BLASTX nr result
ID: Rehmannia22_contig00032943
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00032943
(327 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN67199.1| hypothetical protein VITISV_017217 [Vitis vinifera] 183 2e-44
gb|ADJ18449.1| gag/pol protein [Bryonia dioica] 176 4e-42
gb|EXB30863.1| Retrovirus-related Pol polyprotein from transposo... 174 1e-41
ref|XP_004150929.1| PREDICTED: uncharacterized protein LOC101213... 160 2e-37
gb|ABG22008.1| retrotransposon protein, putative, Ty1-copia subc... 143 3e-32
gb|EXC27156.1| hypothetical protein L484_000603 [Morus notabilis] 142 5e-32
dbj|BAA22288.1| polyprotein [Oryza australiensis] 137 1e-30
ref|XP_004978922.1| PREDICTED: uncharacterized protein LOC101776... 137 2e-30
gb|EMS50467.1| Retrovirus-related Pol polyprotein from transposo... 135 7e-30
emb|CBI20118.3| unnamed protein product [Vitis vinifera] 135 7e-30
gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa... 134 1e-29
emb|CAN81793.1| hypothetical protein VITISV_020571 [Vitis vinifera] 134 1e-29
emb|CAN78069.1| hypothetical protein VITISV_032701 [Vitis vinifera] 134 1e-29
gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subc... 134 1e-29
gb|AAD17357.1| contains similarity to retrovirus-related polypro... 133 3e-29
gb|AAM74249.1|AC074355_11 Putative retroelement [Oryza sativa Ja... 133 3e-29
gb|AAP52343.2| retrotransposon protein, putative, Ty1-copia subc... 133 3e-29
gb|EMS67284.1| Spastin [Triticum urartu] 132 4e-29
emb|CAE02960.2| OSJNBb0050N09.11 [Oryza sativa Japonica Group] 132 4e-29
emb|CAE04259.3| OSJNBa0089N06.20 [Oryza sativa Japonica Group] 132 4e-29
>emb|CAN67199.1| hypothetical protein VITISV_017217 [Vitis vinifera]
Length = 961
Score = 183 bits (465), Expect = 2e-44
Identities = 88/104 (84%), Positives = 92/104 (88%)
Frame = +1
Query: 1 PQQNGVAERRNRTLLDMVRSMMSYATLPDSFWGYALQTAVYILNVVPSKSIQKTPLELWN 180
PQQNGVAERRNRTLLDM+RSMMSY +L SFWGYALQT VYILN+VPSKSI TPLELWN
Sbjct: 404 PQQNGVAERRNRTLLDMMRSMMSYFSLLTSFWGYALQTVVYILNMVPSKSIPNTPLELWN 463
Query: 181 GSKVSLRHFRIWGCPAHVLKGKTGKLHPRSEVYLFVGYPKGTRG 312
G K SLRH RIWGCPAHVLKGKTGKL RSEV +FVGYPKGTRG
Sbjct: 464 GRKPSLRHIRIWGCPAHVLKGKTGKLESRSEVCMFVGYPKGTRG 507
>gb|ADJ18449.1| gag/pol protein [Bryonia dioica]
Length = 1292
Score = 176 bits (445), Expect = 4e-42
Identities = 83/108 (76%), Positives = 93/108 (86%)
Frame = +1
Query: 1 PQQNGVAERRNRTLLDMVRSMMSYATLPDSFWGYALQTAVYILNVVPSKSIQKTPLELWN 180
PQQNGV+ERRNRTLLDMVRSMMSYA LPDSFWGYAL+TA++ILN VPSKS+ +TP ELW
Sbjct: 599 PQQNGVSERRNRTLLDMVRSMMSYAQLPDSFWGYALETAIHILNNVPSKSVLETPYELWK 658
Query: 181 GSKVSLRHFRIWGCPAHVLKGKTGKLHPRSEVYLFVGYPKGTRGGLFY 324
G K SLR+FRIWGCPAHVL KL PRS++ LFVGYPK +RGGLFY
Sbjct: 659 GRKSSLRYFRIWGCPAHVLVQNPKKLEPRSKLCLFVGYPKESRGGLFY 706
>gb|EXB30863.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Morus
notabilis]
Length = 403
Score = 174 bits (440), Expect = 1e-41
Identities = 81/108 (75%), Positives = 92/108 (85%)
Frame = +1
Query: 1 PQQNGVAERRNRTLLDMVRSMMSYATLPDSFWGYALQTAVYILNVVPSKSIQKTPLELWN 180
PQQNG+AERRN+TLLD++RSM+SY++L SFW YAL+TA YILN VPSKSI KTPLELW
Sbjct: 181 PQQNGIAERRNQTLLDIIRSMLSYSSLHTSFWDYALRTAAYILNRVPSKSIPKTPLELWC 240
Query: 181 GSKVSLRHFRIWGCPAHVLKGKTGKLHPRSEVYLFVGYPKGTRGGLFY 324
G K SLRH RIWGCPAHVLKGKT KL P+SEV +FVGYP GT+G FY
Sbjct: 241 GQKPSLRHVRIWGCPAHVLKGKTEKLEPKSEVCMFVGYPDGTKGDFFY 288
>ref|XP_004150929.1| PREDICTED: uncharacterized protein LOC101213227 [Cucumis sativus]
Length = 513
Score = 160 bits (405), Expect = 2e-37
Identities = 76/109 (69%), Positives = 88/109 (80%)
Frame = +1
Query: 1 PQQNGVAERRNRTLLDMVRSMMSYATLPDSFWGYALQTAVYILNVVPSKSIQKTPLELWN 180
PQQNGV+ERRN+TLLDMVRSMMS++ + DSFWGYAL+TA YIL VPSKS+ +TP EL
Sbjct: 370 PQQNGVSERRNQTLLDMVRSMMSFSQMSDSFWGYALETAAYILKNVPSKSVSETPYELEK 429
Query: 181 GSKVSLRHFRIWGCPAHVLKGKTGKLHPRSEVYLFVGYPKGTRGGLFYD 327
G K SLRHFRIWGCPAHVL KL RS++ F+GYPK +RGGLFYD
Sbjct: 430 GRKGSLRHFRIWGCPAHVLVQNPKKLEHRSKLCFFIGYPKESRGGLFYD 478
>gb|ABG22008.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 932
Score = 143 bits (360), Expect = 3e-32
Identities = 67/109 (61%), Positives = 82/109 (75%)
Frame = +1
Query: 1 PQQNGVAERRNRTLLDMVRSMMSYATLPDSFWGYALQTAVYILNVVPSKSIQKTPLELWN 180
PQ NGV+ERRNRTLLDMVRSMMS LP SFWGYAL+TA + LN VPSKS+ KTP E+W
Sbjct: 265 PQWNGVSERRNRTLLDMVRSMMSQTDLPLSFWGYALETAAFTLNRVPSKSLDKTPYEIWT 324
Query: 181 GSKVSLRHFRIWGCPAHVLKGKTGKLHPRSEVYLFVGYPKGTRGGLFYD 327
G + SL +IWGC +V + ++ KL P+S+ Y FVGYPK T+G FY+
Sbjct: 325 GKRPSLSFLKIWGCEVYVKRLQSDKLTPKSDKYFFVGYPKETKGYYFYN 373
>gb|EXC27156.1| hypothetical protein L484_000603 [Morus notabilis]
Length = 246
Score = 142 bits (358), Expect = 5e-32
Identities = 65/92 (70%), Positives = 75/92 (81%)
Frame = +1
Query: 49 MVRSMMSYATLPDSFWGYALQTAVYILNVVPSKSIQKTPLELWNGSKVSLRHFRIWGCPA 228
M+RS++SY++LP FWGYAL+T YILN VPSKSI KTPLELW G K LRH RIWGCPA
Sbjct: 1 MMRSLLSYSSLPTLFWGYALRTTAYILNRVPSKSIPKTPLELWCGRKPRLRHVRIWGCPA 60
Query: 229 HVLKGKTGKLHPRSEVYLFVGYPKGTRGGLFY 324
HVLKGKTGKL P+SE+ +FVGY GT+ G FY
Sbjct: 61 HVLKGKTGKLEPKSEICMFVGYLDGTKRGFFY 92
>dbj|BAA22288.1| polyprotein [Oryza australiensis]
Length = 1317
Score = 137 bits (345), Expect = 1e-30
Identities = 66/109 (60%), Positives = 81/109 (74%)
Frame = +1
Query: 1 PQQNGVAERRNRTLLDMVRSMMSYATLPDSFWGYALQTAVYILNVVPSKSIQKTPLELWN 180
PQ NGV+ERRNRTLLDMVRSMMS + LP SFWGYAL+TA LN VPSKS++KTP E+W
Sbjct: 594 PQWNGVSERRNRTLLDMVRSMMSQSDLPLSFWGYALETAALTLNRVPSKSVEKTPYEIWT 653
Query: 181 GSKVSLRHFRIWGCPAHVLKGKTGKLHPRSEVYLFVGYPKGTRGGLFYD 327
G SL +IWGC A+V + ++ KL P+S+ VGYPK T+G FY+
Sbjct: 654 GQPPSLSFLKIWGCEAYVKRLQSDKLTPKSDKCFVVGYPKETKGYYFYN 702
>ref|XP_004978922.1| PREDICTED: uncharacterized protein LOC101776990, partial [Setaria
italica]
Length = 1686
Score = 137 bits (344), Expect = 2e-30
Identities = 65/109 (59%), Positives = 81/109 (74%)
Frame = +1
Query: 1 PQQNGVAERRNRTLLDMVRSMMSYATLPDSFWGYALQTAVYILNVVPSKSIQKTPLELWN 180
PQ+NGV+ERRNRTLLDMVRSMMS + LP SFWGYAL+TA + LN VPSKS+ KTP E+W
Sbjct: 43 PQRNGVSERRNRTLLDMVRSMMSQSDLPLSFWGYALETAAFTLNRVPSKSVVKTPYEIWT 102
Query: 181 GSKVSLRHFRIWGCPAHVLKGKTGKLHPRSEVYLFVGYPKGTRGGLFYD 327
G SL +IWGC V + ++ K+ P+S+ +FVGYPK T G FY+
Sbjct: 103 GKVPSLSFLKIWGCEVFVKRLQSDKITPKSDKCIFVGYPKETLGYFFYN 151
>gb|EMS50467.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Triticum
urartu]
Length = 1808
Score = 135 bits (339), Expect = 7e-30
Identities = 65/108 (60%), Positives = 77/108 (71%)
Frame = +1
Query: 1 PQQNGVAERRNRTLLDMVRSMMSYATLPDSFWGYALQTAVYILNVVPSKSIQKTPLELWN 180
PQ+NGV+ERRN TLLDMVRSMMS LP SFWGYAL+TA + LN PSKS++ TP ELW
Sbjct: 1186 PQRNGVSERRNHTLLDMVRSMMSLTDLPLSFWGYALETAAFTLNRAPSKSVETTPYELWF 1245
Query: 181 GSKVSLRHFRIWGCPAHVLKGKTGKLHPRSEVYLFVGYPKGTRGGLFY 324
G K L ++WGC A+V K + KL P SE +F+GYPK T G FY
Sbjct: 1246 GKKHKLSFLKVWGCDAYVKKLQPDKLEPTSEKCVFIGYPKETVGYTFY 1293
>emb|CBI20118.3| unnamed protein product [Vitis vinifera]
Length = 1354
Score = 135 bits (339), Expect = 7e-30
Identities = 66/110 (60%), Positives = 80/110 (72%), Gaps = 2/110 (1%)
Frame = +1
Query: 1 PQQNGVAERRNRTLLDMVRSMMSYATLPDSFWGYALQTAVYILNVVPSKSIQKTPLELWN 180
PQQNGVAERRNRTL++MVRSMMSY+++P S WG AL+TA+YILN VPSK++ KTP ELW
Sbjct: 969 PQQNGVAERRNRTLMEMVRSMMSYSSVPISLWGEALKTAMYILNRVPSKAVPKTPFELWT 1028
Query: 181 GSKVSLRHFRIWGCP--AHVLKGKTGKLHPRSEVYLFVGYPKGTRGGLFY 324
G K SLRH IWGCP A + KL R+ F+GYP ++G FY
Sbjct: 1029 GRKPSLRHIHIWGCPAEARIYNPHEKKLDSRTVSGYFIGYPDKSKGYRFY 1078
>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
19.29) [Arabidopsis thaliana] gi|7267136|emb|CAB80804.1|
putative retrotransposon protein [Arabidopsis thaliana]
Length = 964
Score = 134 bits (338), Expect = 1e-29
Identities = 62/108 (57%), Positives = 79/108 (73%)
Frame = +1
Query: 1 PQQNGVAERRNRTLLDMVRSMMSYATLPDSFWGYALQTAVYILNVVPSKSIQKTPLELWN 180
PQ NGV+ERRNRTLLDMVRSMMS+ LP FWGYAL+T+ ++LN PSKS++KTP E+W
Sbjct: 238 PQWNGVSERRNRTLLDMVRSMMSHTDLPSPFWGYALETSAFMLNRCPSKSVEKTPYEIWT 297
Query: 181 GSKVSLRHFRIWGCPAHVLKGKTGKLHPRSEVYLFVGYPKGTRGGLFY 324
G +L +IWGC ++ + T KL P+S+ FVGYPK T+G FY
Sbjct: 298 GKVPNLSFLKIWGCESYAKRLITDKLGPKSDKCYFVGYPKETKGYYFY 345
>emb|CAN81793.1| hypothetical protein VITISV_020571 [Vitis vinifera]
Length = 1193
Score = 134 bits (337), Expect = 1e-29
Identities = 66/111 (59%), Positives = 79/111 (71%), Gaps = 2/111 (1%)
Frame = +1
Query: 1 PQQNGVAERRNRTLLDMVRSMMSYATLPDSFWGYALQTAVYILNVVPSKSIQKTPLELWN 180
P QNGVAERRNRTL DMVRSM+S++TLP+S WG A++TAVYILN VPSK++ KTP ELW
Sbjct: 464 PSQNGVAERRNRTLKDMVRSMISHSTLPESLWGEAIKTAVYILNRVPSKAVAKTPYELWT 523
Query: 181 GSKVSLRHFRIWGCPAHV--LKGKTGKLHPRSEVYLFVGYPKGTRGGLFYD 327
K S+RH +WGCPA K KL R+ FVGY + +RG FYD
Sbjct: 524 SKKPSIRHLHVWGCPAEARPYKPNEKKLDSRTVSCYFVGYSERSRGFKFYD 574
>emb|CAN78069.1| hypothetical protein VITISV_032701 [Vitis vinifera]
Length = 1381
Score = 134 bits (337), Expect = 1e-29
Identities = 66/111 (59%), Positives = 79/111 (71%), Gaps = 2/111 (1%)
Frame = +1
Query: 1 PQQNGVAERRNRTLLDMVRSMMSYATLPDSFWGYALQTAVYILNVVPSKSIQKTPLELWN 180
P QNGVAERRNRTL DMVRSM+S++TLP+S WG A++TAVYILN VPSK++ KTP ELW
Sbjct: 637 PSQNGVAERRNRTLKDMVRSMISHSTLPESLWGEAIKTAVYILNRVPSKAVAKTPYELWT 696
Query: 181 GSKVSLRHFRIWGCPAHV--LKGKTGKLHPRSEVYLFVGYPKGTRGGLFYD 327
K S+RH +WGCPA K KL R+ FVGY + +RG FYD
Sbjct: 697 SKKPSIRHLHVWGCPAEARPYKPNEKKLDSRTVSCYFVGYSERSRGFKFYD 747
>gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1050
Score = 134 bits (337), Expect = 1e-29
Identities = 63/109 (57%), Positives = 79/109 (72%)
Frame = +1
Query: 1 PQQNGVAERRNRTLLDMVRSMMSYATLPDSFWGYALQTAVYILNVVPSKSIQKTPLELWN 180
PQ NGV+ERRNRTLLD+VRSMMS LP SFW YAL+ A + LN VPSKS+ KTP E+W
Sbjct: 390 PQWNGVSERRNRTLLDIVRSMMSQTDLPLSFWAYALEKAAFTLNKVPSKSVNKTPYEIWT 449
Query: 181 GSKVSLRHFRIWGCPAHVLKGKTGKLHPRSEVYLFVGYPKGTRGGLFYD 327
G + SL +IWGC +V + ++ KL P+S+ FVGYPK T+G FY+
Sbjct: 450 GKRPSLSFLKIWGCEVYVKRLQSDKLTPKSDKCFFVGYPKETKGYYFYN 498
>gb|AAD17357.1| contains similarity to retrovirus-related polyproteins [Arabidopsis
thaliana] gi|7267382|emb|CAB77943.1| putative transposon
protein [Arabidopsis thaliana]
Length = 769
Score = 133 bits (334), Expect = 3e-29
Identities = 64/108 (59%), Positives = 80/108 (74%)
Frame = +1
Query: 1 PQQNGVAERRNRTLLDMVRSMMSYATLPDSFWGYALQTAVYILNVVPSKSIQKTPLELWN 180
PQ NGV+ERRN+TLLDMVRSMMS+ LP SFWGYAL+T V++LN PSKS++KTP E+W
Sbjct: 270 PQGNGVSERRNQTLLDMVRSMMSHTDLPSSFWGYALETYVFMLNRCPSKSVEKTPYEIWT 329
Query: 181 GSKVSLRHFRIWGCPAHVLKGKTGKLHPRSEVYLFVGYPKGTRGGLFY 324
G +L +I GC A+V + T KL P+S+ FVGYPK T+G FY
Sbjct: 330 GKVPNLSFLKILGCEAYVKRLITDKLGPKSDKCYFVGYPKETKGYYFY 377
>gb|AAM74249.1|AC074355_11 Putative retroelement [Oryza sativa Japonica Group]
Length = 700
Score = 133 bits (334), Expect = 3e-29
Identities = 65/111 (58%), Positives = 82/111 (73%), Gaps = 2/111 (1%)
Frame = +1
Query: 1 PQQNGVAERRNRTLLDMVRSMMSYATLPDSFWGYALQTAVYILNVVPSKSIQKTPLELWN 180
PQ NGV++RRNRTLLDMVRSMMS LP SFWGYAL+TAV+ +N VPSKS+ KTP E+W
Sbjct: 143 PQLNGVSKRRNRTLLDMVRSMMSQTDLPLSFWGYALETAVFTVNRVPSKSMDKTPYEIWT 202
Query: 181 GSKVSLRHFRIWGCPAHVLKGKTGKLHP--RSEVYLFVGYPKGTRGGLFYD 327
G + SL +IWGC +V + ++ KL P +S+ FVGYPK T+G FY+
Sbjct: 203 GKRPSLSFLKIWGCEVYVKRLQSDKLTPKSKSDKCFFVGYPKETKGYYFYN 253
>gb|AAP52343.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 655
Score = 133 bits (334), Expect = 3e-29
Identities = 65/111 (58%), Positives = 82/111 (73%), Gaps = 2/111 (1%)
Frame = +1
Query: 1 PQQNGVAERRNRTLLDMVRSMMSYATLPDSFWGYALQTAVYILNVVPSKSIQKTPLELWN 180
PQ NGV++RRNRTLLDMVRSMMS LP SFWGYAL+TAV+ +N VPSKS+ KTP E+W
Sbjct: 143 PQLNGVSKRRNRTLLDMVRSMMSQTDLPLSFWGYALETAVFTVNRVPSKSMDKTPYEIWT 202
Query: 181 GSKVSLRHFRIWGCPAHVLKGKTGKLHP--RSEVYLFVGYPKGTRGGLFYD 327
G + SL +IWGC +V + ++ KL P +S+ FVGYPK T+G FY+
Sbjct: 203 GKRPSLSFLKIWGCEVYVKRLQSDKLTPKSKSDKCFFVGYPKETKGYYFYN 253
>gb|EMS67284.1| Spastin [Triticum urartu]
Length = 1541
Score = 132 bits (333), Expect = 4e-29
Identities = 64/108 (59%), Positives = 77/108 (71%)
Frame = +1
Query: 1 PQQNGVAERRNRTLLDMVRSMMSYATLPDSFWGYALQTAVYILNVVPSKSIQKTPLELWN 180
PQ+NGV+ERRNRTLLDMVRSMMS LP SFWGYAL+TA + LN PSKS++ TP E W
Sbjct: 395 PQRNGVSERRNRTLLDMVRSMMSLTDLPLSFWGYALETAAFTLNRAPSKSVETTPYEPWF 454
Query: 181 GSKVSLRHFRIWGCPAHVLKGKTGKLHPRSEVYLFVGYPKGTRGGLFY 324
K L ++WGC A+V K + KL P+SE +F+GYPK T G FY
Sbjct: 455 SKKPKLPFLKVWGCDAYVQKLQPDKLKPKSEKCVFIGYPKETIGYTFY 502
>emb|CAE02960.2| OSJNBb0050N09.11 [Oryza sativa Japonica Group]
Length = 1405
Score = 132 bits (333), Expect = 4e-29
Identities = 66/110 (60%), Positives = 79/110 (71%), Gaps = 2/110 (1%)
Frame = +1
Query: 1 PQQNGVAERRNRTLLDMVRSMMSYATLPDSFWGYALQTAVYILNVVPSKSIQKTPLELWN 180
PQQNGVAERRNRTL+DMVRSMMSY+TLP W AL+TA++ILN VPSKS+ KTP ELW
Sbjct: 621 PQQNGVAERRNRTLMDMVRSMMSYSTLPLGLWMEALKTAIHILNRVPSKSVPKTPYELWT 680
Query: 181 GSKVSLRHFRIWGCPAH--VLKGKTGKLHPRSEVYLFVGYPKGTRGGLFY 324
G SL H R+WG PA V GKL P++ F+GYP+ ++G FY
Sbjct: 681 GRVPSLTHLRVWGSPAEAKVFNPNIGKLDPKTVSCHFIGYPERSKGYRFY 730
>emb|CAE04259.3| OSJNBa0089N06.20 [Oryza sativa Japonica Group]
Length = 1405
Score = 132 bits (333), Expect = 4e-29
Identities = 66/110 (60%), Positives = 79/110 (71%), Gaps = 2/110 (1%)
Frame = +1
Query: 1 PQQNGVAERRNRTLLDMVRSMMSYATLPDSFWGYALQTAVYILNVVPSKSIQKTPLELWN 180
PQQNGVAERRNRTL+DMVRSMMSY+TLP W AL+TA++ILN VPSKS+ KTP ELW
Sbjct: 621 PQQNGVAERRNRTLMDMVRSMMSYSTLPLGLWMEALKTAIHILNRVPSKSVPKTPYELWT 680
Query: 181 GSKVSLRHFRIWGCPAH--VLKGKTGKLHPRSEVYLFVGYPKGTRGGLFY 324
G SL H R+WG PA V GKL P++ F+GYP+ ++G FY
Sbjct: 681 GRVPSLTHLRVWGSPAEAKVFNPNIGKLDPKTVSCHFIGYPERSKGYRFY 730