BLASTX nr result

ID: Rehmannia22_contig00030704 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00030704
         (669 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006358335.1| PREDICTED: uncharacterized protein LOC102596...    67   4e-09
ref|XP_003620005.1| GRF zinc finger containing protein [Medicago...    61   3e-07
gb|EMJ05680.1| hypothetical protein PRUPE_ppa021209mg, partial [...    59   1e-06
gb|EMJ01284.1| hypothetical protein PRUPE_ppa021085mg, partial [...    57   5e-06
ref|XP_003593784.1| GRF zinc finger containing protein [Medicago...    56   9e-06

>ref|XP_006358335.1| PREDICTED: uncharacterized protein LOC102596479 [Solanum tuberosum]
          Length = 179

 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 29/83 (34%), Positives = 50/83 (60%)
 Frame = -2

Query: 488 ELRCHCGFILNVQTSWTKANPGRHFMSCPVRGPNNCGFFKWCEKEISEREKCIIATLMDK 309
           E+RC  G +L ++TSW+  NPGR F SCP  G   C +F+W +  ++ER K +I  L+ K
Sbjct: 23  EVRCFHGLLLTLKTSWSDNNPGRRFWSCPYYGSRKCKYFRWRDDVVNERYKFVIHKLVKK 82

Query: 308 LKAVKAELATSKLECQRHTKMSS 240
           +K +   L  ++ + +   +++S
Sbjct: 83  MKDMNELLVANEKKIKEMEEINS 105


>ref|XP_003620005.1| GRF zinc finger containing protein [Medicago truncatula]
           gi|355495020|gb|AES76223.1| GRF zinc finger containing
           protein [Medicago truncatula]
          Length = 115

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 33/85 (38%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
 Frame = -2

Query: 545 PFSTGSTGSFRCKNCSGDGELRCHCGFILNVQTSWTKANPGRHFMSC-PVRGPNNCGFFK 369
           P+S+ ST S    +C G  +L C+CG    + T+WT  NPGR F  C        C FF+
Sbjct: 4   PYSSSSTVSG--SSCLGKTKLVCYCGVDSPLVTAWTDENPGRRFHGCGKYWQRRKCSFFR 61

Query: 368 WCEKEISEREKCIIATLMDKLKAVK 294
           W + E+ +R+K II  L+ K  A+K
Sbjct: 62  WFDPEVPQRQKKIIRGLLKKNDALK 86


>gb|EMJ05680.1| hypothetical protein PRUPE_ppa021209mg, partial [Prunus persica]
          Length = 124

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
 Frame = -2

Query: 479 CHCGFILNVQTSWTKANPGRHFMSCPVRG-PNNCGFFKWCEKEISEREKCIIATLMDKLK 303
           CHCG    + TSWT  NPGR F  C   G    C FF+W + ++ ER K +I  L+ +L+
Sbjct: 3   CHCGNQCRLTTSWTDNNPGRRFWGCANYGVRRGCAFFEWYDPQVCERSKIVICGLLKRLR 62

Query: 302 AVKAE 288
             + E
Sbjct: 63  KEEEE 67


>gb|EMJ01284.1| hypothetical protein PRUPE_ppa021085mg, partial [Prunus persica]
          Length = 83

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
 Frame = -2

Query: 479 CHCGFILNVQTSWTKANPGRHFMSC-PVRGPNNCGFFKWCEKEISEREKCIIATLMDKLK 303
           CHCG   ++ TSWT  NPGR F  C        C FF+W + ++ ER K +I+ L+ +L+
Sbjct: 14  CHCGNQCHLTTSWTDNNPGRRFWGCADYEVRRGCAFFEWYDPQVCERSKIVISGLLKRLR 73


>ref|XP_003593784.1| GRF zinc finger containing protein [Medicago truncatula]
           gi|355482832|gb|AES64035.1| GRF zinc finger containing
           protein [Medicago truncatula]
          Length = 220

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
 Frame = -2

Query: 551 TAPFSTGSTGSFRCKNCSGDGELRCHCGFILNVQTSWTKANPGRHFMSCPVRGPNN---C 381
           ++ FS GS  S    +     + +C CG    + T+WT  NPGR F  C +   +    C
Sbjct: 7   SSSFSFGSKSSSSSASSWKRPQFKCRCGVDSPLCTAWTVENPGRRFFGCGLYTKSMGKVC 66

Query: 380 GFFKWCEKEISEREKCIIATLMDK 309
            FFKW ++  SEREK +I  L+ K
Sbjct: 67  NFFKWYDEACSEREKKLINALLKK 90


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