BLASTX nr result
ID: Rehmannia22_contig00032319
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00032319
(303 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_004347415.1| replicase [Sweet potato caulimo-like virus] ... 123 3e-26
gb|ADZ45041.1| reverse transcriptase [Sweet potato caulimo-like ... 121 1e-25
gb|ADZ45039.1| reverse transcriptase [Sweet potato caulimo-like ... 121 1e-25
gb|ADZ45045.1| reverse transcriptase [Sweet potato caulimo-like ... 120 2e-25
gb|ADZ45044.1| reverse transcriptase [Sweet potato caulimo-like ... 120 2e-25
gb|ADZ45043.1| reverse transcriptase [Sweet potato caulimo-like ... 120 2e-25
gb|ADZ45038.1| reverse transcriptase [Sweet potato caulimo-like ... 120 2e-25
gb|ADZ45040.1| reverse transcriptase [Sweet potato caulimo-like ... 120 2e-25
gb|ADZ45046.1| reverse transcriptase [Sweet potato caulimo-like ... 117 2e-24
gb|ABA96037.1| retrotransposon protein, putative, Ty3-gypsy subc... 114 1e-23
gb|ABA99914.1| retrotransposon protein, putative, Ty3-gypsy subc... 114 1e-23
emb|CAE02744.2| OSJNBa0006B20.7 [Oryza sativa Japonica Group] gi... 114 1e-23
gb|AAP53741.2| transposon protein, putative, CACTA, En/Spm sub-c... 114 1e-23
gb|ABG66247.1| retrotransposon protein, putative, Ty3-gypsy subc... 114 1e-23
tpd|FAA00012.1| TPA: hypothetical protein [Rice tungro bacillifo... 114 1e-23
tpd|FAA00009.1| TPA: hypothetical protein [Rice tungro bacillifo... 114 1e-23
gb|ABA99372.1| retrotransposon protein, putative, Ty3-gypsy subc... 113 2e-23
tpd|FAA00006.1| TPA: hypothetical protein [Rice tungro bacillifo... 113 3e-23
emb|CAE03089.2| OSJNBa0017B10.4 [Oryza sativa Japonica Group] 112 4e-23
gb|AAU10730.1| putative polyprotein [Oryza sativa Japonica Group] 112 7e-23
>ref|YP_004347415.1| replicase [Sweet potato caulimo-like virus]
gi|327415369|gb|ADR03142.2| replicase [Sweet potato
caulimo-like virus]
Length = 641
Score = 123 bits (308), Expect = 3e-26
Identities = 55/100 (55%), Positives = 77/100 (77%)
Frame = +2
Query: 2 KKFTAFSTPQGHYIWNVMPMGLANAPQIYQRKMDNLFKDYFSFMFVYIDDILIASKNMKE 181
KK+TAF+ PQG+Y+W V+P G N+P IYQ+ MD +F+ Y+ F+ VYIDDILI SK +E
Sbjct: 312 KKYTAFTVPQGYYVWIVLPFGYHNSPSIYQQFMDGIFRPYYDFILVYIDDILIFSKTYEE 371
Query: 182 HLKHLEIFSDVCHKEGLVLSEKKAVIATRQIEFLGIEIDE 301
H HLEIF ++ K G+VLS+KKA I ++IEFLG++I++
Sbjct: 372 HKIHLEIFRNIIIKHGIVLSKKKAEIGKQKIEFLGVKIEQ 411
>gb|ADZ45041.1| reverse transcriptase [Sweet potato caulimo-like virus]
Length = 291
Score = 121 bits (303), Expect = 1e-25
Identities = 55/100 (55%), Positives = 76/100 (76%)
Frame = +2
Query: 2 KKFTAFSTPQGHYIWNVMPMGLANAPQIYQRKMDNLFKDYFSFMFVYIDDILIASKNMKE 181
KK+TAF+ PQG+Y+W V+P G N+P IYQ+ MD +F+ Y+ F+ VYIDDILI SK +E
Sbjct: 162 KKYTAFTVPQGYYVWIVLPFGYHNSPSIYQQFMDGIFRPYYDFILVYIDDILIFSKTYEE 221
Query: 182 HLKHLEIFSDVCHKEGLVLSEKKAVIATRQIEFLGIEIDE 301
H HLEIF ++ K G+VLS+KKA I ++IEFLG+ I++
Sbjct: 222 HKIHLEIFRNLVIKYGIVLSKKKAEIGKQRIEFLGVRIEQ 261
>gb|ADZ45039.1| reverse transcriptase [Sweet potato caulimo-like virus]
Length = 291
Score = 121 bits (303), Expect = 1e-25
Identities = 55/100 (55%), Positives = 76/100 (76%)
Frame = +2
Query: 2 KKFTAFSTPQGHYIWNVMPMGLANAPQIYQRKMDNLFKDYFSFMFVYIDDILIASKNMKE 181
KK+TAF+ PQG+Y+W V+P G N+P IYQ+ MD +F+ Y+ F+ VYIDDILI SK +E
Sbjct: 162 KKYTAFTVPQGYYVWIVLPFGYHNSPSIYQQFMDGIFRPYYDFILVYIDDILIFSKTYEE 221
Query: 182 HLKHLEIFSDVCHKEGLVLSEKKAVIATRQIEFLGIEIDE 301
H HLEIF ++ K G+VLS+KKA I ++IEFLG+ I++
Sbjct: 222 HKIHLEIFRNLVIKYGIVLSKKKAEIGKQRIEFLGVRIEQ 261
>gb|ADZ45045.1| reverse transcriptase [Sweet potato caulimo-like virus]
Length = 291
Score = 120 bits (301), Expect = 2e-25
Identities = 54/100 (54%), Positives = 75/100 (75%)
Frame = +2
Query: 2 KKFTAFSTPQGHYIWNVMPMGLANAPQIYQRKMDNLFKDYFSFMFVYIDDILIASKNMKE 181
KK+TAF+ PQG+Y+W V+P G N+P IYQ+ MD +F+ Y+ F+ VYIDDILI SK +E
Sbjct: 162 KKYTAFTVPQGYYVWIVLPFGYHNSPSIYQQFMDGIFRPYYDFILVYIDDILIFSKTYEE 221
Query: 182 HLKHLEIFSDVCHKEGLVLSEKKAVIATRQIEFLGIEIDE 301
H HL IF + K G+VLS+KKA I ++IEFLG++I++
Sbjct: 222 HKIHLAIFRSIIIKHGIVLSKKKAEIGKQKIEFLGVKIEQ 261
>gb|ADZ45044.1| reverse transcriptase [Sweet potato caulimo-like virus]
Length = 291
Score = 120 bits (301), Expect = 2e-25
Identities = 54/100 (54%), Positives = 75/100 (75%)
Frame = +2
Query: 2 KKFTAFSTPQGHYIWNVMPMGLANAPQIYQRKMDNLFKDYFSFMFVYIDDILIASKNMKE 181
KK+TAF+ PQG+Y+W V+P G N+P IYQ+ MD +F+ Y+ F+ VYIDDILI SK +E
Sbjct: 162 KKYTAFTVPQGYYVWIVLPFGYHNSPSIYQQFMDGIFRPYYDFILVYIDDILIFSKTYEE 221
Query: 182 HLKHLEIFSDVCHKEGLVLSEKKAVIATRQIEFLGIEIDE 301
H HL IF + K G+VLS+KKA I ++IEFLG++I++
Sbjct: 222 HKIHLAIFRSIIIKHGIVLSKKKAEIGRQKIEFLGVKIEQ 261
>gb|ADZ45043.1| reverse transcriptase [Sweet potato caulimo-like virus]
Length = 291
Score = 120 bits (301), Expect = 2e-25
Identities = 54/100 (54%), Positives = 75/100 (75%)
Frame = +2
Query: 2 KKFTAFSTPQGHYIWNVMPMGLANAPQIYQRKMDNLFKDYFSFMFVYIDDILIASKNMKE 181
KK+TAF+ PQG+Y+W V+P G N+P IYQ+ MD +F+ Y+ F+ VYIDDILI SK +E
Sbjct: 162 KKYTAFTVPQGYYVWIVLPFGYHNSPSIYQQFMDGIFRPYYDFILVYIDDILIFSKTYEE 221
Query: 182 HLKHLEIFSDVCHKEGLVLSEKKAVIATRQIEFLGIEIDE 301
H HL IF + K G+VLS+KKA I ++IEFLG++I++
Sbjct: 222 HKIHLAIFRSIIIKHGIVLSKKKAEIGKQKIEFLGVKIEQ 261
>gb|ADZ45038.1| reverse transcriptase [Sweet potato caulimo-like virus]
gi|325698343|gb|ADZ45042.1| reverse transcriptase [Sweet
potato caulimo-like virus]
Length = 291
Score = 120 bits (301), Expect = 2e-25
Identities = 54/100 (54%), Positives = 76/100 (76%)
Frame = +2
Query: 2 KKFTAFSTPQGHYIWNVMPMGLANAPQIYQRKMDNLFKDYFSFMFVYIDDILIASKNMKE 181
KK+TAF+ PQG+Y+W V+P G N+P IYQ+ MD +F+ Y+ F+ VYIDDILI SK +E
Sbjct: 162 KKYTAFTVPQGYYVWIVLPFGYHNSPSIYQQFMDGIFRPYYEFILVYIDDILIFSKTYEE 221
Query: 182 HLKHLEIFSDVCHKEGLVLSEKKAVIATRQIEFLGIEIDE 301
H HL IF ++ K G+VLS+KKA I ++IEFLG++I++
Sbjct: 222 HKIHLMIFRNIILKHGIVLSKKKAEIGKQKIEFLGVKIEQ 261
>gb|ADZ45040.1| reverse transcriptase [Sweet potato caulimo-like virus]
Length = 291
Score = 120 bits (300), Expect = 2e-25
Identities = 54/100 (54%), Positives = 76/100 (76%)
Frame = +2
Query: 2 KKFTAFSTPQGHYIWNVMPMGLANAPQIYQRKMDNLFKDYFSFMFVYIDDILIASKNMKE 181
KK+TAF+ PQG+Y+W V+P G N+P IYQ+ MD +F+ Y+ F+ VYIDDILI S+ +E
Sbjct: 162 KKYTAFTVPQGYYVWIVLPFGYHNSPSIYQQFMDGIFRPYYDFILVYIDDILIFSRTYEE 221
Query: 182 HLKHLEIFSDVCHKEGLVLSEKKAVIATRQIEFLGIEIDE 301
H HLEIF ++ K G+VLS+KKA I ++IEFLG+ I++
Sbjct: 222 HKIHLEIFRNLVIKYGIVLSKKKAEIGKQRIEFLGVRIEQ 261
>gb|ADZ45046.1| reverse transcriptase [Sweet potato caulimo-like virus]
Length = 276
Score = 117 bits (293), Expect = 2e-24
Identities = 53/100 (53%), Positives = 74/100 (74%)
Frame = +2
Query: 2 KKFTAFSTPQGHYIWNVMPMGLANAPQIYQRKMDNLFKDYFSFMFVYIDDILIASKNMKE 181
KK+TAF+ PQG+Y+W V+P G N+ IYQ+ MD +F+ Y+ F+ VYIDDILI SK +E
Sbjct: 159 KKYTAFTVPQGYYVWIVLPFGYHNSSSIYQQFMDGIFRPYYDFILVYIDDILIFSKTYEE 218
Query: 182 HLKHLEIFSDVCHKEGLVLSEKKAVIATRQIEFLGIEIDE 301
H HL IF + K G+VLS+KKA I ++IEFLG++I++
Sbjct: 219 HKIHLAIFRSIIIKHGIVLSKKKAEIGRQKIEFLGVKIEQ 258
>gb|ABA96037.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 792
Score = 114 bits (285), Expect = 1e-23
Identities = 53/99 (53%), Positives = 70/99 (70%)
Frame = +2
Query: 5 KFTAFSTPQGHYIWNVMPMGLANAPQIYQRKMDNLFKDYFSFMFVYIDDILIASKNMKEH 184
++TAF+ PQGHY W VMP+GL NAP ++QRKM N+F D F+ VYIDD+LI SK K+H
Sbjct: 290 EWTAFTCPQGHYEWLVMPLGLKNAPALFQRKMQNIFNDNQEFVLVYIDDLLIFSKTYKDH 349
Query: 185 LKHLEIFSDVCHKEGLVLSEKKAVIATRQIEFLGIEIDE 301
+ HLE+F + GL+LS+KK I ++ FLG EI E
Sbjct: 350 IAHLELFFRKVEQNGLILSKKKMEICKEKVNFLGHEIGE 388
>gb|ABA99914.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 730
Score = 114 bits (285), Expect = 1e-23
Identities = 54/99 (54%), Positives = 70/99 (70%)
Frame = +2
Query: 5 KFTAFSTPQGHYIWNVMPMGLANAPQIYQRKMDNLFKDYFSFMFVYIDDILIASKNMKEH 184
++TAF+ PQGHY W VMP+GL NAP I+QRKM N+F + F+ VYIDD+L+ S+ KEH
Sbjct: 228 EWTAFTCPQGHYEWLVMPLGLKNAPAIFQRKMQNIFNENQEFILVYIDDLLVFSRTYKEH 287
Query: 185 LKHLEIFSDVCHKEGLVLSEKKAVIATRQIEFLGIEIDE 301
+ HLEIF + GL+LS+KK I +I FLG EI E
Sbjct: 288 IAHLEIFFRKVEQNGLILSKKKMEICKEKINFLGHEIGE 326
>emb|CAE02744.2| OSJNBa0006B20.7 [Oryza sativa Japonica Group]
gi|116310779|emb|CAH67571.1| H0315A08.1 [Oryza sativa
Indica Group]
Length = 685
Score = 114 bits (285), Expect = 1e-23
Identities = 54/99 (54%), Positives = 70/99 (70%)
Frame = +2
Query: 5 KFTAFSTPQGHYIWNVMPMGLANAPQIYQRKMDNLFKDYFSFMFVYIDDILIASKNMKEH 184
++TAF+ PQGHY W VMP+GL NAP I+QRKM N+F + F+ VYIDD+L+ S+ KEH
Sbjct: 290 EWTAFTCPQGHYEWLVMPLGLKNAPAIFQRKMQNIFNENQEFILVYIDDLLVFSRTYKEH 349
Query: 185 LKHLEIFSDVCHKEGLVLSEKKAVIATRQIEFLGIEIDE 301
+ HLEIF + GL+LS+KK I +I FLG EI E
Sbjct: 350 IAHLEIFIRKVEQNGLILSKKKMEICKEKINFLGHEIGE 388
>gb|AAP53741.2| transposon protein, putative, CACTA, En/Spm sub-class [Oryza sativa
Japonica Group]
Length = 2828
Score = 114 bits (285), Expect = 1e-23
Identities = 53/99 (53%), Positives = 70/99 (70%)
Frame = +2
Query: 5 KFTAFSTPQGHYIWNVMPMGLANAPQIYQRKMDNLFKDYFSFMFVYIDDILIASKNMKEH 184
++TAF+ PQGHY W VMP+GL NAP ++QRKM N+F D F+ VYIDD+LI SK K+H
Sbjct: 2354 EWTAFTCPQGHYEWLVMPLGLKNAPALFQRKMQNIFNDNQEFVLVYIDDLLIFSKTYKDH 2413
Query: 185 LKHLEIFSDVCHKEGLVLSEKKAVIATRQIEFLGIEIDE 301
+ HLE+F + GL+LS+KK I ++ FLG EI E
Sbjct: 2414 IAHLELFFRKVEQNGLILSKKKMEICKEKVNFLGHEIGE 2452
>gb|ABG66247.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 764
Score = 114 bits (285), Expect = 1e-23
Identities = 53/99 (53%), Positives = 70/99 (70%)
Frame = +2
Query: 5 KFTAFSTPQGHYIWNVMPMGLANAPQIYQRKMDNLFKDYFSFMFVYIDDILIASKNMKEH 184
++TAF+ PQGHY W VMP+GL NAP ++QRKM N+F D F+ VYIDD+LI SK K+H
Sbjct: 290 EWTAFTCPQGHYEWLVMPLGLKNAPALFQRKMQNIFNDNQEFVLVYIDDLLIFSKTYKDH 349
Query: 185 LKHLEIFSDVCHKEGLVLSEKKAVIATRQIEFLGIEIDE 301
+ HLE+F + GL+LS+KK I ++ FLG EI E
Sbjct: 350 IAHLELFFRKVEQNGLILSKKKMEICKEKVNFLGHEIGE 388
>tpd|FAA00012.1| TPA: hypothetical protein [Rice tungro bacilliform virus]
Length = 1718
Score = 114 bits (285), Expect = 1e-23
Identities = 54/99 (54%), Positives = 70/99 (70%)
Frame = +2
Query: 5 KFTAFSTPQGHYIWNVMPMGLANAPQIYQRKMDNLFKDYFSFMFVYIDDILIASKNMKEH 184
++TAF+ PQGHY W VMP+GL NAP I+QRKM N+F + F+ VYIDD+L+ S+ KEH
Sbjct: 1395 EWTAFTCPQGHYEWLVMPLGLKNAPAIFQRKMQNIFNENQEFILVYIDDLLVFSRTYKEH 1454
Query: 185 LKHLEIFSDVCHKEGLVLSEKKAVIATRQIEFLGIEIDE 301
+ HLEIF + GL+LS+KK I +I FLG EI E
Sbjct: 1455 IAHLEIFFRKVEQNGLILSKKKMEICKEKINFLGHEIGE 1493
>tpd|FAA00009.1| TPA: hypothetical protein [Rice tungro bacilliform virus]
Length = 1718
Score = 114 bits (285), Expect = 1e-23
Identities = 54/99 (54%), Positives = 70/99 (70%)
Frame = +2
Query: 5 KFTAFSTPQGHYIWNVMPMGLANAPQIYQRKMDNLFKDYFSFMFVYIDDILIASKNMKEH 184
++TAF+ PQGHY W VMP+GL NAP I+QRKM N+F + F+ VYIDD+L+ S+ KEH
Sbjct: 1395 EWTAFTCPQGHYEWLVMPLGLKNAPAIFQRKMQNIFNENQEFILVYIDDLLVFSRTYKEH 1454
Query: 185 LKHLEIFSDVCHKEGLVLSEKKAVIATRQIEFLGIEIDE 301
+ HLEIF + GL+LS+KK I +I FLG EI E
Sbjct: 1455 IAHLEIFFRKVEQNGLILSKKKMEICKEKINFLGHEIGE 1493
>gb|ABA99372.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1098
Score = 113 bits (283), Expect = 2e-23
Identities = 53/99 (53%), Positives = 70/99 (70%)
Frame = +2
Query: 5 KFTAFSTPQGHYIWNVMPMGLANAPQIYQRKMDNLFKDYFSFMFVYIDDILIASKNMKEH 184
++TAF+ PQGHY W VMP+GL NAP ++QRKM N+F D F+ VYIDD+LI SK K+H
Sbjct: 624 EWTAFTCPQGHYEWLVMPLGLKNAPALFQRKMQNIFNDNQEFVLVYIDDLLIFSKTYKDH 683
Query: 185 LKHLEIFSDVCHKEGLVLSEKKAVIATRQIEFLGIEIDE 301
+ HLE+F + GL+LS+KK I ++ FLG EI E
Sbjct: 684 IAHLELFFRKVEQNGLILSKKKMEIYKEKVNFLGHEIGE 722
>tpd|FAA00006.1| TPA: hypothetical protein [Rice tungro bacilliform virus]
Length = 1711
Score = 113 bits (282), Expect = 3e-23
Identities = 53/99 (53%), Positives = 69/99 (69%)
Frame = +2
Query: 5 KFTAFSTPQGHYIWNVMPMGLANAPQIYQRKMDNLFKDYFSFMFVYIDDILIASKNMKEH 184
++TAF+ PQGHY W VMP+GL NAP ++QRKM N+F D F+ VYIDD+LI SK K H
Sbjct: 1388 EWTAFTCPQGHYEWLVMPLGLKNAPALFQRKMQNIFNDNQEFVLVYIDDLLIFSKTYKXH 1447
Query: 185 LKHLEIFSDVCHKEGLVLSEKKAVIATRQIEFLGIEIDE 301
+ HLE+F + GL+LS+KK I ++ FLG EI E
Sbjct: 1448 IAHLELFFRKVEQNGLILSKKKMEICKEKVNFLGHEIGE 1486
>emb|CAE03089.2| OSJNBa0017B10.4 [Oryza sativa Japonica Group]
Length = 429
Score = 112 bits (281), Expect = 4e-23
Identities = 53/99 (53%), Positives = 70/99 (70%)
Frame = +2
Query: 5 KFTAFSTPQGHYIWNVMPMGLANAPQIYQRKMDNLFKDYFSFMFVYIDDILIASKNMKEH 184
++TAF+ PQGHY W VMP+GL NAP I+QRK+ N+F + F+ VYIDD+L+ S+ KEH
Sbjct: 179 EWTAFTCPQGHYEWLVMPLGLKNAPAIFQRKIQNIFNENQEFILVYIDDLLVFSRTYKEH 238
Query: 185 LKHLEIFSDVCHKEGLVLSEKKAVIATRQIEFLGIEIDE 301
+ HLEIF + GL+LS+KK I +I FLG EI E
Sbjct: 239 IAHLEIFFRKVEQNGLILSKKKMEICKEKINFLGHEIGE 277
>gb|AAU10730.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1326
Score = 112 bits (279), Expect = 7e-23
Identities = 53/99 (53%), Positives = 70/99 (70%)
Frame = +2
Query: 5 KFTAFSTPQGHYIWNVMPMGLANAPQIYQRKMDNLFKDYFSFMFVYIDDILIASKNMKEH 184
++TAF+ PQGHY W VMP+GL NAP I+QRKM N+F + F+ VYI+D+L+ S+ KEH
Sbjct: 970 EWTAFTCPQGHYEWLVMPLGLKNAPAIFQRKMQNIFNENQEFILVYINDLLVFSRTYKEH 1029
Query: 185 LKHLEIFSDVCHKEGLVLSEKKAVIATRQIEFLGIEIDE 301
+ HLEIF + GL+LS+KK I +I FLG EI E
Sbjct: 1030 IAHLEIFFRKVEQNGLILSKKKMEICKEKINFLGHEIRE 1068