BLASTX nr result

ID: Rehmannia22_contig00033315 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00033315
         (485 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006475043.1| PREDICTED: DNA mismatch repair protein MSH5-...    55   7e-06
ref|XP_006452401.1| hypothetical protein CICLE_v10010304mg [Citr...    55   7e-06

>ref|XP_006475043.1| PREDICTED: DNA mismatch repair protein MSH5-like [Citrus sinensis]
          Length = 811

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 30/54 (55%), Positives = 35/54 (64%), Gaps = 10/54 (18%)
 Frame = -2

Query: 133 SSSHYSLMTISFIPLFTK----------SSDWTAFLKSICSLLHINKIFEVGIS 2
           +S H +L  +  IP   K          +SDWTAFLKSICSLLH+NKIFEVGIS
Sbjct: 266 ASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGIS 319


>ref|XP_006452401.1| hypothetical protein CICLE_v10010304mg [Citrus clementina]
           gi|557555627|gb|ESR65641.1| hypothetical protein
           CICLE_v10010304mg [Citrus clementina]
          Length = 799

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 30/54 (55%), Positives = 35/54 (64%), Gaps = 10/54 (18%)
 Frame = -2

Query: 133 SSSHYSLMTISFIPLFTK----------SSDWTAFLKSICSLLHINKIFEVGIS 2
           +S H +L  +  IP   K          +SDWTAFLKSICSLLH+NKIFEVGIS
Sbjct: 254 ASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGIS 307


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