BLASTX nr result
ID: Rehmannia22_contig00032475
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00032475
(894 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EPS73675.1| hypothetical protein M569_01080 [Genlisea aurea] 305 1e-80
ref|XP_004232547.1| PREDICTED: pentatricopeptide repeat-containi... 294 3e-77
ref|XP_006340813.1| PREDICTED: pentatricopeptide repeat-containi... 288 2e-75
emb|CAN69960.1| hypothetical protein VITISV_032887 [Vitis vinifera] 247 4e-63
gb|EOX90708.1| Tetratricopeptide repeat (TPR)-like superfamily p... 243 7e-62
ref|XP_006467049.1| PREDICTED: pentatricopeptide repeat-containi... 233 6e-59
ref|XP_006425315.1| hypothetical protein CICLE_v10025555mg [Citr... 233 9e-59
ref|XP_002267809.2| PREDICTED: pentatricopeptide repeat-containi... 231 4e-58
ref|XP_004510105.1| PREDICTED: pentatricopeptide repeat-containi... 228 2e-57
gb|EMJ05384.1| hypothetical protein PRUPE_ppa015299mg [Prunus pe... 228 3e-57
ref|XP_003626687.1| Pentatricopeptide repeat-containing protein ... 226 7e-57
ref|XP_004287745.1| PREDICTED: pentatricopeptide repeat-containi... 226 1e-56
ref|XP_002521681.1| pentatricopeptide repeat-containing protein,... 223 7e-56
ref|XP_002306437.1| pentatricopeptide repeat-containing family p... 219 8e-55
ref|XP_006409268.1| hypothetical protein EUTSA_v10022683mg [Eutr... 214 3e-53
ref|XP_002884075.1| pentatricopeptide repeat-containing protein ... 214 3e-53
ref|NP_973481.1| pentatricopeptide repeat-containing protein [Ar... 210 7e-52
ref|NP_565422.1| pentatricopeptide repeat-containing protein [Ar... 210 7e-52
gb|AAM62704.1| unknown [Arabidopsis thaliana] 209 1e-51
gb|EXC35267.1| hypothetical protein L484_026589 [Morus notabilis] 209 1e-51
>gb|EPS73675.1| hypothetical protein M569_01080 [Genlisea aurea]
Length = 469
Score = 305 bits (782), Expect = 1e-80
Identities = 160/271 (59%), Positives = 189/271 (69%), Gaps = 2/271 (0%)
Frame = +1
Query: 88 MGKIPPAFRRAASQSPLSTLLKPNTSAALQEQIPSPISNFPTQKKSSKK--NPIKSDDST 261
MGK+PP FR A+ +LLKP S + +P + TQK SK+ P K DST
Sbjct: 1 MGKVPPIFRMTAT-----SLLKPKVSGVRTKDVPD-LPALLTQKVDSKRVRRPQKKSDST 54
Query: 262 TKSNVPSITFESPNLSEAKSLFNSLISSTKNTPSDSSFYNXXXXXXXXXXXXXXXXXXFN 441
K +V SI FES NL++AKSLFNSL+S P D +F N N
Sbjct: 55 PKIDVSSIAFESSNLADAKSLFNSLVSGGAGIPRDPNFCNSILQSFSSVATPQDSIMFLN 114
Query: 442 HMVKKHPAFCPNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRS 621
HM+KKHP+F PNR TY+ LL QSCSS DE+S+S VH ILNLM ++GFPPNQ S +AVR+
Sbjct: 115 HMLKKHPSFSPNRLTYNILLKQSCSSADEQSVSGVHGILNLMKDSGFPPNQSSASIAVRA 174
Query: 622 LCGCGREEHAIELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMREFGIKPD 801
LC GREEHA+EL+KELS KN PD +TYN LV+HLVKNRSLS+VNCF+KDMREFG+KP
Sbjct: 175 LCESGREEHAVELVKELSTKNLPPDEHTYNTLVKHLVKNRSLSSVNCFVKDMREFGVKPT 234
Query: 802 LVTYTIMIDNVCNSKNLREATRLLGVLSEEG 894
L+TYTIMIDNVCNSKNLREA RLL VLSEEG
Sbjct: 235 LITYTIMIDNVCNSKNLREAMRLLSVLSEEG 265
Score = 73.9 bits (180), Expect = 7e-11
Identities = 63/243 (25%), Positives = 102/243 (41%)
Frame = +1
Query: 145 LLKPNTSAALQEQIPSPISNFPTQKKSSKKNPIKSDDSTTKSNVPSITFESPNLSEAKSL 324
LLK + S+A EQ S + K S P +S S + ES A L
Sbjct: 133 LLKQSCSSA-DEQSVSGVHGILNLMKDSGFPPNQSSASIAVRAL----CESGREEHAVEL 187
Query: 325 FNSLISSTKNTPSDSSFYNXXXXXXXXXXXXXXXXXXFNHMVKKHPAFCPNRFTYHTLLV 504
L STKN P D YN M + P TY ++
Sbjct: 188 VKEL--STKNLPPDEHTYNTLVKHLVKNRSLSSVNCFVKDM--REFGVKPTLITYTIMID 243
Query: 505 QSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLCGCGREEHAIELIKELSAKN 684
C+S ++L R+L++++ G+ P++ + ++ C + + + K++ +
Sbjct: 244 NVCNS---KNLREAMRLLSVLSEEGYKPDRYVYNTIMKGYCTLNQGGEVLGVYKKMQDER 300
Query: 685 SQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMREFGIKPDLVTYTIMIDNVCNSKNLREAT 864
+PD TYN L+ L K+ S F+ M E G+ PD+ TYT +++ +C N+ EA
Sbjct: 301 IEPDNVTYNTLIFGLCKSGRWSYAKKFLGVMNEKGLSPDVFTYTSLMNGMCRGGNISEAM 360
Query: 865 RLL 873
LL
Sbjct: 361 ALL 363
Score = 65.5 bits (158), Expect = 3e-08
Identities = 40/141 (28%), Positives = 69/141 (48%)
Frame = +1
Query: 472 PNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLCGCGREEHA 651
P+ TY+TL+ + SLS+V+ + M G P ++ + + ++C A
Sbjct: 198 PDEHTYNTLVKHLVKN---RSLSSVNCFVKDMREFGVKPTLITYTIMIDNVCNSKNLREA 254
Query: 652 IELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMREFGIKPDLVTYTIMIDN 831
+ L+ LS + +PD Y YN +++ V K M++ I+PD VTY +I
Sbjct: 255 MRLLSVLSEEGYKPDRYVYNTIMKGYCTLNQGGEVLGVYKKMQDERIEPDNVTYNTLIFG 314
Query: 832 VCNSKNLREATRLLGVLSEEG 894
+C S A + LGV++E+G
Sbjct: 315 LCKSGRWSYAKKFLGVMNEKG 335
Score = 58.2 bits (139), Expect = 4e-06
Identities = 31/145 (21%), Positives = 68/145 (46%)
Frame = +1
Query: 448 VKKHPAFCPNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLC 627
V + P+R+ Y+T++ C+ + V++ M + P+ V+ + + LC
Sbjct: 260 VLSEEGYKPDRYVYNTIMKGYCTLNQGGEVLGVYK---KMQDERIEPDNVTYNTLIFGLC 316
Query: 628 GCGREEHAIELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMREFGIKPDLV 807
GR +A + + ++ K PD +TY L+ + + ++S +++M KP+
Sbjct: 317 KSGRWSYAKKFLGVMNEKGLSPDVFTYTSLMNGMCRGGNISEAMALLEEMESRECKPNSH 376
Query: 808 TYTIMIDNVCNSKNLREATRLLGVL 882
TY ++ +C + L +A + V+
Sbjct: 377 TYNTLLQGLCKAGMLDKAVEVFQVM 401
>ref|XP_004232547.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17670-like [Solanum lycopersicum]
Length = 469
Score = 294 bits (752), Expect = 3e-77
Identities = 162/275 (58%), Positives = 195/275 (70%), Gaps = 6/275 (2%)
Frame = +1
Query: 88 MGKIPPAFRRAASQSPLSTLLKPNTSAALQEQIPSPISN---FPTQKKSSKKNPIKSDDS 258
MGK+PP+ R A ++TL+K T + P P S +P + +S KK P S
Sbjct: 1 MGKLPPSLRSA--NFAVNTLIK--TPSPSPSPSPPPTSKPHYYPKKSQSPKKKPT----S 52
Query: 259 TTKSNVPS--ITFESPNLSEAKSLFNSLISSTKNTPSDSSFYNXXXXXXXXXXXXXXXXX 432
T+ +PS + F+S +LS+AK+LFNSLISST+N +D+ FYN
Sbjct: 53 ITEPQLPSSILAFDSTSLSDAKTLFNSLISSTRNPSTDNKFYNAVLQSFSSNSTLQDSIF 112
Query: 433 XFNHMVKKHPAFCPNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVA 612
NHM+K HP F P+RFTYH LLVQSC S D SLS VH++LNLMT NGFPPN+VSTD+A
Sbjct: 113 FLNHMIKVHPPFSPDRFTYHVLLVQSCKSVDL-SLSPVHQVLNLMTTNGFPPNKVSTDIA 171
Query: 613 VRSLCGCGREEHAIELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMRE-FG 789
VR+LC G EE AIEL+KELS+K+S PDTYTYNF++RHL KNR LST+N FIK+MRE F
Sbjct: 172 VRTLCSSGHEEQAIELVKELSSKDSPPDTYTYNFIIRHLCKNRPLSTMNNFIKEMREGFD 231
Query: 790 IKPDLVTYTIMIDNVCNSKNLREATRLLGVLSEEG 894
IKPDLVTYTIMIDNVCNSKNLREATRLLGVLSEEG
Sbjct: 232 IKPDLVTYTIMIDNVCNSKNLREATRLLGVLSEEG 266
Score = 61.2 bits (147), Expect = 5e-07
Identities = 42/184 (22%), Positives = 80/184 (43%)
Frame = +1
Query: 343 STKNTPSDSSFYNXXXXXXXXXXXXXXXXXXFNHMVKKHPAFCPNRFTYHTLLVQSCSSP 522
S+K++P D+ YN M ++ P+ TY ++ C+S
Sbjct: 192 SSKDSPPDTYTYNFIIRHLCKNRPLSTMNNFIKEM-REGFDIKPDLVTYTIMIDNVCNS- 249
Query: 523 DEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLCGCGREEHAIELIKELSAKNSQPDTY 702
++L R+L +++ G+ P+ + ++ C + + + K++ + +PD
Sbjct: 250 --KNLREATRLLGVLSEEGYKPDCYVYNTIMKGYCMLSQGGEVLGVYKKMQEEGVKPDLV 307
Query: 703 TYNFLVRHLVKNRSLSTVNCFIKDMREFGIKPDLVTYTIMIDNVCNSKNLREATRLLGVL 882
TYN L+ L K+ + F+ M E G PD VTYT +++ +C + A LL +
Sbjct: 308 TYNTLIYGLSKSGRVKDAKKFLNVMMEEGHVPDAVTYTSLMNGMCREADPLGAVALLEKM 367
Query: 883 SEEG 894
G
Sbjct: 368 EARG 371
>ref|XP_006340813.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17670-like [Solanum tuberosum]
Length = 467
Score = 288 bits (737), Expect = 2e-75
Identities = 159/273 (58%), Positives = 193/273 (70%), Gaps = 4/273 (1%)
Frame = +1
Query: 88 MGKIPPAFRRAASQSPLSTLLK-PNTSAALQEQIPSPISNFPTQKKSSKKNPIKSDDSTT 264
MGK+PP+ R A ++TL+K P+ S + P P S P + P K S T
Sbjct: 1 MGKLPPSLRSA--NFAVNTLIKTPSPSPS-----PPPTSK-PHYYPKKSQTPKKKLTSNT 52
Query: 265 KSNVPS--ITFESPNLSEAKSLFNSLISSTKNTPSDSSFYNXXXXXXXXXXXXXXXXXXF 438
+ +PS + F+S +LS+AK+LFNSLIS+++N SD+ FYN
Sbjct: 53 EPQLPSSIVAFDSTSLSDAKTLFNSLISNSRNPTSDNKFYNAVLQSFSSNSTLQDSIFFL 112
Query: 439 NHMVKKHPAFCPNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVR 618
NH++K HP F P+RFTYH LL+QSC S D SLS VH++LNLMT NGFPPN+VSTD+AVR
Sbjct: 113 NHVIKVHPPFSPDRFTYHVLLIQSCKSVDL-SLSPVHQVLNLMTTNGFPPNKVSTDIAVR 171
Query: 619 SLCGCGREEHAIELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMRE-FGIK 795
+LC G EE AIEL+KELS+K+S PDTYTYNF+VRHL KNR LST+N FIK+MRE F IK
Sbjct: 172 TLCSSGHEEQAIELVKELSSKDSPPDTYTYNFIVRHLCKNRPLSTMNNFIKEMREGFDIK 231
Query: 796 PDLVTYTIMIDNVCNSKNLREATRLLGVLSEEG 894
PDLVTYTIMIDNVCNSKNLREATRLLGVLSEEG
Sbjct: 232 PDLVTYTIMIDNVCNSKNLREATRLLGVLSEEG 264
Score = 61.2 bits (147), Expect = 5e-07
Identities = 42/184 (22%), Positives = 80/184 (43%)
Frame = +1
Query: 343 STKNTPSDSSFYNXXXXXXXXXXXXXXXXXXFNHMVKKHPAFCPNRFTYHTLLVQSCSSP 522
S+K++P D+ YN M ++ P+ TY ++ C+S
Sbjct: 190 SSKDSPPDTYTYNFIVRHLCKNRPLSTMNNFIKEM-REGFDIKPDLVTYTIMIDNVCNS- 247
Query: 523 DEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLCGCGREEHAIELIKELSAKNSQPDTY 702
++L R+L +++ G+ P+ + ++ C + + + K++ + +PD
Sbjct: 248 --KNLREATRLLGVLSEEGYKPDCYVYNTIMKGYCMLSQGGEVLGVYKKMQEEGVKPDLV 305
Query: 703 TYNFLVRHLVKNRSLSTVNCFIKDMREFGIKPDLVTYTIMIDNVCNSKNLREATRLLGVL 882
TYN L+ L K+ + F+ M E G PD VTYT +++ +C + A LL +
Sbjct: 306 TYNTLIYGLSKSGRVKDAKKFLNVMMEEGHVPDAVTYTSLMNGMCREADPLGAVALLEKM 365
Query: 883 SEEG 894
G
Sbjct: 366 EARG 369
>emb|CAN69960.1| hypothetical protein VITISV_032887 [Vitis vinifera]
Length = 472
Score = 247 bits (631), Expect = 4e-63
Identities = 141/276 (51%), Positives = 176/276 (63%), Gaps = 7/276 (2%)
Frame = +1
Query: 88 MGKIPPAFRRAASQSPLSTLLKPNTSAALQEQIPSPISNFPTQKKSSKKNPIKSDDSTTK 267
MGKIPP+FR S P++TLLK N A L +Q S + P + K + T K
Sbjct: 1 MGKIPPSFR--TSTVPVTTLLK-NPPAVLPKQ--STVLETPQKPHHFPKKRPQPSGKTKK 55
Query: 268 SNVP------SITFESPNLSEAKSLFNSLISSTKNTPSDSSFYNXXXXXXXXXXXXXXXX 429
+ P + F SPNL +AK LF S I++T TP D F+N
Sbjct: 56 TRTPIEDPKSPVIFNSPNLLDAKKLFAS-ITTTSTTPLDLRFHNALLQSYSSISTVNDSI 114
Query: 430 XXFNHMVKKHPAFCPNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDV 609
HM+K P+F P R TYH LL QSC SP+ + LS VH+ LNLM +GFPP++V+TD+
Sbjct: 115 SFLRHMIKSQPSFSPERSTYHILLSQSCKSPNSD-LSAVHQTLNLMVTHGFPPDRVTTDI 173
Query: 610 AVRSLCGCGREEHAIELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMR-EF 786
AVRSLC GREEHAIEL+KELS K+S PD++TYNF++RHL K R+LSTV FI +++ F
Sbjct: 174 AVRSLCSAGREEHAIELVKELSLKHSPPDSFTYNFIIRHLCKTRALSTVYNFIDELQNSF 233
Query: 787 GIKPDLVTYTIMIDNVCNSKNLREATRLLGVLSEEG 894
+KPDLVTYTI+IDNVCN KNLREATRLL VL E G
Sbjct: 234 QLKPDLVTYTILIDNVCNGKNLREATRLLEVLGEAG 269
Score = 65.1 bits (157), Expect = 3e-08
Identities = 46/184 (25%), Positives = 78/184 (42%)
Frame = +1
Query: 343 STKNTPSDSSFYNXXXXXXXXXXXXXXXXXXFNHMVKKHPAFCPNRFTYHTLLVQSCSSP 522
S K++P DS YN + + P+ TY L+ C+
Sbjct: 195 SLKHSPPDSFTYNFIIRHLCKTRALSTVYNFIDELQNSFQ-LKPDLVTYTILIDNVCNG- 252
Query: 523 DEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLCGCGREEHAIELIKELSAKNSQPDTY 702
++L R+L ++ GF P+ + ++ C + AI + K++ + +PD
Sbjct: 253 --KNLREATRLLEVLGEAGFKPDCYVYNTIMKGYCILDKGSEAIGVYKKMKEEGVEPDLV 310
Query: 703 TYNFLVRHLVKNRSLSTVNCFIKDMREFGIKPDLVTYTIMIDNVCNSKNLREATRLLGVL 882
TYN L+ L K+ + F+ M E G PD VTYT +++ +C N A LL +
Sbjct: 311 TYNTLIFGLSKSGRVKEARKFLDIMAEMGHFPDAVTYTSLMNGLCREGNALGALALLEEM 370
Query: 883 SEEG 894
+G
Sbjct: 371 EAKG 374
>gb|EOX90708.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
cacao]
Length = 464
Score = 243 bits (620), Expect = 7e-62
Identities = 138/270 (51%), Positives = 176/270 (65%), Gaps = 1/270 (0%)
Frame = +1
Query: 88 MGKIPPAFRRAASQSPLSTLLKPNTSAALQEQIPSPISNFPTQKKSSKKNPIKSDDSTTK 267
MGKIPP+FR A S S + + +A IP T+K+ S+ + K+ ++
Sbjct: 1 MGKIPPSFRPAISNSLIKRQPLESPTA-----IPHQFPEKTTKKRPSQHS--KTAQASLG 53
Query: 268 SNVPSITFESPNLSEAKSLFNSLISSTKNTPSDSSFYNXXXXXXXXXXXXXXXXXXFNHM 447
S F+SP+LS AK +FNS++ +TK P D F+N +HM
Sbjct: 54 SRKAEPLFKSPDLSSAKKVFNSIVVTTK-APIDLRFHNTLLQSYASVSTVNDSISFLHHM 112
Query: 448 VKKHPAFCPNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLC 627
VK HP+F P+R TYH LL QSC +PD SLS V + LNLM NG PNQV+TDVA+RSLC
Sbjct: 113 VKAHPSFSPDRSTYHILLSQSCKAPDS-SLSPVRQTLNLMVTNGLKPNQVTTDVAIRSLC 171
Query: 628 GCGREEHAIELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMR-EFGIKPDL 804
GR +HA+EL+KELS K+S PD +T+NFLV++L K R+LSTV FI DM+ FGIKPDL
Sbjct: 172 EAGRIDHAVELVKELSLKHSPPDNFTFNFLVKNLCKCRTLSTVYGFIDDMKSSFGIKPDL 231
Query: 805 VTYTIMIDNVCNSKNLREATRLLGVLSEEG 894
VTYTI+IDNVCNSKNLREA RL+GVL+E G
Sbjct: 232 VTYTILIDNVCNSKNLREAMRLVGVLNESG 261
Score = 70.1 bits (170), Expect = 1e-09
Identities = 54/220 (24%), Positives = 96/220 (43%)
Frame = +1
Query: 235 NPIKSDDSTTKSNVPSITFESPNLSEAKSLFNSLISSTKNTPSDSSFYNXXXXXXXXXXX 414
N +K + TT + S+ E+ + A L L S K++P D+ +N
Sbjct: 154 NGLKPNQVTTDVAIRSLC-EAGRIDHAVELVKEL--SLKHSPPDNFTFNFLVKNLCKCRT 210
Query: 415 XXXXXXXFNHMVKKHPAFCPNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQ 594
+ M K P+ TY L+ C+S ++L R++ ++ +GF P+
Sbjct: 211 LSTVYGFIDDM-KSSFGIKPDLVTYTILIDNVCNS---KNLREAMRLVGVLNESGFKPDC 266
Query: 595 VSTDVAVRSLCGCGREEHAIELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKD 774
+ ++ C + IE+ K++ + +PD TYN L+ L K+ + ++
Sbjct: 267 FVYNTIMKGYCMLSKGSEIIEVYKKMKEEGVEPDLVTYNTLIFGLSKSGRVKEARKYLDI 326
Query: 775 MREFGIKPDLVTYTIMIDNVCNSKNLREATRLLGVLSEEG 894
M E G PD VTYT +++ +C N A LL + +G
Sbjct: 327 MVESGHFPDAVTYTSLMNGMCREGNALGAVLLLEEMERKG 366
>ref|XP_006467049.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17670-like isoform X1 [Citrus sinensis]
gi|568825365|ref|XP_006467050.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g17670-like isoform X2 [Citrus sinensis]
gi|568825367|ref|XP_006467051.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g17670-like isoform X3 [Citrus sinensis]
Length = 465
Score = 233 bits (595), Expect = 6e-59
Identities = 131/270 (48%), Positives = 169/270 (62%), Gaps = 1/270 (0%)
Frame = +1
Query: 88 MGKIPPAFRRAASQSPLSTLLKPNTSAALQEQIPSPISNFPTQKKSSKKNPIKSDDSTTK 267
MGKIPPA R A S + L L P + AL+ N KKS+ N S K
Sbjct: 1 MGKIPPALRTAISSNNL--LKTPAPTQALKSPHQFLYKNENPSKKSAAANK-----SEKK 53
Query: 268 SNVPSITFESPNLSEAKSLFNSLISSTKNTPSDSSFYNXXXXXXXXXXXXXXXXXXFNHM 447
+ P++ F+SP LSEA +FNSL+++T TP D +F+N NHM
Sbjct: 54 TPAPAVIFKSPELSEAIKIFNSLVTATMQTPRDRTFHNSLLQSYASISTVDDSISLLNHM 113
Query: 448 VKKHPAFCPNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLC 627
+K +P+F P+R TYH LL QSC +PD S S++ + L+LMT NG+PPNQ +TD+AVRSLC
Sbjct: 114 IKANPSFNPDRSTYHILLAQSCQAPDN-SFSSIRKTLSLMTTNGYPPNQGTTDIAVRSLC 172
Query: 628 GCGREEHAIELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMR-EFGIKPDL 804
R + AIEL+K LS + PD +TYNFLV+ L K RSL+TV F+ MR GIKP+L
Sbjct: 173 SVNRLDDAIELVKGLSLNSFPPDIFTYNFLVKCLCKCRSLTTVYNFVDQMRASLGIKPNL 232
Query: 805 VTYTIMIDNVCNSKNLREATRLLGVLSEEG 894
VTYTI+IDNVCN+KNLREA RL+ LS+ G
Sbjct: 233 VTYTILIDNVCNTKNLREAMRLVSALSDSG 262
Score = 65.5 bits (158), Expect = 3e-08
Identities = 38/141 (26%), Positives = 69/141 (48%)
Frame = +1
Query: 472 PNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLCGCGREEHA 651
PN TY L+ C++ ++L R+++ ++++GF P+ + ++ C R
Sbjct: 230 PNLVTYTILIDNVCNT---KNLREAMRLVSALSDSGFKPDCFVYNTIMKGYCNLSRGGEV 286
Query: 652 IELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMREFGIKPDLVTYTIMIDN 831
I + ++ + +PD TYN L+ L K + F+K M E G PD VTYT +++
Sbjct: 287 IGVYNKMKEEGVEPDLVTYNTLIFGLSKCGRVGEAKKFLKIMVEAGFLPDAVTYTSLMNG 346
Query: 832 VCNSKNLREATRLLGVLSEEG 894
+C + A LL + +G
Sbjct: 347 MCREGDALGALALLEEMEGKG 367
Score = 63.5 bits (153), Expect = 1e-07
Identities = 40/145 (27%), Positives = 70/145 (48%), Gaps = 1/145 (0%)
Frame = +1
Query: 463 AFCPNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNN-GFPPNQVSTDVAVRSLCGCGR 639
+F P+ FTY+ L+ C SL+ V+ ++ M + G PN V+ + + ++C
Sbjct: 191 SFPPDIFTYNFLVKCLCKC---RSLTTVYNFVDQMRASLGIKPNLVTYTILIDNVCNTKN 247
Query: 640 EEHAIELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMREFGIKPDLVTYTI 819
A+ L+ LS +PD + YN +++ V M+E G++PDLVTY
Sbjct: 248 LREAMRLVSALSDSGFKPDCFVYNTIMKGYCNLSRGGEVIGVYNKMKEEGVEPDLVTYNT 307
Query: 820 MIDNVCNSKNLREATRLLGVLSEEG 894
+I + + EA + L ++ E G
Sbjct: 308 LIFGLSKCGRVGEAKKFLKIMVEAG 332
Score = 58.5 bits (140), Expect = 3e-06
Identities = 48/189 (25%), Positives = 78/189 (41%), Gaps = 2/189 (1%)
Frame = +1
Query: 301 NLSEAKSLFNSLISSTKNTPSDSSFYNXXXXXXXXXXXXXXXXXXFNHMVKKHPAFCPNR 480
NL EA L ++L S D YN +N M K P+
Sbjct: 247 NLREAMRLVSAL--SDSGFKPDCFVYNTIMKGYCNLSRGGEVIGVYNKM--KEEGVEPDL 302
Query: 481 FTYHTLL--VQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLCGCGREEHAI 654
TY+TL+ + C E + L +M GF P+ V+ + +C G A+
Sbjct: 303 VTYNTLIFGLSKCGRVGEAK-----KFLKIMVEAGFLPDAVTYTSLMNGMCREGDALGAL 357
Query: 655 ELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMREFGIKPDLVTYTIMIDNV 834
L++E+ K P++ TYN L+ L K+R + + M+E G+K + Y ++ +
Sbjct: 358 ALLEEMEGKGCSPNSCTYNTLLYGLCKSRLMEKGIELYRAMKEGGVKLETAAYATLVRAL 417
Query: 835 CNSKNLREA 861
C + EA
Sbjct: 418 CRHGKVAEA 426
>ref|XP_006425315.1| hypothetical protein CICLE_v10025555mg [Citrus clementina]
gi|557527305|gb|ESR38555.1| hypothetical protein
CICLE_v10025555mg [Citrus clementina]
Length = 465
Score = 233 bits (593), Expect = 9e-59
Identities = 127/270 (47%), Positives = 170/270 (62%), Gaps = 1/270 (0%)
Frame = +1
Query: 88 MGKIPPAFRRAASQSPLSTLLKPNTSAALQEQIPSPISNFPTQKKSSKKNPIKSDDSTTK 267
MGKIPPA R A S + L + A + + SP F + ++ K ++ S K
Sbjct: 1 MGKIPPALRTAISSNTL------RKTPARTQALKSP-HQFLNKNENRSKKSAAANKSEKK 53
Query: 268 SNVPSITFESPNLSEAKSLFNSLISSTKNTPSDSSFYNXXXXXXXXXXXXXXXXXXFNHM 447
+ P+ F+SP LSEA +FNSL+++T TP D +F+N NHM
Sbjct: 54 TPAPAAIFKSPELSEAIKIFNSLVTATMQTPRDRTFHNSLLQSYASISTVDDSISLLNHM 113
Query: 448 VKKHPAFCPNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLC 627
+K +P+F P+R TYH LL QSC +PD S S++ + L+LMT NG+PPNQ +TD+AVRSLC
Sbjct: 114 IKANPSFNPDRSTYHILLAQSCQAPDN-SFSSIRKTLSLMTTNGYPPNQGTTDIAVRSLC 172
Query: 628 GCGREEHAIELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMR-EFGIKPDL 804
R + AIEL+K LS + PD +TYNFLV+ L K RSL+TV F+ +R FGIKP+L
Sbjct: 173 SVNRLDDAIELVKGLSLNSFPPDIFTYNFLVKCLCKCRSLTTVYNFVDQVRASFGIKPNL 232
Query: 805 VTYTIMIDNVCNSKNLREATRLLGVLSEEG 894
VTYTI+IDNVCN+KNLREA RL+ LS+ G
Sbjct: 233 VTYTILIDNVCNTKNLREAMRLVSALSDSG 262
Score = 64.7 bits (156), Expect = 4e-08
Identities = 37/141 (26%), Positives = 69/141 (48%)
Frame = +1
Query: 472 PNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLCGCGREEHA 651
PN TY L+ C++ ++L R+++ ++++GF P+ + ++ C R
Sbjct: 230 PNLVTYTILIDNVCNT---KNLREAMRLVSALSDSGFKPDCFVYNTIMKGYCNLSRGGEV 286
Query: 652 IELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMREFGIKPDLVTYTIMIDN 831
I + ++ + +PD TYN ++ L K + F+K M E G PD VTYT +++
Sbjct: 287 IGVYNKMKEEGVEPDLVTYNTMIFGLSKCGRVGEAKKFLKIMVEAGFLPDAVTYTSLMNG 346
Query: 832 VCNSKNLREATRLLGVLSEEG 894
+C + A LL + +G
Sbjct: 347 MCREGDALGALALLEEMEGKG 367
Score = 63.5 bits (153), Expect = 1e-07
Identities = 40/145 (27%), Positives = 70/145 (48%), Gaps = 1/145 (0%)
Frame = +1
Query: 463 AFCPNRFTYHTLLVQSCSSPDEESLSNVHRILN-LMTNNGFPPNQVSTDVAVRSLCGCGR 639
+F P+ FTY+ L+ C SL+ V+ ++ + + G PN V+ + + ++C
Sbjct: 191 SFPPDIFTYNFLVKCLCKC---RSLTTVYNFVDQVRASFGIKPNLVTYTILIDNVCNTKN 247
Query: 640 EEHAIELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMREFGIKPDLVTYTI 819
A+ L+ LS +PD + YN +++ V M+E G++PDLVTY
Sbjct: 248 LREAMRLVSALSDSGFKPDCFVYNTIMKGYCNLSRGGEVIGVYNKMKEEGVEPDLVTYNT 307
Query: 820 MIDNVCNSKNLREATRLLGVLSEEG 894
MI + + EA + L ++ E G
Sbjct: 308 MIFGLSKCGRVGEAKKFLKIMVEAG 332
Score = 57.8 bits (138), Expect = 5e-06
Identities = 47/189 (24%), Positives = 78/189 (41%), Gaps = 2/189 (1%)
Frame = +1
Query: 301 NLSEAKSLFNSLISSTKNTPSDSSFYNXXXXXXXXXXXXXXXXXXFNHMVKKHPAFCPNR 480
NL EA L ++L S D YN +N M K P+
Sbjct: 247 NLREAMRLVSAL--SDSGFKPDCFVYNTIMKGYCNLSRGGEVIGVYNKM--KEEGVEPDL 302
Query: 481 FTYHTLL--VQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLCGCGREEHAI 654
TY+T++ + C E + L +M GF P+ V+ + +C G A+
Sbjct: 303 VTYNTMIFGLSKCGRVGEAK-----KFLKIMVEAGFLPDAVTYTSLMNGMCREGDALGAL 357
Query: 655 ELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMREFGIKPDLVTYTIMIDNV 834
L++E+ K P++ TYN L+ L K+R + + M+E G+K + Y ++ +
Sbjct: 358 ALLEEMEGKGCSPNSCTYNTLLYGLCKSRLMEKGIELYRAMKEGGVKLETAAYATLVRAL 417
Query: 835 CNSKNLREA 861
C + EA
Sbjct: 418 CRHGKVAEA 426
>ref|XP_002267809.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g17670-like [Vitis vinifera]
Length = 458
Score = 231 bits (588), Expect = 4e-58
Identities = 132/267 (49%), Positives = 167/267 (62%), Gaps = 7/267 (2%)
Frame = +1
Query: 88 MGKIPPAFRRAASQSPLSTLLKPNTSAALQEQIPSPISNFPTQKKSSKKNPIKSDDSTTK 267
MGKIPP+FR S P++TLLK N A L +Q S + P + K + T K
Sbjct: 69 MGKIPPSFR--TSTVPVTTLLK-NPPAVLPKQ--STVLETPQKPHHFPKKRPQPSGKTKK 123
Query: 268 SNVP------SITFESPNLSEAKSLFNSLISSTKNTPSDSSFYNXXXXXXXXXXXXXXXX 429
+ P + F SPNL +AK LF S I++T TP D F+N
Sbjct: 124 TRTPIEDPKSPVIFNSPNLLDAKKLFAS-ITTTSTTPLDFRFHNALLQSYSSISTVNDSI 182
Query: 430 XXFNHMVKKHPAFCPNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDV 609
HM+K P+F P R TYH LL QSC SP+ + LS VH+ LNLM +GFPP++V+TD+
Sbjct: 183 SFLRHMIKSQPSFSPERSTYHILLSQSCKSPNSD-LSAVHQTLNLMVTHGFPPDRVTTDI 241
Query: 610 AVRSLCGCGREEHAIELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMR-EF 786
AVRSLC GREEHAIEL+KELS K+S PD++TYNF++RHL K R+LSTV FI +++ F
Sbjct: 242 AVRSLCSAGREEHAIELVKELSLKHSPPDSFTYNFIIRHLCKTRALSTVYNFIDELQNSF 301
Query: 787 GIKPDLVTYTIMIDNVCNSKNLREATR 867
+KPDLVTYTI+IDNVCN K EATR
Sbjct: 302 QLKPDLVTYTILIDNVCNGKESPEATR 328
>ref|XP_004510105.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17670-like isoform X1 [Cicer arietinum]
gi|502155526|ref|XP_004510106.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g17670-like isoform X2 [Cicer arietinum]
Length = 468
Score = 228 bits (582), Expect = 2e-57
Identities = 128/271 (47%), Positives = 168/271 (61%), Gaps = 2/271 (0%)
Frame = +1
Query: 88 MGKIPPAFRRAASQSPLSTLLKPNTSAALQEQIPSPI-SNFPTQKKSSKKNPIKSDDSTT 264
MGKIPP+FR A S L S++ P I SNFP K ++ +
Sbjct: 1 MGKIPPSFRSALSNPNLINSSSSLPSSSKPRYFPKKIPSNFP-----GKSRKLQQESQPP 55
Query: 265 KSNVPSITFESPNLSEAKSLFNSLISSTKNTPSDSSFYNXXXXXXXXXXXXXXXXXXFNH 444
K P F+SP L EAKS+FNS++ S+ N P+D F+N H
Sbjct: 56 K---PVSLFKSPCLQEAKSIFNSIVKSS-NVPNDFRFHNSLLQSYASVSTINDSIAFLRH 111
Query: 445 MVKKHPAFCPNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSL 624
M K HP+F P++ TYH LL QSC S D +LS +H+ LNLM ++G P++V+ D+AVRSL
Sbjct: 112 MTKTHPSFTPDKSTYHILLTQSCKSTDT-TLSQIHQTLNLMVSDGVSPDKVTVDLAVRSL 170
Query: 625 CGCGREEHAIELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMR-EFGIKPD 801
C GR + A+ELIKELS+K+ PD YT+NFLV+HL K +LST+ FI +MR +FG+KPD
Sbjct: 171 CSAGRMDEAVELIKELSSKHCSPDIYTFNFLVKHLCKCLTLSTLYSFIIEMRSKFGVKPD 230
Query: 802 LVTYTIMIDNVCNSKNLREATRLLGVLSEEG 894
LVT+TI+IDNVCN+KNLRE L+ VL EEG
Sbjct: 231 LVTFTILIDNVCNAKNLRETLSLMSVLDEEG 261
Score = 59.7 bits (143), Expect = 1e-06
Identities = 36/142 (25%), Positives = 72/142 (50%), Gaps = 1/142 (0%)
Frame = +1
Query: 472 PNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLCGCGREEHA 651
P+ +T++ L+ C +L + I+ + + G P+ V+ + + ++C
Sbjct: 193 PDIYTFNFLVKHLCKCLTLSTLYSF--IIEMRSKFGVKPDLVTFTILIDNVCNAKNLRET 250
Query: 652 IELIKELSAKNSQPDTYTYNFLVRHLVK-NRSLSTVNCFIKDMREFGIKPDLVTYTIMID 828
+ L+ L + + D Y YN +++ K R + + K M+E G++PDL+TY +I
Sbjct: 251 LSLMSVLDEEGFKLDCYAYNTIMKGYCKMGRGNEAIEVYNK-MKEAGVEPDLITYNTLIY 309
Query: 829 NVCNSKNLREATRLLGVLSEEG 894
+ S + EA +LL V++E+G
Sbjct: 310 GLSKSGRVMEAKKLLRVMAEKG 331
Score = 58.5 bits (140), Expect = 3e-06
Identities = 36/135 (26%), Positives = 67/135 (49%), Gaps = 1/135 (0%)
Frame = +1
Query: 472 PNRFTYHTLLVQSCSSPD-EESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLCGCGREEH 648
P+ T+ L+ C++ + E+LS +++++ GF + + + ++ C GR
Sbjct: 229 PDLVTFTILIDNVCNAKNLRETLS----LMSVLDEEGFKLDCYAYNTIMKGYCKMGRGNE 284
Query: 649 AIELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMREFGIKPDLVTYTIMID 828
AIE+ ++ +PD TYN L+ L K+ + ++ M E G PD VTYT +++
Sbjct: 285 AIEVYNKMKEAGVEPDLITYNTLIYGLSKSGRVMEAKKLLRVMAEKGHFPDEVTYTSLMN 344
Query: 829 NVCNSKNLREATRLL 873
+C + A LL
Sbjct: 345 GLCRKGEILSAIALL 359
>gb|EMJ05384.1| hypothetical protein PRUPE_ppa015299mg [Prunus persica]
Length = 464
Score = 228 bits (580), Expect = 3e-57
Identities = 127/270 (47%), Positives = 174/270 (64%), Gaps = 1/270 (0%)
Frame = +1
Query: 88 MGKIPPAFRRAASQSPLSTLLKPNTSAALQEQIPSPISNFPTQKKSSKKNPIKSDDSTTK 267
MGKIPP+ R + S S L+K +S E +FP KK++KK P + + T +
Sbjct: 1 MGKIPPSLRSSVSTS----LIKKPSSLVPNESPSHRPHHFP--KKTTKKIPPQLSEKTRE 54
Query: 268 SNVPSITFESPNLSEAKSLFNSLISSTKNTPSDSSFYNXXXXXXXXXXXXXXXXXXFNHM 447
+ F S NLS+AK +FNS++++TK P D +N FNHM
Sbjct: 55 PTFRN-PFTSANLSDAKKVFNSIVTTTK-VPLDLRVHNALLQSYASISTLNDSISLFNHM 112
Query: 448 VKKHPAFCPNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLC 627
+K HP F P+R TYH LL QSC +PD+ +L VH++LN M NGF PN+V+TD+AVRSLC
Sbjct: 113 IKTHPTFSPDRSTYHVLLSQSCKAPDQ-TLKPVHQVLNFMLTNGFSPNKVTTDIAVRSLC 171
Query: 628 GCGREEHAIELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMR-EFGIKPDL 804
A+ELIKE+S KN+ PD+YTYNFLV+ L K+ ++STV FI++ + FG+KPD+
Sbjct: 172 SSNNVGLAVELIKEMSLKNAAPDSYTYNFLVKCLCKSSAVSTVYDFIEEFKTSFGLKPDI 231
Query: 805 VTYTIMIDNVCNSKNLREATRLLGVLSEEG 894
+TYTI+IDNV N +NLREATRL+ VL++EG
Sbjct: 232 ITYTILIDNVTNRENLREATRLVDVLAKEG 261
Score = 61.6 bits (148), Expect = 4e-07
Identities = 37/141 (26%), Positives = 71/141 (50%)
Frame = +1
Query: 472 PNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLCGCGREEHA 651
P+ TY T+L+ + ++ E+L R+++++ G P+ + ++ C A
Sbjct: 229 PDIITY-TILIDNVTN--RENLREATRLVDVLAKEGIRPDCYIYNTIMKGCCTLNLGNEA 285
Query: 652 IELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMREFGIKPDLVTYTIMIDN 831
+E++K++ +PD TYN L+ L K + ++ M E G PD VTYT +++
Sbjct: 286 LEVLKKMKENGVEPDLVTYNTLIFGLSKCGRVVEAKKYLGVMVEMGHFPDAVTYTSLMNG 345
Query: 832 VCNSKNLREATRLLGVLSEEG 894
+C ++ A LL + E+G
Sbjct: 346 LCRKGDVLGALGLLEEMQEKG 366
Score = 60.1 bits (144), Expect = 1e-06
Identities = 37/142 (26%), Positives = 69/142 (48%), Gaps = 1/142 (0%)
Frame = +1
Query: 472 PNRFTYHTLLVQSCS-SPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLCGCGREEH 648
P+ + Y+T++ C+ + E+L +L M NG P+ V+ + + L CGR
Sbjct: 264 PDCYIYNTIMKGCCTLNLGNEALE----VLKKMKENGVEPDLVTYNTLIFGLSKCGRVVE 319
Query: 649 AIELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMREFGIKPDLVTYTIMID 828
A + + + PD TY L+ L + + +++M+E G +P++ TY ++
Sbjct: 320 AKKYLGVMVEMGHFPDAVTYTSLMNGLCRKGDVLGALGLLEEMQEKGCEPNVCTYNTLLH 379
Query: 829 NVCNSKNLREATRLLGVLSEEG 894
+C +K L + L GV+ E G
Sbjct: 380 GLCKAKLLEKGLDLYGVMKECG 401
Score = 57.4 bits (137), Expect = 7e-06
Identities = 37/142 (26%), Positives = 70/142 (49%), Gaps = 1/142 (0%)
Frame = +1
Query: 472 PNRFTYHTLLVQSCSSPDEESLSNVHRILN-LMTNNGFPPNQVSTDVAVRSLCGCGREEH 648
P+ +TY+ L+ C S ++S V+ + T+ G P+ ++ + + ++
Sbjct: 193 PDSYTYNFLVKCLCKS---SAVSTVYDFIEEFKTSFGLKPDIITYTILIDNVTNRENLRE 249
Query: 649 AIELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMREFGIKPDLVTYTIMID 828
A L+ L+ + +PD Y YN +++ + +K M+E G++PDLVTY +I
Sbjct: 250 ATRLVDVLAKEGIRPDCYIYNTIMKGCCTLNLGNEALEVLKKMKENGVEPDLVTYNTLIF 309
Query: 829 NVCNSKNLREATRLLGVLSEEG 894
+ + EA + LGV+ E G
Sbjct: 310 GLSKCGRVVEAKKYLGVMVEMG 331
>ref|XP_003626687.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355520709|gb|AET01163.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 501
Score = 226 bits (577), Expect = 7e-57
Identities = 127/272 (46%), Positives = 174/272 (63%), Gaps = 3/272 (1%)
Frame = +1
Query: 88 MGKIPPAFRRAASQSPLSTLLKPNTSAALQEQIPSPISNFPTQKKSSKKNPIKSDDSTTK 267
MGKIPP+FR A S L + S++L P P +FP + + + +S S ++
Sbjct: 1 MGKIPPSFRSALSNPNLI-----HRSSSLIPSSPKP-HHFPNKTRKPHQKQQQSQ-SQSQ 53
Query: 268 SNVPSITFESPNLSEAKSLFNSLISSTKNTPSDSSFYNXXXXXXXXXXXXXXXXXXFNHM 447
S P F+SPNL EAKS+FNS ++S+ N P DS F+N HM
Sbjct: 54 SPKPVSVFKSPNLQEAKSIFNSFVNSS-NAPIDSRFHNSLLQSYASISTINDSIAFLRHM 112
Query: 448 VKKHPAFCPNRFTYHTLLVQSCSSPDEE--SLSNVHRILNLMTNNGFPPNQVSTDVAVRS 621
K HP+F P++ TYH LL C S D + +LS +H+ LNLM ++G P++ + D+AVRS
Sbjct: 113 TKTHPSFSPDKSTYHILLTHCCKSTDSKYSTLSLIHQTLNLMVSDGISPDKGTVDLAVRS 172
Query: 622 LCGCGREEHAIELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMR-EFGIKP 798
LC R + A+ELIKELS+K+ PD Y+YNFLV++L K+R+LS V FI +MR +F +KP
Sbjct: 173 LCTADRVDDAVELIKELSSKHCSPDIYSYNFLVKNLCKSRTLSLVYAFIDEMRTKFDVKP 232
Query: 799 DLVTYTIMIDNVCNSKNLREATRLLGVLSEEG 894
+LVTYTI+IDNVCN+KNLREATRL+ +L EEG
Sbjct: 233 NLVTYTILIDNVCNTKNLREATRLVDILEEEG 264
Score = 67.8 bits (164), Expect = 5e-09
Identities = 40/141 (28%), Positives = 68/141 (48%)
Frame = +1
Query: 472 PNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLCGCGREEHA 651
PN TY L+ C++ ++L R+++++ GF P+ + ++ C R A
Sbjct: 232 PNLVTYTILIDNVCNT---KNLREATRLVDILEEEGFKPDCFLYNTIMKGYCMLSRGSEA 288
Query: 652 IELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMREFGIKPDLVTYTIMIDN 831
IE+ + K +PD TYN L+ L K+ +S ++ M E G PD VTYT +++
Sbjct: 289 IEVYNRMKEKGVEPDLITYNTLIFGLSKSGRVSEAKKLLRVMAEKGHFPDEVTYTSLMNG 348
Query: 832 VCNSKNLREATRLLGVLSEEG 894
+C A LL + +G
Sbjct: 349 MCRKGETLAALALLEEMEMKG 369
Score = 59.7 bits (143), Expect = 1e-06
Identities = 46/187 (24%), Positives = 78/187 (41%)
Frame = +1
Query: 301 NLSEAKSLFNSLISSTKNTPSDSSFYNXXXXXXXXXXXXXXXXXXFNHMVKKHPAFCPNR 480
NL EA L + L + D YN +N M +K P+
Sbjct: 249 NLREATRLVDIL--EEEGFKPDCFLYNTIMKGYCMLSRGSEAIEVYNRMKEKGVE--PDL 304
Query: 481 FTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLCGCGREEHAIEL 660
TY+TL+ S +S ++L +M G P++V+ + +C G A+ L
Sbjct: 305 ITYNTLIFGLSKSG---RVSEAKKLLRVMAEKGHFPDEVTYTSLMNGMCRKGETLAALAL 361
Query: 661 IKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMREFGIKPDLVTYTIMIDNVCN 840
++E+ K P+T TYN L+ L K+R M+ G+K D+ +Y + +C+
Sbjct: 362 LEEMEMKGCSPNTCTYNTLLHGLCKSRMFDKAMELYGAMKSDGLKLDMASYATFVRALCS 421
Query: 841 SKNLREA 861
+ +A
Sbjct: 422 VGRVADA 428
Score = 58.9 bits (141), Expect = 2e-06
Identities = 34/150 (22%), Positives = 67/150 (44%), Gaps = 1/150 (0%)
Frame = +1
Query: 448 VKKHPAFCPNRFTYHTLLVQSCS-SPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSL 624
+ + F P+ F Y+T++ C S E++ + N M G P+ ++ + + L
Sbjct: 259 ILEEEGFKPDCFLYNTIMKGYCMLSRGSEAIE----VYNRMKEKGVEPDLITYNTLIFGL 314
Query: 625 CGCGREEHAIELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMREFGIKPDL 804
GR A +L++ ++ K PD TY L+ + + +++M G P+
Sbjct: 315 SKSGRVSEAKKLLRVMAEKGHFPDEVTYTSLMNGMCRKGETLAALALLEEMEMKGCSPNT 374
Query: 805 VTYTIMIDNVCNSKNLREATRLLGVLSEEG 894
TY ++ +C S+ +A L G + +G
Sbjct: 375 CTYNTLLHGLCKSRMFDKAMELYGAMKSDG 404
>ref|XP_004287745.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17670-like isoform 1 [Fragaria vesca subsp. vesca]
gi|470102614|ref|XP_004287746.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g17670-like isoform 2 [Fragaria vesca subsp. vesca]
Length = 450
Score = 226 bits (575), Expect = 1e-56
Identities = 126/269 (46%), Positives = 172/269 (63%)
Frame = +1
Query: 88 MGKIPPAFRRAASQSPLSTLLKPNTSAALQEQIPSPISNFPTQKKSSKKNPIKSDDSTTK 267
MGK+ P+ R S S + KP +S+ S+ P + K P S + T+
Sbjct: 1 MGKMSPSVRSLVSTSLIK---KPPSSSP---------SHKPHTHLTGKPPPQNSGKTQTQ 48
Query: 268 SNVPSITFESPNLSEAKSLFNSLISSTKNTPSDSSFYNXXXXXXXXXXXXXXXXXXFNHM 447
++ P F SPNLS+AK +FNS+ +ST+N P D +N FNHM
Sbjct: 49 THNP---FTSPNLSDAKRVFNSIATSTRN-PLDLRRHNALLQSYAAISTVNDSIAFFNHM 104
Query: 448 VKKHPAFCPNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLC 627
+K PAF P R TYH LL QSC+ PD+ +L +VH++LN M NNGF P++V+TD+AVRSLC
Sbjct: 105 IKTQPAFSPERSTYHILLAQSCTVPDQ-TLQSVHQVLNFMVNNGFHPDKVTTDIAVRSLC 163
Query: 628 GCGREEHAIELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMREFGIKPDLV 807
G + A++++K+++ K++ PD YTYNFLV+ L K+R LSTV FI +M+ FG+KPDLV
Sbjct: 164 LAGHVDEAVQVMKQMALKSTVPDAYTYNFLVKCLCKSRVLSTVRGFIDEMKSFGLKPDLV 223
Query: 808 TYTIMIDNVCNSKNLREATRLLGVLSEEG 894
T+TIMIDNV NSKNLREATRL+ L +EG
Sbjct: 224 TFTIMIDNVANSKNLREATRLVDELEKEG 252
Score = 62.0 bits (149), Expect = 3e-07
Identities = 37/141 (26%), Positives = 69/141 (48%)
Frame = +1
Query: 472 PNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLCGCGREEHA 651
P+ +TY+ L+ C S LS V ++ M + G P+ V+ + + ++ A
Sbjct: 185 PDAYTYNFLVKCLCKS---RVLSTVRGFIDEMKSFGLKPDLVTFTIMIDNVANSKNLREA 241
Query: 652 IELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMREFGIKPDLVTYTIMIDN 831
L+ EL + +PD Y YN +++ + V +K+M+ G++PDLVTY +I
Sbjct: 242 TRLVDELEKEGFKPDCYVYNTIMKGYCMLSKGNEVVQVLKEMQAKGVEPDLVTYNTLIFG 301
Query: 832 VCNSKNLREATRLLGVLSEEG 894
+ + +A + L ++ E G
Sbjct: 302 LSKCGRVMDAKKYLWIMVEMG 322
Score = 60.8 bits (146), Expect = 6e-07
Identities = 35/141 (24%), Positives = 71/141 (50%)
Frame = +1
Query: 472 PNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLCGCGREEHA 651
P+ T+ T+++ + ++ ++L R+++ + GF P+ + ++ C +
Sbjct: 220 PDLVTF-TIMIDNVAN--SKNLREATRLVDELEKEGFKPDCYVYNTIMKGYCMLSKGNEV 276
Query: 652 IELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMREFGIKPDLVTYTIMIDN 831
++++KE+ AK +PD TYN L+ L K + ++ M E G PD VTYT +++
Sbjct: 277 VQVLKEMQAKGVEPDLVTYNTLIFGLSKCGRVMDAKKYLWIMVEMGHFPDEVTYTSLMNG 336
Query: 832 VCNSKNLREATRLLGVLSEEG 894
+C + A LL + +G
Sbjct: 337 LCRKGDALGAVALLSEMQAQG 357
>ref|XP_002521681.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223539072|gb|EEF40668.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 458
Score = 223 bits (568), Expect = 7e-56
Identities = 130/273 (47%), Positives = 168/273 (61%), Gaps = 4/273 (1%)
Frame = +1
Query: 88 MGKIPPAFRRAASQSPLSTLLKPNTSAALQEQIPSPISNFPTQKKS---SKKNPIKSDDS 258
MGK+PP+ R A S + L L KPN FP +K SKK ++
Sbjct: 1 MGKVPPSLRSAVSTTAL--LRKPNP--------------FPPPEKPHYLSKKTKLQLSQK 44
Query: 259 TTKSNVPSITFESPNLSEAKSLFNSLISSTKNTPSDSSFYNXXXXXXXXXXXXXXXXXXF 438
F+SP L+EAK +FNSLIS+T+ P D F++
Sbjct: 45 IPTPIQQKRLFKSPELNEAKEIFNSLISTTR-VPLDLRFHHSFLQSYSSISTIDDSISLL 103
Query: 439 NHMVKKHPAFCPNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVR 618
HM+K P+F P TYH LL QSC +PD +LS VH+ILNLM NNGF P QV+ D+AVR
Sbjct: 104 RHMIKTLPSFTPTISTYHILLSQSCKAPDP-TLSPVHQILNLMVNNGFMPTQVTVDIAVR 162
Query: 619 SLCGCGREEHAIELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMR-EFGIK 795
+LC G+E+ A++L+KELS K+S+PD++TYNFLV+ L K R+LS V FI +MR F ++
Sbjct: 163 ALCSAGKEDDAVKLVKELSLKHSKPDSFTYNFLVKCLCKCRALSNVYSFIDEMRSSFDLE 222
Query: 796 PDLVTYTIMIDNVCNSKNLREATRLLGVLSEEG 894
P+LVTYTI+IDNVCNSKNLREA RLLG+L E G
Sbjct: 223 PNLVTYTILIDNVCNSKNLREAMRLLGILRECG 255
Score = 68.9 bits (167), Expect = 2e-09
Identities = 41/141 (29%), Positives = 70/141 (49%)
Frame = +1
Query: 472 PNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLCGCGREEHA 651
PN TY L+ C+S ++L R+L ++ GF P+ + ++ C + A
Sbjct: 223 PNLVTYTILIDNVCNS---KNLREAMRLLGILRECGFKPDCFVYNTIMKGYCMLSKGSDA 279
Query: 652 IELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMREFGIKPDLVTYTIMIDN 831
I++ K++ + +PD TYN L+ L K +S ++K M E G PD VTYT +++
Sbjct: 280 IQVFKKMKEEGIEPDLITYNTLIFGLSKGGRVSEAKRYLKIMVESGHFPDAVTYTSLMNG 339
Query: 832 VCNSKNLREATRLLGVLSEEG 894
+C + A LL + +G
Sbjct: 340 LCRKGDALGALALLEDMEMKG 360
>ref|XP_002306437.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222855886|gb|EEE93433.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 462
Score = 219 bits (559), Expect = 8e-55
Identities = 133/271 (49%), Positives = 171/271 (63%), Gaps = 2/271 (0%)
Frame = +1
Query: 88 MGKIPPAFRRAASQSPLSTLLKPNTSAALQEQIPSPISNFPTQKKSSKKNPIKSDDSTTK 267
MGK PP+FR A S ST L NT + Q+Q FP KK +KKN K ++ T
Sbjct: 1 MGKFPPSFRSAIS----STSLIKNTPSQQQQQP----HYFP--KKLTKKNSPKPHETETP 50
Query: 268 SNVPSITFESPNLSEAKSLFNSLISSTKNTPSDS-SFYNXXXXXXXXXXXXXXXXXXFNH 444
S+ F++ +L+EAKSLFNS IS+TK D+ +N +H
Sbjct: 51 PPHKSL-FKTSSLNEAKSLFNSFISTTKAPLLDNLRLHNSFLQSYTSISTLDDSISLLDH 109
Query: 445 MVKKHPAFCPNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSL 624
MVK P+ P+R TYH LL QSC PD SLS+ ++LNLM N GF PNQ + DVA+RSL
Sbjct: 110 MVKTLPSLSPDRSTYHVLLSQSCREPDS-SLSSAQKVLNLMINKGFKPNQFTVDVAIRSL 168
Query: 625 CGCGREEHAIELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMR-EFGIKPD 801
C GR + AI L+KE S+K+S+PDT+TYNFLV+ L K+R ++V FI +M+ F IKPD
Sbjct: 169 CSAGRVDDAILLVKEFSSKHSKPDTFTYNFLVKCLCKSRIFNSVYSFIDEMKSSFDIKPD 228
Query: 802 LVTYTIMIDNVCNSKNLREATRLLGVLSEEG 894
LVTYTI+IDNVCN+KN+REA RL+ VL E G
Sbjct: 229 LVTYTILIDNVCNAKNIREADRLVAVLKECG 259
Score = 58.5 bits (140), Expect = 3e-06
Identities = 35/141 (24%), Positives = 68/141 (48%)
Frame = +1
Query: 472 PNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLCGCGREEHA 651
P+ TY L+ C++ +++ R++ ++ G P+ + ++ C + A
Sbjct: 227 PDLVTYTILIDNVCNA---KNIREADRLVAVLKECGLKPDAFLYNTIMKGYCLLNKGIEA 283
Query: 652 IELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMREFGIKPDLVTYTIMIDN 831
+ + K++ + +PD TYN L+ L K +S +K M E G PD VTYT +++
Sbjct: 284 VRIYKQMKEEGVEPDLVTYNTLIFGLSKCGRVSEAKKLLKIMVESGHFPDAVTYTSLMNG 343
Query: 832 VCNSKNLREATRLLGVLSEEG 894
+C ++ A LL + +G
Sbjct: 344 MCREGDVLGAAALLEEMELKG 364
Score = 58.5 bits (140), Expect = 3e-06
Identities = 37/149 (24%), Positives = 64/149 (42%)
Frame = +1
Query: 448 VKKHPAFCPNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLC 627
V K P+ F Y+T++ C + + V RI M G P+ V+ + + L
Sbjct: 254 VLKECGLKPDAFLYNTIMKGYCLL--NKGIEAV-RIYKQMKEEGVEPDLVTYNTLIFGLS 310
Query: 628 GCGREEHAIELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMREFGIKPDLV 807
CGR A +L+K + PD TY L+ + + + +++M G P+
Sbjct: 311 KCGRVSEAKKLLKIMVESGHFPDAVTYTSLMNGMCREGDVLGAAALLEEMELKGCSPNSC 370
Query: 808 TYTIMIDNVCNSKNLREATRLLGVLSEEG 894
TY ++ C + L + L GV+ + G
Sbjct: 371 TYNTLLHGFCKGRRLNKGVELYGVIKKGG 399
>ref|XP_006409268.1| hypothetical protein EUTSA_v10022683mg [Eutrema salsugineum]
gi|557110430|gb|ESQ50721.1| hypothetical protein
EUTSA_v10022683mg [Eutrema salsugineum]
Length = 462
Score = 214 bits (545), Expect = 3e-53
Identities = 129/270 (47%), Positives = 163/270 (60%), Gaps = 1/270 (0%)
Frame = +1
Query: 88 MGKIPPAFRRAASQSPLSTLLKPNTSAALQEQIPSPISNFPTQKKSSKKNPIKSDDSTTK 267
MGKIP +FR S + L+K TS L P N +++S K + S
Sbjct: 1 MGKIPSSFRSMTS----THLVKKPTSCPLAP--PRDPRNRIARRESVKISHHTDQVSREP 54
Query: 268 SNVPSITFESPNLSEAKSLFNSLISSTKNTPSDSSFYNXXXXXXXXXXXXXXXXXXFNHM 447
P F++P+LS+AKSLFNS I++T P D F+N F H+
Sbjct: 55 LRNP---FKTPDLSDAKSLFNS-IAATSRIPLDLKFHNSVLQSYASIAAVDDTVKLFLHI 110
Query: 448 VKKHPAFCPNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLC 627
+K P F P T+H LL +C +PD SLSNVH +LNLM NNG PNQV+TD+AVRSLC
Sbjct: 111 LKSQPGFSPEHSTFHILLSHACRAPDS-SLSNVHLVLNLMVNNGVAPNQVTTDIAVRSLC 169
Query: 628 GCGREEHAIELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMRE-FGIKPDL 804
GR A++LIKELS +S PDTYTYNFL++HL K SL V FI +M+E F +KPDL
Sbjct: 170 ESGRISEAMDLIKELSKNHSPPDTYTYNFLLKHLCKCGSLDVVYEFIDEMKETFEVKPDL 229
Query: 805 VTYTIMIDNVCNSKNLREATRLLGVLSEEG 894
V+YTI+IDNVCNSKNLREA RL+ L + G
Sbjct: 230 VSYTILIDNVCNSKNLREAMRLVSALGDAG 259
Score = 69.7 bits (169), Expect = 1e-09
Identities = 58/235 (24%), Positives = 101/235 (42%)
Frame = +1
Query: 190 SPISNFPTQKKSSKKNPIKSDDSTTKSNVPSITFESPNLSEAKSLFNSLISSTKNTPSDS 369
S +SN N + + TT V S+ ES +SEA L L S ++P D+
Sbjct: 137 SSLSNVHLVLNLMVNNGVAPNQVTTDIAVRSLC-ESGRISEAMDLIKEL--SKNHSPPDT 193
Query: 370 SFYNXXXXXXXXXXXXXXXXXXFNHMVKKHPAFCPNRFTYHTLLVQSCSSPDEESLSNVH 549
YN + M K+ P+ +Y L+ C+S ++L
Sbjct: 194 YTYNFLLKHLCKCGSLDVVYEFIDEM-KETFEVKPDLVSYTILIDNVCNS---KNLREAM 249
Query: 550 RILNLMTNNGFPPNQVSTDVAVRSLCGCGREEHAIELIKELSAKNSQPDTYTYNFLVRHL 729
R+++ + + GF P+ + ++ C + AI + K++ + +PD TYN L+ L
Sbjct: 250 RLVSALGDAGFKPDCFLYNTIMKGFCTLSKGSEAIIVYKKMKEEGVEPDRITYNTLIFGL 309
Query: 730 VKNRSLSTVNCFIKDMREFGIKPDLVTYTIMIDNVCNSKNLREATRLLGVLSEEG 894
K+ + +++ M E G +PD VTYT +++ +C A LL + G
Sbjct: 310 SKSGRVEEARKYLQTMVEAGYEPDAVTYTSLMNGMCRKGASLGALSLLEEMEARG 364
>ref|XP_002884075.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297329915|gb|EFH60334.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 462
Score = 214 bits (545), Expect = 3e-53
Identities = 123/272 (45%), Positives = 170/272 (62%), Gaps = 3/272 (1%)
Frame = +1
Query: 88 MGKIPPAFRRAASQSPLSTLLKPNTSAALQEQIPSPISNFPTQKKSSKKNPIKSDDSTTK 267
MGK+P +FR P + L+K T + P+P +F + +++ ++ K ++T
Sbjct: 1 MGKVPSSFRAM----PANLLVKKPTPSP-----PAPPRDF--RNRAAVRDSTKLPENTQA 49
Query: 268 SNVPSIT--FESPNLSEAKSLFNSLISSTKNTPSDSSFYNXXXXXXXXXXXXXXXXXXFN 441
PS+ F+SPNLS+AKSLFNS I++T P D F+N F
Sbjct: 50 PREPSLRNPFKSPNLSDAKSLFNS-IAATSRIPLDLKFHNSVLQSYASIAAVDDTVKLFQ 108
Query: 442 HMVKKHPAFCPNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRS 621
H++K P F P R T+ LL +C +PD S+SNVHR+LNLM NNG P+QV+TD+AVRS
Sbjct: 109 HILKSQPNFRPGRSTFLILLSHACRAPDS-SISNVHRVLNLMVNNGLEPDQVTTDIAVRS 167
Query: 622 LCGCGREEHAIELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMR-EFGIKP 798
LC GR + A +L+KEL+ K+S PDTYTYNFL++HL K + L V F+ +MR +F +KP
Sbjct: 168 LCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKP 227
Query: 799 DLVTYTIMIDNVCNSKNLREATRLLGVLSEEG 894
DLV++TI+IDNVCNSKNLREA L+ L G
Sbjct: 228 DLVSFTILIDNVCNSKNLREAMYLVSKLGNAG 259
Score = 68.9 bits (167), Expect = 2e-09
Identities = 56/235 (23%), Positives = 99/235 (42%)
Frame = +1
Query: 190 SPISNFPTQKKSSKKNPIKSDDSTTKSNVPSITFESPNLSEAKSLFNSLISSTKNTPSDS 369
S ISN N ++ D TT V S+ E+ + EAK L L + K++P D+
Sbjct: 137 SSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLC-ETGRVDEAKDLMKEL--TEKHSPPDT 193
Query: 370 SFYNXXXXXXXXXXXXXXXXXXFNHMVKKHPAFCPNRFTYHTLLVQSCSSPDEESLSNVH 549
YN + M P+ ++ L+ C+S ++L
Sbjct: 194 YTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVK-PDLVSFTILIDNVCNS---KNLREAM 249
Query: 550 RILNLMTNNGFPPNQVSTDVAVRSLCGCGREEHAIELIKELSAKNSQPDTYTYNFLVRHL 729
+++ + N GF P+ + ++ C + AI + K++ + +PD TYN L+ L
Sbjct: 250 YLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAIGVYKKMKEEGVEPDQITYNTLIYGL 309
Query: 730 VKNRSLSTVNCFIKDMREFGIKPDLVTYTIMIDNVCNSKNLREATRLLGVLSEEG 894
K+ + ++K M + G +PD TYT +++ +C A LL + G
Sbjct: 310 SKSGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARG 364
>ref|NP_973481.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330251569|gb|AEC06663.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 349
Score = 210 bits (534), Expect = 7e-52
Identities = 122/272 (44%), Positives = 166/272 (61%), Gaps = 3/272 (1%)
Frame = +1
Query: 88 MGKIPPAFRRAASQSPLSTLLKPNTSAALQEQIPSPISNFPTQKKSSKKNPIKSDDSTTK 267
MGK+P +FR P + L++ T + P+P +F + + + K +T
Sbjct: 1 MGKVPSSFR----SMPANLLVRKTTPSP-----PAPPRDF-RNRTAVGGDSAKLPQNTQA 50
Query: 268 SNVPSIT--FESPNLSEAKSLFNSLISSTKNTPSDSSFYNXXXXXXXXXXXXXXXXXXFN 441
PS+ F+SPNLS+AKSLFNS I++T P D F+N F
Sbjct: 51 PREPSLRNPFKSPNLSDAKSLFNS-IAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQ 109
Query: 442 HMVKKHPAFCPNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRS 621
H++K P F P R T+ LL +C +PD S+SNVHR+LNLM NNG P+QV+TD+AVRS
Sbjct: 110 HILKSQPNFRPGRSTFLILLSHACRAPDS-SISNVHRVLNLMVNNGLEPDQVTTDIAVRS 168
Query: 622 LCGCGREEHAIELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMR-EFGIKP 798
LC GR + A +L+KEL+ K+S PDTYTYNFL++HL K + L V F+ +MR +F +KP
Sbjct: 169 LCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKP 228
Query: 799 DLVTYTIMIDNVCNSKNLREATRLLGVLSEEG 894
DLV++TI+IDNVCNSKNLREA L+ L G
Sbjct: 229 DLVSFTILIDNVCNSKNLREAMYLVSKLGNAG 260
Score = 65.1 bits (157), Expect = 3e-08
Identities = 51/216 (23%), Positives = 93/216 (43%)
Frame = +1
Query: 190 SPISNFPTQKKSSKKNPIKSDDSTTKSNVPSITFESPNLSEAKSLFNSLISSTKNTPSDS 369
S ISN N ++ D TT V S+ E+ + EAK L L + K++P D+
Sbjct: 138 SSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLC-ETGRVDEAKDLMKEL--TEKHSPPDT 194
Query: 370 SFYNXXXXXXXXXXXXXXXXXXFNHMVKKHPAFCPNRFTYHTLLVQSCSSPDEESLSNVH 549
YN + M P+ ++ L+ C+S ++L
Sbjct: 195 YTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVK-PDLVSFTILIDNVCNS---KNLREAM 250
Query: 550 RILNLMTNNGFPPNQVSTDVAVRSLCGCGREEHAIELIKELSAKNSQPDTYTYNFLVRHL 729
+++ + N GF P+ + ++ C + A+ + K++ + +PD TYN L+ L
Sbjct: 251 YLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGL 310
Query: 730 VKNRSLSTVNCFIKDMREFGIKPDLVTYTIMIDNVC 837
K + ++K M + G +PD TYT +++ +C
Sbjct: 311 SKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMC 346
>ref|NP_565422.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75146596|sp|Q84J71.1|PP161_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g17670 gi|28393395|gb|AAO42121.1| unknown protein
[Arabidopsis thaliana] gi|28973597|gb|AAO64123.1|
unknown protein [Arabidopsis thaliana]
gi|330251570|gb|AEC06664.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 463
Score = 210 bits (534), Expect = 7e-52
Identities = 122/272 (44%), Positives = 166/272 (61%), Gaps = 3/272 (1%)
Frame = +1
Query: 88 MGKIPPAFRRAASQSPLSTLLKPNTSAALQEQIPSPISNFPTQKKSSKKNPIKSDDSTTK 267
MGK+P +FR P + L++ T + P+P +F + + + K +T
Sbjct: 1 MGKVPSSFR----SMPANLLVRKTTPSP-----PAPPRDF-RNRTAVGGDSAKLPQNTQA 50
Query: 268 SNVPSIT--FESPNLSEAKSLFNSLISSTKNTPSDSSFYNXXXXXXXXXXXXXXXXXXFN 441
PS+ F+SPNLS+AKSLFNS I++T P D F+N F
Sbjct: 51 PREPSLRNPFKSPNLSDAKSLFNS-IAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQ 109
Query: 442 HMVKKHPAFCPNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRS 621
H++K P F P R T+ LL +C +PD S+SNVHR+LNLM NNG P+QV+TD+AVRS
Sbjct: 110 HILKSQPNFRPGRSTFLILLSHACRAPDS-SISNVHRVLNLMVNNGLEPDQVTTDIAVRS 168
Query: 622 LCGCGREEHAIELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMR-EFGIKP 798
LC GR + A +L+KEL+ K+S PDTYTYNFL++HL K + L V F+ +MR +F +KP
Sbjct: 169 LCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKP 228
Query: 799 DLVTYTIMIDNVCNSKNLREATRLLGVLSEEG 894
DLV++TI+IDNVCNSKNLREA L+ L G
Sbjct: 229 DLVSFTILIDNVCNSKNLREAMYLVSKLGNAG 260
Score = 67.0 bits (162), Expect = 9e-09
Identities = 55/235 (23%), Positives = 98/235 (41%)
Frame = +1
Query: 190 SPISNFPTQKKSSKKNPIKSDDSTTKSNVPSITFESPNLSEAKSLFNSLISSTKNTPSDS 369
S ISN N ++ D TT V S+ E+ + EAK L L + K++P D+
Sbjct: 138 SSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLC-ETGRVDEAKDLMKEL--TEKHSPPDT 194
Query: 370 SFYNXXXXXXXXXXXXXXXXXXFNHMVKKHPAFCPNRFTYHTLLVQSCSSPDEESLSNVH 549
YN + M P+ ++ L+ C+S ++L
Sbjct: 195 YTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVK-PDLVSFTILIDNVCNS---KNLREAM 250
Query: 550 RILNLMTNNGFPPNQVSTDVAVRSLCGCGREEHAIELIKELSAKNSQPDTYTYNFLVRHL 729
+++ + N GF P+ + ++ C + A+ + K++ + +PD TYN L+ L
Sbjct: 251 YLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGL 310
Query: 730 VKNRSLSTVNCFIKDMREFGIKPDLVTYTIMIDNVCNSKNLREATRLLGVLSEEG 894
K + ++K M + G +PD TYT +++ +C A LL + G
Sbjct: 311 SKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARG 365
>gb|AAM62704.1| unknown [Arabidopsis thaliana]
Length = 463
Score = 209 bits (532), Expect = 1e-51
Identities = 122/272 (44%), Positives = 166/272 (61%), Gaps = 3/272 (1%)
Frame = +1
Query: 88 MGKIPPAFRRAASQSPLSTLLKPNTSAALQEQIPSPISNFPTQKKSSKKNPIKSDDSTTK 267
MGK+P +FR P + L++ T + P+P +F + + + K +T
Sbjct: 1 MGKVPSSFRSI----PANLLVRKTTPSP-----PAPPRDF-RNRTAVGGDSAKLPHNTQA 50
Query: 268 SNVPSIT--FESPNLSEAKSLFNSLISSTKNTPSDSSFYNXXXXXXXXXXXXXXXXXXFN 441
PS+ F+SPNLS+AKSLFNS I++T P D F+N F
Sbjct: 51 PREPSLRNPFKSPNLSDAKSLFNS-IAATSRIPLDLKFHNSVLQSYASIAVVDDTVKFFQ 109
Query: 442 HMVKKHPAFCPNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRS 621
H++K P F P R T+ LL +C +PD S+SNVHR+LNLM NNG P+QV+TD+AVRS
Sbjct: 110 HIMKSQPNFRPGRSTFLILLSHACRAPDS-SISNVHRVLNLMVNNGLEPDQVTTDIAVRS 168
Query: 622 LCGCGREEHAIELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMR-EFGIKP 798
LC GR + A +L+KEL+ K+S PDTYTYNFL++HL K + L V F+ +MR +F +KP
Sbjct: 169 LCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKP 228
Query: 799 DLVTYTIMIDNVCNSKNLREATRLLGVLSEEG 894
DLV++TI+IDNVCNSKNLREA L+ L G
Sbjct: 229 DLVSFTILIDNVCNSKNLREAMYLVSKLGNAG 260
Score = 67.0 bits (162), Expect = 9e-09
Identities = 55/235 (23%), Positives = 98/235 (41%)
Frame = +1
Query: 190 SPISNFPTQKKSSKKNPIKSDDSTTKSNVPSITFESPNLSEAKSLFNSLISSTKNTPSDS 369
S ISN N ++ D TT V S+ E+ + EAK L L + K++P D+
Sbjct: 138 SSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLC-ETGRVDEAKDLMKEL--TEKHSPPDT 194
Query: 370 SFYNXXXXXXXXXXXXXXXXXXFNHMVKKHPAFCPNRFTYHTLLVQSCSSPDEESLSNVH 549
YN + M P+ ++ L+ C+S ++L
Sbjct: 195 YTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVK-PDLVSFTILIDNVCNS---KNLREAM 250
Query: 550 RILNLMTNNGFPPNQVSTDVAVRSLCGCGREEHAIELIKELSAKNSQPDTYTYNFLVRHL 729
+++ + N GF P+ + ++ C + A+ + K++ + +PD TYN L+ L
Sbjct: 251 YLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGL 310
Query: 730 VKNRSLSTVNCFIKDMREFGIKPDLVTYTIMIDNVCNSKNLREATRLLGVLSEEG 894
K + ++K M + G +PD TYT +++ +C A LL + G
Sbjct: 311 SKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARG 365
>gb|EXC35267.1| hypothetical protein L484_026589 [Morus notabilis]
Length = 444
Score = 209 bits (531), Expect = 1e-51
Identities = 120/239 (50%), Positives = 150/239 (62%), Gaps = 1/239 (0%)
Frame = +1
Query: 181 QIPSPISNFPTQKKSSKKNPIKSDDSTTKSNVPSITFESPNLSEAKSLFNSLISSTKNTP 360
+ P P S P K S P + T F+SP+LS AKSLFNS ISST N
Sbjct: 8 KFPKPAS-IPQPKTPSSLIPSQKPSKTPLIPSSKFNFKSPDLSAAKSLFNS-ISSTVNP- 64
Query: 361 SDSSFYNXXXXXXXXXXXXXXXXXXFNHMVKKHPAFCPNRFTYHTLLVQSCSSPDEESLS 540
D + N HM+K HPAF P+R TYH LL SC++PD SLS
Sbjct: 65 -DLNHTNSFLKSYASISTVDDSISLLRHMIKTHPAFSPDRSTYHILLTHSCAAPDP-SLS 122
Query: 541 NVHRILNLMTNNGFPPNQVSTDVAVRSLCGCGREEHAIELIKELSAKNSQPDTYTYNFLV 720
VH +LNLM++ GF P++V+ D+AVR+LC G+ +HA++L E+S ++S PD+YTYNFLV
Sbjct: 123 PVHGVLNLMSSAGFSPDKVTADIAVRALCYAGKIDHAVQLFDEMSLRHSVPDSYTYNFLV 182
Query: 721 RHLVKNRSLSTVNCFI-KDMREFGIKPDLVTYTIMIDNVCNSKNLREATRLLGVLSEEG 894
+ L K R LST+ FI K FG+KPDLVTYTI+IDNVCNSKNLRE TRL+ VL EEG
Sbjct: 183 KCLCKCRPLSTIYEFIDKTRSSFGLKPDLVTYTIIIDNVCNSKNLREITRLVAVLGEEG 241
Score = 73.9 bits (180), Expect = 7e-11
Identities = 40/141 (28%), Positives = 72/141 (51%)
Frame = +1
Query: 472 PNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLCGCGREEHA 651
P+ TY ++ C+S ++L + R++ ++ GF P+ + ++ C R A
Sbjct: 209 PDLVTYTIIIDNVCNS---KNLREITRLVAVLGEEGFKPDCFLYNTIMKGYCMLSRGSEA 265
Query: 652 IELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMREFGIKPDLVTYTIMIDN 831
IE+ ++ +PDT TYN L+ L K+ ++K M E G PD+VTYT +++
Sbjct: 266 IEVYNKMKENGVEPDTVTYNTLIFGLAKSGRAKEARKYLKIMAEKGHSPDVVTYTSLMNG 325
Query: 832 VCNSKNLREATRLLGVLSEEG 894
+C +++ A LL + E G
Sbjct: 326 LCRERDVLGAYALLEEMKERG 346
Score = 68.6 bits (166), Expect = 3e-09
Identities = 39/144 (27%), Positives = 69/144 (47%), Gaps = 1/144 (0%)
Frame = +1
Query: 466 FCPNRFTYHTLLVQSCS-SPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLCGCGRE 642
F P+ F Y+T++ C S E++ + N M NG P+ V+ + + L GR
Sbjct: 242 FKPDCFLYNTIMKGYCMLSRGSEAIE----VYNKMKENGVEPDTVTYNTLIFGLAKSGRA 297
Query: 643 EHAIELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMREFGIKPDLVTYTIM 822
+ A + +K ++ K PD TY L+ L + R + +++M+E G +P+ TY +
Sbjct: 298 KEARKYLKIMAEKGHSPDVVTYTSLMNGLCRERDVLGAYALLEEMKERGCEPNECTYNTL 357
Query: 823 IDNVCNSKNLREATRLLGVLSEEG 894
+ C +K + L V+ E G
Sbjct: 358 LHGFCKAKMVERGVELYRVMKERG 381