BLASTX nr result
ID: Rehmannia22_contig00032259
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00032259
(1338 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB10876.1| polyprotein [Arabidopsis thaliana] 162 9e-60
gb|AAC02666.1| polyprotein [Arabidopsis thaliana] 159 1e-58
gb|AAC02664.1| polyprotein [Arabidopsis thaliana] 159 1e-58
gb|AAC02669.1| polyprotein [Arabidopsis thaliana] 159 1e-58
gb|AAK43485.1|AC084807_10 polyprotein, putative [Arabidopsis tha... 144 5e-56
emb|CAN70473.1| hypothetical protein VITISV_037490 [Vitis vinifera] 155 4e-55
gb|AAC02672.1| polyprotein [Arabidopsis arenosa] 152 5e-55
dbj|BAM42650.1| Polyprotein [Arabidopsis thaliana] 145 1e-53
dbj|BAA78426.1| polyprotein [Arabidopsis thaliana] 144 2e-53
dbj|BAM42649.1| Polyprotein [Arabidopsis thaliana] 144 2e-53
dbj|BAM42647.1| polyprotein [Arabidopsis thaliana] gi|403406144|... 144 2e-53
dbj|BAM42646.1| polyprotein [Arabidopsis thaliana] 144 2e-53
emb|CAB46043.1| retrotransposon like protein [Arabidopsis thalia... 144 2e-53
gb|AAC79110.1| putative polyprotein of LTR transposon [Arabidops... 144 2e-53
dbj|BAM44532.1| polyprotein [Arabidopsis thaliana] 144 2e-53
dbj|BAM44530.1| polyprotein [Arabidopsis thaliana] 144 2e-53
dbj|BAA78424.1| polyprotein [Arabidopsis thaliana] gi|404433798|... 144 2e-53
dbj|BAA78427.1| polyprotein [Arabidopsis thaliana] 144 3e-53
dbj|BAM44531.1| polyprotein [Arabidopsis thaliana] 144 3e-53
gb|AAD14478.1| Strong similarity to gb|AF039376 Evelknievel retr... 149 4e-53
>dbj|BAB10876.1| polyprotein [Arabidopsis thaliana]
Length = 1429
Score = 162 bits (410), Expect(2) = 9e-60
Identities = 75/116 (64%), Positives = 88/116 (75%)
Frame = +1
Query: 223 TTCSILHHASLPLTFWSYALQTAAYLINRMPTSVLRNMSPFDILFRHPPNYSKLHVFGCL 402
T ++L HASLP TFW+YA TA YLINRMPT VL+ SP+ LF+ PNY KL VFGCL
Sbjct: 618 TGLALLTHASLPKTFWTYAFATAVYLINRMPTEVLQGTSPYVKLFQMSPNYLKLRVFGCL 677
Query: 403 CFPWLAPYTTNKLQSKSIPCVFLDYITTQSAYLCFDPSSGKTYTSRHVQFVEDSFP 570
C+PWL PY TNKL+++S CVFL Y TQSAYLC D ++ + YTSRHVQFVE SFP
Sbjct: 678 CYPWLRPYNTNKLEARSTMCVFLGYSLTQSAYLCLDIATNRIYTSRHVQFVESSFP 733
Score = 96.7 bits (239), Expect(2) = 9e-60
Identities = 44/61 (72%), Positives = 54/61 (88%), Gaps = 1/61 (1%)
Frame = +2
Query: 44 FKSIVENQFDYKIKTLYSDNGGEFIKLRPFLKKHGISHLTTPPYTPEY-GLSERKHHHLV 220
FK++VEN+F +I+TLYSDNGGEFI LRPFL HGISHLT+PP+TPE+ GL+ERKH H+V
Sbjct: 557 FKALVENRFQSRIRTLYSDNGGEFIGLRPFLAAHGISHLTSPPHTPEHNGLAERKHRHIV 616
Query: 221 E 223
E
Sbjct: 617 E 617
Score = 94.4 bits (233), Expect(2) = 4e-28
Identities = 47/107 (43%), Positives = 63/107 (58%), Gaps = 1/107 (0%)
Frame = +2
Query: 887 PAPRATHPMTTRSINGIFKPK-QLHLATKFPTPAPIEPSCYTQALKIPEWKTTMS*EFTA 1063
P P+ HPM TR+ N I KPK + +L T + P P+ QALK P W+ MS E A
Sbjct: 884 PPPQNDHPMRTRAKNQITKPKTKFNLTTSLTSSKPTIPTTVAQALKDPNWRNAMSEEINA 943
Query: 1064 LMANGTWTLVPKQDHFNIIGNKWVYRIKHNTDGTITWYKTHLVRRGF 1204
M N TW LV ++ ++I KW++ +K+N DG+I YK LV RGF
Sbjct: 944 QMKNHTWDLVSPEEAKHVISCKWIFTLKYNVDGSIARYKARLVARGF 990
Score = 58.9 bits (141), Expect(2) = 4e-28
Identities = 28/49 (57%), Positives = 37/49 (75%)
Frame = +1
Query: 1192 AKGFLQRPDIDYNDTFSHVIKPQTIKLVLCVALSRNWPLIQMDVNNVFL 1338
A+GF Q+ IDY++TFS VIK TI+ VL VA+ RNW + Q+D+NN FL
Sbjct: 987 ARGFNQQYGIDYSETFSPVIKSTTIRTVLEVAVKRNWSIHQVDINNAFL 1035
>gb|AAC02666.1| polyprotein [Arabidopsis thaliana]
Length = 1451
Score = 159 bits (401), Expect(3) = 1e-58
Identities = 82/146 (56%), Positives = 99/146 (67%), Gaps = 6/146 (4%)
Frame = +1
Query: 223 TTCSILHHASLPLTFWSYALQTAAYLINRMPTSVLRNMSPFDILFRHPPNYSKLHVFGCL 402
T ++L AS+P +WSYA TA YLINRM T VL N SP+ LF PPNY KL +FGCL
Sbjct: 637 TGLTLLSTASMPKEYWSYAFATAVYLINRMLTPVLGNESPYVKLFGQPPNYLKLRIFGCL 696
Query: 403 CFPWLAPYTTNKLQSKSIPCVFLDYITTQSAYLCFDPSSGKTYTSRHVQFVEDSFP---- 570
CFPWL PYT +KL ++S+PCV L Y +QSAYLC D ++G+ YTSRHVQF E SFP
Sbjct: 697 CFPWLRPYTAHKLDNRSVPCVLLGYSLSQSAYLCLDRATGRVYTSRHVQFAESSFPFSTT 756
Query: 571 SPVI--PLPRPLILSTLIVTIFPLLA 642
SP + P PL T V++ PLLA
Sbjct: 757 SPSVTPPSDPPLSQDTRPVSV-PLLA 781
Score = 92.4 bits (228), Expect(3) = 1e-58
Identities = 42/61 (68%), Positives = 51/61 (83%), Gaps = 1/61 (1%)
Frame = +2
Query: 44 FKSIVENQFDYKIKTLYSDNGGEFIKLRPFLKKHGISHLTTPPYTPEY-GLSERKHHHLV 220
F ++VEN+F +KI TLYSDNGGEFI +R FL HGISH+TTPP+TPE G+SERKH H+V
Sbjct: 576 FTALVENKFKFKIGTLYSDNGGEFIAMRSFLASHGISHMTTPPHTPELNGISERKHRHIV 635
Query: 221 E 223
E
Sbjct: 636 E 636
Score = 25.0 bits (53), Expect(3) = 1e-58
Identities = 29/106 (27%), Positives = 43/106 (40%), Gaps = 23/106 (21%)
Frame = +3
Query: 630 PTSSLPH-----------------PLSITHHSP-SPPCL*QDQATTSNSD-----NLTPS 740
P+ S PH LS++ SP + P L ++ NS+ + P
Sbjct: 792 PSCSAPHRSPSQSENLSPPAPLQPSLSLSPTSPITSPSLSEESLVGHNSETGPTGSSPPL 851
Query: 741 MYLPESPQHSASR*LSTSPHPNL*PPTAHSPPPSILPDEYLNTLSS 878
P+ PQ + + STSPH + P +SP P P TL+S
Sbjct: 852 SPQPQRPQPQSPQ--STSPHSS--SPQPNSPNPQHSPRSLTPTLTS 893
Score = 84.0 bits (206), Expect(2) = 2e-23
Identities = 55/153 (35%), Positives = 77/153 (50%), Gaps = 10/153 (6%)
Frame = +2
Query: 776 PLTLHITTPESLTSYCTFSSTLHTTRRVPEHLIFAKEPAPRAT-------HPMTTRSING 934
P + T+P S + + H+ R + L + P+P H M TRS N
Sbjct: 860 PQSPQSTSPHSSSPQPNSPNPQHSPRSLTPTLTSSPSPSPPPNPNPPPIQHTMRTRSKNN 919
Query: 935 IFKP--KQLHLATKFPTPA-PIEPSCYTQALKIPEWKTTMS*EFTALMANGTWTLVPKQD 1105
I KP K +LATK PTP PI P +AL P W+ M E A NGT+ LVP
Sbjct: 920 IVKPNPKFANLATK-PTPLKPIIPKTVVEALLDPNWRQAMCDEINAQTRNGTFDLVPPAP 978
Query: 1106 HFNIIGNKWVYRIKHNTDGTITWYKTHLVRRGF 1204
+ N++G KWV+ +K+ ++G + YK LV +GF
Sbjct: 979 NQNVVGCKWVFTLKYLSNGVLDRYKARLVAKGF 1011
Score = 53.1 bits (126), Expect(2) = 2e-23
Identities = 25/49 (51%), Positives = 35/49 (71%)
Frame = +1
Query: 1192 AKGFLQRPDIDYNDTFSHVIKPQTIKLVLCVALSRNWPLIQMDVNNVFL 1338
AKGF Q+ D+ +TFS VIK T++ VL +A+S+ W + Q+DVNN FL
Sbjct: 1008 AKGFHQQYGHDFKETFSPVIKSTTVRSVLHIAVSKGWSIRQIDVNNAFL 1056
>gb|AAC02664.1| polyprotein [Arabidopsis thaliana]
Length = 1451
Score = 159 bits (401), Expect(3) = 1e-58
Identities = 82/146 (56%), Positives = 99/146 (67%), Gaps = 6/146 (4%)
Frame = +1
Query: 223 TTCSILHHASLPLTFWSYALQTAAYLINRMPTSVLRNMSPFDILFRHPPNYSKLHVFGCL 402
T ++L AS+P +WSYA TA YLINRM T VL N SP+ LF PPNY KL +FGCL
Sbjct: 637 TGLTLLSTASMPKEYWSYAFATAVYLINRMLTPVLGNESPYVKLFGQPPNYLKLRIFGCL 696
Query: 403 CFPWLAPYTTNKLQSKSIPCVFLDYITTQSAYLCFDPSSGKTYTSRHVQFVEDSFP---- 570
CFPWL PYT +KL ++S+PCV L Y +QSAYLC D ++G+ YTSRHVQF E SFP
Sbjct: 697 CFPWLRPYTAHKLDNRSVPCVLLGYSLSQSAYLCLDRATGRVYTSRHVQFAESSFPFSTT 756
Query: 571 SPVI--PLPRPLILSTLIVTIFPLLA 642
SP + P PL T V++ PLLA
Sbjct: 757 SPSVTPPSDPPLSQDTRPVSV-PLLA 781
Score = 92.4 bits (228), Expect(3) = 1e-58
Identities = 42/61 (68%), Positives = 51/61 (83%), Gaps = 1/61 (1%)
Frame = +2
Query: 44 FKSIVENQFDYKIKTLYSDNGGEFIKLRPFLKKHGISHLTTPPYTPEY-GLSERKHHHLV 220
F ++VEN+F +KI TLYSDNGGEFI +R FL HGISH+TTPP+TPE G+SERKH H+V
Sbjct: 576 FTALVENKFKFKIGTLYSDNGGEFIAMRSFLASHGISHMTTPPHTPELNGISERKHRHIV 635
Query: 221 E 223
E
Sbjct: 636 E 636
Score = 25.0 bits (53), Expect(3) = 1e-58
Identities = 29/106 (27%), Positives = 43/106 (40%), Gaps = 23/106 (21%)
Frame = +3
Query: 630 PTSSLPH-----------------PLSITHHSP-SPPCL*QDQATTSNSD-----NLTPS 740
P+ S PH LS++ SP + P L ++ NS+ + P
Sbjct: 792 PSCSAPHRSPSQSENLSPPAPLQPSLSLSPTSPITSPSLSEESLVGHNSETGPTGSSPPL 851
Query: 741 MYLPESPQHSASR*LSTSPHPNL*PPTAHSPPPSILPDEYLNTLSS 878
P+ PQ + + STSPH + P +SP P P TL+S
Sbjct: 852 SPQPQRPQPQSPQ--STSPHSS--SPQPNSPNPQHSPRSLTPTLTS 893
Score = 84.0 bits (206), Expect(2) = 2e-23
Identities = 55/153 (35%), Positives = 77/153 (50%), Gaps = 10/153 (6%)
Frame = +2
Query: 776 PLTLHITTPESLTSYCTFSSTLHTTRRVPEHLIFAKEPAPRAT-------HPMTTRSING 934
P + T+P S + + H+ R + L + P+P H M TRS N
Sbjct: 860 PQSPQSTSPHSSSPQPNSPNPQHSPRSLTPTLTSSPSPSPPPNPNPPPIQHTMRTRSKNN 919
Query: 935 IFKP--KQLHLATKFPTPA-PIEPSCYTQALKIPEWKTTMS*EFTALMANGTWTLVPKQD 1105
I KP K +LATK PTP PI P +AL P W+ M E A NGT+ LVP
Sbjct: 920 IVKPNPKFANLATK-PTPLKPIIPKTVVEALLDPNWRQAMCDEINAQTRNGTFDLVPPAP 978
Query: 1106 HFNIIGNKWVYRIKHNTDGTITWYKTHLVRRGF 1204
+ N++G KWV+ +K+ ++G + YK LV +GF
Sbjct: 979 NQNVVGCKWVFTLKYLSNGVLDRYKARLVAKGF 1011
Score = 53.1 bits (126), Expect(2) = 2e-23
Identities = 25/49 (51%), Positives = 35/49 (71%)
Frame = +1
Query: 1192 AKGFLQRPDIDYNDTFSHVIKPQTIKLVLCVALSRNWPLIQMDVNNVFL 1338
AKGF Q+ D+ +TFS VIK T++ VL +A+S+ W + Q+DVNN FL
Sbjct: 1008 AKGFHQQYGHDFKETFSPVIKSTTVRSVLHIAVSKGWSIRQIDVNNAFL 1056
>gb|AAC02669.1| polyprotein [Arabidopsis thaliana]
Length = 1451
Score = 159 bits (401), Expect(3) = 1e-58
Identities = 82/146 (56%), Positives = 99/146 (67%), Gaps = 6/146 (4%)
Frame = +1
Query: 223 TTCSILHHASLPLTFWSYALQTAAYLINRMPTSVLRNMSPFDILFRHPPNYSKLHVFGCL 402
T ++L AS+P +WSYA TA YLINRM T VL N SP+ LF PPNY KL +FGCL
Sbjct: 637 TGLTLLSTASMPKEYWSYAFATAVYLINRMLTPVLGNESPYVKLFGQPPNYLKLRIFGCL 696
Query: 403 CFPWLAPYTTNKLQSKSIPCVFLDYITTQSAYLCFDPSSGKTYTSRHVQFVEDSFP---- 570
CFPWL PYT +KL ++S+PCV L Y +QSAYLC D ++G+ YTSRHVQF E SFP
Sbjct: 697 CFPWLRPYTAHKLDNRSVPCVLLGYSLSQSAYLCLDRATGRVYTSRHVQFAESSFPFSTT 756
Query: 571 SPVI--PLPRPLILSTLIVTIFPLLA 642
SP + P PL T V++ PLLA
Sbjct: 757 SPSVTPPSDPPLSQDTRPVSV-PLLA 781
Score = 92.4 bits (228), Expect(3) = 1e-58
Identities = 42/61 (68%), Positives = 51/61 (83%), Gaps = 1/61 (1%)
Frame = +2
Query: 44 FKSIVENQFDYKIKTLYSDNGGEFIKLRPFLKKHGISHLTTPPYTPEY-GLSERKHHHLV 220
F ++VEN+F +KI TLYSDNGGEFI +R FL HGISH+TTPP+TPE G+SERKH H+V
Sbjct: 576 FTALVENKFKFKIGTLYSDNGGEFIAMRSFLASHGISHMTTPPHTPELNGISERKHRHIV 635
Query: 221 E 223
E
Sbjct: 636 E 636
Score = 25.0 bits (53), Expect(3) = 1e-58
Identities = 29/106 (27%), Positives = 43/106 (40%), Gaps = 23/106 (21%)
Frame = +3
Query: 630 PTSSLPH-----------------PLSITHHSP-SPPCL*QDQATTSNSD-----NLTPS 740
P+ S PH LS++ SP + P L ++ NS+ + P
Sbjct: 792 PSCSAPHRSPSQSENLSPPAPLQPSLSLSPTSPITSPSLSEESLVGHNSETGPTGSSPPL 851
Query: 741 MYLPESPQHSASR*LSTSPHPNL*PPTAHSPPPSILPDEYLNTLSS 878
P+ PQ + + STSPH + P +SP P P TL+S
Sbjct: 852 SPQPQRPQPQSPQ--STSPHSS--SPQPNSPNPQHSPRSLTPTLTS 893
Score = 84.0 bits (206), Expect(2) = 4e-23
Identities = 55/153 (35%), Positives = 77/153 (50%), Gaps = 10/153 (6%)
Frame = +2
Query: 776 PLTLHITTPESLTSYCTFSSTLHTTRRVPEHLIFAKEPAPRAT-------HPMTTRSING 934
P + T+P S + + H+ R + L + P+P H M TRS N
Sbjct: 860 PQSPQSTSPHSSSPQPNSPNPQHSPRSLTPTLTSSPSPSPPPNPNPPPIQHTMRTRSKNN 919
Query: 935 IFKP--KQLHLATKFPTPA-PIEPSCYTQALKIPEWKTTMS*EFTALMANGTWTLVPKQD 1105
I KP K +LATK PTP PI P +AL P W+ M E A NGT+ LVP
Sbjct: 920 IVKPNPKFANLATK-PTPLKPIIPKTVVEALLDPNWRQAMCDEINAQTRNGTFDLVPPAP 978
Query: 1106 HFNIIGNKWVYRIKHNTDGTITWYKTHLVRRGF 1204
+ N++G KWV+ +K+ ++G + YK LV +GF
Sbjct: 979 NQNVVGCKWVFTLKYLSNGVLDRYKARLVAKGF 1011
Score = 52.4 bits (124), Expect(2) = 4e-23
Identities = 25/49 (51%), Positives = 35/49 (71%)
Frame = +1
Query: 1192 AKGFLQRPDIDYNDTFSHVIKPQTIKLVLCVALSRNWPLIQMDVNNVFL 1338
AKGF Q+ D+ +TFS VIK T++ VL +A+S+ W + Q+DVNN FL
Sbjct: 1008 AKGFHQQYGHDFKETFSPVIKLTTVRSVLHIAVSKGWSIRQIDVNNAFL 1056
>gb|AAK43485.1|AC084807_10 polyprotein, putative [Arabidopsis thaliana]
gi|225898008|dbj|BAH30336.1| hypothetical protein
[Arabidopsis thaliana]
Length = 1459
Score = 144 bits (364), Expect(3) = 5e-56
Identities = 67/116 (57%), Positives = 80/116 (68%)
Frame = +1
Query: 223 TTCSILHHASLPLTFWSYALQTAAYLINRMPTSVLRNMSPFDILFRHPPNYSKLHVFGCL 402
T ++L AS+P +W+YA TA YLINRMPT VL SPF LF PNY +L VFGCL
Sbjct: 641 TGLTLLTQASVPREYWTYAFATAVYLINRMPTPVLCLQSPFQKLFGSSPNYQRLRVFGCL 700
Query: 403 CFPWLAPYTTNKLQSKSIPCVFLDYITTQSAYLCFDPSSGKTYTSRHVQFVEDSFP 570
CFPWL PYT NKL+ +S CVFL Y TQ+AYLC D + + YTSRHV F E ++P
Sbjct: 701 CFPWLRPYTRNKLEERSKRCVFLGYSLTQTAYLCLDVDNNRLYTSRHVMFDESTYP 756
Score = 93.6 bits (231), Expect(3) = 5e-56
Identities = 44/61 (72%), Positives = 53/61 (86%), Gaps = 1/61 (1%)
Frame = +2
Query: 44 FKSIVENQFDYKIKTLYSDNGGEFIKLRPFLKKHGISHLTTPPYTPEY-GLSERKHHHLV 220
FK++VEN+F KI+TLYSDNGGEFI LR FL +GISHLT+PP+TPE+ GLSERKH H+V
Sbjct: 580 FKALVENRFQAKIRTLYSDNGGEFIALRDFLVSNGISHLTSPPHTPEHNGLSERKHRHIV 639
Query: 221 E 223
E
Sbjct: 640 E 640
Score = 29.3 bits (64), Expect(3) = 5e-56
Identities = 31/95 (32%), Positives = 41/95 (43%), Gaps = 9/95 (9%)
Frame = +3
Query: 585 TSPSSDSLDSYCHN-FPTS--SLPHPLSITHHSPSPPCL*QDQATTSN-SDNLTPSMYLP 752
T P S S S ++ FP S L P + + +PSPP D + + + TPS +
Sbjct: 771 TPPESSSSSSPANSGFPCSVLRLQSPPASSPETPSPPQQQNDSPVSPRQTGSPTPSHHSQ 830
Query: 753 E-----SPQHSASR*LSTSPHPNL*PPTAHSPPPS 842
SP S S T+PH N P A S P S
Sbjct: 831 VRDSTLSPSPSVSNSEPTAPHENGPEPEAQSNPNS 865
Score = 82.8 bits (203), Expect(2) = 6e-26
Identities = 44/110 (40%), Positives = 61/110 (55%), Gaps = 1/110 (0%)
Frame = +2
Query: 878 AKEPAPRATHPMTTRSINGIFKPK-QLHLATKFPTPAPIEPSCYTQALKIPEWKTTMS*E 1054
++ P+ H M TRS N I KPK + L P EP+ TQALK +W+ MS E
Sbjct: 910 SRSQPPKNNHQMKTRSKNNITKPKTKTSLTVALTQPHLSEPNTVTQALKDKKWRFAMSDE 969
Query: 1055 FTALMANGTWTLVPKQDHFNIIGNKWVYRIKHNTDGTITWYKTHLVRRGF 1204
F A N TW LVP +++G +WV+++K+ +G I YK LV +GF
Sbjct: 970 FDAQQRNHTWDLVPPNPTQHLVGCRWVFKLKYLPNGLIDKYKARLVAKGF 1019
Score = 63.2 bits (152), Expect(2) = 6e-26
Identities = 30/49 (61%), Positives = 38/49 (77%)
Frame = +1
Query: 1192 AKGFLQRPDIDYNDTFSHVIKPQTIKLVLCVALSRNWPLIQMDVNNVFL 1338
AKGF Q+ +DY +TFS VIK TI++VL VA+ +NWPL Q+DVNN FL
Sbjct: 1016 AKGFNQQYGVDYAETFSPVIKATTIRVVLDVAVKKNWPLKQLDVNNAFL 1064
>emb|CAN70473.1| hypothetical protein VITISV_037490 [Vitis vinifera]
Length = 786
Score = 155 bits (393), Expect(2) = 4e-55
Identities = 72/136 (52%), Positives = 94/136 (69%), Gaps = 4/136 (2%)
Frame = +1
Query: 232 SILHHASLPLTFWSYALQTAAYLINRMPTSVLRNMSPFDILFRHPPNYSKLHVFGCLCFP 411
++L HAS LTFW++ TA YLINRMPT L SP++ +F PPNYSKL +FGCLC+P
Sbjct: 333 TLLSHASFSLTFWTHVFATAVYLINRMPTPTLNLSSPYENIFGSPPNYSKLRIFGCLCYP 392
Query: 412 WLAPYTTNKLQSKSIPCVFLDYITTQSAYLCFDPSSGKTYTSRHVQFVEDSFPSPVIPL- 588
WL PY++ KL+S+S PC+FL Y TQSAYLC+ P + + Y SRHV+F E FPS + +
Sbjct: 393 WLRPYSSRKLESRSKPCIFLGYSLTQSAYLCYHPPTSRMYVSRHVKFGESVFPSLTLSMP 452
Query: 589 ---PRPLILSTLIVTI 627
P+P +ST I I
Sbjct: 453 SAYPQPDTVSTWIPPI 468
Score = 87.8 bits (216), Expect(2) = 4e-55
Identities = 40/62 (64%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Frame = +2
Query: 44 FKSIVENQFDYKIKTLYSDNGGEFIKLRPFLKKHGISHLTTPPYTPEY-GLSERKHHHLV 220
FK+IVE F KI TLYSDNGGE++ LR FL HGI+HL+TPP+TPE+ G SER+H H+V
Sbjct: 269 FKAIVETHFQNKIHTLYSDNGGEYLALRTFLATHGITHLSTPPHTPEHNGYSERRHRHIV 328
Query: 221 EL 226
E+
Sbjct: 329 EI 330
Score = 63.2 bits (152), Expect(2) = 2e-15
Identities = 29/49 (59%), Positives = 35/49 (71%)
Frame = +1
Query: 1192 AKGFLQRPDIDYNDTFSHVIKPQTIKLVLCVALSRNWPLIQMDVNNVFL 1338
AKGF Q P IDY DTFS V+KP ++LVL + +S W L Q+DVNN FL
Sbjct: 530 AKGFHQGPGIDYQDTFSPVVKPTIVRLVLSLVVSHGWSLRQLDVNNAFL 578
Score = 47.0 bits (110), Expect(2) = 2e-15
Identities = 31/112 (27%), Positives = 49/112 (43%), Gaps = 12/112 (10%)
Frame = +2
Query: 905 HPMTTRSI--------NGIFKPKQLHLATKFPTPAPIE----PSCYTQALKIPEWKTTMS 1048
HP T+R +F L + + +P P + P Q K+P +T
Sbjct: 425 HPPTSRMYVSRHVKFGESVFPSLTLSMPSAYPQPDTVSTWIPPIITFQPTKLPPGHSTHH 484
Query: 1049 *EFTALMANGTWTLVPKQDHFNIIGNKWVYRIKHNTDGTITWYKTHLVRRGF 1204
+F LVP NI+G KW++ KH++DG++ +K LV +GF
Sbjct: 485 LQFNL---KDNPHLVPLDSSHNIVGCKWIFVTKHHSDGSVDRHKARLVAKGF 533
>gb|AAC02672.1| polyprotein [Arabidopsis arenosa]
Length = 1390
Score = 152 bits (383), Expect(2) = 5e-55
Identities = 79/146 (54%), Positives = 97/146 (66%), Gaps = 6/146 (4%)
Frame = +1
Query: 223 TTCSILHHASLPLTFWSYALQTAAYLINRMPTSVLRNMSPFDILFRHPPNYSKLHVFGCL 402
T ++L AS+ +WSYA TA YLINRM T VL N SP+ LF PPNY KL VFGCL
Sbjct: 637 TGLTLLSTASMSKEYWSYAFTTAVYLINRMLTPVLGNESPYMKLFGQPPNYLKLRVFGCL 696
Query: 403 CFPWLAPYTTNKLQSKSIPCVFLDYITTQSAYLCFDPSSGKTYTSRHVQFVEDSFP---- 570
CFPWL PYT +KL ++S+PCV L Y +QSAYLC D ++G+ YTSRHVQF E FP
Sbjct: 697 CFPWLRPYTAHKLDNRSMPCVLLGYSLSQSAYLCLDRATGRVYTSRHVQFAESIFPFSTT 756
Query: 571 SPVI--PLPRPLILSTLIVTIFPLLA 642
SP + P PL T +++ P+LA
Sbjct: 757 SPSVTPPSDPPLSQDTRPISV-PILA 781
Score = 91.3 bits (225), Expect(2) = 5e-55
Identities = 43/61 (70%), Positives = 50/61 (81%), Gaps = 1/61 (1%)
Frame = +2
Query: 44 FKSIVENQFDYKIKTLYSDNGGEFIKLRPFLKKHGISHLTTPPYTPEY-GLSERKHHHLV 220
F ++VEN+F KI TLYSDNGGEFI LR FL HGISH+TTPP+TPE G+SERKH H+V
Sbjct: 576 FTALVENKFKSKIGTLYSDNGGEFIALRSFLASHGISHMTTPPHTPELNGISERKHRHIV 635
Query: 221 E 223
E
Sbjct: 636 E 636
Score = 85.1 bits (209), Expect(2) = 9e-24
Identities = 57/154 (37%), Positives = 76/154 (49%), Gaps = 11/154 (7%)
Frame = +2
Query: 776 PLTLHITTPESLTSYCTFSSTLHTTRRVPEHLIFAKEPAPRAT--------HPMTTRSIN 931
P + T+P S + T H+ R + L + P+P H M TRS N
Sbjct: 855 PQSEQSTSPRSTSPQPNSPHTQHSPRSITPALTPSPSPSPPPNPNPPPPIQHTMRTRSKN 914
Query: 932 GIFKP--KQLHLATKFPTPA-PIEPSCYTQALKIPEWKTTMS*EFTALMANGTWTLVPKQ 1102
I KP K +LATK PTP PI P +AL P W+ M E A NGT+ LVP
Sbjct: 915 NIVKPNPKFANLATK-PTPLKPIIPKTVAEALLDPNWRQAMCDEINAQTRNGTFDLVPPA 973
Query: 1103 DHFNIIGNKWVYRIKHNTDGTITWYKTHLVRRGF 1204
+ N+IG KWV+ +K+ +G + YK LV +GF
Sbjct: 974 PNQNVIGCKWVFTLKYLPNGVLDRYKARLVAKGF 1007
Score = 53.5 bits (127), Expect(2) = 9e-24
Identities = 26/49 (53%), Positives = 35/49 (71%)
Frame = +1
Query: 1192 AKGFLQRPDIDYNDTFSHVIKPQTIKLVLCVALSRNWPLIQMDVNNVFL 1338
AKGF Q+ D+ +TFS VIK T++ VL VA+S+ W + Q+DVNN FL
Sbjct: 1004 AKGFHQQYGHDFKETFSPVIKSTTVRSVLHVAVSKGWSIRQIDVNNAFL 1052
>dbj|BAM42650.1| Polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 145 bits (366), Expect(2) = 1e-53
Identities = 66/113 (58%), Positives = 78/113 (69%)
Frame = +1
Query: 232 SILHHASLPLTFWSYALQTAAYLINRMPTSVLRNMSPFDILFRHPPNYSKLHVFGCLCFP 411
+IL HAS+P T+W YA A YLINR+PT +L+ SPF LF PPNY KL VFGC C+P
Sbjct: 636 TILSHASVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYP 695
Query: 412 WLAPYTTNKLQSKSIPCVFLDYITTQSAYLCFDPSSGKTYTSRHVQFVEDSFP 570
WL PY +KL+ KS C F+ Y TQSAYLC +G+ YTSRHVQF E FP
Sbjct: 696 WLRPYNRHKLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFP 748
Score = 93.2 bits (230), Expect(2) = 1e-53
Identities = 42/62 (67%), Positives = 53/62 (85%), Gaps = 1/62 (1%)
Frame = +2
Query: 44 FKSIVENQFDYKIKTLYSDNGGEFIKLRPFLKKHGISHLTTPPYTPEY-GLSERKHHHLV 220
FKS+VEN+F +I TLYSDNGGEF+ LR +L +HGISH T+PP+TPE+ GLSERKH H+V
Sbjct: 572 FKSLVENRFQTRIGTLYSDNGGEFVVLRDYLSQHGISHFTSPPHTPEHNGLSERKHRHIV 631
Query: 221 EL 226
E+
Sbjct: 632 EM 633
Score = 74.3 bits (181), Expect(2) = 9e-24
Identities = 50/140 (35%), Positives = 69/140 (49%), Gaps = 2/140 (1%)
Frame = +2
Query: 791 ITTPESLTSYCTFSSTLHTTRRVPEHLIFAKEPAPRATHPMTTRSINGIFKPKQLH-LAT 967
I+ P S +S T + L P +I AP TH M TR+ +GI KP Q + AT
Sbjct: 892 ISEPNSPSSSSTSTPPLPPVLPAPP-IIQVNAQAPVNTHSMATRAKDGIRKPNQKYSYAT 950
Query: 968 KFPTPAPIEPSCYTQALKIPEWKTTMS*EFTALMANGTWTLVPKQD-HFNIIGNKWVYRI 1144
A EP QA+K W+ M E A + N TW LVP I+G +W++
Sbjct: 951 SLA--ANSEPRTAIQAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTK 1008
Query: 1145 KHNTDGTITWYKTHLVRRGF 1204
K N+DG++ YK LV +G+
Sbjct: 1009 KFNSDGSLNRYKARLVAKGY 1028
Score = 64.3 bits (155), Expect(2) = 9e-24
Identities = 29/49 (59%), Positives = 39/49 (79%)
Frame = +1
Query: 1192 AKGFLQRPDIDYNDTFSHVIKPQTIKLVLCVALSRNWPLIQMDVNNVFL 1338
AKG+ QRP +DY +TFS VIK +I++VL VA+ R+WP+ Q+DVNN FL
Sbjct: 1025 AKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFL 1073
>dbj|BAA78426.1| polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 144 bits (364), Expect(2) = 2e-53
Identities = 65/113 (57%), Positives = 78/113 (69%)
Frame = +1
Query: 232 SILHHASLPLTFWSYALQTAAYLINRMPTSVLRNMSPFDILFRHPPNYSKLHVFGCLCFP 411
++L HAS+P T+W YA A YLINR+PT +L+ SPF LF PPNY KL VFGC C+P
Sbjct: 636 TLLSHASVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYP 695
Query: 412 WLAPYTTNKLQSKSIPCVFLDYITTQSAYLCFDPSSGKTYTSRHVQFVEDSFP 570
WL PY +KL+ KS C F+ Y TQSAYLC +G+ YTSRHVQF E FP
Sbjct: 696 WLRPYNRHKLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFP 748
Score = 93.2 bits (230), Expect(2) = 2e-53
Identities = 42/62 (67%), Positives = 53/62 (85%), Gaps = 1/62 (1%)
Frame = +2
Query: 44 FKSIVENQFDYKIKTLYSDNGGEFIKLRPFLKKHGISHLTTPPYTPEY-GLSERKHHHLV 220
FKS+VEN+F +I TLYSDNGGEF+ LR +L +HGISH T+PP+TPE+ GLSERKH H+V
Sbjct: 572 FKSLVENRFQTRIGTLYSDNGGEFVVLRDYLSQHGISHFTSPPHTPEHNGLSERKHRHIV 631
Query: 221 EL 226
E+
Sbjct: 632 EM 633
Score = 72.8 bits (177), Expect(2) = 2e-23
Identities = 49/140 (35%), Positives = 69/140 (49%), Gaps = 2/140 (1%)
Frame = +2
Query: 791 ITTPESLTSYCTFSSTLHTTRRVPEHLIFAKEPAPRATHPMTTRSINGIFKPKQLH-LAT 967
I+ P S +S T + L P +I AP TH M TR+ +GI KP Q + AT
Sbjct: 892 ISEPNSPSSSSTSTPPLPPVLPAPP-IIQVNAQAPVNTHSMATRAKDGIRKPNQKYSYAT 950
Query: 968 KFPTPAPIEPSCYTQALKIPEWKTTMS*EFTALMANGTWTLVPKQD-HFNIIGNKWVYRI 1144
A EP QA+K W+ M + A + N TW LVP I+G +W++
Sbjct: 951 SLA--ANSEPRTAIQAMKDDRWRQAMGSKINAQIGNHTWDLVPPPPPSVTIVGCRWIFTK 1008
Query: 1145 KHNTDGTITWYKTHLVRRGF 1204
K N+DG++ YK LV +G+
Sbjct: 1009 KFNSDGSLNRYKARLVAKGY 1028
Score = 64.3 bits (155), Expect(2) = 2e-23
Identities = 29/49 (59%), Positives = 39/49 (79%)
Frame = +1
Query: 1192 AKGFLQRPDIDYNDTFSHVIKPQTIKLVLCVALSRNWPLIQMDVNNVFL 1338
AKG+ QRP +DY +TFS VIK +I++VL VA+ R+WP+ Q+DVNN FL
Sbjct: 1025 AKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFL 1073
>dbj|BAM42649.1| Polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 144 bits (364), Expect(2) = 2e-53
Identities = 65/113 (57%), Positives = 78/113 (69%)
Frame = +1
Query: 232 SILHHASLPLTFWSYALQTAAYLINRMPTSVLRNMSPFDILFRHPPNYSKLHVFGCLCFP 411
++L HAS+P T+W YA A YLINR+PT +L+ SPF LF PPNY KL VFGC C+P
Sbjct: 636 TLLSHASVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYP 695
Query: 412 WLAPYTTNKLQSKSIPCVFLDYITTQSAYLCFDPSSGKTYTSRHVQFVEDSFP 570
WL PY +KL+ KS C F+ Y TQSAYLC +G+ YTSRHVQF E FP
Sbjct: 696 WLRPYNRHKLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFP 748
Score = 93.2 bits (230), Expect(2) = 2e-53
Identities = 42/62 (67%), Positives = 53/62 (85%), Gaps = 1/62 (1%)
Frame = +2
Query: 44 FKSIVENQFDYKIKTLYSDNGGEFIKLRPFLKKHGISHLTTPPYTPEY-GLSERKHHHLV 220
FKS+VEN+F +I TLYSDNGGEF+ LR +L +HGISH T+PP+TPE+ GLSERKH H+V
Sbjct: 572 FKSLVENRFQTRIGTLYSDNGGEFVVLRDYLSQHGISHFTSPPHTPEHNGLSERKHRHIV 631
Query: 221 EL 226
E+
Sbjct: 632 EM 633
Score = 74.3 bits (181), Expect(2) = 9e-24
Identities = 50/140 (35%), Positives = 69/140 (49%), Gaps = 2/140 (1%)
Frame = +2
Query: 791 ITTPESLTSYCTFSSTLHTTRRVPEHLIFAKEPAPRATHPMTTRSINGIFKPKQLH-LAT 967
I+ P S +S T + L P +I AP TH M TR+ +GI KP Q + AT
Sbjct: 892 ISEPNSPSSSSTSTPPLPPVLPAPP-IIQVNAQAPVNTHSMATRAKDGIRKPNQKYSYAT 950
Query: 968 KFPTPAPIEPSCYTQALKIPEWKTTMS*EFTALMANGTWTLVPKQD-HFNIIGNKWVYRI 1144
A EP QA+K W+ M E A + N TW LVP I+G +W++
Sbjct: 951 SLA--ANSEPRTAIQAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTK 1008
Query: 1145 KHNTDGTITWYKTHLVRRGF 1204
K N+DG++ YK LV +G+
Sbjct: 1009 KFNSDGSLNRYKARLVAKGY 1028
Score = 64.3 bits (155), Expect(2) = 9e-24
Identities = 29/49 (59%), Positives = 39/49 (79%)
Frame = +1
Query: 1192 AKGFLQRPDIDYNDTFSHVIKPQTIKLVLCVALSRNWPLIQMDVNNVFL 1338
AKG+ QRP +DY +TFS VIK +I++VL VA+ R+WP+ Q+DVNN FL
Sbjct: 1025 AKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFL 1073
>dbj|BAM42647.1| polyprotein [Arabidopsis thaliana] gi|403406144|dbj|BAM42648.1|
polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 144 bits (364), Expect(2) = 2e-53
Identities = 65/113 (57%), Positives = 78/113 (69%)
Frame = +1
Query: 232 SILHHASLPLTFWSYALQTAAYLINRMPTSVLRNMSPFDILFRHPPNYSKLHVFGCLCFP 411
++L HAS+P T+W YA A YLINR+PT +L+ SPF LF PPNY KL VFGC C+P
Sbjct: 636 TLLSHASVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYP 695
Query: 412 WLAPYTTNKLQSKSIPCVFLDYITTQSAYLCFDPSSGKTYTSRHVQFVEDSFP 570
WL PY +KL+ KS C F+ Y TQSAYLC +G+ YTSRHVQF E FP
Sbjct: 696 WLRPYNRHKLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFP 748
Score = 93.2 bits (230), Expect(2) = 2e-53
Identities = 42/62 (67%), Positives = 53/62 (85%), Gaps = 1/62 (1%)
Frame = +2
Query: 44 FKSIVENQFDYKIKTLYSDNGGEFIKLRPFLKKHGISHLTTPPYTPEY-GLSERKHHHLV 220
FKS+VEN+F +I TLYSDNGGEF+ LR +L +HGISH T+PP+TPE+ GLSERKH H+V
Sbjct: 572 FKSLVENRFQTRIGTLYSDNGGEFVVLRDYLSQHGISHFTSPPHTPEHNGLSERKHRHIV 631
Query: 221 EL 226
E+
Sbjct: 632 EM 633
Score = 74.3 bits (181), Expect(2) = 9e-24
Identities = 50/140 (35%), Positives = 69/140 (49%), Gaps = 2/140 (1%)
Frame = +2
Query: 791 ITTPESLTSYCTFSSTLHTTRRVPEHLIFAKEPAPRATHPMTTRSINGIFKPKQLH-LAT 967
I+ P S +S T + L P +I AP TH M TR+ +GI KP Q + AT
Sbjct: 892 ISEPNSPSSSSTSTPPLPPVLPAPP-IIQVNAQAPVNTHSMATRAKDGIRKPNQKYSYAT 950
Query: 968 KFPTPAPIEPSCYTQALKIPEWKTTMS*EFTALMANGTWTLVPKQD-HFNIIGNKWVYRI 1144
A EP QA+K W+ M E A + N TW LVP I+G +W++
Sbjct: 951 SLA--ANSEPRTAIQAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTK 1008
Query: 1145 KHNTDGTITWYKTHLVRRGF 1204
K N+DG++ YK LV +G+
Sbjct: 1009 KFNSDGSLNRYKARLVAKGY 1028
Score = 64.3 bits (155), Expect(2) = 9e-24
Identities = 29/49 (59%), Positives = 39/49 (79%)
Frame = +1
Query: 1192 AKGFLQRPDIDYNDTFSHVIKPQTIKLVLCVALSRNWPLIQMDVNNVFL 1338
AKG+ QRP +DY +TFS VIK +I++VL VA+ R+WP+ Q+DVNN FL
Sbjct: 1025 AKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFL 1073
>dbj|BAM42646.1| polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 144 bits (364), Expect(2) = 2e-53
Identities = 65/113 (57%), Positives = 78/113 (69%)
Frame = +1
Query: 232 SILHHASLPLTFWSYALQTAAYLINRMPTSVLRNMSPFDILFRHPPNYSKLHVFGCLCFP 411
++L HAS+P T+W YA A YLINR+PT +L+ SPF LF PPNY KL VFGC C+P
Sbjct: 636 TLLSHASVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYP 695
Query: 412 WLAPYTTNKLQSKSIPCVFLDYITTQSAYLCFDPSSGKTYTSRHVQFVEDSFP 570
WL PY +KL+ KS C F+ Y TQSAYLC +G+ YTSRHVQF E FP
Sbjct: 696 WLRPYNRHKLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFP 748
Score = 93.2 bits (230), Expect(2) = 2e-53
Identities = 42/62 (67%), Positives = 53/62 (85%), Gaps = 1/62 (1%)
Frame = +2
Query: 44 FKSIVENQFDYKIKTLYSDNGGEFIKLRPFLKKHGISHLTTPPYTPEY-GLSERKHHHLV 220
FKS+VEN+F +I TLYSDNGGEF+ LR +L +HGISH T+PP+TPE+ GLSERKH H+V
Sbjct: 572 FKSLVENRFQTRIGTLYSDNGGEFVVLRDYLSQHGISHFTSPPHTPEHNGLSERKHRHIV 631
Query: 221 EL 226
E+
Sbjct: 632 EM 633
Score = 74.3 bits (181), Expect(2) = 9e-24
Identities = 50/140 (35%), Positives = 69/140 (49%), Gaps = 2/140 (1%)
Frame = +2
Query: 791 ITTPESLTSYCTFSSTLHTTRRVPEHLIFAKEPAPRATHPMTTRSINGIFKPKQLH-LAT 967
I+ P S +S T + L P +I AP TH M TR+ +GI KP Q + AT
Sbjct: 892 ISEPNSPSSSSTSTPPLPPVLPAPP-IIQVNAQAPVNTHSMATRAKDGIRKPNQKYSYAT 950
Query: 968 KFPTPAPIEPSCYTQALKIPEWKTTMS*EFTALMANGTWTLVPKQD-HFNIIGNKWVYRI 1144
A EP QA+K W+ M E A + N TW LVP I+G +W++
Sbjct: 951 SLA--ANSEPRTAIQAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTK 1008
Query: 1145 KHNTDGTITWYKTHLVRRGF 1204
K N+DG++ YK LV +G+
Sbjct: 1009 KFNSDGSLNRYKARLVAKGY 1028
Score = 64.3 bits (155), Expect(2) = 9e-24
Identities = 29/49 (59%), Positives = 39/49 (79%)
Frame = +1
Query: 1192 AKGFLQRPDIDYNDTFSHVIKPQTIKLVLCVALSRNWPLIQMDVNNVFL 1338
AKG+ QRP +DY +TFS VIK +I++VL VA+ R+WP+ Q+DVNN FL
Sbjct: 1025 AKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFL 1073
>emb|CAB46043.1| retrotransposon like protein [Arabidopsis thaliana]
gi|7268438|emb|CAB80958.1| retrotransposon like protein
[Arabidopsis thaliana]
Length = 1474
Score = 144 bits (363), Expect(2) = 2e-53
Identities = 83/193 (43%), Positives = 98/193 (50%)
Frame = +1
Query: 223 TTCSILHHASLPLTFWSYALQTAAYLINRMPTSVLRNMSPFDILFRHPPNYSKLHVFGCL 402
T ++L AS+P +W YA A YLINRMPT VL SPF LF PNY +L VFGCL
Sbjct: 636 TGLTLLTQASVPREYWPYAFAAAVYLINRMPTPVLSMESPFQKLFGSKPNYERLRVFGCL 695
Query: 403 CFPWLAPYTTNKLQSKSIPCVFLDYITTQSAYLCFDPSSGKTYTSRHVQFVEDSFPSPVI 582
CFPWL PYT NKL+ +S CVFL Y TQ+AYLCFD + YTSRHV F E SFP +
Sbjct: 696 CFPWLRPYTHNKLEERSRRCVFLGYSLTQTAYLCFDVEHKRLYTSRHVVFDEASFPFSNL 755
Query: 583 PLPRPLILSTLIVTIFPLLACXXXXXXXXXXXXXXVCNKIKLQHLTPIILHHPCIFLSLP 762
L T + PL+ C + Q P + S P
Sbjct: 756 TSQNSLPTVTFEQSSSPLVTPILSSSSVLPSCLSSPCTVLHQQQ--PPVTTPNSPHSSQP 813
Query: 763 NIAPPVDSPHHHT 801
+P SPH T
Sbjct: 814 TTSPAPLSPHRST 826
Score = 93.6 bits (231), Expect(2) = 2e-53
Identities = 44/61 (72%), Positives = 53/61 (86%), Gaps = 1/61 (1%)
Frame = +2
Query: 44 FKSIVENQFDYKIKTLYSDNGGEFIKLRPFLKKHGISHLTTPPYTPEY-GLSERKHHHLV 220
FK++VEN+F KI+TLYSDNGGEFI LR FL +GISHLT+PP+TPE+ GLSERKH H+V
Sbjct: 575 FKALVENRFQAKIRTLYSDNGGEFIALREFLVSNGISHLTSPPHTPEHNGLSERKHRHIV 634
Query: 221 E 223
E
Sbjct: 635 E 635
Score = 80.1 bits (196), Expect(2) = 9e-24
Identities = 43/101 (42%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
Frame = +2
Query: 905 HPMTTRSINGIFKPK-QLHLATKFPTPAPIEPSCYTQALKIPEWKTTMS*EFTALMANGT 1081
H M TR+ N I KP + L P +P EP+ TQALK +W+ MS EF A N T
Sbjct: 935 HNMKTRAKNNIKKPNTKFSLTATLPNRSPSEPTNVTQALKDKKWRFAMSDEFDAQQRNHT 994
Query: 1082 WTLVPKQDHFNIIGNKWVYRIKHNTDGTITWYKTHLVRRGF 1204
W LVP + ++G KWV+++K+ +G I YK LV +GF
Sbjct: 995 WDLVPHESQL-LVGCKWVFKLKYLPNGAIDKYKARLVAKGF 1034
Score = 58.5 bits (140), Expect(2) = 9e-24
Identities = 28/49 (57%), Positives = 37/49 (75%)
Frame = +1
Query: 1192 AKGFLQRPDIDYNDTFSHVIKPQTIKLVLCVALSRNWPLIQMDVNNVFL 1338
AKGF Q+ +DY +TFS VIK TI+LVL VA+ ++W + Q+DVNN FL
Sbjct: 1031 AKGFNQQYGVDYAETFSPVIKSTTIRLVLDVAVKKDWEIKQLDVNNAFL 1079
>gb|AAC79110.1| putative polyprotein of LTR transposon [Arabidopsis thaliana]
gi|7269781|emb|CAB77781.1| putative polyprotein of LTR
transposon [Arabidopsis thaliana]
Length = 1456
Score = 144 bits (364), Expect(2) = 2e-53
Identities = 65/113 (57%), Positives = 78/113 (69%)
Frame = +1
Query: 232 SILHHASLPLTFWSYALQTAAYLINRMPTSVLRNMSPFDILFRHPPNYSKLHVFGCLCFP 411
++L HAS+P T+W YA A YLINR+PT +L+ SPF LF PPNY KL VFGC C+P
Sbjct: 617 TLLSHASVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYP 676
Query: 412 WLAPYTTNKLQSKSIPCVFLDYITTQSAYLCFDPSSGKTYTSRHVQFVEDSFP 570
WL PY +KL+ KS C F+ Y TQSAYLC +G+ YTSRHVQF E FP
Sbjct: 677 WLRPYNRHKLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFP 729
Score = 93.2 bits (230), Expect(2) = 2e-53
Identities = 42/62 (67%), Positives = 53/62 (85%), Gaps = 1/62 (1%)
Frame = +2
Query: 44 FKSIVENQFDYKIKTLYSDNGGEFIKLRPFLKKHGISHLTTPPYTPEY-GLSERKHHHLV 220
FKS+VEN+F +I TLYSDNGGEF+ LR +L +HGISH T+PP+TPE+ GLSERKH H+V
Sbjct: 553 FKSLVENRFQTRIGTLYSDNGGEFVVLRDYLSQHGISHFTSPPHTPEHNGLSERKHRHIV 612
Query: 221 EL 226
E+
Sbjct: 613 EM 614
Score = 74.3 bits (181), Expect(2) = 9e-24
Identities = 50/140 (35%), Positives = 69/140 (49%), Gaps = 2/140 (1%)
Frame = +2
Query: 791 ITTPESLTSYCTFSSTLHTTRRVPEHLIFAKEPAPRATHPMTTRSINGIFKPKQLH-LAT 967
I+ P S +S T + L P +I AP TH M TR+ +GI KP Q + AT
Sbjct: 873 ISEPNSPSSSSTSTPPLPPVLPAPP-IIQVNAQAPVNTHSMATRAKDGIRKPNQKYSYAT 931
Query: 968 KFPTPAPIEPSCYTQALKIPEWKTTMS*EFTALMANGTWTLVPKQD-HFNIIGNKWVYRI 1144
A EP QA+K W+ M E A + N TW LVP I+G +W++
Sbjct: 932 SLA--ANSEPRTAIQAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTK 989
Query: 1145 KHNTDGTITWYKTHLVRRGF 1204
K N+DG++ YK LV +G+
Sbjct: 990 KFNSDGSLNRYKARLVAKGY 1009
Score = 64.3 bits (155), Expect(2) = 9e-24
Identities = 29/49 (59%), Positives = 39/49 (79%)
Frame = +1
Query: 1192 AKGFLQRPDIDYNDTFSHVIKPQTIKLVLCVALSRNWPLIQMDVNNVFL 1338
AKG+ QRP +DY +TFS VIK +I++VL VA+ R+WP+ Q+DVNN FL
Sbjct: 1006 AKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFL 1054
>dbj|BAM44532.1| polyprotein [Arabidopsis thaliana]
Length = 1421
Score = 144 bits (364), Expect(2) = 2e-53
Identities = 65/113 (57%), Positives = 78/113 (69%)
Frame = +1
Query: 232 SILHHASLPLTFWSYALQTAAYLINRMPTSVLRNMSPFDILFRHPPNYSKLHVFGCLCFP 411
++L HAS+P T+W YA A YLINR+PT +L+ SPF LF PPNY KL VFGC C+P
Sbjct: 636 TLLSHASVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYP 695
Query: 412 WLAPYTTNKLQSKSIPCVFLDYITTQSAYLCFDPSSGKTYTSRHVQFVEDSFP 570
WL PY +KL+ KS C F+ Y TQSAYLC +G+ YTSRHVQF E FP
Sbjct: 696 WLRPYNRHKLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFP 748
Score = 93.2 bits (230), Expect(2) = 2e-53
Identities = 42/62 (67%), Positives = 53/62 (85%), Gaps = 1/62 (1%)
Frame = +2
Query: 44 FKSIVENQFDYKIKTLYSDNGGEFIKLRPFLKKHGISHLTTPPYTPEY-GLSERKHHHLV 220
FKS+VEN+F +I TLYSDNGGEF+ LR +L +HGISH T+PP+TPE+ GLSERKH H+V
Sbjct: 572 FKSLVENRFQTRIGTLYSDNGGEFVVLRDYLSQHGISHFTSPPHTPEHNGLSERKHRHIV 631
Query: 221 EL 226
E+
Sbjct: 632 EM 633
Score = 74.3 bits (181), Expect(2) = 9e-24
Identities = 50/140 (35%), Positives = 69/140 (49%), Gaps = 2/140 (1%)
Frame = +2
Query: 791 ITTPESLTSYCTFSSTLHTTRRVPEHLIFAKEPAPRATHPMTTRSINGIFKPKQLH-LAT 967
I+ P S +S T + L P +I AP TH M TR+ +GI KP Q + AT
Sbjct: 892 ISEPNSPSSSSTSTPPLPPVLPAPP-IIQVNAQAPVNTHSMATRAKDGIRKPNQKYSYAT 950
Query: 968 KFPTPAPIEPSCYTQALKIPEWKTTMS*EFTALMANGTWTLVPKQD-HFNIIGNKWVYRI 1144
A EP QA+K W+ M E A + N TW LVP I+G +W++
Sbjct: 951 SLA--ANSEPRTAIQAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTK 1008
Query: 1145 KHNTDGTITWYKTHLVRRGF 1204
K N+DG++ YK LV +G+
Sbjct: 1009 KFNSDGSLNRYKARLVAKGY 1028
Score = 64.3 bits (155), Expect(2) = 9e-24
Identities = 29/49 (59%), Positives = 39/49 (79%)
Frame = +1
Query: 1192 AKGFLQRPDIDYNDTFSHVIKPQTIKLVLCVALSRNWPLIQMDVNNVFL 1338
AKG+ QRP +DY +TFS VIK +I++VL VA+ R+WP+ Q+DVNN FL
Sbjct: 1025 AKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFL 1073
>dbj|BAM44530.1| polyprotein [Arabidopsis thaliana]
Length = 1421
Score = 144 bits (364), Expect(2) = 2e-53
Identities = 65/113 (57%), Positives = 78/113 (69%)
Frame = +1
Query: 232 SILHHASLPLTFWSYALQTAAYLINRMPTSVLRNMSPFDILFRHPPNYSKLHVFGCLCFP 411
++L HAS+P T+W YA A YLINR+PT +L+ SPF LF PPNY KL VFGC C+P
Sbjct: 636 TLLSHASVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYP 695
Query: 412 WLAPYTTNKLQSKSIPCVFLDYITTQSAYLCFDPSSGKTYTSRHVQFVEDSFP 570
WL PY +KL+ KS C F+ Y TQSAYLC +G+ YTSRHVQF E FP
Sbjct: 696 WLRPYNRHKLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFP 748
Score = 93.2 bits (230), Expect(2) = 2e-53
Identities = 42/62 (67%), Positives = 53/62 (85%), Gaps = 1/62 (1%)
Frame = +2
Query: 44 FKSIVENQFDYKIKTLYSDNGGEFIKLRPFLKKHGISHLTTPPYTPEY-GLSERKHHHLV 220
FKS+VEN+F +I TLYSDNGGEF+ LR +L +HGISH T+PP+TPE+ GLSERKH H+V
Sbjct: 572 FKSLVENRFQTRIGTLYSDNGGEFVVLRDYLSQHGISHFTSPPHTPEHNGLSERKHRHIV 631
Query: 221 EL 226
E+
Sbjct: 632 EM 633
Score = 74.3 bits (181), Expect(2) = 9e-24
Identities = 50/140 (35%), Positives = 69/140 (49%), Gaps = 2/140 (1%)
Frame = +2
Query: 791 ITTPESLTSYCTFSSTLHTTRRVPEHLIFAKEPAPRATHPMTTRSINGIFKPKQLH-LAT 967
I+ P S +S T + L P +I AP TH M TR+ +GI KP Q + AT
Sbjct: 892 ISEPNSPSSSSTSTPPLPPVLPAPP-IIQVNAQAPVNTHSMATRAKDGIRKPNQKYSYAT 950
Query: 968 KFPTPAPIEPSCYTQALKIPEWKTTMS*EFTALMANGTWTLVPKQD-HFNIIGNKWVYRI 1144
A EP QA+K W+ M E A + N TW LVP I+G +W++
Sbjct: 951 SLA--ANSEPRTAIQAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTK 1008
Query: 1145 KHNTDGTITWYKTHLVRRGF 1204
K N+DG++ YK LV +G+
Sbjct: 1009 KFNSDGSLNRYKARLVAKGY 1028
Score = 64.3 bits (155), Expect(2) = 9e-24
Identities = 29/49 (59%), Positives = 39/49 (79%)
Frame = +1
Query: 1192 AKGFLQRPDIDYNDTFSHVIKPQTIKLVLCVALSRNWPLIQMDVNNVFL 1338
AKG+ QRP +DY +TFS VIK +I++VL VA+ R+WP+ Q+DVNN FL
Sbjct: 1025 AKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFL 1073
>dbj|BAA78424.1| polyprotein [Arabidopsis thaliana] gi|404433798|dbj|BAM44533.1|
polyprotein [Arabidopsis thaliana]
Length = 1330
Score = 144 bits (364), Expect(2) = 2e-53
Identities = 65/113 (57%), Positives = 78/113 (69%)
Frame = +1
Query: 232 SILHHASLPLTFWSYALQTAAYLINRMPTSVLRNMSPFDILFRHPPNYSKLHVFGCLCFP 411
++L HAS+P T+W YA A YLINR+PT +L+ SPF LF PPNY KL VFGC C+P
Sbjct: 491 TLLSHASVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYP 550
Query: 412 WLAPYTTNKLQSKSIPCVFLDYITTQSAYLCFDPSSGKTYTSRHVQFVEDSFP 570
WL PY +KL+ KS C F+ Y TQSAYLC +G+ YTSRHVQF E FP
Sbjct: 551 WLRPYNRHKLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFP 603
Score = 93.2 bits (230), Expect(2) = 2e-53
Identities = 42/62 (67%), Positives = 53/62 (85%), Gaps = 1/62 (1%)
Frame = +2
Query: 44 FKSIVENQFDYKIKTLYSDNGGEFIKLRPFLKKHGISHLTTPPYTPEY-GLSERKHHHLV 220
FKS+VEN+F +I TLYSDNGGEF+ LR +L +HGISH T+PP+TPE+ GLSERKH H+V
Sbjct: 427 FKSLVENRFQTRIGTLYSDNGGEFVVLRDYLSQHGISHFTSPPHTPEHNGLSERKHRHIV 486
Query: 221 EL 226
E+
Sbjct: 487 EM 488
Score = 74.3 bits (181), Expect(2) = 9e-24
Identities = 50/140 (35%), Positives = 69/140 (49%), Gaps = 2/140 (1%)
Frame = +2
Query: 791 ITTPESLTSYCTFSSTLHTTRRVPEHLIFAKEPAPRATHPMTTRSINGIFKPKQLH-LAT 967
I+ P S +S T + L P +I AP TH M TR+ +GI KP Q + AT
Sbjct: 747 ISEPNSPSSSSTSTPPLPPVLPAPP-IIQVNAQAPVNTHSMATRAKDGIRKPNQKYSYAT 805
Query: 968 KFPTPAPIEPSCYTQALKIPEWKTTMS*EFTALMANGTWTLVPKQD-HFNIIGNKWVYRI 1144
A EP QA+K W+ M E A + N TW LVP I+G +W++
Sbjct: 806 SLA--ANSEPRTAIQAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTK 863
Query: 1145 KHNTDGTITWYKTHLVRRGF 1204
K N+DG++ YK LV +G+
Sbjct: 864 KFNSDGSLNRYKARLVAKGY 883
Score = 64.3 bits (155), Expect(2) = 9e-24
Identities = 29/49 (59%), Positives = 39/49 (79%)
Frame = +1
Query: 1192 AKGFLQRPDIDYNDTFSHVIKPQTIKLVLCVALSRNWPLIQMDVNNVFL 1338
AKG+ QRP +DY +TFS VIK +I++VL VA+ R+WP+ Q+DVNN FL
Sbjct: 880 AKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFL 928
>dbj|BAA78427.1| polyprotein [Arabidopsis thaliana]
Length = 1421
Score = 144 bits (363), Expect(2) = 3e-53
Identities = 65/113 (57%), Positives = 78/113 (69%)
Frame = +1
Query: 232 SILHHASLPLTFWSYALQTAAYLINRMPTSVLRNMSPFDILFRHPPNYSKLHVFGCLCFP 411
++L HAS+P T+W YA A YLINR+PT +L+ SPF LF PPNY KL VFGC C+P
Sbjct: 636 TLLSHASVPKTYWLYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYP 695
Query: 412 WLAPYTTNKLQSKSIPCVFLDYITTQSAYLCFDPSSGKTYTSRHVQFVEDSFP 570
WL PY +KL+ KS C F+ Y TQSAYLC +G+ YTSRHVQF E FP
Sbjct: 696 WLRPYNRHKLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFP 748
Score = 93.2 bits (230), Expect(2) = 3e-53
Identities = 42/62 (67%), Positives = 53/62 (85%), Gaps = 1/62 (1%)
Frame = +2
Query: 44 FKSIVENQFDYKIKTLYSDNGGEFIKLRPFLKKHGISHLTTPPYTPEY-GLSERKHHHLV 220
FKS+VEN+F +I TLYSDNGGEF+ LR +L +HGISH T+PP+TPE+ GLSERKH H+V
Sbjct: 572 FKSLVENRFQTRIGTLYSDNGGEFVVLRDYLSQHGISHFTSPPHTPEHNGLSERKHRHIV 631
Query: 221 EL 226
E+
Sbjct: 632 EM 633
Score = 74.3 bits (181), Expect(2) = 9e-24
Identities = 50/140 (35%), Positives = 69/140 (49%), Gaps = 2/140 (1%)
Frame = +2
Query: 791 ITTPESLTSYCTFSSTLHTTRRVPEHLIFAKEPAPRATHPMTTRSINGIFKPKQLH-LAT 967
I+ P S +S T + L P +I AP TH M TR+ +GI KP Q + AT
Sbjct: 892 ISEPNSPSSSSTSTPPLPPVLPAPP-IIQVNAQAPVNTHSMATRAKDGIRKPNQKYSYAT 950
Query: 968 KFPTPAPIEPSCYTQALKIPEWKTTMS*EFTALMANGTWTLVPKQD-HFNIIGNKWVYRI 1144
A EP QA+K W+ M E A + N TW LVP I+G +W++
Sbjct: 951 SLA--ANSEPRTAIQAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTK 1008
Query: 1145 KHNTDGTITWYKTHLVRRGF 1204
K N+DG++ YK LV +G+
Sbjct: 1009 KFNSDGSLNRYKARLVAKGY 1028
Score = 64.3 bits (155), Expect(2) = 9e-24
Identities = 29/49 (59%), Positives = 39/49 (79%)
Frame = +1
Query: 1192 AKGFLQRPDIDYNDTFSHVIKPQTIKLVLCVALSRNWPLIQMDVNNVFL 1338
AKG+ QRP +DY +TFS VIK +I++VL VA+ R+WP+ Q+DVNN FL
Sbjct: 1025 AKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFL 1073
>dbj|BAM44531.1| polyprotein [Arabidopsis thaliana]
Length = 1421
Score = 144 bits (363), Expect(2) = 3e-53
Identities = 65/113 (57%), Positives = 78/113 (69%)
Frame = +1
Query: 232 SILHHASLPLTFWSYALQTAAYLINRMPTSVLRNMSPFDILFRHPPNYSKLHVFGCLCFP 411
++L HAS+P T+W YA A YLINR+PT +L+ SPF LF PPNY KL VFGC C+P
Sbjct: 636 TLLSHASVPKTYWLYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYP 695
Query: 412 WLAPYTTNKLQSKSIPCVFLDYITTQSAYLCFDPSSGKTYTSRHVQFVEDSFP 570
WL PY +KL+ KS C F+ Y TQSAYLC +G+ YTSRHVQF E FP
Sbjct: 696 WLRPYNRHKLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFP 748
Score = 93.2 bits (230), Expect(2) = 3e-53
Identities = 42/62 (67%), Positives = 53/62 (85%), Gaps = 1/62 (1%)
Frame = +2
Query: 44 FKSIVENQFDYKIKTLYSDNGGEFIKLRPFLKKHGISHLTTPPYTPEY-GLSERKHHHLV 220
FKS+VEN+F +I TLYSDNGGEF+ LR +L +HGISH T+PP+TPE+ GLSERKH H+V
Sbjct: 572 FKSLVENRFQTRIGTLYSDNGGEFVVLRDYLSQHGISHFTSPPHTPEHNGLSERKHRHIV 631
Query: 221 EL 226
E+
Sbjct: 632 EM 633
Score = 74.3 bits (181), Expect(2) = 9e-24
Identities = 50/140 (35%), Positives = 69/140 (49%), Gaps = 2/140 (1%)
Frame = +2
Query: 791 ITTPESLTSYCTFSSTLHTTRRVPEHLIFAKEPAPRATHPMTTRSINGIFKPKQLH-LAT 967
I+ P S +S T + L P +I AP TH M TR+ +GI KP Q + AT
Sbjct: 892 ISEPNSPSSSSTSTPPLPPVLPAPP-IIQVNAQAPVNTHSMATRAKDGIRKPNQKYSYAT 950
Query: 968 KFPTPAPIEPSCYTQALKIPEWKTTMS*EFTALMANGTWTLVPKQD-HFNIIGNKWVYRI 1144
A EP QA+K W+ M E A + N TW LVP I+G +W++
Sbjct: 951 SLA--ANSEPRTAIQAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTK 1008
Query: 1145 KHNTDGTITWYKTHLVRRGF 1204
K N+DG++ YK LV +G+
Sbjct: 1009 KFNSDGSLNRYKARLVAKGY 1028
Score = 64.3 bits (155), Expect(2) = 9e-24
Identities = 29/49 (59%), Positives = 39/49 (79%)
Frame = +1
Query: 1192 AKGFLQRPDIDYNDTFSHVIKPQTIKLVLCVALSRNWPLIQMDVNNVFL 1338
AKG+ QRP +DY +TFS VIK +I++VL VA+ R+WP+ Q+DVNN FL
Sbjct: 1025 AKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFL 1073
>gb|AAD14478.1| Strong similarity to gb|AF039376 Evelknievel retrotransposon
polyprotein from Arabidopsis arenosa [Arabidopsis
thaliana]
Length = 1194
Score = 149 bits (377), Expect(2) = 4e-53
Identities = 67/116 (57%), Positives = 85/116 (73%)
Frame = +1
Query: 223 TTCSILHHASLPLTFWSYALQTAAYLINRMPTSVLRNMSPFDILFRHPPNYSKLHVFGCL 402
T ++L AS+P ++WSYA A YLINRM + V+ +SP+ LF PNY KL VFGCL
Sbjct: 592 TGLTLLGQASMPKSYWSYAFTIAIYLINRMSSDVIGGISPYKRLFGQAPNYLKLRVFGCL 651
Query: 403 CFPWLAPYTTNKLQSKSIPCVFLDYITTQSAYLCFDPSSGKTYTSRHVQFVEDSFP 570
CFPWL PYTT+KL + PCVFL Y TQSAYLC + ++G+ YTSRHVQFVE+++P
Sbjct: 652 CFPWLRPYTTHKLDDRPAPCVFLGYSQTQSAYLCLNRTTGRVYTSRHVQFVENTYP 707
Score = 87.0 bits (214), Expect(2) = 4e-53
Identities = 41/61 (67%), Positives = 50/61 (81%), Gaps = 1/61 (1%)
Frame = +2
Query: 44 FKSIVENQFDYKIKTLYSDNGGEFIKLRPFLKKHGISHLTTPPYTPEY-GLSERKHHHLV 220
FK++V N+F KI LYSDNGGEFI LR FL +GI+HLTTPP+TPE+ G+SERKH H+V
Sbjct: 531 FKALVANKFQRKIIHLYSDNGGEFIALRSFLSSNGITHLTTPPHTPEHNGISERKHRHIV 590
Query: 221 E 223
E
Sbjct: 591 E 591
Score = 85.1 bits (209), Expect(2) = 1e-25
Identities = 44/107 (41%), Positives = 63/107 (58%), Gaps = 1/107 (0%)
Frame = +2
Query: 887 PAPRATHPMTTRSINGIFKP-KQLHLATKFPTPAPIEPSCYTQALKIPEWKTTMS*EFTA 1063
P P+ H M TR+ N I KP K+L LA + I P+ +AL+ P W+ MS EF A
Sbjct: 863 PPPQNQHSMRTRAKNNITKPIKKLTLAATPKGKSKI-PTTVAEALRDPNWRNAMSEEFNA 921
Query: 1064 LMANGTWTLVPKQDHFNIIGNKWVYRIKHNTDGTITWYKTHLVRRGF 1204
+ N T+ LVP + H N +G +W++ IK+N DG+I YK + +GF
Sbjct: 922 GLRNSTYDLVPPKPHQNFVGTRWIFTIKYNPDGSINRYKARFLAKGF 968
Score = 60.1 bits (144), Expect(2) = 1e-25
Identities = 27/51 (52%), Positives = 39/51 (76%)
Frame = +1
Query: 1186 FSAKGFLQRPDIDYNDTFSHVIKPQTIKLVLCVALSRNWPLIQMDVNNVFL 1338
F AKGF Q+ +DY++TFS VIK T++ VL +A+SR+W + Q+D+NN FL
Sbjct: 963 FLAKGFHQQHGLDYSNTFSPVIKSTTVQTVLDIAVSRSWDIRQLDINNAFL 1013