BLASTX nr result
ID: Rehmannia22_contig00032078
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00032078
(464 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAX19931.1| viral replicase [Nandina mosaic virus] 248 8e-64
gb|AGW45389.1| RNA-dependent RNA polymerase, partial [Plantago a... 220 2e-55
dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica ... 219 3e-55
dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica ... 218 7e-55
dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica ... 218 9e-55
dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica ... 218 9e-55
dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica ... 218 9e-55
dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica ... 218 9e-55
dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica ... 218 9e-55
ref|NP_620836.1| replicase [Plantago asiatica mosaic virus] gi|1... 201 1e-49
ref|NP_702988.1| RNA-dependent RNA polymerase [Tulip virus X] gi... 150 2e-34
gb|AHB59866.1| replicase [Narcissus mosaic virus] 94 1e-17
ref|YP_001960940.1| RNA-dependent RNA polymerase [Lettuce virus ... 92 5e-17
gb|AAP51012.1| 186K protein [Narcissus mosaic virus strain New Z... 92 7e-17
gb|AGO03686.1| RNA dependent RNA polymerase, partial [Actinidia ... 92 9e-17
ref|YP_001715612.1| RNA dependent RNA polymerase [Asparagus viru... 91 2e-16
ref|NP_040778.1| replicase [Narcissus mosaic virus] gi|139136|sp... 91 2e-16
ref|YP_319827.1| replicase protein [Alstroemeria virus x] gi|742... 90 4e-16
ref|YP_002647027.1| replicase [Allium virus X] gi|224579235|gb|A... 88 1e-15
gb|AAS87218.1| RNA-dependent RNA polymerase [Cymbidium mosaic vi... 86 4e-15
>gb|AAX19931.1| viral replicase [Nandina mosaic virus]
Length = 1368
Score = 248 bits (632), Expect = 8e-64
Identities = 120/154 (77%), Positives = 132/154 (85%)
Frame = +3
Query: 3 RQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSDIQRVL 182
RQLISTKELQHYQPSEITLLVNYFEF ASLDSHTCFEDVLSGNL+QRLLRPLR+D+QR+L
Sbjct: 319 RQLISTKELQHYQPSEITLLVNYFEFAASLDSHTCFEDVLSGNLLQRLLRPLRADMQRIL 378
Query: 183 QFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPDDADTMRA 362
FFRGRPSFVKLIKALDWQPITLEFPVR VNTRLRGPPGF +PFT+P PVNPDDA+T +
Sbjct: 379 HFFRGRPSFVKLIKALDWQPITLEFPVRRVNTRLRGPPGFLSPFTRPQPVNPDDAETTES 438
Query: 363 FREFSYTSETSTPTTIADSLEGSAENLASHTSLK 464
FREF S T+ + LE S E+ +HTSLK
Sbjct: 439 FREFIQPLNPSPTATVTEMLENSTESDVTHTSLK 472
>gb|AGW45389.1| RNA-dependent RNA polymerase, partial [Plantago asiatica mosaic
virus]
Length = 669
Score = 220 bits (560), Expect = 2e-55
Identities = 108/154 (70%), Positives = 123/154 (79%)
Frame = +3
Query: 3 RQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSDIQRVL 182
RQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSGNL+QR+LRPL S ++L
Sbjct: 319 RQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSGNLLQRILRPLTSGATQIL 378
Query: 183 QFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPDDADTMRA 362
FFRGRPSFVKLI+ALDWQPITLEFPVR VNT LRGPPGF +PFT+P PVNPDDA+T +
Sbjct: 379 NFFRGRPSFVKLIQALDWQPITLEFPVRKVNTLLRGPPGFDSPFTRPQPVNPDDAETTHS 438
Query: 363 FREFSYTSETSTPTTIADSLEGSAENLASHTSLK 464
F+ F + + +LE AE H SL+
Sbjct: 439 FQAFCQAA-----AAVETTLEQQAETPDEHQSLR 467
>dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 219 bits (558), Expect = 3e-55
Identities = 109/153 (71%), Positives = 124/153 (81%)
Frame = +3
Query: 3 RQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSDIQRVL 182
RQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSGNL+QR+LRPL+S I ++L
Sbjct: 319 RQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSGNLLQRMLRPLKSGITQLL 378
Query: 183 QFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPDDADTMRA 362
FFRGRPSFVKLIKALDWQPITLEFPVR VNT LRG PGF +PF +P PVNPDDA+T ++
Sbjct: 379 NFFRGRPSFVKLIKALDWQPITLEFPVRKVNTHLRGAPGFDSPFARPQPVNPDDAETTQS 438
Query: 363 FREFSYTSETSTPTTIADSLEGSAENLASHTSL 461
F+ F + T+ +LE AE H SL
Sbjct: 439 FQAFCQATITAEA-----ALEQQAETPDEHQSL 466
>dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 218 bits (555), Expect = 7e-55
Identities = 107/153 (69%), Positives = 123/153 (80%)
Frame = +3
Query: 3 RQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSDIQRVL 182
RQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSGNL+QR+LRPLRS + ++L
Sbjct: 319 RQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSGNLLQRMLRPLRSGLTQLL 378
Query: 183 QFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPDDADTMRA 362
FFRGRPSFVKLIKALDWQPITLEFPVR VNT LRG PGF +PF +P PVNPDDA+T ++
Sbjct: 379 DFFRGRPSFVKLIKALDWQPITLEFPVRKVNTHLRGAPGFDSPFARPQPVNPDDAETTQS 438
Query: 363 FREFSYTSETSTPTTIADSLEGSAENLASHTSL 461
F+ F + T+ +L +E H SL
Sbjct: 439 FQAFCQAT-----ATVEXTLAQQSETPDEHQSL 466
>dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 218 bits (554), Expect = 9e-55
Identities = 107/153 (69%), Positives = 123/153 (80%)
Frame = +3
Query: 3 RQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSDIQRVL 182
RQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSGNL+QR+LRPLRS + ++L
Sbjct: 319 RQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSGNLLQRMLRPLRSGLTQLL 378
Query: 183 QFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPDDADTMRA 362
FFRGRPSFVKLIKALDWQPITLEFPVR VNT LRG PGF +PF +P PVNPDDA+T ++
Sbjct: 379 DFFRGRPSFVKLIKALDWQPITLEFPVRKVNTHLRGAPGFDSPFARPQPVNPDDAETTQS 438
Query: 363 FREFSYTSETSTPTTIADSLEGSAENLASHTSL 461
F+ F + T+ +L +E H SL
Sbjct: 439 FQAFCQAT-----ATVEATLAQQSETPDEHQSL 466
>dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 218 bits (554), Expect = 9e-55
Identities = 107/153 (69%), Positives = 123/153 (80%)
Frame = +3
Query: 3 RQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSDIQRVL 182
RQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSGNL+QR+LRPLRS + ++L
Sbjct: 319 RQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSGNLLQRMLRPLRSGLTQLL 378
Query: 183 QFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPDDADTMRA 362
FFRGRPSFVKLIKALDWQPITLEFPVR VNT LRG PGF +PF +P PVNPDDA+T ++
Sbjct: 379 DFFRGRPSFVKLIKALDWQPITLEFPVRKVNTHLRGAPGFDSPFARPQPVNPDDAETTQS 438
Query: 363 FREFSYTSETSTPTTIADSLEGSAENLASHTSL 461
F+ F + T+ +L +E H SL
Sbjct: 439 FQAFCQAT-----ATVEATLAQQSETPDEHQSL 466
>dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 218 bits (554), Expect = 9e-55
Identities = 107/153 (69%), Positives = 123/153 (80%)
Frame = +3
Query: 3 RQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSDIQRVL 182
RQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSGNL+QR+LRPLRS + ++L
Sbjct: 319 RQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSGNLLQRMLRPLRSGLTQLL 378
Query: 183 QFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPDDADTMRA 362
FFRGRPSFVKLIKALDWQPITLEFPVR VNT LRG PGF +PF +P PVNPDDA+T ++
Sbjct: 379 DFFRGRPSFVKLIKALDWQPITLEFPVRKVNTHLRGAPGFDSPFARPQPVNPDDAETTQS 438
Query: 363 FREFSYTSETSTPTTIADSLEGSAENLASHTSL 461
F+ F + T+ +L +E H SL
Sbjct: 439 FQAFCQAT-----ATVEATLAQQSETPDEHQSL 466
>dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 218 bits (554), Expect = 9e-55
Identities = 107/153 (69%), Positives = 123/153 (80%)
Frame = +3
Query: 3 RQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSDIQRVL 182
RQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSGNL+QR+LRPLRS + ++L
Sbjct: 319 RQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSGNLLQRMLRPLRSGLTQLL 378
Query: 183 QFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPDDADTMRA 362
FFRGRPSFVKLIKALDWQPITLEFPVR VNT LRG PGF +PF +P PVNPDDA+T ++
Sbjct: 379 DFFRGRPSFVKLIKALDWQPITLEFPVRKVNTHLRGAPGFDSPFARPQPVNPDDAETTQS 438
Query: 363 FREFSYTSETSTPTTIADSLEGSAENLASHTSL 461
F+ F + T+ +L +E H SL
Sbjct: 439 FQAFCQAT-----ATVEATLAQQSETPDEHQSL 466
>dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 218 bits (554), Expect = 9e-55
Identities = 107/153 (69%), Positives = 123/153 (80%)
Frame = +3
Query: 3 RQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSDIQRVL 182
RQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSGNL+QR+LRPLRS + ++L
Sbjct: 319 RQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSGNLLQRMLRPLRSGLTQLL 378
Query: 183 QFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPDDADTMRA 362
FFRGRPSFVKLIKALDWQPITLEFPVR VNT LRG PGF +PF +P PVNPDDA+T ++
Sbjct: 379 DFFRGRPSFVKLIKALDWQPITLEFPVRKVNTHLRGAPGFDSPFARPQPVNPDDAETTQS 438
Query: 363 FREFSYTSETSTPTTIADSLEGSAENLASHTSL 461
F+ F + T+ +L +E H SL
Sbjct: 439 FQAFCQAT-----ATVEATLAQQSETPDEHQSL 466
>ref|NP_620836.1| replicase [Plantago asiatica mosaic virus]
gi|1173174|sp|Q07518.1|RDRP_P1AMV RecName: Full=RNA
replication protein; AltName: Full=156 kDa protein;
AltName: Full=ORF1 protein; Includes: RecName:
Full=RNA-directed RNA polymerase; Includes: RecName:
Full=Helicase gi|311645|emb|CAA79761.1| 156K-protein
[Plantago asiatica mosaic virus]
Length = 1385
Score = 201 bits (510), Expect = 1e-49
Identities = 102/154 (66%), Positives = 116/154 (75%)
Frame = +3
Query: 3 RQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSDIQRVL 182
+QLISTKELQHYQPSEITLLVNYFEFTA+LDSHTCFEDV L + I R+L
Sbjct: 318 QQLISTKELQHYQPSEITLLVNYFEFTATLDSHTCFEDV-PPKLAPKTTPAPPLGISRIL 376
Query: 183 QFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPDDADTMRA 362
QFFRGRPSFVKLIKALDWQPITLEFPVR V T +RGPPGF NPFT+P PVNP+DAD
Sbjct: 377 QFFRGRPSFVKLIKALDWQPITLEFPVRDVRTTVRGPPGFKNPFTQPQPVNPEDADISSR 436
Query: 363 FREFSYTSETSTPTTIADSLEGSAENLASHTSLK 464
F++FS + ++ T+ LE SAE+ HT LK
Sbjct: 437 FQDFSRATNSTPKPTVEAVLEASAESPDHHTQLK 470
>ref|NP_702988.1| RNA-dependent RNA polymerase [Tulip virus X]
gi|23491554|dbj|BAC16785.1| RNA-dependent RNA polymerase
[Tulip virus X]
Length = 1361
Score = 150 bits (378), Expect = 2e-34
Identities = 74/120 (61%), Positives = 88/120 (73%)
Frame = +3
Query: 3 RQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSDIQRVL 182
RQLISTKELQH+QP E TLLVNYF+F A+LDS TC ED+LSG+L+ RLLRP R + Q ++
Sbjct: 318 RQLISTKELQHFQPDEATLLVNYFDFVANLDSATCHEDILSGSLLTRLLRPARVNWQALV 377
Query: 183 QFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPDDADTMRA 362
+FF+G P KLIKAL WQP+ LEF V TV R PPGF +P +P PVN DA T A
Sbjct: 378 RFFKGSPDHTKLIKALQWQPVLLEFKVSTVLVHKRTPPGFRHPLCRPLPVNEVDALTTAA 437
>gb|AHB59866.1| replicase [Narcissus mosaic virus]
Length = 1630
Score = 94.4 bits (233), Expect = 1e-17
Identities = 46/100 (46%), Positives = 67/100 (67%), Gaps = 5/100 (5%)
Frame = +3
Query: 3 RQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSDIQRVL 182
RQ+I T EL+ Y P EI L NYF F ++LDS TC+ED+LS N+ RL RPLR+ +++ +
Sbjct: 323 RQIIPTSELELYDPDEIVHLANYFSFVSNLDSITCYEDLLSSNIWTRLTRPLRTAVRKFV 382
Query: 183 QFFRGRPSFVKLIKALDWQPIT-----LEFPVRTVNTRLR 287
+FF+G+ F KL+ AL WQP + ++F V+ R+R
Sbjct: 383 EFFKGKQDFDKLLIALKWQPFSYSLEPVDFTAYFVSRRVR 422
>ref|YP_001960940.1| RNA-dependent RNA polymerase [Lettuce virus X]
gi|189458580|emb|CAN88808.1| RNA-dependent RNA
polymerase [Lettuce virus X]
Length = 1708
Score = 92.4 bits (228), Expect = 5e-17
Identities = 42/93 (45%), Positives = 62/93 (66%)
Frame = +3
Query: 6 QLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSDIQRVLQ 185
Q++ T EL+ Y+P E+ L NYF F ++L S+TC+ED+LSG LI+RL RP+R+ + R ++
Sbjct: 324 QVLPTNELELYEPDELVHLANYFFFLSNLKSYTCYEDLLSGGLIKRLTRPVRTAVTRFIE 383
Query: 186 FFRGRPSFVKLIKALDWQPITLEFPVRTVNTRL 284
FF GR F KL+ AL W+P T T++
Sbjct: 384 FFAGRNDFNKLMDALKWEPFTYTLEPAVYKTKV 416
>gb|AAP51012.1| 186K protein [Narcissus mosaic virus strain New Zealand]
Length = 1643
Score = 92.0 bits (227), Expect = 7e-17
Identities = 45/100 (45%), Positives = 67/100 (67%), Gaps = 5/100 (5%)
Frame = +3
Query: 3 RQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSDIQRVL 182
RQ+I T EL+ Y P EI L NYF F ++LDS TC+ED+LS ++ RL RPLR+ +++ +
Sbjct: 323 RQIIPTSELELYDPDEIVHLANYFFFVSNLDSTTCYEDLLSSDIWMRLTRPLRTAVRKFV 382
Query: 183 QFFRGRPSFVKLIKALDWQPIT-----LEFPVRTVNTRLR 287
+FF+G+ F KL+ AL WQP + ++F V+ R+R
Sbjct: 383 EFFKGKQDFDKLLIALKWQPFSYSLEPVDFTAYFVSRRVR 422
>gb|AGO03686.1| RNA dependent RNA polymerase, partial [Actinidia virus X]
Length = 1607
Score = 91.7 bits (226), Expect = 9e-17
Identities = 42/82 (51%), Positives = 61/82 (74%)
Frame = +3
Query: 3 RQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSDIQRVL 182
RQLI T+EL+ Y+P EI L NYF F A LDS TCFED+LS N+ +RL P+R++ ++++
Sbjct: 328 RQLIPTQELELYEPDEIVHLANYFYFMAHLDSITCFEDMLSNNVWRRLTLPIRTNFRQLV 387
Query: 183 QFFRGRPSFVKLIKALDWQPIT 248
+FF+G+ F KL++AL W+ T
Sbjct: 388 EFFKGKSDFDKLLQALKWETFT 409
>ref|YP_001715612.1| RNA dependent RNA polymerase [Asparagus virus 3]
gi|169219513|dbj|BAG12158.1| RNA dependent RNA
polymerase [Asparagus virus 3]
Length = 1614
Score = 90.9 bits (224), Expect = 2e-16
Identities = 46/93 (49%), Positives = 63/93 (67%), Gaps = 5/93 (5%)
Frame = +3
Query: 3 RQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSDIQRVL 182
RQ+IST+EL+ Y+P EI L NYF F A LDS TC+ED+L +L +RL P+R+ I + L
Sbjct: 323 RQIISTQELELYEPDEIVHLCNYFNFVAHLDSITCYEDLLGNSLWRRLTIPIRTTITKAL 382
Query: 183 QFFRGRPSFVKLIKALDWQPIT-----LEFPVR 266
FFRG+ SF KL+ AL W+ + ++F VR
Sbjct: 383 DFFRGQQSFSKLLGALKWESFSYSLEPIDFTVR 415
>ref|NP_040778.1| replicase [Narcissus mosaic virus] gi|139136|sp|P15095.1|RDRP_NMV
RecName: Full=RNA replication protein; AltName: Full=186
kDa protein; AltName: Full=ORF1 protein; Includes:
RecName: Full=RNA-directed RNA polymerase; Includes:
RecName: Full=Helicase gi|222108|dbj|BAA02891.1| 186K
protein [Narcissus mosaic virus]
Length = 1643
Score = 90.5 bits (223), Expect = 2e-16
Identities = 45/100 (45%), Positives = 66/100 (66%), Gaps = 5/100 (5%)
Frame = +3
Query: 3 RQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSDIQRVL 182
RQ+I T EL+ Y P EI L NYF F +SLDS TC+ED+LS ++ RL RPLR+ +++ +
Sbjct: 323 RQIIPTSELELYDPDEIVHLANYFFFVSSLDSITCYEDLLSSDIWMRLTRPLRTAVRKFV 382
Query: 183 QFFRGRPSFVKLIKALDWQPIT-----LEFPVRTVNTRLR 287
+ F+G+ F KL+ AL WQP + ++F V+ R+R
Sbjct: 383 ELFKGKQDFDKLLIALKWQPFSYSLEPVDFTAYFVSRRVR 422
>ref|YP_319827.1| replicase protein [Alstroemeria virus x]
gi|74267429|dbj|BAE44211.1| replicase protein
[Alstroemeria virus x]
Length = 1646
Score = 89.7 bits (221), Expect = 4e-16
Identities = 40/94 (42%), Positives = 65/94 (69%)
Frame = +3
Query: 3 RQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSDIQRVL 182
RQ++ T+EL+ Y+P+E+ +VNYF F A+L S TC+ED+LSG+L++R+ P+R+ I + +
Sbjct: 323 RQVLRTEELELYEPAEVAHIVNYFYFIANLHSITCYEDLLSGSLLKRMTVPIRTAITKFV 382
Query: 183 QFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRL 284
+ FRG+ FVKL+ AL W T + T++
Sbjct: 383 EVFRGKNDFVKLLDALKWDNFTYSIKPEDMTTKM 416
>ref|YP_002647027.1| replicase [Allium virus X] gi|224579235|gb|ACN58194.1| replicase
[Allium virus X]
Length = 1701
Score = 87.8 bits (216), Expect = 1e-15
Identities = 43/91 (47%), Positives = 57/91 (62%)
Frame = +3
Query: 3 RQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSDIQRVL 182
RQLI T +LQ + SE+ +VNYF F A DS TCF D+LSG+L ++L +PL + +
Sbjct: 317 RQLIKTDQLQGFDASELVHIVNYFCFIAKQDSMTCFSDILSGSLFKKLFQPLAAFLAECK 376
Query: 183 QFFRGRPSFVKLIKALDWQPITLEFPVRTVN 275
F G P F KL+KAL WQ IT+ V +N
Sbjct: 377 HFIFGEPDFKKLLKALQWQDITMVVTVADIN 407
>gb|AAS87218.1| RNA-dependent RNA polymerase [Cymbidium mosaic virus]
Length = 1417
Score = 86.3 bits (212), Expect = 4e-15
Identities = 40/93 (43%), Positives = 59/93 (63%)
Frame = +3
Query: 3 RQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSDIQRVL 182
RQLI T EL + P E+T LVNY F + L S + ++D+LS N+ Q P+++ I+ ++
Sbjct: 322 RQLIPTSELDLFDPVEVTHLVNYLLFVSHLSSVSSYDDILSSNIFQHFTIPIKNKIRELV 381
Query: 183 QFFRGRPSFVKLIKALDWQPITLEFPVRTVNTR 281
Q F G F +L+KALDWQ + PV T++TR
Sbjct: 382 QLFTGADQFNQLLKALDWQTFSYSMPVETIHTR 414