BLASTX nr result

ID: Rehmannia22_contig00030543 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00030543
         (580 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006351383.1| PREDICTED: UPF0481 protein At3g47200-like [S...    78   2e-12
ref|XP_004249736.1| PREDICTED: UPF0481 protein At3g47200-like [S...    74   2e-11

>ref|XP_006351383.1| PREDICTED: UPF0481 protein At3g47200-like [Solanum tuberosum]
          Length = 486

 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 20/211 (9%)
 Frame = -3

Query: 575 LYCFAGGNQERKTFLHNQILQKIDVIRSCYADVTIVEKYXXXXXXXXXXXXACLILYFMG 396
           L  F  G+ +   + +N+IL+ +D  RSCY D +I +KY            AC I+  + 
Sbjct: 112 LEMFVSGSSKDVAYFYNKILEVVDNARSCYVDGSI-DKYNDHEFALMMLLDACFIINHIE 170

Query: 395 NDTN-----ITELEKNMSSWLAAFMPHDIMLLENQIPYMVLKLLIGLLMEDDRDAKADEI 231
             T      +     ++     +    D+ LLENQIP+ +LKLLI L  + +   + DE+
Sbjct: 171 LSTTDRYNKLRTTRHHLGMLALSTTVRDMFLLENQIPFWILKLLISLRYDKN---EGDEL 227

Query: 230 IESFARSMMGLGPNPAHQIPGEYVNPPIHILEAF--RLVSVENPNRKHEHDQSESCPRFP 57
           +E F    +        ++   +V  P+H+LEAF  RLVS ++  R          P++ 
Sbjct: 228 LEMFLNFTLFGEYEQKGEMSYNHVEEPLHLLEAFRTRLVSQQSEVRNFHR---TCTPQWL 284

Query: 56  TRRNTMC-------------RSVTDLRAKGI 3
            R+ ++C             RSVTDL+AKGI
Sbjct: 285 KRKKSICNDRVNMKSYIHSFRSVTDLKAKGI 315


>ref|XP_004249736.1| PREDICTED: UPF0481 protein At3g47200-like [Solanum lycopersicum]
           gi|133711801|gb|ABO36619.1| hypothetical protein
           LYC_68t000001 [Solanum lycopersicum]
           gi|133711816|gb|ABO36633.1| hypothetical protein
           SUNLYC_67t000002 [Solanum lycopersicum]
          Length = 486

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 20/211 (9%)
 Frame = -3

Query: 575 LYCFAGGNQERKTFLHNQILQKIDVIRSCYADVTIVEKYXXXXXXXXXXXXACLILYFMG 396
           L  F  G+     + +N+IL+ +D  RSCY D +  +KY            AC I+  + 
Sbjct: 112 LEMFVSGSSRDVAYFYNKILEVVDNARSCYVDGS-TDKYNDHEFALMMLLDACFIINHIE 170

Query: 395 NDTN-----ITELEKNMSSWLAAFMPHDIMLLENQIPYMVLKLLIGLLMEDDRDAKADEI 231
             T      +     ++     +    D+ LLENQIP+ +LKLLI L  + D   + DE+
Sbjct: 171 LSTTDRYNKLRTTRHHLGMLALSTTVRDMFLLENQIPFWILKLLISLRYDKD---EGDEL 227

Query: 230 IESFARSMMGLGPNPAHQIPGEYVNPPIHILEAF--RLVSVENPNRKHEHDQSESCPRFP 57
           +E F    +        ++   +V  P+H+LEAF  RLVS ++  R          P++ 
Sbjct: 228 LEMFLNFTLFGEYEQEGEMSHNHVEEPLHLLEAFRTRLVSQQSEVRSFHR---TCTPQWL 284

Query: 56  TRRNTMC-------------RSVTDLRAKGI 3
            R+ ++              RSVTDL+AKGI
Sbjct: 285 KRKKSISNERVNMKSYIHSFRSVTDLKAKGI 315


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