BLASTX nr result

ID: Rehmannia22_contig00030873 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00030873
         (362 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516806.1| conserved hypothetical protein [Ricinus comm...    57   3e-06
gb|AFK44336.1| unknown [Lotus japonicus]                               56   6e-06
ref|XP_006586599.1| PREDICTED: F-box/kelch-repeat protein At3g23...    55   7e-06
ref|XP_003627634.1| F-box/kelch-repeat protein [Medicago truncat...    55   7e-06
ref|XP_004301936.1| PREDICTED: F-box/kelch-repeat protein At3g06...    55   1e-05

>ref|XP_002516806.1| conserved hypothetical protein [Ricinus communis]
           gi|223543894|gb|EEF45420.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 403

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 42/118 (35%), Positives = 67/118 (56%), Gaps = 7/118 (5%)
 Frame = +3

Query: 3   EQQRRYNPTVEMKWIDHLPRDLIIEILSRLSPKDLCKFRCVSKSWQDLLTRDMEFTARHI 182
           +QQR  +  VE     +LP ++I+EIL R++ K LC+FRCVSKSW  LL+   +F    I
Sbjct: 6   KQQRNPSHVVEAT-NPNLPHEIIVEILKRVAVKSLCRFRCVSKSWLSLLS-SPQFAKSQI 63

Query: 183 QYS-KQNCLLLVRKYL---SDGIMELNKSKITI---ELISIDMQGNITDKFSEIIDGP 335
             + K N L   R+ L   S  +  ++   I I   ++I++++   + DK +EI+ GP
Sbjct: 64  DLALKSNTLYSKRRRLMFSSYNLYSVDYESIGIDNGDIIAVELDYPLKDKSNEIL-GP 120


>gb|AFK44336.1| unknown [Lotus japonicus]
          Length = 193

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 35/95 (36%), Positives = 50/95 (52%)
 Frame = +3

Query: 54  LPRDLIIEILSRLSPKDLCKFRCVSKSWQDLLTRDMEFTARHIQYSKQNCLLLVRKYLSD 233
           LP +L++EILSRL  K L KFRCV KSW  LL  D  F  +H+  SKQ+ L    +    
Sbjct: 63  LPDELVVEILSRLPVKSLLKFRCVCKSWM-LLISDPYFIKKHLHLSKQSTLFNHHRI--- 118

Query: 234 GIMELNKSKITIELISIDMQGNITDKFSEIIDGPV 338
            I+    ++  ++  S+    N T    E ++ PV
Sbjct: 119 -ILSATTAEFHLKSCSVSSLFNSTSTVCEDLNYPV 152


>ref|XP_006586599.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Glycine max]
          Length = 395

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 24/61 (39%), Positives = 42/61 (68%)
 Frame = +3

Query: 39  KWIDHLPRDLIIEILSRLSPKDLCKFRCVSKSWQDLLTRDMEFTARHIQYSKQNCLLLVR 218
           +++ ++P DLI+EILSRL  KDL +FRCV K+W+ ++  D  F  +H++ S +   L++ 
Sbjct: 5   EYLSYVPDDLIVEILSRLPVKDLMRFRCVCKTWKSIIF-DPSFVKKHLERSSKKIHLIIT 63

Query: 219 K 221
           +
Sbjct: 64  R 64


>ref|XP_003627634.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355521656|gb|AET02110.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 351

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 33/94 (35%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
 Frame = +3

Query: 9   QRRYNPTVEMKWIDHLPRDLIIEILSRLSPKDLCKFRCVSKSWQDLLTRDMEFTARHIQY 188
           +++YN  V+MK   ++P +LII+IL RL  K L  F+CV KSW  L++ D  F   H+  
Sbjct: 3   EKKYNRMVKMKETLYIPYELIIQILLRLPVKSLLCFKCVCKSWFSLIS-DPHFANSHVDV 61

Query: 189 SKQNCLLLVRKYLSDGIMELN-KSKITIELISID 287
           S    +L+ R   + GI  ++ ++ I  +  S+D
Sbjct: 62  SSARIVLISRTPPTVGIRSIDFETSINHDSFSLD 95


>ref|XP_004301936.1| PREDICTED: F-box/kelch-repeat protein At3g06240-like [Fragaria
           vesca subsp. vesca]
          Length = 388

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 26/56 (46%), Positives = 41/56 (73%)
 Frame = +3

Query: 54  LPRDLIIEILSRLSPKDLCKFRCVSKSWQDLLTRDMEFTARHIQYSKQNCLLLVRK 221
           LP ++I+EILSRLS K LC+FRCVSK W+ L+T + +F A H + + ++  + +R+
Sbjct: 15  LPAEIIVEILSRLSVKSLCRFRCVSKPWRSLIT-NTKFIALHARKALEDKEVFLRR 69


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