BLASTX nr result

ID: Rehmannia22_contig00031575 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00031575
         (331 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAO49743.1| nuclear pore complex protein Nup43a [Nicotiana b...    65   9e-09
ref|XP_004242624.1| PREDICTED: uncharacterized protein LOC101252...    63   5e-08
ref|XP_006343594.1| PREDICTED: uncharacterized protein LOC102598...    62   8e-08
gb|EOY31514.1| Transducin/WD40 repeat-like superfamily protein i...    59   5e-07
ref|XP_004507767.1| PREDICTED: nucleoporin Nup43-like [Cicer ari...    59   9e-07

>dbj|BAO49743.1| nuclear pore complex protein Nup43a [Nicotiana benthamiana]
          Length = 362

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 36/88 (40%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
 Frame = -1

Query: 247 MALIPSHNP-YSLQIHKLPQYTYIDALRWLPHLSTFTRHILLATYDAD-----XXXXXXX 86
           MA+I S +    LQ+H+ PQ  Y+D+LRWLP LS F RHI+LAT+++D            
Sbjct: 1   MAVITSSSSSQQLQVHRYPQNNYVDSLRWLPQLSAFHRHIILATFNSDSSNSSLQILNLT 60

Query: 85  XXXXXXXXTIPSVALQASVSAPSRIASL 2
                     P + LQ S++ PSRI+SL
Sbjct: 61  QKTSNSDSNSPQITLQCSLTTPSRISSL 88


>ref|XP_004242624.1| PREDICTED: uncharacterized protein LOC101252300 [Solanum
           lycopersicum]
          Length = 358

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 34/83 (40%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
 Frame = -1

Query: 247 MALIPSHNPYSLQIHKLPQYTYIDALRWLPHLSTFTRHILLATYDAD-XXXXXXXXXXXX 71
           MA++ S +  +LQ+H+ PQ  YID+LRWLP LS F RHI+LA +D++             
Sbjct: 1   MAVLTSSSQ-NLQVHRFPQDYYIDSLRWLPQLSAFHRHIILAAFDSESSTSSLQILNSSN 59

Query: 70  XXXTIPSVALQASVSAPSRIASL 2
                P +  Q+S++ PSRI SL
Sbjct: 60  SSSNTPELTFQSSLTTPSRITSL 82


>ref|XP_006343594.1| PREDICTED: uncharacterized protein LOC102598589 [Solanum tuberosum]
          Length = 358

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 34/83 (40%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
 Frame = -1

Query: 247 MALIPSHNPYSLQIHKLPQYTYIDALRWLPHLSTFTRHILLATYDAD-XXXXXXXXXXXX 71
           MA++ S +  +LQ+H+ PQ  YID+LRWLP LS F RHI+LA +D++             
Sbjct: 1   MAVLTSSSQ-NLQVHRFPQDHYIDSLRWLPQLSAFHRHIILAAFDSESSTSSLQILNSSN 59

Query: 70  XXXTIPSVALQASVSAPSRIASL 2
                P +  Q+S++ PSRI SL
Sbjct: 60  SSSNPPELTFQSSLTTPSRITSL 82


>gb|EOY31514.1| Transducin/WD40 repeat-like superfamily protein isoform 2, partial
           [Theobroma cacao]
          Length = 342

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 38/98 (38%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
 Frame = -1

Query: 283 SPKTPQSPLH--STMALIPSHNPYSLQIHKLPQYTYIDALRWLPHLSTFTRHILLATYDA 110
           +P  P  PL    TMA+    NP   Q+H++PQ  YIDA+RWLP +S F R   +A +D 
Sbjct: 50  TPLPPSKPLKILETMAISGPQNPS--QVHRIPQSKYIDAVRWLPPVSAFDRFAAIAYFDT 107

Query: 109 DXXXXXXXXXXXXXXXTIPSVAL--QASVSAPSRIASL 2
           D                 PS  L  Q+S + PSRI+SL
Sbjct: 108 DSNSPSVEIHCLNPSVQNPSPTLTPQSSWTPPSRISSL 145


>ref|XP_004507767.1| PREDICTED: nucleoporin Nup43-like [Cicer arietinum]
          Length = 352

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 33/75 (44%), Positives = 42/75 (56%)
 Frame = -1

Query: 226 NPYSLQIHKLPQYTYIDALRWLPHLSTFTRHILLATYDADXXXXXXXXXXXXXXXTIPSV 47
           N  + QIH+ PQY YIDA+RWLP LS F R  +LAT+D D                  S 
Sbjct: 6   NSETSQIHRFPQYKYIDAVRWLPVLSAFNRFAVLATFDYDSDLSSIEIHSFKPNPI--SF 63

Query: 46  ALQASVSAPSRIASL 2
             Q+S ++PSRI+SL
Sbjct: 64  EFQSSWNSPSRISSL 78


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