BLASTX nr result

ID: Rehmannia22_contig00031379 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00031379
         (438 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143230.1| PREDICTED: putative F-box/LRR-repeat protein...    56   3e-09
ref|XP_004300788.1| PREDICTED: F-box/LRR-repeat protein At3g0303...    60   4e-07
ref|XP_004298789.1| PREDICTED: F-box/LRR-repeat protein At4g1409...    59   7e-07
gb|AGO67237.1| f-box family protein [Silene vulgaris]                  58   1e-06
ref|XP_006301579.1| hypothetical protein CARUB_v10022017mg, part...    56   4e-06

>ref|XP_004143230.1| PREDICTED: putative F-box/LRR-repeat protein At3g18150-like
           [Cucumis sativus] gi|449503744|ref|XP_004162155.1|
           PREDICTED: putative F-box/LRR-repeat protein
           At3g18150-like [Cucumis sativus]
          Length = 512

 Score = 56.2 bits (134), Expect(3) = 3e-09
 Identities = 27/57 (47%), Positives = 36/57 (63%)
 Frame = -3

Query: 433 KRLKTCEVNKDFINDLPDPVLVHILSFLPLRDAIRTVLLPRFGKLWLSMPVLDLDNC 263
           KR +T E   D+I+ LP+ VLV ILS+LP RDA++  L+ RF  LW  +  L  D C
Sbjct: 6   KRTRTEEDRNDWISQLPESVLVDILSYLPTRDAVKMALISRFRNLWTYIHHLSFDEC 62



 Score = 27.7 bits (60), Expect(3) = 3e-09
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = -1

Query: 219 EKLMDIVHKVWNHHDNNTLDKLHLRFAFAL 130
           E+ ++++  V   H+   +D+ HL+FAF L
Sbjct: 82  ERFLNLIRHVLILHERTIIDEFHLKFAFNL 111



 Score = 22.3 bits (46), Expect(3) = 3e-09
 Identities = 9/26 (34%), Positives = 18/26 (69%)
 Frame = -2

Query: 80  SKEKAAA*QIEKLVGYAISRKVKVLD 3
           SKE+  A ++   + +++ ++VKVLD
Sbjct: 127 SKERRMASELTTWIKFSLRKQVKVLD 152


>ref|XP_004300788.1| PREDICTED: F-box/LRR-repeat protein At3g03030-like [Fragaria vesca
           subsp. vesca]
          Length = 169

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 30/56 (53%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
 Frame = -3

Query: 433 KRLKTCEVNKDFINDLPDPVLVHILSFLPLRDAIRT-VLLPRFGKLWLSMPVLDLD 269
           KRLK C  ++D I+ LPD +L HILSFL  R+A++T VL  R+  +W S+P+LDLD
Sbjct: 15  KRLKPCSNHEDRISGLPDEILCHILSFLFTREAVKTSVLSHRWTNVWTSVPILDLD 70


>ref|XP_004298789.1| PREDICTED: F-box/LRR-repeat protein At4g14096-like [Fragaria vesca
           subsp. vesca]
          Length = 516

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 28/55 (50%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
 Frame = -3

Query: 430 RLKTCEVNKDFINDLPDPVLVHILSFLPLRDAIRT-VLLPRFGKLWLSMPVLDLD 269
           RLK C  N+D I+ +PD VL HILSFL  R+A++T VL  R+  +W S+P++D+D
Sbjct: 16  RLKLCSDNEDRISGMPDAVLCHILSFLSTREAVKTSVLSHRWNNVWASVPIVDVD 70


>gb|AGO67237.1| f-box family protein [Silene vulgaris]
          Length = 456

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 27/55 (49%), Positives = 39/55 (70%)
 Frame = -3

Query: 433 KRLKTCEVNKDFINDLPDPVLVHILSFLPLRDAIRTVLLPRFGKLWLSMPVLDLD 269
           KRL   + ++D +++LPD V+V ILS++P+ DA+RTVLL RFG LW  +  L  D
Sbjct: 7   KRLCLSKEDRDRLSELPDTVIVRILSYMPIIDAVRTVLLRRFGNLWTLVDTLKFD 61


>ref|XP_006301579.1| hypothetical protein CARUB_v10022017mg, partial [Capsella rubella]
           gi|482570289|gb|EOA34477.1| hypothetical protein
           CARUB_v10022017mg, partial [Capsella rubella]
          Length = 292

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 28/58 (48%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
 Frame = -3

Query: 427 LKTCEVNKDFINDLPDPVLVHILSFLPLRDAIRT-VLLPRFGKLWLSMPVLDLDNCDV 257
           L+     +D I+ LPD +L+HILSF+P + AIRT VL  R+  +W + P+L LDNC V
Sbjct: 16  LENKRAKRDVIDSLPDDILIHILSFVPTKFAIRTSVLSKRWRNIWCNTPLLYLDNCIV 73


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