BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00032521
         (492 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004246986.1| PREDICTED: pentatricopeptide repeat-containi...    87   2e-15
gb|EOY04454.1| Pentatricopeptide repeat superfamily protein, put...    82   7e-14
ref|XP_002323670.2| hypothetical protein POPTR_0016s14370g [Popu...    76   4e-12
gb|EXC23833.1| hypothetical protein L484_006096 [Morus notabilis]      73   4e-11
gb|ESW12077.1| hypothetical protein PHAVU_008G082800g [Phaseolus...    69   6e-10
ref|XP_006842489.1| hypothetical protein AMTR_s00077p00087500 [A...    67   3e-09
ref|XP_006481194.1| PREDICTED: pentatricopeptide repeat-containi...    65   9e-09
ref|XP_006429582.1| hypothetical protein CICLE_v10013314mg, part...    65   9e-09
ref|XP_004305082.1| PREDICTED: pentatricopeptide repeat-containi...    65   9e-09
ref|XP_006587922.1| PREDICTED: pentatricopeptide repeat-containi...    59   5e-07
ref|XP_002531431.1| pentatricopeptide repeat-containing protein,...    58   1e-06
ref|NP_194530.1| pentatricopeptide repeat-containing protein [Ar...    58   1e-06
ref|XP_006352876.1| PREDICTED: pentatricopeptide repeat-containi...    57   2e-06
gb|EMJ08148.1| hypothetical protein PRUPE_ppb018157mg [Prunus pe...    57   3e-06
gb|AAM91084.1| AT4g28010/T13J8_120 [Arabidopsis thaliana]              57   3e-06
ref|XP_006836883.1| hypothetical protein AMTR_s00099p00108770 [A...    56   4e-06
gb|EMJ25653.1| hypothetical protein PRUPE_ppa022157mg [Prunus pe...    56   4e-06
gb|ESW28383.1| hypothetical protein PHAVU_003G282300g [Phaseolus...    56   6e-06
ref|XP_006405387.1| hypothetical protein EUTSA_v10028208mg, part...    56   6e-06
ref|XP_006282494.1| hypothetical protein CARUB_v10006484mg [Caps...    56   6e-06

>ref|XP_004246986.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Solanum lycopersicum]
          Length = 461

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 45/88 (51%), Positives = 62/88 (70%), Gaps = 1/88 (1%)
 Frame = -1

Query: 492 FCNGREIGRAFEIFNEMVKIGHSPKTFTFNIVIRALCGVGEVRKGLTVLMLMHKDRK-PS 316
           FC+G ++ +A E   EM++IG+SPK FTF+ +IR LC  GEV K L V + M K+ K PS
Sbjct: 353 FCSGNKLDKALENLYEMIRIGYSPKAFTFSNLIRVLCLEGEVEKALLVFVPMMKNGKSPS 412

Query: 315 RIPFNFLINELNRQGRSLPARNVYGMAL 232
           ++PFN LINELN++   L A  +YG+AL
Sbjct: 413 KVPFNLLINELNQKEMILNACYLYGVAL 440


>gb|EOY04454.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
           cacao]
          Length = 523

 Score = 82.0 bits (201), Expect = 7e-14
 Identities = 39/87 (44%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
 Frame = -1

Query: 489 CNGREIGRAFEIFNEMVKIGHSPKTFTFNIVIRALCGVGEVRKGLTVLMLMHKDRK-PSR 313
           C G+++  A +   +M+++G+ P+T TFN VI+ALC  G++R+ L VL++M++  K PSR
Sbjct: 409 CVGKKMEEALDHLQQMIRMGYIPRTITFNNVIQALCTEGKIREALVVLVIMYESGKIPSR 468

Query: 312 IPFNFLINELNRQGRSLPARNVYGMAL 232
             ++ L+ E N QGR L A NVYG AL
Sbjct: 469 TSYDILVKEFNHQGRLLGASNVYGAAL 495


>ref|XP_002323670.2| hypothetical protein POPTR_0016s14370g [Populus trichocarpa]
           gi|550321496|gb|EEF05431.2| hypothetical protein
           POPTR_0016s14370g [Populus trichocarpa]
          Length = 424

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 41/84 (48%), Positives = 60/84 (71%), Gaps = 1/84 (1%)
 Frame = -1

Query: 480 REIGRAFEIFNEMVKIGHSPKTFTFNIVIRALCGVGEVRKGLTVLMLMHKDRK-PSRIPF 304
           +++  AF   ++MV++G+ P+  T N VIRALC  G+V K   VL+LM+++ K PSR+ +
Sbjct: 329 KKVDDAFINLHQMVRLGYIPRLITINNVIRALCVGGKVDKAFYVLVLMYENSKIPSRMSY 388

Query: 303 NFLINELNRQGRSLPARNVYGMAL 232
           + LI+ELNRQ R+L A NVYG AL
Sbjct: 389 DLLIHELNRQERTLGACNVYGAAL 412


>gb|EXC23833.1| hypothetical protein L484_006096 [Morus notabilis]
          Length = 618

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 39/87 (44%), Positives = 59/87 (67%), Gaps = 1/87 (1%)
 Frame = -1

Query: 489 CNGREIGRAFEIFNEMVKIGHSPKTFTFNIVIRALCGVGEVRKGLTVLMLMHKD-RKPSR 313
           C G++   A     +M+++G+SP+  TFN VIRALC   +V + L++L+L++++ R PSR
Sbjct: 520 CMGKKTDDASVYLQKMIRMGYSPRMVTFNGVIRALCLEEKVIEALSILVLLNEEGRIPSR 579

Query: 312 IPFNFLINELNRQGRSLPARNVYGMAL 232
             +N LI+ELN+ G  L A NVYG AL
Sbjct: 580 TCYNLLIDELNQHGSLLGASNVYGAAL 606


>gb|ESW12077.1| hypothetical protein PHAVU_008G082800g [Phaseolus vulgaris]
          Length = 514

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 36/87 (41%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
 Frame = -1

Query: 489 CNGREIGRAFEIFNEMVKIGHSPKTFTFNIVIRALCGVGEVRKGLTVLMLMHKDRK-PSR 313
           C G    +AF   NEMV +G+SP+  TF+ VI  LC  G V   ++ L+L+H     PSR
Sbjct: 402 CVGMRFDQAFAALNEMVGLGYSPEVVTFDKVILGLCAEGRVDDAVSTLVLLHASGGIPSR 461

Query: 312 IPFNFLINELNRQGRSLPARNVYGMAL 232
             ++ LI ELN++G+   A N++G AL
Sbjct: 462 FSYDVLIKELNKEGKLFCACNLFGAAL 488


>ref|XP_006842489.1| hypothetical protein AMTR_s00077p00087500 [Amborella trichopoda]
           gi|548844575|gb|ERN04164.1| hypothetical protein
           AMTR_s00077p00087500 [Amborella trichopoda]
          Length = 334

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 33/83 (39%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
 Frame = -1

Query: 477 EIGRAFEIFNEMVKIGHSPKTFTFNIVIRALCGVGEVRKGLTVLMLM-HKDRKPSRIPFN 301
           E+ +A  I  EM++ GH PK  T+N +I+ LC  G V   + VL LM  ++  PS+  +N
Sbjct: 226 EMEKALSILTEMIENGHPPKRMTYNTLIKGLCSKGRVDDAMDVLKLMFERETSPSKAAYN 285

Query: 300 FLINELNRQGRSLPARNVYGMAL 232
            LI E N+ GR   A  +Y  AL
Sbjct: 286 ILIREFNQSGRVFDASRLYAKAL 308


>ref|XP_006481194.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Citrus sinensis]
          Length = 387

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 34/85 (40%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
 Frame = -1

Query: 483 GREIGRAFEIFNEMVKIGHSPKTFTFNIVIRALCGVGEVRKGLTVLMLMHKDRK-PSRIP 307
           G++   A    +  +++GH P+T TFN VI+ALCG G++ K L +L LM++  K PSR  
Sbjct: 291 GKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTS 350

Query: 306 FNFLINELNRQGRSLPARNVYGMAL 232
           ++ LI +L++  +S  A  +YG AL
Sbjct: 351 YDMLITKLDQLEKSYDACALYGAAL 375


>ref|XP_006429582.1| hypothetical protein CICLE_v10013314mg, partial [Citrus clementina]
           gi|557531639|gb|ESR42822.1| hypothetical protein
           CICLE_v10013314mg, partial [Citrus clementina]
          Length = 438

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 34/85 (40%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
 Frame = -1

Query: 483 GREIGRAFEIFNEMVKIGHSPKTFTFNIVIRALCGVGEVRKGLTVLMLMHKDRK-PSRIP 307
           G++   A    +  +++GH P+T TFN VI+ALCG G++ K L +L LM++  K PSR  
Sbjct: 342 GKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTS 401

Query: 306 FNFLINELNRQGRSLPARNVYGMAL 232
           ++ LI +L++  +S  A  +YG AL
Sbjct: 402 YDMLITKLDQLEKSYDACALYGAAL 426


>ref|XP_004305082.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16640,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 509

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 36/87 (41%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
 Frame = -1

Query: 489 CNGREIGRAFEIFNEMVKIGHSPKTFTFNIVIRALCGVGEVRKGLTVLMLMHK-DRKPSR 313
           C G++I  A     +M+ +G+SP+  TFN VI++LC   ++   L VL   +K DR  SR
Sbjct: 411 CMGKKIDDAMINLKQMLTVGYSPRMITFNNVIQSLCAEEKMIDALLVLGTAYKFDRVASR 470

Query: 312 IPFNFLINELNRQGRSLPARNVYGMAL 232
           + +N LI +LN+ G  L A  VYG AL
Sbjct: 471 VSYNLLIQKLNQHGSMLEACTVYGAAL 497


>ref|XP_006587922.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16640,
           mitochondrial-like [Glycine max]
          Length = 507

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 30/87 (34%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
 Frame = -1

Query: 489 CNGREIGRAFEIFNEMVKIGHSPKTFTFNIVIRALCGVGEVRKGLTVLMLMHKD-RKPSR 313
           C G+   +A     EMV++G+SP+   F+ VI+ LC  G V   ++ L+L+H +   P+R
Sbjct: 401 CEGKRFDQALANLYEMVRLGYSPEVIAFDKVIQGLCDEGRVDDAVSALVLLHANGGVPNR 460

Query: 312 IPFNFLINELNRQGRSLPARNVYGMAL 232
           + ++ LI EL  +GR   A N++  A+
Sbjct: 461 VSYDVLIKELIEEGRLFCASNLFCAAV 487


>ref|XP_002531431.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528950|gb|EEF30943.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 737

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 32/83 (38%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
 Frame = -1

Query: 492 FCNGREIGRAFEIFNEMVKIGHSPKTFTFNIVIRALCGVGEVRKGLTVLMLMHKDR-KPS 316
           FC    + RA EI NEM+  G SP   T+  V+  LC VG+V +   +L  M+K   KP+
Sbjct: 357 FCMQGRMDRAKEIVNEMITKGCSPDVVTYTAVVNGLCKVGKVEEAKKMLQQMYKHGCKPN 416

Query: 315 RIPFNFLINELNRQGRSLPARNV 247
            + +  L+N L + G SL AR +
Sbjct: 417 TVSYTALLNGLCQHGNSLEAREM 439


>ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g28010 gi|4455360|emb|CAB36770.1| putative protein
           [Arabidopsis thaliana] gi|7269655|emb|CAB79603.1|
           putative protein [Arabidopsis thaliana]
           gi|332660020|gb|AEE85420.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 704

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 28/75 (37%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
 Frame = -1

Query: 492 FCNGREIGRAFEIFNEMVKIGHSPKTFTFNIVIRALCGVGEVRKGLTVLMLM-HKDRKPS 316
           FC   ++  A EIF  M++ G  P  +T+  +I  LCGVG+ ++ L +L LM  KD +P+
Sbjct: 292 FCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPN 351

Query: 315 RIPFNFLINELNRQG 271
            + +N +IN+L + G
Sbjct: 352 AVTYNIIINKLCKDG 366


>ref|XP_006352876.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like isoform X1 [Solanum tuberosum]
           gi|565372595|ref|XP_006352877.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like isoform X2 [Solanum tuberosum]
          Length = 720

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
 Frame = -1

Query: 489 CNGREIGRAFEIFNEMVKIGHSPKTFTFNIVIRALCGVGEVRKGLTVLM-LMHKDRKPSR 313
           CN   + RA  +F EM++ G  P   T NI+I   C +G+V+  L  L  L+H+   P  
Sbjct: 569 CNDGAVERALGLFEEMMRKGSKPNHVTCNILINGFCRIGKVQNALEFLRDLIHRGLTPDI 628

Query: 312 IPFNFLINELNRQGRSLPARNVY 244
           + +N LIN L   GR   A+N++
Sbjct: 629 VTYNSLINGLCNNGRIREAQNLF 651


>gb|EMJ08148.1| hypothetical protein PRUPE_ppb018157mg [Prunus persica]
          Length = 412

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 34/87 (39%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
 Frame = -1

Query: 489 CNGREIGRAFEIFNEMVKIGHSPKTFTFNIVIRALCGVGEVRKGLTVLMLMHK-DRKPSR 313
           C  +++  A     +M+ +G+SP   TFN VI+ LC  G+V + L VL +M++  R  + 
Sbjct: 314 CMEKKMYAAVFCLQQMIGMGYSPWIITFNNVIKTLCVEGKVTEALLVLSIMYEGGRGTNG 373

Query: 312 IPFNFLINELNRQGRSLPARNVYGMAL 232
           I +  LI+ LNR+G  L A +VYG AL
Sbjct: 374 ISYKPLIHGLNRRGSFLGACSVYGAAL 400


>gb|AAM91084.1| AT4g28010/T13J8_120 [Arabidopsis thaliana]
          Length = 704

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
 Frame = -1

Query: 492 FCNGREIGRAFEIFNEMVKIGHSPKTFTFNIVIRALCGVGEVRKGLTVLMLM-HKDRKPS 316
           FC   ++  A EIF  M++ G  P  +T+  +I  LCGVG+ ++ L  L LM  KD +P+
Sbjct: 292 FCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPN 351

Query: 315 RIPFNFLINELNRQG 271
            + +N +IN+L + G
Sbjct: 352 AVTYNIIINKLCKDG 366


>ref|XP_006836883.1| hypothetical protein AMTR_s00099p00108770 [Amborella trichopoda]
           gi|548839447|gb|ERM99736.1| hypothetical protein
           AMTR_s00099p00108770 [Amborella trichopoda]
          Length = 712

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
 Frame = -1

Query: 489 CNGREIGRAFEIFNEMVKIGHSPKTFTFNIVIRALCGVGEVRKGLTVLM-LMHKDRKPSR 313
           C    I RA  +F +MV+ G +P   ++NI+I  +C  G ++ GL +L  ++H+   P  
Sbjct: 565 CREGVIERALGLFEDMVRRGVAPNNISYNILINGICKTGNIQSGLELLKEMLHRGCMPDV 624

Query: 312 IPFNFLINELNRQGRSLPARNVY 244
           + +N LIN L + GR   A N++
Sbjct: 625 VTYNSLINGLCKSGRMGEALNLF 647


>gb|EMJ25653.1| hypothetical protein PRUPE_ppa022157mg [Prunus persica]
          Length = 604

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
 Frame = -1

Query: 489 CNGREIGRAFEIFNEMVKIGHSPKTFTFNIVIRALCGVGEVRKGLTVLMLMHKDR-KPSR 313
           C    I  AFE F EMV+ G +P   T+NI+IRALC +G++ + + ++  M  D  KP  
Sbjct: 445 CRLNRIDDAFECFAEMVRWGVTPNAITYNILIRALCFIGDIARSMGLMKRMEADGIKPDA 504

Query: 312 IPFNFLINELNRQGRSLPARNVY 244
             FN LI  L R  +   A  ++
Sbjct: 505 YSFNALIQCLCRMNKVEKAEELF 527


>gb|ESW28383.1| hypothetical protein PHAVU_003G282300g [Phaseolus vulgaris]
          Length = 661

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
 Frame = -1

Query: 489 CNGREIGRAFEIFNEMVKIGHSPKTFTFNIVIRALCGVGEVRKGLTVLMLMHKDR-KPSR 313
           C  ++I  AFE F EM++ G +P    +NI+IR+LC +G+V + + +L  M K+   P  
Sbjct: 494 CRIKKIEEAFECFTEMIEWGITPNAVIYNILIRSLCAIGDVARSVKLLRRMQKEGVNPDT 553

Query: 312 IPFNFLINELNRQGRSLPARNVY 244
             +N LI    R  +   A+N++
Sbjct: 554 YSYNALIQIFCRTNKVDKAKNIF 576


>ref|XP_006405387.1| hypothetical protein EUTSA_v10028208mg, partial [Eutrema
           salsugineum] gi|557106525|gb|ESQ46840.1| hypothetical
           protein EUTSA_v10028208mg, partial [Eutrema salsugineum]
          Length = 465

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
 Frame = -1

Query: 489 CNGREIGRAFEIFNEMVKIGHSPKTFTFNIVIRALCGVGEVRKGLTVLM-LMHKDRKPSR 313
           C  R +  A  +FN+M   G  P  FT+  ++  LC  G    G  +L  +M +D KP  
Sbjct: 160 CKNRHVDDALNLFNKMESNGVRPDVFTYTSLVNGLCNSGRWSDGAILLRDMMKRDIKPDV 219

Query: 312 IPFNFLINELNRQGRSLPARNVY 244
           I FN LI+   ++G+ L AR +Y
Sbjct: 220 ITFNALIDAFLKEGKLLEARELY 242


>ref|XP_006282494.1| hypothetical protein CARUB_v10006484mg [Capsella rubella]
           gi|482551199|gb|EOA15392.1| hypothetical protein
           CARUB_v10006484mg [Capsella rubella]
          Length = 747

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 27/83 (32%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
 Frame = -1

Query: 492 FCNGREIGRAFEIFNEMVKIGHSPKTFTFNIVIRALCGVGEVRKGLTV-LMLMHKDRKPS 316
           FC  R    A++++NEM+++G  P  FT+  +I A C  G++ K L +   ++ K   P 
Sbjct: 494 FCEQRRTKEAYDLYNEMLRVGLPPDEFTYTALINAYCMEGDLEKALHLHNEMVEKGVLPD 553

Query: 315 RIPFNFLINELNRQGRSLPARNV 247
            + ++ LIN LN+Q R+  A+ +
Sbjct: 554 VVTYSVLINGLNKQSRTREAKRL 576