BLASTX nr result

ID: Rehmannia22_contig00031374 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00031374
         (410 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY10314.1| RING/U-box superfamily protein, putative [Theobro...    56   4e-06

>gb|EOY10314.1| RING/U-box superfamily protein, putative [Theobroma cacao]
          Length = 372

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 51/153 (33%), Positives = 73/153 (47%), Gaps = 25/153 (16%)
 Frame = +2

Query: 26  QRNCVEQVVGDRQRNFVEQVV------GDIENTGNREIRNE--NVESDENGVKRFRRSIS 181
           QRN    V+ D +    E+ V       D+ + GN +  +    +  D NG++  RRS+S
Sbjct: 222 QRNDAISVIQDLEMGVREEAVITLVVSDDVGDMGNAKESSSMIGIGEDGNGIQPLRRSVS 281

Query: 182 LGAFPFQRHLL-ISDVLKIEGSDEDLLQVGKDQYSWRGNIGSSKGF-------------- 316
           + +   Q  +  ++D+L+I   DEDL      Q S    IGSSK F              
Sbjct: 282 MSSSLCQGQVFSVADILRISEEDEDLQMEHHFQSSL--GIGSSKQFDGEYCKSNCRNGVL 339

Query: 317 --VRSHDVMKRSVSTGGLMFTVHGKGKNNSILP 409
             VRS   MKRS+STG  MF+ + K + NSILP
Sbjct: 340 NLVRSPLAMKRSISTGRFMFSRYEKDR-NSILP 371


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