BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00032038
         (476 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006490837.1| PREDICTED: uncharacterized protein LOC102624...   242   4e-62
gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]              229   2e-58
emb|CAN77900.1| hypothetical protein VITISV_037350 [Vitis vinifera]   227   1e-57
gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea bat...   220   1e-55
gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]     219   4e-55
gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group] gi|...   219   4e-55
ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japonica Group] g...   217   1e-54
gb|AAW28576.2| Gag-pol polyprotein, putative [Solanum demissum]       212   5e-53
gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum ...   212   5e-53
gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum ...   212   5e-53
ref|XP_006606762.1| PREDICTED: uncharacterized protein LOC102662...   209   4e-52
gb|AAU90169.1| putative polyprotein [Oryza sativa Japonica Group]     208   7e-52
gb|AAM94350.1| gag-pol polyprotein [Zea mays]                         206   2e-51
dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group]       205   4e-51
gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sa...   205   4e-51
gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare]                  205   4e-51
gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare]                  205   6e-51
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja...   204   1e-50
gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subc...   203   2e-50
gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum...   203   2e-50

>ref|XP_006490837.1| PREDICTED: uncharacterized protein LOC102624555 [Citrus sinensis]
          Length = 821

 Score =  242 bits (617), Expect = 4e-62
 Identities = 111/158 (70%), Positives = 131/158 (82%)
 Frame = +2

Query: 2   GVPRTIVSDRDTKFLSHFWRVLWSKLGTKLLFSTTCHPQTDGQTEVVNRTLSQLLRTLIQ 181
           GVPR+IVSDRD KFLSHFW+ LW KLGTKLLFSTTCHPQTDGQTEVVNRTLS LLR +IQ
Sbjct: 249 GVPRSIVSDRDAKFLSHFWKTLWGKLGTKLLFSTTCHPQTDGQTEVVNRTLSTLLRAIIQ 308

Query: 182 KNLKNWEDCLPFVEFAYNRSVHSATNFTPFEVVYGFNPLSPLDLVPIPVEEQASLDGXXX 361
           KNLK WE+CLP VEFAYNR+VHSAT F+PFE+VYGFNPL+PLDL+P+P++E+AS+DG   
Sbjct: 309 KNLKTWEECLPHVEFAYNRTVHSATKFSPFEIVYGFNPLTPLDLLPLPIDERASMDGKKK 368

Query: 362 XXXXXXXXXXXXLNIEKQTKRYVKQATKGRKQVIFEPG 475
                        +IEK+T++Y  QA KGRKQV+F+PG
Sbjct: 369 AEFVKQLHERTRQHIEKRTEQYATQANKGRKQVVFQPG 406


>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
          Length = 1887

 Score =  229 bits (585), Expect = 2e-58
 Identities = 107/158 (67%), Positives = 126/158 (79%)
 Frame = +2

Query: 2    GVPRTIVSDRDTKFLSHFWRVLWSKLGTKLLFSTTCHPQTDGQTEVVNRTLSQLLRTLIQ 181
            G+P+TIVSDRDTKFLS+FW+ LWSKLGTKLLFSTTCHPQTDGQTEVVNRTLS LLR LI+
Sbjct: 1514 GMPKTIVSDRDTKFLSYFWKTLWSKLGTKLLFSTTCHPQTDGQTEVVNRTLSTLLRALIK 1573

Query: 182  KNLKNWEDCLPFVEFAYNRSVHSATNFTPFEVVYGFNPLSPLDLVPIPVEEQASLDGXXX 361
            KNLK WEDCLP VEFAYN S+HSA+ F+PF++VYGFNP +PLDL+P+P+ E+ SLDG   
Sbjct: 1574 KNLKTWEDCLPHVEFAYNHSMHSASKFSPFQIVYGFNPTTPLDLMPLPLSERVSLDGKKK 1633

Query: 362  XXXXXXXXXXXXLNIEKQTKRYVKQATKGRKQVIFEPG 475
                         NIE++TK+Y K A K RK+VIF  G
Sbjct: 1634 AELVQQIHEQAKKNIEEKTKQYAKHANKSRKEVIFNEG 1671


>emb|CAN77900.1| hypothetical protein VITISV_037350 [Vitis vinifera]
          Length = 1173

 Score =  227 bits (579), Expect = 1e-57
 Identities = 109/158 (68%), Positives = 125/158 (79%)
 Frame = +2

Query: 2    GVPRTIVSDRDTKFLSHFWRVLWSKLGTKLLFSTTCHPQTDGQTEVVNRTLSQLLRTLIQ 181
            G+PR+IVSDRD KFLS FW+VLW KLGTKLLFSTTCHPQTDGQ EVVNRTLS LLRT+IQ
Sbjct: 915  GIPRSIVSDRDVKFLSCFWKVLWGKLGTKLLFSTTCHPQTDGQIEVVNRTLSTLLRTIIQ 974

Query: 182  KNLKNWEDCLPFVEFAYNRSVHSATNFTPFEVVYGFNPLSPLDLVPIPVEEQASLDGXXX 361
            KNLKNWEDCLPF EFAYNRSVHS T+F+PFE+VYGFNPL+PLDL+P+PV E  SLD    
Sbjct: 975  KNLKNWEDCLPFTEFAYNRSVHSTTSFSPFEIVYGFNPLTPLDLLPLPVNEMTSLD---- 1030

Query: 362  XXXXXXXXXXXXLNIEKQTKRYVKQATKGRKQVIFEPG 475
                           EK+ ++YV +A KGR+QV+FE G
Sbjct: 1031 ---------------EKKNEQYVTKANKGRRQVLFESG 1053


>gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea batatas]
          Length = 1358

 Score =  220 bits (561), Expect = 1e-55
 Identities = 99/158 (62%), Positives = 124/158 (78%)
 Frame = +2

Query: 2    GVPRTIVSDRDTKFLSHFWRVLWSKLGTKLLFSTTCHPQTDGQTEVVNRTLSQLLRTLIQ 181
            G+PRTIVSDRD KFLSHFWR+LW KLGTKLL+ST CHPQTDGQTEVVNRTL+QLLR +I+
Sbjct: 1046 GIPRTIVSDRDAKFLSHFWRILWGKLGTKLLYSTACHPQTDGQTEVVNRTLTQLLRVVIR 1105

Query: 182  KNLKNWEDCLPFVEFAYNRSVHSATNFTPFEVVYGFNPLSPLDLVPIPVEEQASLDGXXX 361
            KNLK+WE+ LP+VEFAYNR++HS TN +PFEV YGFNPL+PLDL+P+ V ++  +D    
Sbjct: 1106 KNLKSWEESLPYVEFAYNRAIHSTTNMSPFEVAYGFNPLTPLDLIPLHVNDKECVDAAKK 1165

Query: 362  XXXXXXXXXXXXLNIEKQTKRYVKQATKGRKQVIFEPG 475
                          IEK+ ++Y ++A KGRK +IF+PG
Sbjct: 1166 AQGIREFHSKVRAQIEKKNEQYAQKANKGRKAIIFKPG 1203


>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1713

 Score =  219 bits (557), Expect = 4e-55
 Identities = 102/158 (64%), Positives = 123/158 (77%)
 Frame = +2

Query: 2    GVPRTIVSDRDTKFLSHFWRVLWSKLGTKLLFSTTCHPQTDGQTEVVNRTLSQLLRTLIQ 181
            G+P+TIVSDRDTKFLS+FW+ LW+KLGT+LLFSTTCHPQTDGQTEVVNRTLS LLR LI+
Sbjct: 1326 GMPKTIVSDRDTKFLSYFWKTLWAKLGTRLLFSTTCHPQTDGQTEVVNRTLSMLLRALIK 1385

Query: 182  KNLKNWEDCLPFVEFAYNRSVHSATNFTPFEVVYGFNPLSPLDLVPIPVEEQASLDGXXX 361
            KNLK WE+CLP VEFAYNR+VHS TN  PFEVVYGF PLSP+DL+P+P++E++ ++    
Sbjct: 1386 KNLKEWEECLPHVEFAYNRAVHSTTNMCPFEVVYGFKPLSPIDLLPLPLQERSDMEASKR 1445

Query: 362  XXXXXXXXXXXXLNIEKQTKRYVKQATKGRKQVIFEPG 475
                          IEK++K Y   A K RK+V FEPG
Sbjct: 1446 ATYVKKIHEKTKEAIEKRSKYYAAWANKNRKKVTFEPG 1483


>gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group]
           gi|52353557|gb|AAU44123.1| putative polyprotein [Oryza
           sativa Japonica Group]
          Length = 681

 Score =  219 bits (557), Expect = 4e-55
 Identities = 102/158 (64%), Positives = 123/158 (77%)
 Frame = +2

Query: 2   GVPRTIVSDRDTKFLSHFWRVLWSKLGTKLLFSTTCHPQTDGQTEVVNRTLSQLLRTLIQ 181
           G+P+TIVSDRDTKFLS+FW+ LW+KLGT+LLFSTTCHPQTDGQTEVVNRTLS LLR LI+
Sbjct: 294 GMPKTIVSDRDTKFLSYFWKTLWAKLGTRLLFSTTCHPQTDGQTEVVNRTLSMLLRALIK 353

Query: 182 KNLKNWEDCLPFVEFAYNRSVHSATNFTPFEVVYGFNPLSPLDLVPIPVEEQASLDGXXX 361
           KNLK WE+CLP VEFAYNR+VHS TN  PFEVVYGF PLSP+DL+P+P++E++ ++    
Sbjct: 354 KNLKEWEECLPHVEFAYNRAVHSTTNMCPFEVVYGFKPLSPIDLLPLPLQERSDMEASKR 413

Query: 362 XXXXXXXXXXXXLNIEKQTKRYVKQATKGRKQVIFEPG 475
                         IEK++K Y   A K RK+V FEPG
Sbjct: 414 ATYVKKIHEKTKEAIEKRSKYYAAWANKNRKKVTFEPG 451


>ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japonica Group]
           gi|113631773|dbj|BAF25454.1| Os09g0491900 [Oryza sativa
           Japonica Group]
          Length = 681

 Score =  217 bits (553), Expect = 1e-54
 Identities = 101/158 (63%), Positives = 123/158 (77%)
 Frame = +2

Query: 2   GVPRTIVSDRDTKFLSHFWRVLWSKLGTKLLFSTTCHPQTDGQTEVVNRTLSQLLRTLIQ 181
           G+P+TIVSDRDTKFLS+FW+ LW+KLGT+LLFSTTCHPQTDGQTEVVNRTLS LLR LI+
Sbjct: 294 GMPKTIVSDRDTKFLSYFWKTLWAKLGTRLLFSTTCHPQTDGQTEVVNRTLSMLLRALIK 353

Query: 182 KNLKNWEDCLPFVEFAYNRSVHSATNFTPFEVVYGFNPLSPLDLVPIPVEEQASLDGXXX 361
           KNLK WE+CLP VEFAYNR+VHS TN  PFEVVYGF PL+P+DL+P+P++E++ ++    
Sbjct: 354 KNLKEWEECLPHVEFAYNRAVHSTTNMCPFEVVYGFKPLAPIDLLPLPLQERSDMEASKH 413

Query: 362 XXXXXXXXXXXXLNIEKQTKRYVKQATKGRKQVIFEPG 475
                         IEK++K Y   A K RK+V FEPG
Sbjct: 414 ATYVKKIHEKTKEAIEKRSKYYAAWANKDRKKVTFEPG 451


>gb|AAW28576.2| Gag-pol polyprotein, putative [Solanum demissum]
          Length = 1096

 Score =  212 bits (539), Expect = 5e-53
 Identities = 100/158 (63%), Positives = 118/158 (74%)
 Frame = +2

Query: 2    GVPRTIVSDRDTKFLSHFWRVLWSKLGTKLLFSTTCHPQTDGQTEVVNRTLSQLLRTLIQ 181
            G+PRTIVSDRD KFLSHFWR+LW KLGTKLLFST+CHPQTDGQTEVVNRTL  +LR +++
Sbjct: 784  GIPRTIVSDRDAKFLSHFWRILWGKLGTKLLFSTSCHPQTDGQTEVVNRTLGNMLRAILK 843

Query: 182  KNLKNWEDCLPFVEFAYNRSVHSATNFTPFEVVYGFNPLSPLDLVPIPVEEQASLDGXXX 361
              L +WED LP VEFAYNR+ HS+T  TPFEVVYGFNPL+PLDL+P+P  + A+LDG   
Sbjct: 844  GKLTSWEDYLPIVEFAYNRTFHSSTGKTPFEVVYGFNPLTPLDLLPLPTNDFANLDGKKK 903

Query: 362  XXXXXXXXXXXXLNIEKQTKRYVKQATKGRKQVIFEPG 475
                        L IEK+ K    +  KGRK VIF+PG
Sbjct: 904  ADMMKKIHEQTRLAIEKKNKEVALRRNKGRKYVIFKPG 941


>gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1588

 Score =  212 bits (539), Expect = 5e-53
 Identities = 100/158 (63%), Positives = 118/158 (74%)
 Frame = +2

Query: 2    GVPRTIVSDRDTKFLSHFWRVLWSKLGTKLLFSTTCHPQTDGQTEVVNRTLSQLLRTLIQ 181
            G+PRTIVSDRD KFLSHFWR+LW KLGTKLLFST+CHPQTDGQTEVVNRTL  +LR +++
Sbjct: 1276 GIPRTIVSDRDAKFLSHFWRILWGKLGTKLLFSTSCHPQTDGQTEVVNRTLGNMLRAILK 1335

Query: 182  KNLKNWEDCLPFVEFAYNRSVHSATNFTPFEVVYGFNPLSPLDLVPIPVEEQASLDGXXX 361
              L +WED LP VEFAYNR+ HS+T  TPFEVVYGFNPL+PLDL+P+P  + A+LDG   
Sbjct: 1336 GKLTSWEDYLPIVEFAYNRTFHSSTGKTPFEVVYGFNPLTPLDLLPLPTNDFANLDGKKK 1395

Query: 362  XXXXXXXXXXXXLNIEKQTKRYVKQATKGRKQVIFEPG 475
                        L IEK+ K    +  KGRK VIF+PG
Sbjct: 1396 ADMMKKIHEQTRLAIEKKNKEVALRRNKGRKYVIFKPG 1433


>gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1588

 Score =  212 bits (539), Expect = 5e-53
 Identities = 100/158 (63%), Positives = 118/158 (74%)
 Frame = +2

Query: 2    GVPRTIVSDRDTKFLSHFWRVLWSKLGTKLLFSTTCHPQTDGQTEVVNRTLSQLLRTLIQ 181
            G+PRTIVSDRD KFLSHFWR+LW KLGTKLLFST+CHPQTDGQTEVVNRTL  +LR +++
Sbjct: 1276 GIPRTIVSDRDAKFLSHFWRILWGKLGTKLLFSTSCHPQTDGQTEVVNRTLGNMLRAILK 1335

Query: 182  KNLKNWEDCLPFVEFAYNRSVHSATNFTPFEVVYGFNPLSPLDLVPIPVEEQASLDGXXX 361
              L +WED LP VEFAYNR+ HS+T  TPFEVVYGFNPL+PLDL+P+P  + A+LDG   
Sbjct: 1336 GKLTSWEDYLPIVEFAYNRTFHSSTGKTPFEVVYGFNPLTPLDLLPLPTNDFANLDGKKK 1395

Query: 362  XXXXXXXXXXXXLNIEKQTKRYVKQATKGRKQVIFEPG 475
                        L IEK+ K    +  KGRK VIF+PG
Sbjct: 1396 ADMMKKIHEQTRLAIEKKNKEVALRRNKGRKYVIFKPG 1433


>ref|XP_006606762.1| PREDICTED: uncharacterized protein LOC102662828 [Glycine max]
          Length = 612

 Score =  209 bits (531), Expect = 4e-52
 Identities = 99/159 (62%), Positives = 118/159 (74%), Gaps = 1/159 (0%)
 Frame = +2

Query: 2   GVPRTIVSDRDTKFLSHFWRVLWSKLGTKLLFSTTCHPQTDGQTEVVNRTLSQLLRTLIQ 181
           G+PR+IVSDRD KFLSHFWR LW K+GTKLLFSTTCHPQTDGQTEVVN+TL  LLRT+++
Sbjct: 379 GLPRSIVSDRDAKFLSHFWRTLWGKIGTKLLFSTTCHPQTDGQTEVVNKTLGTLLRTVLK 438

Query: 182 KNLKNWEDCLPFVEFAYNRSVHSATNFTPFEVVYGFNPLSPLDLVPIP-VEEQASLDGXX 358
           KNLK+WE CLP VEFAYNR+VHS TN +PFE+VYGFNPL+PLDL+P+P +      D   
Sbjct: 439 KNLKSWEACLPHVEFAYNRTVHSTTNCSPFEIVYGFNPLTPLDLLPMPNITMFKHKDAQA 498

Query: 359 XXXXXXXXXXXXXLNIEKQTKRYVKQATKGRKQVIFEPG 475
                          IEK+   Y +QA K RK+V+ EPG
Sbjct: 499 KAEYVKKLHEQVKAQIEKKNASYARQANKSRKKVVLEPG 537


>gb|AAU90169.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1154

 Score =  208 bits (529), Expect = 7e-52
 Identities = 96/158 (60%), Positives = 120/158 (75%)
 Frame = +2

Query: 2    GVPRTIVSDRDTKFLSHFWRVLWSKLGTKLLFSTTCHPQTDGQTEVVNRTLSQLLRTLIQ 181
            GVPRTIVSDRD KF+S+FW+ LW+KLGTKLLFSTTCH Q DGQ EVVNRTLS LLR +I+
Sbjct: 925  GVPRTIVSDRDVKFMSYFWKTLWAKLGTKLLFSTTCHSQIDGQMEVVNRTLSMLLRMMIK 984

Query: 182  KNLKNWEDCLPFVEFAYNRSVHSATNFTPFEVVYGFNPLSPLDLVPIPVEEQASLDGXXX 361
            KNLK WEDCLP VEFAYNR VHS T  +PFEVVYGFNP++PLDL+P+P++E+A+++    
Sbjct: 985  KNLKEWEDCLPHVEFAYNRVVHSTTQLSPFEVVYGFNPITPLDLLPLPLQERANMEATKR 1044

Query: 362  XXXXXXXXXXXXLNIEKQTKRYVKQATKGRKQVIFEPG 475
                          IE+  + Y  +A K RK+++F+PG
Sbjct: 1045 ADYVKKMHEKTKETIERIIQSYAAKANKDRKKMLFQPG 1082


>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
          Length = 1618

 Score =  206 bits (525), Expect = 2e-51
 Identities = 95/158 (60%), Positives = 115/158 (72%)
 Frame = +2

Query: 2    GVPRTIVSDRDTKFLSHFWRVLWSKLGTKLLFSTTCHPQTDGQTEVVNRTLSQLLRTLIQ 181
            GVP TIVSDRD KFLSHFWR LW+KLGTKLLFSTTCHPQTDGQTEVVNRTLS +LR +++
Sbjct: 1326 GVPNTIVSDRDAKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLK 1385

Query: 182  KNLKNWEDCLPFVEFAYNRSVHSATNFTPFEVVYGFNPLSPLDLVPIPVEEQASLDGXXX 361
            KN+K WEDCLP +EFAYNRS+HS T   PF++VYG  P +P+DL+P+P  E+ + D    
Sbjct: 1386 KNIKMWEDCLPHIEFAYNRSLHSTTKMCPFQIVYGLLPRAPIDLMPLPSSEKLNFDATRR 1445

Query: 362  XXXXXXXXXXXXLNIEKQTKRYVKQATKGRKQVIFEPG 475
                         NIE+   RY   + KGRK++ FEPG
Sbjct: 1446 AELMLKLHETTKENIERMNARYKFASDKGRKEINFEPG 1483


>dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group]
          Length = 1587

 Score =  205 bits (522), Expect = 4e-51
 Identities = 96/158 (60%), Positives = 114/158 (72%)
 Frame = +2

Query: 2    GVPRTIVSDRDTKFLSHFWRVLWSKLGTKLLFSTTCHPQTDGQTEVVNRTLSQLLRTLIQ 181
            GVP TIVSDRDTKFLSHFWR LW+KLGTKLLFSTTCHPQTDGQTEVVNRTLS +LR +++
Sbjct: 1351 GVPNTIVSDRDTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLK 1410

Query: 182  KNLKNWEDCLPFVEFAYNRSVHSATNFTPFEVVYGFNPLSPLDLVPIPVEEQASLDGXXX 361
            KN+K WE+CLP VEFAYNRS HS T   PFE+VYG  P +P+DL+P+P  E+ + D    
Sbjct: 1411 KNIKMWEECLPHVEFAYNRSQHSTTKKCPFEIVYGLLPRAPIDLLPLPTSERVNFDAKYR 1470

Query: 362  XXXXXXXXXXXXLNIEKQTKRYVKQATKGRKQVIFEPG 475
                         NIE+   +Y    +KG+K V FEPG
Sbjct: 1471 AELMLKLHETTKENIERMNIKYKLAGSKGKKHVAFEPG 1508


>gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|15217296|gb|AAK92640.1|AC079634_1 Putative
            retroelement [Oryza sativa Japonica Group]
            gi|31431373|gb|AAP53161.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 1708

 Score =  205 bits (522), Expect = 4e-51
 Identities = 96/158 (60%), Positives = 114/158 (72%)
 Frame = +2

Query: 2    GVPRTIVSDRDTKFLSHFWRVLWSKLGTKLLFSTTCHPQTDGQTEVVNRTLSQLLRTLIQ 181
            GVP TIVSDRDTKFLSHFWR LW+KLGTKLLFSTTCHPQTDGQTEVVNRTLS +LR +++
Sbjct: 1351 GVPNTIVSDRDTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLK 1410

Query: 182  KNLKNWEDCLPFVEFAYNRSVHSATNFTPFEVVYGFNPLSPLDLVPIPVEEQASLDGXXX 361
            KN+K WE+CLP VEFAYNRS HS T   PFE+VYG  P +P+DL+P+P  E+ + D    
Sbjct: 1411 KNIKMWEECLPHVEFAYNRSQHSTTKKCPFEIVYGLLPRAPIDLLPLPTSERVNFDAKYH 1470

Query: 362  XXXXXXXXXXXXLNIEKQTKRYVKQATKGRKQVIFEPG 475
                         NIE+   +Y    +KG+K V FEPG
Sbjct: 1471 AELMLKLHETTKENIERMNIKYKLAGSKGKKHVAFEPG 1508


>gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare]
          Length = 1717

 Score =  205 bits (522), Expect = 4e-51
 Identities = 96/158 (60%), Positives = 113/158 (71%)
 Frame = +2

Query: 2    GVPRTIVSDRDTKFLSHFWRVLWSKLGTKLLFSTTCHPQTDGQTEVVNRTLSQLLRTLIQ 181
            GVP TIVSDRD KFLSHFWR LW+KLGTKLLFSTTCHPQTDGQTEVVNR+LS +LR +++
Sbjct: 1379 GVPNTIVSDRDAKFLSHFWRCLWAKLGTKLLFSTTCHPQTDGQTEVVNRSLSTMLRAVLK 1438

Query: 182  KNLKNWEDCLPFVEFAYNRSVHSATNFTPFEVVYGFNPLSPLDLVPIPVEEQASLDGXXX 361
             NLK WE+CLP +EFAYNRS+HS T   PFE+VYGF P +P+DL+PIP  E+ + D    
Sbjct: 1439 TNLKLWEECLPHIEFAYNRSLHSTTKMCPFEIVYGFLPRAPIDLLPIPSSEKVNFDAKER 1498

Query: 362  XXXXXXXXXXXXLNIEKQTKRYVKQATKGRKQVIFEPG 475
                         NIE+   RY     KGRK V+F PG
Sbjct: 1499 AELILKMHELTKENIERMNARYKLAGDKGRKHVVFAPG 1536


>gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare]
          Length = 1720

 Score =  205 bits (521), Expect = 6e-51
 Identities = 95/158 (60%), Positives = 113/158 (71%)
 Frame = +2

Query: 2    GVPRTIVSDRDTKFLSHFWRVLWSKLGTKLLFSTTCHPQTDGQTEVVNRTLSQLLRTLIQ 181
            GVP TIVSDRD KFLSHFWR LW+KLGTKLLFSTTCHPQTDGQTEVVNR+LS +LR +++
Sbjct: 1382 GVPNTIVSDRDAKFLSHFWRCLWAKLGTKLLFSTTCHPQTDGQTEVVNRSLSTMLRAVLK 1441

Query: 182  KNLKNWEDCLPFVEFAYNRSVHSATNFTPFEVVYGFNPLSPLDLVPIPVEEQASLDGXXX 361
             N+K WE+CLP +EFAYNRS+HS T   PFE+VYGF P +P+DL+PIP  E+ + D    
Sbjct: 1442 NNIKLWEECLPHIEFAYNRSLHSTTKMCPFEIVYGFLPRAPIDLLPIPSSEKVNFDAKER 1501

Query: 362  XXXXXXXXXXXXLNIEKQTKRYVKQATKGRKQVIFEPG 475
                         NIE+   RY     KGRK V+F PG
Sbjct: 1502 AELILKMHELTKENIERMNARYKLAGDKGRKHVVFAPG 1539


>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
            gi|31431012|gb|AAP52850.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 2447

 Score =  204 bits (519), Expect = 1e-50
 Identities = 93/158 (58%), Positives = 115/158 (72%)
 Frame = +2

Query: 2    GVPRTIVSDRDTKFLSHFWRVLWSKLGTKLLFSTTCHPQTDGQTEVVNRTLSQLLRTLIQ 181
            GVP TIVSDRDTKFLSHFWR LW+KLGTKLLFSTTCHPQTDGQTEVVNRTLS +LR +++
Sbjct: 1323 GVPNTIVSDRDTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLK 1382

Query: 182  KNLKNWEDCLPFVEFAYNRSVHSATNFTPFEVVYGFNPLSPLDLVPIPVEEQASLDGXXX 361
            KN+K WE+CLP +EFAYNRS+HS T   PF++VYG  P +P+DL+P+P  E+ + D    
Sbjct: 1383 KNIKMWEECLPHIEFAYNRSLHSTTKMCPFQIVYGLLPRAPIDLMPLPSSEKLNFDAKQR 1442

Query: 362  XXXXXXXXXXXXLNIEKQTKRYVKQATKGRKQVIFEPG 475
                         NIE+   +Y     KGR+++ FEPG
Sbjct: 1443 AELMLKLHETTKENIERMNAKYKFAGDKGRRELTFEPG 1480



 Score =  105 bits (263), Expect = 5e-21
 Identities = 48/102 (47%), Positives = 67/102 (65%)
 Frame = +2

Query: 2    GVPRTIVSDRDTKFLSHFWRVLWSKLGTKLLFSTTCHPQTDGQTEVVNRTLSQLLRTLIQ 181
            GVP+ IVSDR+++F SHFW+ L  +LGT+L FST  HPQTDGQTE +N+ L  +L   + 
Sbjct: 2145 GVPKKIVSDRESQFTSHFWKKLQEELGTRLNFSTAYHPQTDGQTERLNQILEDMLHACVL 2204

Query: 182  KNLKNWEDCLPFVEFAYNRSVHSATNFTPFEVVYGFNPLSPL 307
               K W+  LP+ EF+YN S  ++    P+E +YG    +PL
Sbjct: 2205 DFGKTWDKSLPYAEFSYNNSYQASIQMAPYEALYGRKCRTPL 2246


>gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 889

 Score =  203 bits (517), Expect = 2e-50
 Identities = 95/158 (60%), Positives = 113/158 (71%)
 Frame = +2

Query: 2    GVPRTIVSDRDTKFLSHFWRVLWSKLGTKLLFSTTCHPQTDGQTEVVNRTLSQLLRTLIQ 181
            GVP TIVSDRDTKFLSHFWR LW+KLGTKLLFSTTCHPQTDGQTEVVNRTLS +LR +++
Sbjct: 664  GVPNTIVSDRDTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLK 723

Query: 182  KNLKNWEDCLPFVEFAYNRSVHSATNFTPFEVVYGFNPLSPLDLVPIPVEEQASLDGXXX 361
            KN+K WE+CLP VEFAYN S HS T   PFE+VYG  P +P+DL+P+P  E+ + D    
Sbjct: 724  KNIKMWEECLPHVEFAYNHSQHSTTKKCPFEIVYGLLPRAPIDLLPLPTSERVNFDAKHR 783

Query: 362  XXXXXXXXXXXXLNIEKQTKRYVKQATKGRKQVIFEPG 475
                         NIE+   +Y    +KG+K V FEPG
Sbjct: 784  AELMLKLHETTKENIERMNIKYKLAGSKGKKHVAFEPG 821


>gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum subsp.
            aegilopoides]
          Length = 1704

 Score =  203 bits (516), Expect = 2e-50
 Identities = 94/158 (59%), Positives = 112/158 (70%)
 Frame = +2

Query: 2    GVPRTIVSDRDTKFLSHFWRVLWSKLGTKLLFSTTCHPQTDGQTEVVNRTLSQLLRTLIQ 181
            GVP TIVSDRDTKFLSHFWR LW+KLG KLLFSTTCHPQTDGQTEVVNRTLS +LR +++
Sbjct: 1367 GVPNTIVSDRDTKFLSHFWRCLWAKLGNKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLK 1426

Query: 182  KNLKNWEDCLPFVEFAYNRSVHSATNFTPFEVVYGFNPLSPLDLVPIPVEEQASLDGXXX 361
             N K WE+CLP +EFAYNRS+HS T   PFE+VYGF P +P+DL+P+P  E+ + D    
Sbjct: 1427 NNKKMWEECLPHIEFAYNRSLHSTTKMCPFEIVYGFLPRAPIDLLPLPSSEKVNFDAKER 1486

Query: 362  XXXXXXXXXXXXLNIEKQTKRYVKQATKGRKQVIFEPG 475
                         NIE+   +Y     KGRK V+F PG
Sbjct: 1487 SELILKIHELTKENIERMNAKYKLARDKGRKHVVFAPG 1524