BLASTX nr result

ID: Rehmannia22_contig00030286 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00030286
         (438 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305681.1| Dof-type zinc finger domain-containing famil...    65   9e-09
ref|XP_002268276.2| PREDICTED: uncharacterized protein LOC100246...    57   3e-06
gb|EXB82806.1| Dof zinc finger protein [Morus notabilis]               56   6e-06
gb|EOY28320.1| Dof-type zinc finger DNA-binding family protein, ...    55   1e-05
gb|EOY28319.1| Dof-type zinc finger DNA-binding family protein, ...    55   1e-05
ref|XP_002519023.1| zinc finger protein, putative [Ricinus commu...    55   1e-05

>ref|XP_002305681.1| Dof-type zinc finger domain-containing family protein [Populus
           trichocarpa] gi|222848645|gb|EEE86192.1| Dof-type zinc
           finger domain-containing family protein [Populus
           trichocarpa]
          Length = 304

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 38/92 (41%), Positives = 57/92 (61%), Gaps = 9/92 (9%)
 Frame = -3

Query: 406 SNFDMNASLIPISNYQSLNGFDNYTGN---------ILDSIEESSSVPWPGPNTSGCLDQ 254
           S+FD + SLI  S++Q LN + NY+G          I+ S   + + PW  PNTS  +D 
Sbjct: 218 SSFDTHPSLICTSSFQPLNVY-NYSGESMEDSTITTIMPSTSSTIAQPWQVPNTSSGMD- 275

Query: 253 LPNYWNWNEIDVFLTSSDHLNISWDDEAEIKP 158
           + NYWNW++I+ ++  S  LN++WDD +EIKP
Sbjct: 276 MTNYWNWDDIENYV--STDLNVTWDD-SEIKP 304


>ref|XP_002268276.2| PREDICTED: uncharacterized protein LOC100246521 [Vitis vinifera]
          Length = 295

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 38/100 (38%), Positives = 54/100 (54%), Gaps = 11/100 (11%)
 Frame = -3

Query: 424 FQLSNLSNFDMNASLIPISNYQSLNGFDNYTGN-----------ILDSIEESSSVPWPGP 278
           F   +LS+FD + S IP S++Q  N + NYTG             + S   + + PW  P
Sbjct: 202 FPFRSLSSFDTSPSSIP-SSFQPSNVY-NYTGEAEAKDGSTTACFMPSTSGTITQPWQMP 259

Query: 277 NTSGCLDQLPNYWNWNEIDVFLTSSDHLNISWDDEAEIKP 158
             S  +D   NYW+W++ID F+  S  LNI WDD +E+KP
Sbjct: 260 AASSVVDTT-NYWSWDDIDTFV--STDLNIPWDD-SEMKP 295


>gb|EXB82806.1| Dof zinc finger protein [Morus notabilis]
          Length = 319

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 9/100 (9%)
 Frame = -3

Query: 430 EIFQLSNLSNFDMNASLIPISN-YQSLNGFDNYTGNILDSIEESSSV--------PWPGP 278
           + F  S  S F+  +SL  ISN +Q+ N   +Y  + +  + + +++        PW  P
Sbjct: 223 QAFSSSTSSPFE--SSLSSISNSFQASNFVCDYGDDQMKLMGDQATITSSCTVQPPWQVP 280

Query: 277 NTSGCLDQLPNYWNWNEIDVFLTSSDHLNISWDDEAEIKP 158
             +     LPNYWNW++ID  L S DH+N+ WDD  + KP
Sbjct: 281 PATSNGMDLPNYWNWDDIDT-LVSVDHINLPWDDAHDFKP 319


>gb|EOY28320.1| Dof-type zinc finger DNA-binding family protein, putative isoform
           2, partial [Theobroma cacao]
          Length = 320

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 41/99 (41%), Positives = 55/99 (55%), Gaps = 10/99 (10%)
 Frame = -3

Query: 424 FQLSNLSNFDMNASLIPISNYQSLNGFDNYTGN----------ILDSIEESSSVPWPGPN 275
           F  S+ S+FD   S I  S +QS   + NYTG           I+ +   + S PW  P 
Sbjct: 228 FSSSSSSSFDTTRSSISTS-FQSSTIY-NYTGETMEDPTITSVIMPTTSGTFSQPWQVPI 285

Query: 274 TSGCLDQLPNYWNWNEIDVFLTSSDHLNISWDDEAEIKP 158
           TS  +D + NYWNW++ID  L S+D LN+ WDD +EIKP
Sbjct: 286 TSSGMD-MTNYWNWDDIDA-LVSTD-LNMPWDD-SEIKP 320


>gb|EOY28319.1| Dof-type zinc finger DNA-binding family protein, putative isoform 1
           [Theobroma cacao]
          Length = 372

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 41/99 (41%), Positives = 55/99 (55%), Gaps = 10/99 (10%)
 Frame = -3

Query: 424 FQLSNLSNFDMNASLIPISNYQSLNGFDNYTGN----------ILDSIEESSSVPWPGPN 275
           F  S+ S+FD   S I  S +QS   + NYTG           I+ +   + S PW  P 
Sbjct: 280 FSSSSSSSFDTTRSSISTS-FQSSTIY-NYTGETMEDPTITSVIMPTTSGTFSQPWQVPI 337

Query: 274 TSGCLDQLPNYWNWNEIDVFLTSSDHLNISWDDEAEIKP 158
           TS  +D + NYWNW++ID  L S+D LN+ WDD +EIKP
Sbjct: 338 TSSGMD-MTNYWNWDDIDA-LVSTD-LNMPWDD-SEIKP 372


>ref|XP_002519023.1| zinc finger protein, putative [Ricinus communis]
           gi|223541686|gb|EEF43234.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 307

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 11/100 (11%)
 Frame = -3

Query: 424 FQLSNLSNFDMNASLIPISNYQSLNGFDNYTGNILDSIEESSSVP-----------WPGP 278
           F   N S+FD N S I  +++Q+ N ++  TG  +D    ++ +P           W  P
Sbjct: 212 FPYLNSSSFDTNPSSIS-NSFQASNVYNYSTGETMDDSVITTVMPTASSCITHHQLWQVP 270

Query: 277 NTSGCLDQLPNYWNWNEIDVFLTSSDHLNISWDDEAEIKP 158
           N S  +D + +YWNW++ID  ++ SD LN+ WDD  E+KP
Sbjct: 271 NASRGMD-ITSYWNWDDIDNLVSGSD-LNLPWDD-PELKP 307


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