BLASTX nr result

ID: Rehmannia22_contig00030928 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00030928
         (452 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263640.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    57   2e-06
ref|XP_006397149.1| hypothetical protein EUTSA_v10028511mg [Eutr...    56   4e-06
gb|EOY16880.1| DEAD-box ATP-dependent RNA helicase 39 isoform 1 ...    55   7e-06

>ref|XP_002263640.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 39 [Vitis vinifera]
          Length = 635

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 41/120 (34%), Positives = 63/120 (52%), Gaps = 1/120 (0%)
 Frame = +2

Query: 71  IEMGTTAKALSFSLLSLPKRFSSNRPLYFSLPLHVHPPSHRVVFHKFRPLCXXXXXXXXX 250
           + +  ++   SFSLLS   R    RPLY      +  P+   VF  F+P+          
Sbjct: 9   VGLSLSSNLFSFSLLSPSMR----RPLY-----KLAIPTTTRVFLGFKPISCSSSSSTTA 59

Query: 251 XXXXXXXXPLQPIKHSILLERLRQRHLKESAETPKA-APPQFSGSKKGKYGENEGSRRKK 427
                    LQP++HSILLE+LR RHLK+SA++P+  +PP  +G K+G+ G  +  ++ K
Sbjct: 60  IEADQA---LQPMRHSILLEKLRFRHLKDSAKSPQTRSPPLSTGGKEGEPGSMKSQKKPK 116


>ref|XP_006397149.1| hypothetical protein EUTSA_v10028511mg [Eutrema salsugineum]
           gi|557098166|gb|ESQ38602.1| hypothetical protein
           EUTSA_v10028511mg [Eutrema salsugineum]
          Length = 633

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 43/116 (37%), Positives = 56/116 (48%)
 Frame = +2

Query: 77  MGTTAKALSFSLLSLPKRFSSNRPLYFSLPLHVHPPSHRVVFHKFRPLCXXXXXXXXXXX 256
           +G +   LS SL S    F+ +R  +    L +H PS R  +H FRPLC           
Sbjct: 2   VGASRTILSLSLSS--SLFTFSRIPHVVPFLRLHKPSSRF-YHAFRPLCAAATAPTETNI 58

Query: 257 XXXXXXPLQPIKHSILLERLRQRHLKESAETPKAAPPQFSGSKKGKYGENEGSRRK 424
                     +KH+ILLERLR RHLKESA  P+  P    G+++     N  SRRK
Sbjct: 59  ADP-----DQLKHTILLERLRLRHLKESAPKPQQRPSSVVGAEE---ENNSNSRRK 106


>gb|EOY16880.1| DEAD-box ATP-dependent RNA helicase 39 isoform 1 [Theobroma cacao]
           gi|508724984|gb|EOY16881.1| DEAD-box ATP-dependent RNA
           helicase 39 isoform 1 [Theobroma cacao]
          Length = 617

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 42/119 (35%), Positives = 54/119 (45%), Gaps = 2/119 (1%)
 Frame = +2

Query: 80  GTTAKALSFSLLSLPKRFSSNRPLYFSLPLHVHPPSHRVVFHKFRPLCXXXXXXXXXXXX 259
           GT+   LS SLLS  K F     L    P  V P         F+PLC            
Sbjct: 9   GTSRTLLSISLLSSTKHFCHYPFLKLPKPSRVLPG--------FKPLCTATAPTPTIIEP 60

Query: 260 XXXXXPLQPIKHSILLERLRQRHLKESAETPKAAPPQFSGSKKGKYGE--NEGSRRKKG 430
                    ++HS+LLERLR RHLK+S  TP  + PQ   +   K G+  ++G +RKKG
Sbjct: 61  -------DQLRHSMLLERLRTRHLKDSTRTPSPSKPQEKVTAFDKEGDASDKGKKRKKG 112


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