BLASTX nr result
ID: Rehmannia22_contig00030989
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00030989
(1014 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006482125.1| PREDICTED: pentatricopeptide repeat-containi... 325 2e-86
ref|XP_006430611.1| hypothetical protein CICLE_v10011485mg [Citr... 321 3e-85
ref|XP_003633738.1| PREDICTED: pentatricopeptide repeat-containi... 321 3e-85
ref|XP_002305195.1| pentatricopeptide repeat-containing family p... 320 6e-85
emb|CAN82481.1| hypothetical protein VITISV_012747 [Vitis vinifera] 320 7e-85
ref|XP_002531188.1| pentatricopeptide repeat-containing protein,... 309 1e-81
gb|EOY14228.1| Pentatricopeptide repeat (PPR) superfamily protei... 303 9e-80
gb|EOY14227.1| Pentatricopeptide repeat (PPR) superfamily protei... 303 9e-80
gb|EOY14225.1| Pentatricopeptide repeat superfamily protein, put... 303 9e-80
ref|XP_004240257.1| PREDICTED: pentatricopeptide repeat-containi... 300 8e-79
ref|XP_004301459.1| PREDICTED: pentatricopeptide repeat-containi... 291 3e-76
ref|XP_004171986.1| PREDICTED: pentatricopeptide repeat-containi... 288 2e-75
ref|XP_004140361.1| PREDICTED: pentatricopeptide repeat-containi... 287 4e-75
gb|EMJ15730.1| hypothetical protein PRUPE_ppa014874mg, partial [... 281 2e-73
ref|XP_004486552.1| PREDICTED: pentatricopeptide repeat-containi... 273 8e-71
ref|XP_002887023.1| pentatricopeptide repeat-containing protein ... 260 7e-67
gb|EOY14226.1| Pentatricopeptide repeat superfamily protein, put... 257 6e-66
gb|EOY14229.1| Pentatricopeptide repeat (PPR) superfamily protei... 255 2e-65
ref|NP_849849.1| pentatricopeptide repeat-containing protein [Ar... 255 2e-65
ref|XP_006302104.1| hypothetical protein CARUB_v10020095mg [Caps... 250 5e-64
>ref|XP_006482125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
mitochondrial-like isoform X1 [Citrus sinensis]
Length = 553
Score = 325 bits (832), Expect = 2e-86
Identities = 162/287 (56%), Positives = 212/287 (73%), Gaps = 2/287 (0%)
Frame = +1
Query: 1 IVNTCLVYDMIENQRIEEGLVLLKWMLQKNMILDTISYSLVVFAKVKMGKSDSAKEIYEE 180
IVNT L+ +I+ +RIEEG+VLLK ML+KNMI DTI+YSL+V+AKVKMG +SA +YEE
Sbjct: 263 IVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMGNLESALVVYEE 322
Query: 181 MLKRGFKENAFVCNLFVGAYCEEGRIDEAIGLLEEMASLGFKPSDETFNQLIKGCSLDGR 360
MLKRGF N+FV F+GAYCE G+I+EA L++EM + G KP DETFN LI+GC+ R
Sbjct: 323 MLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKR 382
Query: 361 SEDSLAFCKQMMSMGLLPSCSSVNEMFGKLCENGKTKEADETLTILLDKGFTPDENTYSH 540
E+SL++C+QMMS LLPSCS+ NEM +LCE G K+A+ LT+ LDKGF+P+E TYSH
Sbjct: 383 IEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSH 442
Query: 541 LISGYGKDDNMEGLTKLLFEMEYRSIYPNMFGFTSVIISLCKCGRLEEAEKYLKTMKARS 720
LI GY K+ ++ + KL +EMEY+SI P + +TS+I SLC+CG+LEEA+KY K MK+ S
Sbjct: 443 LIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHS 502
Query: 721 FIPSPNIYERLIAGHLEKGSKTRACQLYNEMVGTG--SNTGQTCGIS 855
+P +IYE L+ HLEKG+K +A L EMV G +T C S
Sbjct: 503 LVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCSAS 549
Score = 84.0 bits (206), Expect = 9e-14
Identities = 65/282 (23%), Positives = 111/282 (39%), Gaps = 35/282 (12%)
Frame = +1
Query: 73 WMLQKNMILDTISYSLVVFAKVKMGKSDSAKEIYEEMLKRGFKENAFVCNLFVGAYCEEG 252
++ Q+ L IS++ ++ K ++D IY+ ML+ N + A C+ G
Sbjct: 182 YLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGG 241
Query: 253 RIDEAIGLLEEMASLGFKPSDETFNQLIKGCSLDGRSEDSLAFCKQMM------------ 396
++ + +L+ + P LI + R E+ + K+M+
Sbjct: 242 QLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 301
Query: 397 -------SMGLLPSCSSVNE----------------MFGKLCENGKTKEADETLTILLDK 507
MG L S V E G CE GK +EA+ + + +
Sbjct: 302 LIVYAKVKMGNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 361
Query: 508 GFTPDENTYSHLISGYGKDDNMEGLTKLLFEMEYRSIYPNMFGFTSVIISLCKCGRLEEA 687
G P + T++ LI G K +E +M R + P+ F +I LC+CG ++A
Sbjct: 362 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 421
Query: 688 EKYLKTMKARSFIPSPNIYERLIAGHLEKGSKTRACQLYNEM 813
L + F P+ Y LI G+ ++G +LY EM
Sbjct: 422 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 463
>ref|XP_006430611.1| hypothetical protein CICLE_v10011485mg [Citrus clementina]
gi|557532668|gb|ESR43851.1| hypothetical protein
CICLE_v10011485mg [Citrus clementina]
Length = 521
Score = 321 bits (823), Expect = 3e-85
Identities = 158/275 (57%), Positives = 207/275 (75%)
Frame = +1
Query: 1 IVNTCLVYDMIENQRIEEGLVLLKWMLQKNMILDTISYSLVVFAKVKMGKSDSAKEIYEE 180
IVNT L+ +I+ +RIEEG+VLLK ML+KNMI DTI+YSL+V+AKVKM +SA +YEE
Sbjct: 231 IVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEE 290
Query: 181 MLKRGFKENAFVCNLFVGAYCEEGRIDEAIGLLEEMASLGFKPSDETFNQLIKGCSLDGR 360
MLKRGF N+FV F+GAYCE G+I+EA L++EM + G KP DETFN LI+GC+ R
Sbjct: 291 MLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKR 350
Query: 361 SEDSLAFCKQMMSMGLLPSCSSVNEMFGKLCENGKTKEADETLTILLDKGFTPDENTYSH 540
E+SL++C+QMMS LLPSCS+ NEM +LCE G K+A+ LT+ LDKGF+P+E TYSH
Sbjct: 351 IEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNVKQANGMLTLALDKGFSPNEMTYSH 410
Query: 541 LISGYGKDDNMEGLTKLLFEMEYRSIYPNMFGFTSVIISLCKCGRLEEAEKYLKTMKARS 720
LI GY K+ ++ + KL +EMEY+SI P + +TS+I SLC+CG+LEEA+KY K MK+ S
Sbjct: 411 LIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHS 470
Query: 721 FIPSPNIYERLIAGHLEKGSKTRACQLYNEMVGTG 825
+P +IYE L+ HLEKG+K +A L EMV G
Sbjct: 471 LVPGVDIYESLVGIHLEKGNKVKALHLCEEMVSEG 505
>ref|XP_003633738.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
mitochondrial-like [Vitis vinifera]
Length = 547
Score = 321 bits (822), Expect = 3e-85
Identities = 158/275 (57%), Positives = 204/275 (74%)
Frame = +1
Query: 1 IVNTCLVYDMIENQRIEEGLVLLKWMLQKNMILDTISYSLVVFAKVKMGKSDSAKEIYEE 180
IVNTC+++ M+E R+E+G+++LK +LQKNMILDTISYSL+ +AKVK G DSA E+YEE
Sbjct: 262 IVNTCMIFRMLEEGRVEQGMLILKRLLQKNMILDTISYSLIAYAKVKYGTLDSAWEVYEE 321
Query: 181 MLKRGFKENAFVCNLFVGAYCEEGRIDEAIGLLEEMASLGFKPSDETFNQLIKGCSLDGR 360
ML RGF NAFV LF+G++C EGRI+EA L+++M + G P DETFN LI GCS GR
Sbjct: 322 MLNRGFHPNAFVYTLFIGSHCVEGRIEEANELMQDMENAGLMPYDETFNLLIAGCSKAGR 381
Query: 361 SEDSLAFCKQMMSMGLLPSCSSVNEMFGKLCENGKTKEADETLTILLDKGFTPDENTYSH 540
E+ L C++MM GL+PSC + N M GKLCE+G K ADE LT+LLDKGF PDE TYS+
Sbjct: 382 LEEGLRLCERMMQRGLVPSCWAFNLMAGKLCESGVVKRADEMLTLLLDKGFVPDEITYSN 441
Query: 541 LISGYGKDDNMEGLTKLLFEMEYRSIYPNMFGFTSVIISLCKCGRLEEAEKYLKTMKARS 720
LI+ YGK ++ + KL +EMEYRS+ P + F S+I SLC+C +LE+AEKYL+ MK RS
Sbjct: 442 LIASYGKLGEIQQVLKLYYEMEYRSLSPGLLAFESLIRSLCQCRKLEKAEKYLRIMKDRS 501
Query: 721 FIPSPNIYERLIAGHLEKGSKTRACQLYNEMVGTG 825
S +YE LI+ + EKG + RA QL+NEMV G
Sbjct: 502 IAISTCVYETLISSYFEKGDELRASQLHNEMVSRG 536
Score = 75.5 bits (184), Expect = 3e-11
Identities = 61/274 (22%), Positives = 115/274 (41%), Gaps = 35/274 (12%)
Frame = +1
Query: 97 LDTISYSLVVFAKVKMGKSDSAKEIYEEMLKRGFKENAFVCNLFVGAYCEEGRIDEAIGL 276
L IS++ ++ K +IYE M++ N ++ + A C+EG + + + +
Sbjct: 189 LSLISFNTLLHVVQKSDNYPLVWKIYEHMIRVRKYPNEVSVSVMISALCKEGALQKFVDM 248
Query: 277 LEEM------------ASLGFKPSDE---------TFNQLIKGCSLDGRSEDSLAFCK-- 387
L+ + + F+ +E L K LD S +A+ K
Sbjct: 249 LDRIHGKRCSPIVIVNTCMIFRMLEEGRVEQGMLILKRLLQKNMILDTISYSLIAYAKVK 308
Query: 388 ------------QMMSMGLLPSCSSVNEMFGKLCENGKTKEADETLTILLDKGFTPDENT 531
+M++ G P+ G C G+ +EA+E + + + G P + T
Sbjct: 309 YGTLDSAWEVYEEMLNRGFHPNAFVYTLFIGSHCVEGRIEEANELMQDMENAGLMPYDET 368
Query: 532 YSHLISGYGKDDNMEGLTKLLFEMEYRSIYPNMFGFTSVIISLCKCGRLEEAEKYLKTMK 711
++ LI+G K +E +L M R + P+ + F + LC+ G ++ A++ L +
Sbjct: 369 FNLLIAGCSKAGRLEEGLRLCERMMQRGLVPSCWAFNLMAGKLCESGVVKRADEMLTLLL 428
Query: 712 ARSFIPSPNIYERLIAGHLEKGSKTRACQLYNEM 813
+ F+P Y LIA + + G + +LY EM
Sbjct: 429 DKGFVPDEITYSNLIASYGKLGEIQQVLKLYYEM 462
Score = 72.8 bits (177), Expect = 2e-10
Identities = 49/195 (25%), Positives = 88/195 (45%)
Frame = +1
Query: 43 RIEEGLVLLKWMLQKNMILDTISYSLVVFAKVKMGKSDSAKEIYEEMLKRGFKENAFVCN 222
RIEE L++ M ++ +++L++ K G+ + + E M++RG + + N
Sbjct: 346 RIEEANELMQDMENAGLMPYDETFNLLIAGCSKAGRLEEGLRLCERMMQRGLVPSCWAFN 405
Query: 223 LFVGAYCEEGRIDEAIGLLEEMASLGFKPSDETFNQLIKGCSLDGRSEDSLAFCKQMMSM 402
L G CE G + A +L + GF P + T++ LI G + L +M
Sbjct: 406 LMAGKLCESGVVKRADEMLTLLLDKGFVPDEITYSNLIASYGKLGEIQQVLKLYYEMEYR 465
Query: 403 GLLPSCSSVNEMFGKLCENGKTKEADETLTILLDKGFTPDENTYSHLISGYGKDDNMEGL 582
L P + + LC+ K ++A++ L I+ D+ Y LIS Y + +
Sbjct: 466 SLSPGLLAFESLIRSLCQCRKLEKAEKYLRIMKDRSIAISTCVYETLISSYFEKGDELRA 525
Query: 583 TKLLFEMEYRSIYPN 627
++L EM R + P+
Sbjct: 526 SQLHNEMVSRGLKPS 540
>ref|XP_002305195.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222848159|gb|EEE85706.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 556
Score = 320 bits (820), Expect = 6e-85
Identities = 157/275 (57%), Positives = 205/275 (74%)
Frame = +1
Query: 1 IVNTCLVYDMIENQRIEEGLVLLKWMLQKNMILDTISYSLVVFAKVKMGKSDSAKEIYEE 180
IVNTCLV+ ++E R+E GL LLK ML+KNMILDT++YSL+V+AKVK+G +SA ++YEE
Sbjct: 269 IVNTCLVFRILEEGRVEPGLALLKMMLRKNMILDTVAYSLIVYAKVKLGNLNSAMQVYEE 328
Query: 181 MLKRGFKENAFVCNLFVGAYCEEGRIDEAIGLLEEMASLGFKPSDETFNQLIKGCSLDGR 360
MLKRGF N+FV F+GAYC+E RI+EA LL+EM ++G KP +TFN L++GC+ GR
Sbjct: 329 MLKRGFNANSFVYTSFIGAYCKEERIEEANQLLQEMENMGLKPYGDTFNFLLEGCAKAGR 388
Query: 361 SEDSLAFCKQMMSMGLLPSCSSVNEMFGKLCENGKTKEADETLTILLDKGFTPDENTYSH 540
E++L++CK+MM MG +PS S+ NEM GKLC A+E LT LLD+GF DE TYS+
Sbjct: 389 VEETLSYCKKMMEMGHVPSLSAFNEMVGKLCRIEDVTRANEMLTNLLDEGFLADEITYSN 448
Query: 541 LISGYGKDDNMEGLTKLLFEMEYRSIYPNMFGFTSVIISLCKCGRLEEAEKYLKTMKARS 720
LISGY K++ ++ + KL +EMEYRS+ P + GFTS+I LC CG+LEEAEKYL+ M RS
Sbjct: 449 LISGYAKNNQIQEMLKLYYEMEYRSLSPGLMGFTSLIKGLCNCGKLEEAEKYLRIMIGRS 508
Query: 721 FIPSPNIYERLIAGHLEKGSKTRACQLYNEMVGTG 825
P ++YE LI + EKG K RA LYNEMV G
Sbjct: 509 LNPREDVYEALIKVYFEKGDKRRALNLYNEMVSKG 543
Score = 90.9 bits (224), Expect = 7e-16
Identities = 65/280 (23%), Positives = 121/280 (43%), Gaps = 5/280 (1%)
Frame = +1
Query: 1 IVNTCLVYDMI-----ENQRIEEGLVLLKWMLQKNMILDTISYSLVVFAKVKMGKSDSAK 165
I+++ LV+D++ + + E G + + + L IS++ ++ K KS A
Sbjct: 159 IISSPLVFDLLVQAYAKQRMFEIGFDVCCRLEEHRFTLSLISFNTLIHVVQKSDKSPLAW 218
Query: 166 EIYEEMLKRGFKENAFVCNLFVGAYCEEGRIDEAIGLLEEMASLGFKPSDETFNQLIKGC 345
+IYE ML R N + A C+EG++ + +L+++ P L+
Sbjct: 219 KIYEHMLHRRTYPNEATIESMISALCKEGKLQTIVNMLDKIHGKRCSPVVIVNTCLVFRI 278
Query: 346 SLDGRSEDSLAFCKQMMSMGLLPSCSSVNEMFGKLCENGKTKEADETLTILLDKGFTPDE 525
+GR E LA K M+ ++ + + + + G A + +L +GF +
Sbjct: 279 LEEGRVEPGLALLKMMLRKNMILDTVAYSLIVYAKVKLGNLNSAMQVYEEMLKRGFNANS 338
Query: 526 NTYSHLISGYGKDDNMEGLTKLLFEMEYRSIYPNMFGFTSVIISLCKCGRLEEAEKYLKT 705
Y+ I Y K++ +E +LL EME + P F ++ K GR+EE Y K
Sbjct: 339 FVYTSFIGAYCKEERIEEANQLLQEMENMGLKPYGDTFNFLLEGCAKAGRVEETLSYCKK 398
Query: 706 MKARSFIPSPNIYERLIAGHLEKGSKTRACQLYNEMVGTG 825
M +PS + + ++ TRA ++ ++ G
Sbjct: 399 MMEMGHVPSLSAFNEMVGKLCRIEDVTRANEMLTNLLDEG 438
>emb|CAN82481.1| hypothetical protein VITISV_012747 [Vitis vinifera]
Length = 642
Score = 320 bits (819), Expect = 7e-85
Identities = 157/272 (57%), Positives = 204/272 (75%)
Frame = +1
Query: 1 IVNTCLVYDMIENQRIEEGLVLLKWMLQKNMILDTISYSLVVFAKVKMGKSDSAKEIYEE 180
IVNTC+++ M+E R+E+G+++LK +LQKNMILDTISYSL+ +AKVK G DSA E+YEE
Sbjct: 262 IVNTCMIFRMLEEGRVEQGMLILKRLLQKNMILDTISYSLIAYAKVKYGTLDSAWEVYEE 321
Query: 181 MLKRGFKENAFVCNLFVGAYCEEGRIDEAIGLLEEMASLGFKPSDETFNQLIKGCSLDGR 360
ML RGF NAFV LF+G++C EGRI+EA L+++M + G P DETFN LI GCS GR
Sbjct: 322 MLNRGFHPNAFVYTLFIGSHCVEGRIEEANELMQDMENAGLMPYDETFNLLIAGCSKAGR 381
Query: 361 SEDSLAFCKQMMSMGLLPSCSSVNEMFGKLCENGKTKEADETLTILLDKGFTPDENTYSH 540
E+ L C++MM GL+PSC + N M GKLCE+G K ADE LT+LLDKGF PDE TYS+
Sbjct: 382 LEEGLRLCERMMQRGLVPSCWAFNLMAGKLCESGVVKRADEMLTLLLDKGFVPDEITYSN 441
Query: 541 LISGYGKDDNMEGLTKLLFEMEYRSIYPNMFGFTSVIISLCKCGRLEEAEKYLKTMKARS 720
LI+ YGK ++ + KL +EMEYRS+ P + F S+I SLC+C +LE+AEKYL+ MK RS
Sbjct: 442 LIASYGKLGEIQQVLKLYYEMEYRSLSPGLLVFESIIRSLCQCRKLEKAEKYLRIMKDRS 501
Query: 721 FIPSPNIYERLIAGHLEKGSKTRACQLYNEMV 816
S +YE LI+G+ EKG + RA QL+NEM+
Sbjct: 502 IAISTCVYETLISGYFEKGDELRASQLHNEML 533
Score = 68.9 bits (167), Expect = 3e-09
Identities = 56/244 (22%), Positives = 106/244 (43%), Gaps = 1/244 (0%)
Frame = +1
Query: 97 LDTISYSLVVFAKVKMGKSDSAKEIYEEMLKRGFKENAFVCNLFVGAYCEEGRIDEAIGL 276
L IS++ ++ K +IYE M++ N ++ + A C+EG + + + +
Sbjct: 189 LSLISFNXLLHVVQKSDNYPLVWKIYEHMIRVRKYPNEVSVSVMISALCKEGALQKFVDM 248
Query: 277 LEEMASLGFKPSDETFNQLIKGCSLDGRSEDSLAFCKQMMSMGLLPSCSSVNEMFGKLCE 456
L+ + P +I +GR E + K+++ ++ S + + +
Sbjct: 249 LDRIHGKRCSPIVIVNTCMIFRMLEEGRVEQGMLILKRLLQKNMILDTISYSLIAYAKVK 308
Query: 457 NGKTKEADETLTILLDKGFTPDENTYSHLISGYGKDDNMEGLTKLLFEMEYRSIYPNMFG 636
G A E +L++GF P+ Y+ I + + +E +L+ +ME + P
Sbjct: 309 YGTLDSAWEVYEEMLNRGFHPNAFVYTLFIGSHCVEGRIEEANELMQDMENAGLMPYDET 368
Query: 637 FTSVIISLCKCGRLEEAEKYLKTMKARSFIPSPNIYERLIAGHL-EKGSKTRACQLYNEM 813
F +I K GRLEE + + M R +PS + L+AG L E G RA ++ +
Sbjct: 369 FNLLIAGCSKAGRLEEGLRLCERMMQRGLVPSCWAF-NLMAGKLCESGVVKRADEMLTLL 427
Query: 814 VGTG 825
+ G
Sbjct: 428 LDKG 431
>ref|XP_002531188.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223529229|gb|EEF31203.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 619
Score = 309 bits (792), Expect = 1e-81
Identities = 146/275 (53%), Positives = 203/275 (73%)
Frame = +1
Query: 1 IVNTCLVYDMIENQRIEEGLVLLKWMLQKNMILDTISYSLVVFAKVKMGKSDSAKEIYEE 180
I+N C+V+ +++ R++ G+ +LK MLQKNMILDT++YSL+VFAKV++G DSA E+YE
Sbjct: 270 IINACMVFRILQEGRVDVGIGILKGMLQKNMILDTVAYSLIVFAKVRLGNLDSALEVYEA 329
Query: 181 MLKRGFKENAFVCNLFVGAYCEEGRIDEAIGLLEEMASLGFKPSDETFNQLIKGCSLDGR 360
MLKRGF N+FV + +GAYC G+I++A L EM ++G +P DETFN LI+GC+ GR
Sbjct: 330 MLKRGFNANSFVHTVLIGAYCNGGKIEKANQLFGEMGTMGLEPYDETFNFLIEGCAKAGR 389
Query: 361 SEDSLAFCKQMMSMGLLPSCSSVNEMFGKLCENGKTKEADETLTILLDKGFTPDENTYSH 540
E+ L++ ++M+ GL+PS + N+M KLCE G+ +A+ LT LLDKGF+PDE TYS+
Sbjct: 390 VEECLSYFEKMIERGLVPSLLAFNKMIAKLCETGEVNQANTFLTRLLDKGFSPDETTYSY 449
Query: 541 LISGYGKDDNMEGLTKLLFEMEYRSIYPNMFGFTSVIISLCKCGRLEEAEKYLKTMKARS 720
L++GY +D+ ++ + KL +EMEYR + P + FT +I SLC CG+LE+AEKYL+ MK RS
Sbjct: 450 LMTGYERDNQIQEVLKLYYEMEYRPLSPGLLVFTPLIRSLCHCGKLEQAEKYLRIMKGRS 509
Query: 721 FIPSPNIYERLIAGHLEKGSKTRACQLYNEMVGTG 825
PS +YE LIAGHLEK RA QLYNEM+ G
Sbjct: 510 LNPSQQVYEALIAGHLEKSDTARALQLYNEMISKG 544
Score = 73.9 bits (180), Expect = 9e-11
Identities = 46/207 (22%), Positives = 90/207 (43%)
Frame = +1
Query: 4 VNTCLVYDMIENQRIEEGLVLLKWMLQKNMILDTISYSLVVFAKVKMGKSDSAKEIYEEM 183
V+T L+ +IE+ L M + +++ ++ K G+ + +E+M
Sbjct: 341 VHTVLIGAYCNGGKIEKANQLFGEMGTMGLEPYDETFNFLIEGCAKAGRVEECLSYFEKM 400
Query: 184 LKRGFKENAFVCNLFVGAYCEEGRIDEAIGLLEEMASLGFKPSDETFNQLIKGCSLDGRS 363
++RG + N + CE G +++A L + GF P + T++ L+ G D +
Sbjct: 401 IERGLVPSLLAFNKMIAKLCETGEVNQANTFLTRLLDKGFSPDETTYSYLMTGYERDNQI 460
Query: 364 EDSLAFCKQMMSMGLLPSCSSVNEMFGKLCENGKTKEADETLTILLDKGFTPDENTYSHL 543
++ L +M L P + LC GK ++A++ L I+ + P + Y L
Sbjct: 461 QEVLKLYYEMEYRPLSPGLLVFTPLIRSLCHCGKLEQAEKYLRIMKGRSLNPSQQVYEAL 520
Query: 544 ISGYGKDDNMEGLTKLLFEMEYRSIYP 624
I+G+ + + +L EM + P
Sbjct: 521 IAGHLEKSDTARALQLYNEMISKGFTP 547
Score = 73.2 bits (178), Expect = 2e-10
Identities = 59/291 (20%), Positives = 119/291 (40%), Gaps = 10/291 (3%)
Frame = +1
Query: 1 IVNTCLVYDMIEN-----QRIEEGLVLLKWMLQKNMILDTISYSLVVFAKVKMGKSDSAK 165
IV++ LV++++ + E G + ++ + L +S++ ++ K +
Sbjct: 160 IVSSPLVFNLLVQAYAKLRLFEIGFKICFYLEEHGFFLSLLSFNTLIHVVQKSDQYPLVW 219
Query: 166 EIYEEMLKRGFKENAFVCNLFVGAYCEEGRIDEAIGLLEEMASLGFKPSDETFNQLIKGC 345
+IYE M+ + N + A C+EG++ + +L+ + +P +I C
Sbjct: 220 KIYEHMIHKRIYPNEATIRTMINALCKEGKLQMFVDILDRIHGKRCRPL-----VIINAC 274
Query: 346 SL-----DGRSEDSLAFCKQMMSMGLLPSCSSVNEMFGKLCENGKTKEADETLTILLDKG 510
+ +GR + + K M+ ++ + + + G A E +L +G
Sbjct: 275 MVFRILQEGRVDVGIGILKGMLQKNMILDTVAYSLIVFAKVRLGNLDSALEVYEAMLKRG 334
Query: 511 FTPDENTYSHLISGYGKDDNMEGLTKLLFEMEYRSIYPNMFGFTSVIISLCKCGRLEEAE 690
F + ++ LI Y +E +L EM + P F +I K GR+EE
Sbjct: 335 FNANSFVHTVLIGAYCNGGKIEKANQLFGEMGTMGLEPYDETFNFLIEGCAKAGRVEECL 394
Query: 691 KYLKTMKARSFIPSPNIYERLIAGHLEKGSKTRACQLYNEMVGTGSNTGQT 843
Y + M R +PS + ++IA E G +A ++ G + +T
Sbjct: 395 SYFEKMIERGLVPSLLAFNKMIAKLCETGEVNQANTFLTRLLDKGFSPDET 445
>gb|EOY14228.1| Pentatricopeptide repeat (PPR) superfamily protein, putative isoform
4 [Theobroma cacao]
Length = 569
Score = 303 bits (775), Expect = 9e-80
Identities = 152/275 (55%), Positives = 202/275 (73%)
Frame = +1
Query: 1 IVNTCLVYDMIENQRIEEGLVLLKWMLQKNMILDTISYSLVVFAKVKMGKSDSAKEIYEE 180
IVNT LV+ +IE RIE+G+ LLK MLQKN+ILD+I+YS VV K+K+G + A E++EE
Sbjct: 269 IVNTHLVFKVIEEGRIEDGMELLKRMLQKNLILDSIAYSFVVHTKLKLGNLELAWEVHEE 328
Query: 181 MLKRGFKENAFVCNLFVGAYCEEGRIDEAIGLLEEMASLGFKPSDETFNQLIKGCSLDGR 360
MLKRGF N+F+ + F+ AY E GRI EA +L EM ++G KP DETFN LI+GC+ G
Sbjct: 329 MLKRGFIANSFLFSSFIRAYSESGRIHEAENVLREMENMGLKPYDETFNYLIEGCAKAGE 388
Query: 361 SEDSLAFCKQMMSMGLLPSCSSVNEMFGKLCENGKTKEADETLTILLDKGFTPDENTYSH 540
+ S+ C++M+ GL+PSCS+ NEM LCE G ++ A+ LT++LDKGF P+E TYSH
Sbjct: 389 MKASVRHCEEMIRRGLVPSCSTFNEMVRGLCEIGDSENANALLTLVLDKGFLPNETTYSH 448
Query: 541 LISGYGKDDNMEGLTKLLFEMEYRSIYPNMFGFTSVIISLCKCGRLEEAEKYLKTMKARS 720
LI+GYGK+ N++ + KL +EMEY+S+ P + FTS+I LC CG+LEEAE+YL+ MK RS
Sbjct: 449 LIAGYGKEGNIQQVFKLYYEMEYKSLSPGLPVFTSLIRCLCHCGKLEEAERYLRIMKDRS 508
Query: 721 FIPSPNIYERLIAGHLEKGSKTRACQLYNEMVGTG 825
+ S +IYE LI GH EKG KT A +YNEMV G
Sbjct: 509 VVLSEDIYEALITGHFEKGDKTGAGIIYNEMVARG 543
Score = 89.4 bits (220), Expect = 2e-15
Identities = 67/309 (21%), Positives = 132/309 (42%), Gaps = 40/309 (12%)
Frame = +1
Query: 7 NTCLVYDMIEN-----QRIEEGLVLLKWMLQKNMILDTISYSLVVFAKVKMGKSDSAKEI 171
++ LV+D++ + +E+ + ++ L +S++ ++ +K G++ ++
Sbjct: 161 SSTLVFDLLVQAYAKLRMLEDAFEVCCYLENHGFSLTLLSFNALLHGILKSGENVMVWKV 220
Query: 172 YEEMLKRGFKENAFVCNLFVGAYCEEGRIDEAIGLLEEMASLGFKPSDETFNQLIKGCSL 351
YE M+++ N + A C+EG++ + LL+++ P L+
Sbjct: 221 YEHMIEKRKYPNEITIRTMISALCKEGKLQVVVDLLDKILGKRCSPIVIVNTHLVFKVIE 280
Query: 352 DGRSEDSLAFCKQM-------------------MSMGLLPSCSSVNEMFGK--------- 447
+GR ED + K+M + +G L V+E K
Sbjct: 281 EGRIEDGMELLKRMLQKNLILDSIAYSFVVHTKLKLGNLELAWEVHEEMLKRGFIANSFL 340
Query: 448 -------LCENGKTKEADETLTILLDKGFTPDENTYSHLISGYGKDDNMEGLTKLLFEME 606
E+G+ EA+ L + + G P + T+++LI G K M+ + EM
Sbjct: 341 FSSFIRAYSESGRIHEAENVLREMENMGLKPYDETFNYLIEGCAKAGEMKASVRHCEEMI 400
Query: 607 YRSIYPNMFGFTSVIISLCKCGRLEEAEKYLKTMKARSFIPSPNIYERLIAGHLEKGSKT 786
R + P+ F ++ LC+ G E A L + + F+P+ Y LIAG+ ++G+
Sbjct: 401 RRGLVPSCSTFNEMVRGLCEIGDSENANALLTLVLDKGFLPNETTYSHLIAGYGKEGNIQ 460
Query: 787 RACQLYNEM 813
+ +LY EM
Sbjct: 461 QVFKLYYEM 469
Score = 60.8 bits (146), Expect = 8e-07
Identities = 52/239 (21%), Positives = 103/239 (43%), Gaps = 3/239 (1%)
Frame = +1
Query: 118 LVVFAKVKMGKSDSAKEIYEEMLKRGFK---ENAFVCNLFVGAYCEEGRIDEAIGLLEEM 288
+++ + +K DS + E L + + V +L V AY + +++A + +
Sbjct: 130 ILLHSALKTSAPDSTRSCILESLLGSYNVVGSSTLVFDLLVQAYAKLRMLEDAFEVCCYL 189
Query: 289 ASLGFKPSDETFNQLIKGCSLDGRSEDSLAFCKQMMSMGLLPSCSSVNEMFGKLCENGKT 468
+ GF + +FN L+ G G + + M+ P+ ++ M LC+ GK
Sbjct: 190 ENHGFSLTLLSFNALLHGILKSGENVMVWKVYEHMIEKRKYPNEITIRTMISALCKEGKL 249
Query: 469 KEADETLTILLDKGFTPDENTYSHLISGYGKDDNMEGLTKLLFEMEYRSIYPNMFGFTSV 648
+ + L +L K +P +HL+ ++ +E +LL M +++ + ++ V
Sbjct: 250 QVVVDLLDKILGKRCSPIVIVNTHLVFKVIEEGRIEDGMELLKRMLQKNLILDSIAYSFV 309
Query: 649 IISLCKCGRLEEAEKYLKTMKARSFIPSPNIYERLIAGHLEKGSKTRACQLYNEMVGTG 825
+ + K G LE A + + M R FI + ++ I + E G A + EM G
Sbjct: 310 VHTKLKLGNLELAWEVHEEMLKRGFIANSFLFSSFIRAYSESGRIHEAENVLREMENMG 368
>gb|EOY14227.1| Pentatricopeptide repeat (PPR) superfamily protein, putative isoform
3 [Theobroma cacao]
Length = 563
Score = 303 bits (775), Expect = 9e-80
Identities = 152/275 (55%), Positives = 202/275 (73%)
Frame = +1
Query: 1 IVNTCLVYDMIENQRIEEGLVLLKWMLQKNMILDTISYSLVVFAKVKMGKSDSAKEIYEE 180
IVNT LV+ +IE RIE+G+ LLK MLQKN+ILD+I+YS VV K+K+G + A E++EE
Sbjct: 269 IVNTHLVFKVIEEGRIEDGMELLKRMLQKNLILDSIAYSFVVHTKLKLGNLELAWEVHEE 328
Query: 181 MLKRGFKENAFVCNLFVGAYCEEGRIDEAIGLLEEMASLGFKPSDETFNQLIKGCSLDGR 360
MLKRGF N+F+ + F+ AY E GRI EA +L EM ++G KP DETFN LI+GC+ G
Sbjct: 329 MLKRGFIANSFLFSSFIRAYSESGRIHEAENVLREMENMGLKPYDETFNYLIEGCAKAGE 388
Query: 361 SEDSLAFCKQMMSMGLLPSCSSVNEMFGKLCENGKTKEADETLTILLDKGFTPDENTYSH 540
+ S+ C++M+ GL+PSCS+ NEM LCE G ++ A+ LT++LDKGF P+E TYSH
Sbjct: 389 MKASVRHCEEMIRRGLVPSCSTFNEMVRGLCEIGDSENANALLTLVLDKGFLPNETTYSH 448
Query: 541 LISGYGKDDNMEGLTKLLFEMEYRSIYPNMFGFTSVIISLCKCGRLEEAEKYLKTMKARS 720
LI+GYGK+ N++ + KL +EMEY+S+ P + FTS+I LC CG+LEEAE+YL+ MK RS
Sbjct: 449 LIAGYGKEGNIQQVFKLYYEMEYKSLSPGLPVFTSLIRCLCHCGKLEEAERYLRIMKDRS 508
Query: 721 FIPSPNIYERLIAGHLEKGSKTRACQLYNEMVGTG 825
+ S +IYE LI GH EKG KT A +YNEMV G
Sbjct: 509 VVLSEDIYEALITGHFEKGDKTGAGIIYNEMVARG 543
Score = 89.4 bits (220), Expect = 2e-15
Identities = 67/309 (21%), Positives = 132/309 (42%), Gaps = 40/309 (12%)
Frame = +1
Query: 7 NTCLVYDMIEN-----QRIEEGLVLLKWMLQKNMILDTISYSLVVFAKVKMGKSDSAKEI 171
++ LV+D++ + +E+ + ++ L +S++ ++ +K G++ ++
Sbjct: 161 SSTLVFDLLVQAYAKLRMLEDAFEVCCYLENHGFSLTLLSFNALLHGILKSGENVMVWKV 220
Query: 172 YEEMLKRGFKENAFVCNLFVGAYCEEGRIDEAIGLLEEMASLGFKPSDETFNQLIKGCSL 351
YE M+++ N + A C+EG++ + LL+++ P L+
Sbjct: 221 YEHMIEKRKYPNEITIRTMISALCKEGKLQVVVDLLDKILGKRCSPIVIVNTHLVFKVIE 280
Query: 352 DGRSEDSLAFCKQM-------------------MSMGLLPSCSSVNEMFGK--------- 447
+GR ED + K+M + +G L V+E K
Sbjct: 281 EGRIEDGMELLKRMLQKNLILDSIAYSFVVHTKLKLGNLELAWEVHEEMLKRGFIANSFL 340
Query: 448 -------LCENGKTKEADETLTILLDKGFTPDENTYSHLISGYGKDDNMEGLTKLLFEME 606
E+G+ EA+ L + + G P + T+++LI G K M+ + EM
Sbjct: 341 FSSFIRAYSESGRIHEAENVLREMENMGLKPYDETFNYLIEGCAKAGEMKASVRHCEEMI 400
Query: 607 YRSIYPNMFGFTSVIISLCKCGRLEEAEKYLKTMKARSFIPSPNIYERLIAGHLEKGSKT 786
R + P+ F ++ LC+ G E A L + + F+P+ Y LIAG+ ++G+
Sbjct: 401 RRGLVPSCSTFNEMVRGLCEIGDSENANALLTLVLDKGFLPNETTYSHLIAGYGKEGNIQ 460
Query: 787 RACQLYNEM 813
+ +LY EM
Sbjct: 461 QVFKLYYEM 469
Score = 60.8 bits (146), Expect = 8e-07
Identities = 52/239 (21%), Positives = 103/239 (43%), Gaps = 3/239 (1%)
Frame = +1
Query: 118 LVVFAKVKMGKSDSAKEIYEEMLKRGFK---ENAFVCNLFVGAYCEEGRIDEAIGLLEEM 288
+++ + +K DS + E L + + V +L V AY + +++A + +
Sbjct: 130 ILLHSALKTSAPDSTRSCILESLLGSYNVVGSSTLVFDLLVQAYAKLRMLEDAFEVCCYL 189
Query: 289 ASLGFKPSDETFNQLIKGCSLDGRSEDSLAFCKQMMSMGLLPSCSSVNEMFGKLCENGKT 468
+ GF + +FN L+ G G + + M+ P+ ++ M LC+ GK
Sbjct: 190 ENHGFSLTLLSFNALLHGILKSGENVMVWKVYEHMIEKRKYPNEITIRTMISALCKEGKL 249
Query: 469 KEADETLTILLDKGFTPDENTYSHLISGYGKDDNMEGLTKLLFEMEYRSIYPNMFGFTSV 648
+ + L +L K +P +HL+ ++ +E +LL M +++ + ++ V
Sbjct: 250 QVVVDLLDKILGKRCSPIVIVNTHLVFKVIEEGRIEDGMELLKRMLQKNLILDSIAYSFV 309
Query: 649 IISLCKCGRLEEAEKYLKTMKARSFIPSPNIYERLIAGHLEKGSKTRACQLYNEMVGTG 825
+ + K G LE A + + M R FI + ++ I + E G A + EM G
Sbjct: 310 VHTKLKLGNLELAWEVHEEMLKRGFIANSFLFSSFIRAYSESGRIHEAENVLREMENMG 368
>gb|EOY14225.1| Pentatricopeptide repeat superfamily protein, putative isoform 1
[Theobroma cacao]
Length = 596
Score = 303 bits (775), Expect = 9e-80
Identities = 152/275 (55%), Positives = 202/275 (73%)
Frame = +1
Query: 1 IVNTCLVYDMIENQRIEEGLVLLKWMLQKNMILDTISYSLVVFAKVKMGKSDSAKEIYEE 180
IVNT LV+ +IE RIE+G+ LLK MLQKN+ILD+I+YS VV K+K+G + A E++EE
Sbjct: 269 IVNTHLVFKVIEEGRIEDGMELLKRMLQKNLILDSIAYSFVVHTKLKLGNLELAWEVHEE 328
Query: 181 MLKRGFKENAFVCNLFVGAYCEEGRIDEAIGLLEEMASLGFKPSDETFNQLIKGCSLDGR 360
MLKRGF N+F+ + F+ AY E GRI EA +L EM ++G KP DETFN LI+GC+ G
Sbjct: 329 MLKRGFIANSFLFSSFIRAYSESGRIHEAENVLREMENMGLKPYDETFNYLIEGCAKAGE 388
Query: 361 SEDSLAFCKQMMSMGLLPSCSSVNEMFGKLCENGKTKEADETLTILLDKGFTPDENTYSH 540
+ S+ C++M+ GL+PSCS+ NEM LCE G ++ A+ LT++LDKGF P+E TYSH
Sbjct: 389 MKASVRHCEEMIRRGLVPSCSTFNEMVRGLCEIGDSENANALLTLVLDKGFLPNETTYSH 448
Query: 541 LISGYGKDDNMEGLTKLLFEMEYRSIYPNMFGFTSVIISLCKCGRLEEAEKYLKTMKARS 720
LI+GYGK+ N++ + KL +EMEY+S+ P + FTS+I LC CG+LEEAE+YL+ MK RS
Sbjct: 449 LIAGYGKEGNIQQVFKLYYEMEYKSLSPGLPVFTSLIRCLCHCGKLEEAERYLRIMKDRS 508
Query: 721 FIPSPNIYERLIAGHLEKGSKTRACQLYNEMVGTG 825
+ S +IYE LI GH EKG KT A +YNEMV G
Sbjct: 509 VVLSEDIYEALITGHFEKGDKTGAGIIYNEMVARG 543
Score = 89.4 bits (220), Expect = 2e-15
Identities = 67/309 (21%), Positives = 132/309 (42%), Gaps = 40/309 (12%)
Frame = +1
Query: 7 NTCLVYDMIEN-----QRIEEGLVLLKWMLQKNMILDTISYSLVVFAKVKMGKSDSAKEI 171
++ LV+D++ + +E+ + ++ L +S++ ++ +K G++ ++
Sbjct: 161 SSTLVFDLLVQAYAKLRMLEDAFEVCCYLENHGFSLTLLSFNALLHGILKSGENVMVWKV 220
Query: 172 YEEMLKRGFKENAFVCNLFVGAYCEEGRIDEAIGLLEEMASLGFKPSDETFNQLIKGCSL 351
YE M+++ N + A C+EG++ + LL+++ P L+
Sbjct: 221 YEHMIEKRKYPNEITIRTMISALCKEGKLQVVVDLLDKILGKRCSPIVIVNTHLVFKVIE 280
Query: 352 DGRSEDSLAFCKQM-------------------MSMGLLPSCSSVNEMFGK--------- 447
+GR ED + K+M + +G L V+E K
Sbjct: 281 EGRIEDGMELLKRMLQKNLILDSIAYSFVVHTKLKLGNLELAWEVHEEMLKRGFIANSFL 340
Query: 448 -------LCENGKTKEADETLTILLDKGFTPDENTYSHLISGYGKDDNMEGLTKLLFEME 606
E+G+ EA+ L + + G P + T+++LI G K M+ + EM
Sbjct: 341 FSSFIRAYSESGRIHEAENVLREMENMGLKPYDETFNYLIEGCAKAGEMKASVRHCEEMI 400
Query: 607 YRSIYPNMFGFTSVIISLCKCGRLEEAEKYLKTMKARSFIPSPNIYERLIAGHLEKGSKT 786
R + P+ F ++ LC+ G E A L + + F+P+ Y LIAG+ ++G+
Sbjct: 401 RRGLVPSCSTFNEMVRGLCEIGDSENANALLTLVLDKGFLPNETTYSHLIAGYGKEGNIQ 460
Query: 787 RACQLYNEM 813
+ +LY EM
Sbjct: 461 QVFKLYYEM 469
Score = 60.8 bits (146), Expect = 8e-07
Identities = 52/239 (21%), Positives = 103/239 (43%), Gaps = 3/239 (1%)
Frame = +1
Query: 118 LVVFAKVKMGKSDSAKEIYEEMLKRGFK---ENAFVCNLFVGAYCEEGRIDEAIGLLEEM 288
+++ + +K DS + E L + + V +L V AY + +++A + +
Sbjct: 130 ILLHSALKTSAPDSTRSCILESLLGSYNVVGSSTLVFDLLVQAYAKLRMLEDAFEVCCYL 189
Query: 289 ASLGFKPSDETFNQLIKGCSLDGRSEDSLAFCKQMMSMGLLPSCSSVNEMFGKLCENGKT 468
+ GF + +FN L+ G G + + M+ P+ ++ M LC+ GK
Sbjct: 190 ENHGFSLTLLSFNALLHGILKSGENVMVWKVYEHMIEKRKYPNEITIRTMISALCKEGKL 249
Query: 469 KEADETLTILLDKGFTPDENTYSHLISGYGKDDNMEGLTKLLFEMEYRSIYPNMFGFTSV 648
+ + L +L K +P +HL+ ++ +E +LL M +++ + ++ V
Sbjct: 250 QVVVDLLDKILGKRCSPIVIVNTHLVFKVIEEGRIEDGMELLKRMLQKNLILDSIAYSFV 309
Query: 649 IISLCKCGRLEEAEKYLKTMKARSFIPSPNIYERLIAGHLEKGSKTRACQLYNEMVGTG 825
+ + K G LE A + + M R FI + ++ I + E G A + EM G
Sbjct: 310 VHTKLKLGNLELAWEVHEEMLKRGFIANSFLFSSFIRAYSESGRIHEAENVLREMENMG 368
>ref|XP_004240257.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
mitochondrial-like [Solanum lycopersicum]
Length = 552
Score = 300 bits (767), Expect = 8e-79
Identities = 153/270 (56%), Positives = 197/270 (72%)
Frame = +1
Query: 1 IVNTCLVYDMIENQRIEEGLVLLKWMLQKNMILDTISYSLVVFAKVKMGKSDSAKEIYEE 180
+VNTCL+Y MIE RIE+GL L++ MLQKNMILDTIS SL+V AKVKM +SA +Y+E
Sbjct: 274 VVNTCLIYGMIEEGRIEDGLRLMRRMLQKNMILDTISCSLIVLAKVKMRDLESAWGVYDE 333
Query: 181 MLKRGFKENAFVCNLFVGAYCEEGRIDEAIGLLEEMASLGFKPSDETFNQLIKGCSLDGR 360
ML+RGF+ NA V + F+GAYCEE RIDEAI L++EM L KP ETFN LIK CS GR
Sbjct: 334 MLRRGFEGNALVYDSFIGAYCEEKRIDEAIKLMDEMECLNMKPFSETFNHLIKVCSEVGR 393
Query: 361 SEDSLAFCKQMMSMGLLPSCSSVNEMFGKLCENGKTKEADETLTILLDKGFTPDENTYSH 540
E+SL C +M+ GLLPSC S N + KL ENG K A++ LT L+DKGF PD++ YS+
Sbjct: 394 LEESLKICDKMIGNGLLPSCLSFNALVAKLSENGSAKCANKLLTTLMDKGFIPDQSIYSY 453
Query: 541 LISGYGKDDNMEGLTKLLFEMEYRSIYPNMFGFTSVIISLCKCGRLEEAEKYLKTMKARS 720
LI GY ++EG KL +EM+YRSI PN F +II+LC+CGRL+EA+++L M +S
Sbjct: 454 LIVGYANVGDVEGALKLYYEMQYRSISPNTSIFDYLIIALCECGRLKEADEFLSLMIGQS 513
Query: 721 FIPSPNIYERLIAGHLEKGSKTRACQLYNE 810
PS ++Y++LIA HLE+G +TRA LY +
Sbjct: 514 LRPSIHVYKKLIARHLERGDETRANHLYRQ 543
Score = 92.0 bits (227), Expect = 3e-16
Identities = 69/291 (23%), Positives = 120/291 (41%), Gaps = 35/291 (12%)
Frame = +1
Query: 46 IEEGLVLLKWMLQKNMILDTISYSLVVFAKVKMGKSDSAKEIYEEMLKRGFKENAFVCNL 225
I++GL + K + +L ISY+ ++ K K+ IYE M+++ N +
Sbjct: 184 IDKGLDVCKLLDGNGFMLSLISYNTLLHVVQKSEKTSMVWGIYEYMIEKRIYPNEMTTRI 243
Query: 226 FVGAYCEEGRIDEAIGLLEEMASLGFKPSDETFNQLIKGCSLDGRSEDSLAFCKQMMSMG 405
+ A C++GR+ + +LE+ +P LI G +GR ED L ++M+
Sbjct: 244 MISALCKQGRLQRFLDVLEKSHGKRCRPGVVVNTCLIYGMIEEGRIEDGLRLMRRMLQKN 303
Query: 406 LL---PSCSSV--------------------------------NEMFGKLCENGKTKEAD 480
++ SCS + + G CE + EA
Sbjct: 304 MILDTISCSLIVLAKVKMRDLESAWGVYDEMLRRGFEGNALVYDSFIGAYCEEKRIDEAI 363
Query: 481 ETLTILLDKGFTPDENTYSHLISGYGKDDNMEGLTKLLFEMEYRSIYPNMFGFTSVIISL 660
+ + + P T++HLI + +E K+ +M + P+ F +++ L
Sbjct: 364 KLMDEMECLNMKPFSETFNHLIKVCSEVGRLEESLKICDKMIGNGLLPSCLSFNALVAKL 423
Query: 661 CKCGRLEEAEKYLKTMKARSFIPSPNIYERLIAGHLEKGSKTRACQLYNEM 813
+ G + A K L T+ + FIP +IY LI G+ G A +LY EM
Sbjct: 424 SENGSAKCANKLLTTLMDKGFIPDQSIYSYLIVGYANVGDVEGALKLYYEM 474
>ref|XP_004301459.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 530
Score = 291 bits (745), Expect = 3e-76
Identities = 147/273 (53%), Positives = 197/273 (72%), Gaps = 1/273 (0%)
Frame = +1
Query: 1 IVNTCLVYDMIENQRIEEGLVLLKWMLQKNMILDTISYSLVVFAKVKMGKSDSAKEIYEE 180
IVNT LV+ ++E R+EEG+VLLK MLQKNM+LDTI+YSL+V+AKVK+ SA+++YEE
Sbjct: 255 IVNTSLVFRILEEGRVEEGMVLLKRMLQKNMVLDTIAYSLIVYAKVKLEDLGSAQQVYEE 314
Query: 181 MLKRGFKENAFVCNLFVGAYCEEGRIDEAIGLLEEMASLGFKPSDETFNQLIKGCSLDGR 360
MLKRGF+ N+FV LF+ A+C+ GRIDEA ++ EM ++ KP DE++N LI+GC+ GR
Sbjct: 315 MLKRGFRANSFVYTLFIEAHCKAGRIDEAQSMMNEMGNMDLKPYDESYNFLIEGCAKAGR 374
Query: 361 SEDSLAFCKQMMSMGLLPSCSSVNEMFGKLCENGKTKEADETLTILLDKGFTPDENTYSH 540
E+S+ + KQMM + +PS + NEM GKLCE G +A+ LTILLDKGF+P+E TYS
Sbjct: 375 VEESVNYMKQMMEIRFIPSLGAFNEMVGKLCEIGDADQANVMLTILLDKGFSPNEITYSL 434
Query: 541 LISGYGKDDNMEGLTKLLFEMEYRSIYPNMFGFTSVIISLCKCGRLEEAEKYLKTMKARS 720
LI GY + + + KL +EME RS+ P M FTS+I S C+CG+ EEA+KY + MK RS
Sbjct: 435 LIDGYARKGKSDEVLKLFYEMESRSLSPGMLVFTSLIKSFCQCGKSEEAKKYFRIMKDRS 494
Query: 721 FIPSPNIYERLIAGHLEKGSKTRA-CQLYNEMV 816
PS + YE +A H E+G+ RA C NEMV
Sbjct: 495 IAPSISTYEIFLANHFEQGNTERADCLSRNEMV 527
Score = 75.1 bits (183), Expect = 4e-11
Identities = 60/309 (19%), Positives = 121/309 (39%), Gaps = 35/309 (11%)
Frame = +1
Query: 16 LVYDMIENQRIEEGLVLLKWMLQKNMILDTISYSLVVFAKVKMGKSDSAKEIYEEMLKRG 195
LV + + E G + ++ ++ + L ISY+ ++ + ++ +IYE M+ R
Sbjct: 155 LVQTYAKMRMFETGFDVCCYLRERGLPLSLISYNTLLRVVERSERNALVWKIYEHMVGRR 214
Query: 196 FKENAFVCNLFVGAYCEEGRIDEAIGLLEEMASLGFKPSDETFNQLIKGCSLDGRSEDSL 375
N + + A C+EG + + +L+ + PS L+ +GR E+ +
Sbjct: 215 SYPNEETVRILIDALCKEGELRKYADMLDRIHGKRCSPSVIVNTSLVFRILEEGRVEEGM 274
Query: 376 AFCKQMMSMGL----------------LPSCSSVNEMFGKL------------------- 450
K+M+ + L S +++ ++
Sbjct: 275 VLLKRMLQKNMVLDTIAYSLIVYAKVKLEDLGSAQQVYEEMLKRGFRANSFVYTLFIEAH 334
Query: 451 CENGKTKEADETLTILLDKGFTPDENTYSHLISGYGKDDNMEGLTKLLFEMEYRSIYPNM 630
C+ G+ EA + + + P + +Y+ LI G K +E + +M P++
Sbjct: 335 CKAGRIDEAQSMMNEMGNMDLKPYDESYNFLIEGCAKAGRVEESVNYMKQMMEIRFIPSL 394
Query: 631 FGFTSVIISLCKCGRLEEAEKYLKTMKARSFIPSPNIYERLIAGHLEKGSKTRACQLYNE 810
F ++ LC+ G ++A L + + F P+ Y LI G+ KG +L+ E
Sbjct: 395 GAFNEMVGKLCEIGDADQANVMLTILLDKGFSPNEITYSLLIDGYARKGKSDEVLKLFYE 454
Query: 811 MVGTGSNTG 837
M + G
Sbjct: 455 MESRSLSPG 463
>ref|XP_004171986.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
mitochondrial-like [Cucumis sativus]
Length = 539
Score = 288 bits (737), Expect = 2e-75
Identities = 139/275 (50%), Positives = 196/275 (71%)
Frame = +1
Query: 1 IVNTCLVYDMIENQRIEEGLVLLKWMLQKNMILDTISYSLVVFAKVKMGKSDSAKEIYEE 180
IVN CL+Y ++E R+E+G+ LLK MLQKNM+LD I+YSL+V+AKVK G S E++EE
Sbjct: 265 IVNACLIYRILEEGRVEDGITLLKRMLQKNMVLDDIAYSLIVYAKVKTGSITSTWEVFEE 324
Query: 181 MLKRGFKENAFVCNLFVGAYCEEGRIDEAIGLLEEMASLGFKPSDETFNQLIKGCSLDGR 360
M +RGF+ N+F+ LF+G +C G+++EA L++EM ++G KP ETFN LI+GC++ G
Sbjct: 325 MSERGFQANSFIYTLFIGVHCRGGKVEEAHCLMQEMENMGLKPYPETFNLLIEGCAISGH 384
Query: 361 SEDSLAFCKQMMSMGLLPSCSSVNEMFGKLCENGKTKEADETLTILLDKGFTPDENTYSH 540
SE+ L+ C++M+ G LPSCS N K+CE G K+A+ LTILLDKGF PDE TY++
Sbjct: 385 SEEILSMCEKMLERGFLPSCSVFNVAIAKICEKGDVKKANALLTILLDKGFLPDETTYTN 444
Query: 541 LISGYGKDDNMEGLTKLLFEMEYRSIYPNMFGFTSVIISLCKCGRLEEAEKYLKTMKARS 720
LI GY K ++ + KL +EM R + P + F ++I SLC+ GRLEEAEKYLK +K S
Sbjct: 445 LIIGYRKSGEIQEILKLYYEMGARLLSPGVSVFFALIGSLCQSGRLEEAEKYLKIVKDSS 504
Query: 721 FIPSPNIYERLIAGHLEKGSKTRACQLYNEMVGTG 825
P +IY+ LI +L+KG++ +A +LYNEM+ G
Sbjct: 505 LTPCLSIYQALILFYLKKGNRAKALELYNEMMFDG 539
Score = 79.7 bits (195), Expect = 2e-12
Identities = 65/301 (21%), Positives = 121/301 (40%), Gaps = 35/301 (11%)
Frame = +1
Query: 16 LVYDMIENQRIEEGLVLLKWMLQKNMILDTISYSLVVFAKVKMGKSDSAKEIYEEMLKRG 195
LV + + I+ L + + ++ L IS++ ++ K ++ +IYE+M+++
Sbjct: 165 LVQTCAKLRLIDFALCVCSHLEERGFSLSLISFNTLIHVVEKSDQNLKVWKIYEQMIRKR 224
Query: 196 FKENAFVCNLFVGAYCEEGRIDEAIGLLEEMASLGFKPSDETFNQLIKGCSLDGRSEDSL 375
NA + + + C+EG++ E +L + S LI +GR ED +
Sbjct: 225 VYPNAITVRIMINSLCKEGKLQETSDMLNRIHGSRCSASLIVNACLIYRILEEGRVEDGI 284
Query: 376 AFCKQMMSMGLL----------------PSCSSVNEMF-------------------GKL 450
K+M+ ++ S +S E+F G
Sbjct: 285 TLLKRMLQKNMVLDDIAYSLIVYAKVKTGSITSTWEVFEEMSERGFQANSFIYTLFIGVH 344
Query: 451 CENGKTKEADETLTILLDKGFTPDENTYSHLISGYGKDDNMEGLTKLLFEMEYRSIYPNM 630
C GK +EA + + + G P T++ LI G + E + + +M R P+
Sbjct: 345 CRGGKVEEAHCLMQEMENMGLKPYPETFNLLIEGCAISGHSEEILSMCEKMLERGFLPSC 404
Query: 631 FGFTSVIISLCKCGRLEEAEKYLKTMKARSFIPSPNIYERLIAGHLEKGSKTRACQLYNE 810
F I +C+ G +++A L + + F+P Y LI G+ + G +LY E
Sbjct: 405 SVFNVAIAKICEKGDVKKANALLTILLDKGFLPDETTYTNLIIGYRKSGEIQEILKLYYE 464
Query: 811 M 813
M
Sbjct: 465 M 465
>ref|XP_004140361.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
mitochondrial-like [Cucumis sativus]
Length = 517
Score = 287 bits (735), Expect = 4e-75
Identities = 139/275 (50%), Positives = 196/275 (71%)
Frame = +1
Query: 1 IVNTCLVYDMIENQRIEEGLVLLKWMLQKNMILDTISYSLVVFAKVKMGKSDSAKEIYEE 180
IVN CL+Y ++E R+E+G+ LLK MLQKNM+LD I+YSL+V+AKVK G S E++EE
Sbjct: 243 IVNACLIYRILEEGRVEDGITLLKRMLQKNMVLDDIAYSLIVYAKVKTGSITSTWEVFEE 302
Query: 181 MLKRGFKENAFVCNLFVGAYCEEGRIDEAIGLLEEMASLGFKPSDETFNQLIKGCSLDGR 360
M +RGF+ N+F+ LF+G +C G+++EA L++EM ++G KP ETFN LI+GC++ G
Sbjct: 303 MSERGFQANSFIYTLFIGVHCRGGKVEEAHCLMQEMENMGLKPYPETFNLLIEGCAISGH 362
Query: 361 SEDSLAFCKQMMSMGLLPSCSSVNEMFGKLCENGKTKEADETLTILLDKGFTPDENTYSH 540
SE+ L+ C++M+ G LPSCS N K+CE G K+A+ LTILLDKGF PDE TY++
Sbjct: 363 SEEILSMCEKMLERGFLPSCSVFNVAIDKICEKGDVKKANALLTILLDKGFLPDETTYTN 422
Query: 541 LISGYGKDDNMEGLTKLLFEMEYRSIYPNMFGFTSVIISLCKCGRLEEAEKYLKTMKARS 720
LI GY K ++ + KL +EM R + P + F ++I SLC+ GRLEEAEKYLK +K S
Sbjct: 423 LIIGYRKSGEIQEILKLYYEMGARLLSPGVSVFFALIGSLCQSGRLEEAEKYLKIVKDSS 482
Query: 721 FIPSPNIYERLIAGHLEKGSKTRACQLYNEMVGTG 825
P +IY+ LI +L+KG++ +A +LYNEM+ G
Sbjct: 483 LTPCLSIYQALILLYLKKGNRAKALELYNEMMFDG 517
Score = 79.0 bits (193), Expect = 3e-12
Identities = 65/301 (21%), Positives = 121/301 (40%), Gaps = 35/301 (11%)
Frame = +1
Query: 16 LVYDMIENQRIEEGLVLLKWMLQKNMILDTISYSLVVFAKVKMGKSDSAKEIYEEMLKRG 195
LV + + I+ L + + ++ L IS++ ++ K ++ +IYE+M+++
Sbjct: 143 LVQTCAKLRLIDFALCVCSHLEERGFSLSLISFNTLIHVVEKSDENLKVWKIYEQMIRKR 202
Query: 196 FKENAFVCNLFVGAYCEEGRIDEAIGLLEEMASLGFKPSDETFNQLIKGCSLDGRSEDSL 375
NA + + + C+EG++ E +L + S LI +GR ED +
Sbjct: 203 VYPNAITVRIMINSLCKEGKLQETSDMLNRIHGSRCSASLIVNACLIYRILEEGRVEDGI 262
Query: 376 AFCKQMMSMGLL----------------PSCSSVNEMF-------------------GKL 450
K+M+ ++ S +S E+F G
Sbjct: 263 TLLKRMLQKNMVLDDIAYSLIVYAKVKTGSITSTWEVFEEMSERGFQANSFIYTLFIGVH 322
Query: 451 CENGKTKEADETLTILLDKGFTPDENTYSHLISGYGKDDNMEGLTKLLFEMEYRSIYPNM 630
C GK +EA + + + G P T++ LI G + E + + +M R P+
Sbjct: 323 CRGGKVEEAHCLMQEMENMGLKPYPETFNLLIEGCAISGHSEEILSMCEKMLERGFLPSC 382
Query: 631 FGFTSVIISLCKCGRLEEAEKYLKTMKARSFIPSPNIYERLIAGHLEKGSKTRACQLYNE 810
F I +C+ G +++A L + + F+P Y LI G+ + G +LY E
Sbjct: 383 SVFNVAIDKICEKGDVKKANALLTILLDKGFLPDETTYTNLIIGYRKSGEIQEILKLYYE 442
Query: 811 M 813
M
Sbjct: 443 M 443
>gb|EMJ15730.1| hypothetical protein PRUPE_ppa014874mg, partial [Prunus persica]
Length = 499
Score = 281 bits (720), Expect = 2e-73
Identities = 136/243 (55%), Positives = 181/243 (74%)
Frame = +1
Query: 1 IVNTCLVYDMIENQRIEEGLVLLKWMLQKNMILDTISYSLVVFAKVKMGKSDSAKEIYEE 180
IVNT LV+ ++E R+EEGL+LL+ MLQKNM+LDTI+YSL+V+AKVK+G SA E+YEE
Sbjct: 257 IVNTSLVFSILEGGRVEEGLMLLRRMLQKNMVLDTIAYSLIVYAKVKLGDVCSAWEVYEE 316
Query: 181 MLKRGFKENAFVCNLFVGAYCEEGRIDEAIGLLEEMASLGFKPSDETFNQLIKGCSLDGR 360
MLKRGF+ N+FV LF+GA+CEEGR++EA G++ EM ++ KP DE++N LI+GC+ GR
Sbjct: 317 MLKRGFRANSFVYTLFMGAHCEEGRMEEAQGMMNEMENMDLKPFDESYNLLIEGCAKAGR 376
Query: 361 SEDSLAFCKQMMSMGLLPSCSSVNEMFGKLCENGKTKEADETLTILLDKGFTPDENTYSH 540
E SL++ K+M+ G +P S+ NEM GKLCE G ++A+ TILLDKGF PD TY H
Sbjct: 377 VEASLSYLKKMVESGFIPCRSAFNEMVGKLCETGDAEQANTMFTILLDKGFLPDSTTYGH 436
Query: 541 LISGYGKDDNMEGLTKLLFEMEYRSIYPNMFGFTSVIISLCKCGRLEEAEKYLKTMKARS 720
LI GYG+ ++ + KL +EME RS+ P FTSVI S C+CG++EEAE+Y MK RS
Sbjct: 437 LIDGYGRKGEIQEVVKLYYEMESRSLSPGALVFTSVIKSFCQCGKVEEAERYFGIMKDRS 496
Query: 721 FIP 729
P
Sbjct: 497 IAP 499
>ref|XP_004486552.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
mitochondrial-like [Cicer arietinum]
gi|502183720|ref|XP_004517198.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g66345,
mitochondrial-like [Cicer arietinum]
Length = 551
Score = 273 bits (698), Expect = 8e-71
Identities = 135/285 (47%), Positives = 197/285 (69%), Gaps = 9/285 (3%)
Frame = +1
Query: 1 IVNTCLVYDMIENQRIEEG---------LVLLKWMLQKNMILDTISYSLVVFAKVKMGKS 153
IVN L+ M+E +EE + LLK +LQKN+I D+++YSL+V K+++G
Sbjct: 264 IVNLSLILRMLEKGNVEEEDVDNELVKLVTLLKRLLQKNLIGDSVAYSLIVHVKIRLGNL 323
Query: 154 DSAKEIYEEMLKRGFKENAFVCNLFVGAYCEEGRIDEAIGLLEEMASLGFKPSDETFNQL 333
DSA EIYEEM++RGF EN+FV F+ +C +GRID+AI L++EM + G +P ETF +
Sbjct: 324 DSALEIYEEMVRRGFNENSFVHTSFIRVFCGKGRIDKAIELMKEMEAKGLRPYGETFECV 383
Query: 334 IKGCSLDGRSEDSLAFCKQMMSMGLLPSCSSVNEMFGKLCENGKTKEADETLTILLDKGF 513
I GC+ GR +D ++ ++M+ G +PSCSS ++M KLCENG ++A++ LT+LLDKGF
Sbjct: 384 IVGCADSGRLKDCSSYFEEMLCAGFVPSCSSFDKMVAKLCENGDVEKANDFLTVLLDKGF 443
Query: 514 TPDENTYSHLISGYGKDDNMEGLTKLLFEMEYRSIYPNMFGFTSVIISLCKCGRLEEAEK 693
P + TYSHLI GY D ++ + K+ +EMEY+S+ P + ++S+I LC+ G+LE++EK
Sbjct: 444 LPSDETYSHLIYGYAIKDEVQEVLKIYYEMEYKSMCPGLSVYSSMIKCLCRFGKLEDSEK 503
Query: 694 YLKTMKARSFIPSPNIYERLIAGHLEKGSKTRACQLYNEMVGTGS 828
YL+ MK RS +P+ NIYE LIA H++KG+ RA QL NEM S
Sbjct: 504 YLRIMKGRSLVPNVNIYETLIACHVQKGNNDRALQLRNEMASLES 548
>ref|XP_002887023.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297332864|gb|EFH63282.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 539
Score = 260 bits (664), Expect = 7e-67
Identities = 128/272 (47%), Positives = 180/272 (66%)
Frame = +1
Query: 1 IVNTCLVYDMIENQRIEEGLVLLKWMLQKNMILDTISYSLVVFAKVKMGKSDSAKEIYEE 180
IVNT LV+ ++E +R+EE + LLK +L KNM++D I YS+VV+AK K G + A+ +++E
Sbjct: 264 IVNTSLVFRVLEEKRVEESMSLLKRLLMKNMVVDVIGYSIVVYAKTKKGDLECARNVFDE 323
Query: 181 MLKRGFKENAFVCNLFVGAYCEEGRIDEAIGLLEEMASLGFKPSDETFNQLIKGCSLDGR 360
M++RGF NAFV FV CE G ++EA L+ EM G P +ETFN LI GC+ GR
Sbjct: 324 MIRRGFSANAFVYTAFVRVCCERGDVEEAERLMSEMEDSGVNPYEETFNFLIVGCARFGR 383
Query: 361 SEDSLAFCKQMMSMGLLPSCSSVNEMFGKLCENGKTKEADETLTILLDKGFTPDENTYSH 540
E L +C+ M++ GL+PSCS+ N M +L E A+E LT +DKGF PDE+TYSH
Sbjct: 384 EEKGLEYCEIMVARGLMPSCSAFNGMVKRLSEIDNVNRANEILTKSIDKGFVPDEHTYSH 443
Query: 541 LISGYGKDDNMEGLTKLLFEMEYRSIYPNMFGFTSVIISLCKCGRLEEAEKYLKTMKARS 720
LI G+ + ++++ KL +EMEYR I P F S+I+ LC CG++E EKYL+ MK R
Sbjct: 444 LIRGFVEGNSIDQALKLFYEMEYRKISPGFEVFRSLIVGLCACGKVEAGEKYLRIMKRRL 503
Query: 721 FIPSPNIYERLIAGHLEKGSKTRACQLYNEMV 816
P+ +IYE +I + G KT A ++YNEM+
Sbjct: 504 IEPNADIYEAMINAFQKIGDKTNADKVYNEMI 535
Score = 75.5 bits (184), Expect = 3e-11
Identities = 64/309 (20%), Positives = 122/309 (39%), Gaps = 40/309 (12%)
Frame = +1
Query: 7 NTCLVYDMIEN-----QRIEEGLVLLKWMLQKNMILDTISYSLVVFAKVKMGKSDSAKEI 171
+T LV+D++ + +E G + K + L I+ + ++ K + D I
Sbjct: 156 STPLVFDLLVQCYAKIRYLELGFEVFKRLCDCGFSLSVITLNTLIHFAAKSNRVDLVWRI 215
Query: 172 YEEMLKRGFKENAFVCNLFVGAYCEEGRIDEAIGLLEEMASLGFKPSDETFNQLIKGCSL 351
YE + + N + + C+EGR+ E + LL+ + PS L+
Sbjct: 216 YEFAIDKRIYPNETTIRIMISVLCKEGRLKEVVDLLDRIYGKRCLPSVIVNTSLVFRVLE 275
Query: 352 DGRSEDSLAFCKQMMSMGLLPSC--------------------SSVNEMFGK-------- 447
+ R E+S++ K+++ ++ + +EM +
Sbjct: 276 EKRVEESMSLLKRLLMKNMVVDVIGYSIVVYAKTKKGDLECARNVFDEMIRRGFSANAFV 335
Query: 448 -------LCENGKTKEADETLTILLDKGFTPDENTYSHLISGYGKDDNMEGLTKLLFEME 606
CE G +EA+ ++ + D G P E T++ LI G + E + M
Sbjct: 336 YTAFVRVCCERGDVEEAERLMSEMEDSGVNPYEETFNFLIVGCARFGREEKGLEYCEIMV 395
Query: 607 YRSIYPNMFGFTSVIISLCKCGRLEEAEKYLKTMKARSFIPSPNIYERLIAGHLEKGSKT 786
R + P+ F ++ L + + A + L + F+P + Y LI G +E S
Sbjct: 396 ARGLMPSCSAFNGMVKRLSEIDNVNRANEILTKSIDKGFVPDEHTYSHLIRGFVEGNSID 455
Query: 787 RACQLYNEM 813
+A +L+ EM
Sbjct: 456 QALKLFYEM 464
>gb|EOY14226.1| Pentatricopeptide repeat superfamily protein, putative isoform 2
[Theobroma cacao]
Length = 549
Score = 257 bits (656), Expect = 6e-66
Identities = 132/262 (50%), Positives = 185/262 (70%)
Frame = +1
Query: 1 IVNTCLVYDMIENQRIEEGLVLLKWMLQKNMILDTISYSLVVFAKVKMGKSDSAKEIYEE 180
IVNT LV+ +IE RIE+G+ LLK MLQKN+ILD+I+YS VV K+K+G + A E++EE
Sbjct: 269 IVNTHLVFKVIEEGRIEDGMELLKRMLQKNLILDSIAYSFVVHTKLKLGNLELAWEVHEE 328
Query: 181 MLKRGFKENAFVCNLFVGAYCEEGRIDEAIGLLEEMASLGFKPSDETFNQLIKGCSLDGR 360
MLKRGF N+F+ + F+ AY E GRI EA +L EM ++G KP DETFN LI+GC+ G
Sbjct: 329 MLKRGFIANSFLFSSFIRAYSESGRIHEAENVLREMENMGLKPYDETFNYLIEGCAKAGE 388
Query: 361 SEDSLAFCKQMMSMGLLPSCSSVNEMFGKLCENGKTKEADETLTILLDKGFTPDENTYSH 540
+ S+ C++M+ GL+PSCS+ NEM LCE G ++ A+ LT++LDKGF P+E TYSH
Sbjct: 389 MKASVRHCEEMIRRGLVPSCSTFNEMVRGLCEIGDSENANALLTLVLDKGFLPNETTYSH 448
Query: 541 LISGYGKDDNMEGLTKLLFEMEYRSIYPNMFGFTSVIISLCKCGRLEEAEKYLKTMKARS 720
LI+GYGK+ N++ + KL +EMEY+S+ P + FTS+I LC CG+LEEAE+ K R
Sbjct: 449 LIAGYGKEGNIQQVFKLYYEMEYKSLSPGLPVFTSLIRCLCHCGKLEEAERVTKQGLVRD 508
Query: 721 FIPSPNIYERLIAGHLEKGSKT 786
I + + + ++G+ E K+
Sbjct: 509 PI-TQELPDAALSGYCEHTRKS 529
Score = 89.4 bits (220), Expect = 2e-15
Identities = 67/309 (21%), Positives = 132/309 (42%), Gaps = 40/309 (12%)
Frame = +1
Query: 7 NTCLVYDMIEN-----QRIEEGLVLLKWMLQKNMILDTISYSLVVFAKVKMGKSDSAKEI 171
++ LV+D++ + +E+ + ++ L +S++ ++ +K G++ ++
Sbjct: 161 SSTLVFDLLVQAYAKLRMLEDAFEVCCYLENHGFSLTLLSFNALLHGILKSGENVMVWKV 220
Query: 172 YEEMLKRGFKENAFVCNLFVGAYCEEGRIDEAIGLLEEMASLGFKPSDETFNQLIKGCSL 351
YE M+++ N + A C+EG++ + LL+++ P L+
Sbjct: 221 YEHMIEKRKYPNEITIRTMISALCKEGKLQVVVDLLDKILGKRCSPIVIVNTHLVFKVIE 280
Query: 352 DGRSEDSLAFCKQMMS-------------------MGLLPSCSSVNEMFGK--------- 447
+GR ED + K+M+ +G L V+E K
Sbjct: 281 EGRIEDGMELLKRMLQKNLILDSIAYSFVVHTKLKLGNLELAWEVHEEMLKRGFIANSFL 340
Query: 448 -------LCENGKTKEADETLTILLDKGFTPDENTYSHLISGYGKDDNMEGLTKLLFEME 606
E+G+ EA+ L + + G P + T+++LI G K M+ + EM
Sbjct: 341 FSSFIRAYSESGRIHEAENVLREMENMGLKPYDETFNYLIEGCAKAGEMKASVRHCEEMI 400
Query: 607 YRSIYPNMFGFTSVIISLCKCGRLEEAEKYLKTMKARSFIPSPNIYERLIAGHLEKGSKT 786
R + P+ F ++ LC+ G E A L + + F+P+ Y LIAG+ ++G+
Sbjct: 401 RRGLVPSCSTFNEMVRGLCEIGDSENANALLTLVLDKGFLPNETTYSHLIAGYGKEGNIQ 460
Query: 787 RACQLYNEM 813
+ +LY EM
Sbjct: 461 QVFKLYYEM 469
Score = 60.8 bits (146), Expect = 8e-07
Identities = 52/239 (21%), Positives = 103/239 (43%), Gaps = 3/239 (1%)
Frame = +1
Query: 118 LVVFAKVKMGKSDSAKEIYEEMLKRGFK---ENAFVCNLFVGAYCEEGRIDEAIGLLEEM 288
+++ + +K DS + E L + + V +L V AY + +++A + +
Sbjct: 130 ILLHSALKTSAPDSTRSCILESLLGSYNVVGSSTLVFDLLVQAYAKLRMLEDAFEVCCYL 189
Query: 289 ASLGFKPSDETFNQLIKGCSLDGRSEDSLAFCKQMMSMGLLPSCSSVNEMFGKLCENGKT 468
+ GF + +FN L+ G G + + M+ P+ ++ M LC+ GK
Sbjct: 190 ENHGFSLTLLSFNALLHGILKSGENVMVWKVYEHMIEKRKYPNEITIRTMISALCKEGKL 249
Query: 469 KEADETLTILLDKGFTPDENTYSHLISGYGKDDNMEGLTKLLFEMEYRSIYPNMFGFTSV 648
+ + L +L K +P +HL+ ++ +E +LL M +++ + ++ V
Sbjct: 250 QVVVDLLDKILGKRCSPIVIVNTHLVFKVIEEGRIEDGMELLKRMLQKNLILDSIAYSFV 309
Query: 649 IISLCKCGRLEEAEKYLKTMKARSFIPSPNIYERLIAGHLEKGSKTRACQLYNEMVGTG 825
+ + K G LE A + + M R FI + ++ I + E G A + EM G
Sbjct: 310 VHTKLKLGNLELAWEVHEEMLKRGFIANSFLFSSFIRAYSESGRIHEAENVLREMENMG 368
>gb|EOY14229.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
isoform 5 [Theobroma cacao]
Length = 504
Score = 255 bits (652), Expect = 2e-65
Identities = 126/234 (53%), Positives = 174/234 (74%)
Frame = +1
Query: 1 IVNTCLVYDMIENQRIEEGLVLLKWMLQKNMILDTISYSLVVFAKVKMGKSDSAKEIYEE 180
IVNT LV+ +IE RIE+G+ LLK MLQKN+ILD+I+YS VV K+K+G + A E++EE
Sbjct: 269 IVNTHLVFKVIEEGRIEDGMELLKRMLQKNLILDSIAYSFVVHTKLKLGNLELAWEVHEE 328
Query: 181 MLKRGFKENAFVCNLFVGAYCEEGRIDEAIGLLEEMASLGFKPSDETFNQLIKGCSLDGR 360
MLKRGF N+F+ + F+ AY E GRI EA +L EM ++G KP DETFN LI+GC+ G
Sbjct: 329 MLKRGFIANSFLFSSFIRAYSESGRIHEAENVLREMENMGLKPYDETFNYLIEGCAKAGE 388
Query: 361 SEDSLAFCKQMMSMGLLPSCSSVNEMFGKLCENGKTKEADETLTILLDKGFTPDENTYSH 540
+ S+ C++M+ GL+PSCS+ NEM LCE G ++ A+ LT++LDKGF P+E TYSH
Sbjct: 389 MKASVRHCEEMIRRGLVPSCSTFNEMVRGLCEIGDSENANALLTLVLDKGFLPNETTYSH 448
Query: 541 LISGYGKDDNMEGLTKLLFEMEYRSIYPNMFGFTSVIISLCKCGRLEEAEKYLK 702
LI+GYGK+ N++ + KL +EMEY+S+ P + FTS+I LC CG+LEEAE+ ++
Sbjct: 449 LIAGYGKEGNIQQVFKLYYEMEYKSLSPGLPVFTSLIRCLCHCGKLEEAERVMQ 502
Score = 89.4 bits (220), Expect = 2e-15
Identities = 67/309 (21%), Positives = 132/309 (42%), Gaps = 40/309 (12%)
Frame = +1
Query: 7 NTCLVYDMIEN-----QRIEEGLVLLKWMLQKNMILDTISYSLVVFAKVKMGKSDSAKEI 171
++ LV+D++ + +E+ + ++ L +S++ ++ +K G++ ++
Sbjct: 161 SSTLVFDLLVQAYAKLRMLEDAFEVCCYLENHGFSLTLLSFNALLHGILKSGENVMVWKV 220
Query: 172 YEEMLKRGFKENAFVCNLFVGAYCEEGRIDEAIGLLEEMASLGFKPSDETFNQLIKGCSL 351
YE M+++ N + A C+EG++ + LL+++ P L+
Sbjct: 221 YEHMIEKRKYPNEITIRTMISALCKEGKLQVVVDLLDKILGKRCSPIVIVNTHLVFKVIE 280
Query: 352 DGRSEDSLAFCKQMMS-------------------MGLLPSCSSVNEMFGK--------- 447
+GR ED + K+M+ +G L V+E K
Sbjct: 281 EGRIEDGMELLKRMLQKNLILDSIAYSFVVHTKLKLGNLELAWEVHEEMLKRGFIANSFL 340
Query: 448 -------LCENGKTKEADETLTILLDKGFTPDENTYSHLISGYGKDDNMEGLTKLLFEME 606
E+G+ EA+ L + + G P + T+++LI G K M+ + EM
Sbjct: 341 FSSFIRAYSESGRIHEAENVLREMENMGLKPYDETFNYLIEGCAKAGEMKASVRHCEEMI 400
Query: 607 YRSIYPNMFGFTSVIISLCKCGRLEEAEKYLKTMKARSFIPSPNIYERLIAGHLEKGSKT 786
R + P+ F ++ LC+ G E A L + + F+P+ Y LIAG+ ++G+
Sbjct: 401 RRGLVPSCSTFNEMVRGLCEIGDSENANALLTLVLDKGFLPNETTYSHLIAGYGKEGNIQ 460
Query: 787 RACQLYNEM 813
+ +LY EM
Sbjct: 461 QVFKLYYEM 469
Score = 60.8 bits (146), Expect = 8e-07
Identities = 52/239 (21%), Positives = 103/239 (43%), Gaps = 3/239 (1%)
Frame = +1
Query: 118 LVVFAKVKMGKSDSAKEIYEEMLKRGFK---ENAFVCNLFVGAYCEEGRIDEAIGLLEEM 288
+++ + +K DS + E L + + V +L V AY + +++A + +
Sbjct: 130 ILLHSALKTSAPDSTRSCILESLLGSYNVVGSSTLVFDLLVQAYAKLRMLEDAFEVCCYL 189
Query: 289 ASLGFKPSDETFNQLIKGCSLDGRSEDSLAFCKQMMSMGLLPSCSSVNEMFGKLCENGKT 468
+ GF + +FN L+ G G + + M+ P+ ++ M LC+ GK
Sbjct: 190 ENHGFSLTLLSFNALLHGILKSGENVMVWKVYEHMIEKRKYPNEITIRTMISALCKEGKL 249
Query: 469 KEADETLTILLDKGFTPDENTYSHLISGYGKDDNMEGLTKLLFEMEYRSIYPNMFGFTSV 648
+ + L +L K +P +HL+ ++ +E +LL M +++ + ++ V
Sbjct: 250 QVVVDLLDKILGKRCSPIVIVNTHLVFKVIEEGRIEDGMELLKRMLQKNLILDSIAYSFV 309
Query: 649 IISLCKCGRLEEAEKYLKTMKARSFIPSPNIYERLIAGHLEKGSKTRACQLYNEMVGTG 825
+ + K G LE A + + M R FI + ++ I + E G A + EM G
Sbjct: 310 VHTKLKLGNLELAWEVHEEMLKRGFIANSFLFSSFIRAYSESGRIHEAENVLREMENMG 368
>ref|NP_849849.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215314|sp|Q3ECH5.1|PP107_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g66345, mitochondrial; Flags: Precursor
gi|332196377|gb|AEE34498.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 544
Score = 255 bits (651), Expect = 2e-65
Identities = 130/272 (47%), Positives = 180/272 (66%)
Frame = +1
Query: 1 IVNTCLVYDMIENQRIEEGLVLLKWMLQKNMILDTISYSLVVFAKVKMGKSDSAKEIYEE 180
IVNT LV+ ++E RIEE + LLK +L KNM++DTI YS+VV+AK K G SA+++++E
Sbjct: 270 IVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDE 329
Query: 181 MLKRGFKENAFVCNLFVGAYCEEGRIDEAIGLLEEMASLGFKPSDETFNQLIKGCSLDGR 360
ML+RGF N+FV +FV CE+G + EA LL EM G P DETFN LI G + G
Sbjct: 330 MLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGW 389
Query: 361 SEDSLAFCKQMMSMGLLPSCSSVNEMFGKLCENGKTKEADETLTILLDKGFTPDENTYSH 540
E L +C+ M++ GL+PSCS+ NEM + + A+E LT +DKGF PDE+TYSH
Sbjct: 390 EEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSH 449
Query: 541 LISGYGKDDNMEGLTKLLFEMEYRSIYPNMFGFTSVIISLCKCGRLEEAEKYLKTMKARS 720
LI G+ + ++++ KL +EMEYR + P F S+I+ LC CG++E EKYLK MK R
Sbjct: 450 LIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRL 509
Query: 721 FIPSPNIYERLIAGHLEKGSKTRACQLYNEMV 816
P+ +IY+ LI + G KT A ++YNEM+
Sbjct: 510 IEPNADIYDALIKAFQKIGDKTNADRVYNEMI 541
Score = 76.3 bits (186), Expect = 2e-11
Identities = 64/309 (20%), Positives = 124/309 (40%), Gaps = 40/309 (12%)
Frame = +1
Query: 7 NTCLVYDMIEN-----QRIEEGLVLLKWMLQKNMILDTISYSLVVFAKVKMGKSDSAKEI 171
+T LV+D++ + +E G + K + L I+ + ++ K D I
Sbjct: 162 STPLVFDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRI 221
Query: 172 YEEMLKRGFKENAFVCNLFVGAYCEEGRIDEAIGLLEEMASLGFKPSDETFNQLIKGCSL 351
YE + + N + + C+EGR+ E + LL+ + PS L+
Sbjct: 222 YECAIDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLE 281
Query: 352 DGRSEDSLAFCKQMMSMGLL----------------PSCSSVNEMFGKL----------- 450
+ R E+S++ K+++ ++ S ++F ++
Sbjct: 282 EMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFV 341
Query: 451 --------CENGKTKEADETLTILLDKGFTPDENTYSHLISGYGKDDNMEGLTKLLFEME 606
CE G KEA+ L+ + + G +P + T++ LI G+ + E + M
Sbjct: 342 YTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMV 401
Query: 607 YRSIYPNMFGFTSVIISLCKCGRLEEAEKYLKTMKARSFIPSPNIYERLIAGHLEKGSKT 786
R + P+ F ++ S+ K + A + L + F+P + Y LI G +E
Sbjct: 402 TRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDID 461
Query: 787 RACQLYNEM 813
+A +L+ EM
Sbjct: 462 QALKLFYEM 470
>ref|XP_006302104.1| hypothetical protein CARUB_v10020095mg [Capsella rubella]
gi|482570814|gb|EOA35002.1| hypothetical protein
CARUB_v10020095mg [Capsella rubella]
Length = 548
Score = 250 bits (639), Expect = 5e-64
Identities = 128/273 (46%), Positives = 180/273 (65%), Gaps = 1/273 (0%)
Frame = +1
Query: 1 IVNTCLVYDMIENQRIEEGLVLLKWMLQKNMILDTISYSLVVFAKVKMGKSDSAKEIYEE 180
IVNT LV+ ++E+ RIEE + LLK +L KNM++DTI YS+VV+AK K G +SA+ +++E
Sbjct: 267 IVNTSLVFRVLEDNRIEESMSLLKKLLMKNMVVDTIGYSIVVYAKTKEGDLESARNVFDE 326
Query: 181 MLKRGFKENAFVCNLFVGAYCEEGRIDEAIGLLEEMASLGFKPSDETFNQLIKGCSLDGR 360
ML+RGF NAFV FV A CE G ++EA + EM G P ++TFN LI+GC+ G+
Sbjct: 327 MLQRGFSGNAFVYTAFVRACCERGEVEEAERWMSEMEESGINPYEDTFNCLIEGCARFGK 386
Query: 361 SEDSLAFCKQMMSMGLLPSCSSVNEMFGKLCENGKTKEADETLTILLDKGFTPDENTYSH 540
E L +C+ M++ GL+PSCS+ NEM +L + K A+E LT + GF PDE+TYSH
Sbjct: 387 EEKCLEYCEVMVARGLMPSCSAFNEMVKRLSKIENVKHANEILTKSIGNGFIPDEHTYSH 446
Query: 541 LISGYGKDDNMEGLTKLLFEMEYRSIYPNMFGFTSVIISLCKCGRLEEAEKYLKTMKARS 720
+I G+ D++E KL +EME+R I P F ++ I LC CG+++ EKYL+ MK R
Sbjct: 447 MIQGFINGDDVEQGLKLFYEMEFRKISPGFKVFEALTIGLCACGKVKAGEKYLRIMKRRL 506
Query: 721 FIPS-PNIYERLIAGHLEKGSKTRACQLYNEMV 816
PS +IY+ LI G KT A ++YNEM+
Sbjct: 507 IEPSNVDIYKALIKAFQRIGDKTNADRVYNEMM 539
Score = 72.4 bits (176), Expect = 3e-10
Identities = 54/278 (19%), Positives = 117/278 (42%), Gaps = 5/278 (1%)
Frame = +1
Query: 7 NTCLVYDMIEN-----QRIEEGLVLLKWMLQKNMILDTISYSLVVFAKVKMGKSDSAKEI 171
+T LV+D++ + +E G + K + IL ++ + ++ K + D I
Sbjct: 159 STPLVFDLVVQCYAKIRDLELGFEVFKRLCCCGFILSVVTLNTLIHYSAKSNRVDLVWRI 218
Query: 172 YEEMLKRGFKENAFVCNLFVGAYCEEGRIDEAIGLLEEMASLGFKPSDETFNQLIKGCSL 351
YE + + N + + C+EGR+ E + LL+ + P L+
Sbjct: 219 YECGIDKRVYPNETTIRIMIRVLCKEGRLKEVVDLLDRIHGKRCLPPVIVNTSLVFRVLE 278
Query: 352 DGRSEDSLAFCKQMMSMGLLPSCSSVNEMFGKLCENGKTKEADETLTILLDKGFTPDENT 531
D R E+S++ K+++ ++ + + + G + A +L +GF+ +
Sbjct: 279 DNRIEESMSLLKKLLMKNMVVDTIGYSIVVYAKTKEGDLESARNVFDEMLQRGFSGNAFV 338
Query: 532 YSHLISGYGKDDNMEGLTKLLFEMEYRSIYPNMFGFTSVIISLCKCGRLEEAEKYLKTMK 711
Y+ + + +E + + EME I P F +I + G+ E+ +Y + M
Sbjct: 339 YTAFVRACCERGEVEEAERWMSEMEESGINPYEDTFNCLIEGCARFGKEEKCLEYCEVMV 398
Query: 712 ARSFIPSPNIYERLIAGHLEKGSKTRACQLYNEMVGTG 825
AR +PS + + ++ + + A ++ + +G G
Sbjct: 399 ARGLMPSCSAFNEMVKRLSKIENVKHANEILTKSIGNG 436