGIGIVQIKMFDGCISTL 188

Query: 255  QEVRHVKGLRKNLLSLGQLDDVGCKTRIEDGIMKIVKGAIVVMKAEKLAANLYMLKGETM 434
             +VRH+  L+++L+SL  LD  G K    DGI+K+ KG++VVMKA+  +ANLY L+G T+
Sbjct: 189  SDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTI 248

Query: 435  QGGEAYVAVAGSAEESTIMWHHKLGHMSEQGLKILSEQKLLPGLTKVSLPFCEHCVTSKQ 614
             G  A V+ + S  ++T +WH +LGHMSE GL  LS++ LL G +   L FCEHC+  K 
Sbjct: 249  LGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLDGQSIGKLKFCEHCIFGKH 308

Query: 615  HKLKFGRSTSKSKGILELIHSDVW-QAPLSSLGGARYFVSFIDDYSRRCWVYPIKRKADV 791
             ++KF  ST  ++GIL+ +HSD+W  A  +S GGARY ++ +DDYSR+ W Y +K K   
Sbjct: 309  KRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYIMTIVDDYSRKVWPYFLKHKYQA 368

Query: 792  FSVFKVYKAQIELESGKKIKCLRTDNGGEYTSDEFESFCQQEGIKRQFTVAYTPQQNGVA 971
            F VFK +K  +E ++ +K+K LRTDNG E+ S  F+S+C+ EGI R     YTPQQNGVA
Sbjct: 369  FDVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVRH----YTPQQNGVA 424

Query: 972  ERMNRTLLERTRAMLRTASLPKTFWAEAVKTACYVINRSPSTAIDLKTPMEMWTGKPADY 1151
            ERMNRT++ + R ML  A LPK FWA AV T CY+INRSPS AID KTP+++W+G PA+Y
Sbjct: 425  ERMNRTIISKARCMLSNAGLPKQFWAAAVSTTCYLINRSPSYAIDKKTPIKVWSGFPANY 484

Query: 1152 SRLHTFG 1172
            S L  FG
Sbjct: 485  SDLRVFG 491