BLASTX nr result

ID: Rehmannia22_contig00031625 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00031625
         (310 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_200455.1| FBD-associated F-box protein [Arabidopsis thali...    57   3e-06

>ref|NP_200455.1| FBD-associated F-box protein [Arabidopsis thaliana]
           gi|75262697|sp|Q9FM87.1|FBD26_ARATH RecName:
           Full=Putative FBD-associated F-box protein At5g56440
           gi|10177843|dbj|BAB11272.1| unnamed protein product
           [Arabidopsis thaliana] gi|332009382|gb|AED96765.1|
           FBD-associated F-box protein [Arabidopsis thaliana]
          Length = 430

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 4/101 (3%)
 Frame = +2

Query: 2   RFLWAHVSNLXXXXXXXXXXXXXXXXGIIYRVMLLRKVQTINTFRLTYLRNCGKYELETW 181
           R+LW HV  L                  + + +LL +   + T  L+  RNC   ++ETW
Sbjct: 35  RYLWKHVPKLDYRDPSLVDTEHWRASRFVDKFLLLHEAPVLETLHLSLSRNCPPSDIETW 94

Query: 182 LATAIVRDVQKLDL--YFPCN--VVLPQCIFTCKTLVDMRL 292
           ++ AI R V+ L +  Y P    + LP+ ++TC+TLV + L
Sbjct: 95  ISVAISRRVRNLHIYRYIPSTGPIRLPRSLYTCETLVSLYL 135


Top