BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00030217
         (547 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EPS60113.1| hypothetical protein M569_14691, partial [Genlise...   131   9e-29
ref|XP_004230733.1| PREDICTED: RNA pseudourine synthase 4, mitoc...   130   3e-28
ref|XP_006346360.1| PREDICTED: RNA pseudouridine synthase 4, mit...   128   8e-28
gb|EOX98365.1| Ribosomal pseudouridine synthase, putative [Theob...   121   1e-25
ref|XP_002518674.1| ribosomal pseudouridine synthase, putative [...   115   5e-24
ref|XP_004305959.1| PREDICTED: RNA pseudourine synthase 4, mitoc...   115   7e-24
ref|XP_006297582.1| hypothetical protein CARUB_v10013603mg [Caps...   114   1e-23
ref|XP_002313876.2| hypothetical protein POPTR_0009s09860g [Popu...   108   8e-22
gb|EMJ01009.1| hypothetical protein PRUPE_ppa004969mg [Prunus pe...   108   8e-22
gb|EMJ01008.1| hypothetical protein PRUPE_ppa004969mg [Prunus pe...   108   8e-22
ref|NP_188575.1| RNA pseudourine synthase 4 [Arabidopsis thalian...   108   1e-21
ref|XP_006406501.1| hypothetical protein EUTSA_v10020633mg [Eutr...   107   2e-21
ref|XP_002883182.1| pseudouridine synthase family protein [Arabi...   107   2e-21
ref|XP_002282614.1| PREDICTED: RNA pseudourine synthase 4, mitoc...   107   2e-21
ref|XP_006422925.1| hypothetical protein CICLE_v10028283mg [Citr...   105   5e-21
gb|EXB63685.1| RNA pseudourine synthase 4 [Morus notabilis]           104   1e-20
ref|XP_004170490.1| PREDICTED: RNA pseudourine synthase 4, mitoc...   101   1e-19
ref|XP_004137095.1| PREDICTED: RNA pseudourine synthase 4, mitoc...    99   7e-19
ref|XP_002459881.1| hypothetical protein SORBIDRAFT_02g012960 [S...    91   1e-16
ref|XP_006847251.1| hypothetical protein AMTR_s00015p00025410 [A...    89   5e-16

>gb|EPS60113.1| hypothetical protein M569_14691, partial [Genlisea aurea]
          Length = 165

 Score =  131 bits (330), Expect = 9e-29
 Identities = 63/104 (60%), Positives = 79/104 (75%)
 Frame = +2

Query: 224 WLILPPFTPTADGSSIGKELYGRPANTNTTALKWILKCCPHLPRCLVQKLFRLRQIRKEC 403
           WL LP F+ TAD  S GK ++GR   TN T LKWIL CCP LPR LVQKLFRLR++RK+C
Sbjct: 1   WLTLPAFSETADACSTGKRIFGRHPVTNMTTLKWILNCCPQLPRSLVQKLFRLRRVRKKC 60

Query: 404 SNSESKEQRPRRVGAKDLMDIGDKIFLPKSVDGKSPSKTVENQS 535
           S   ++E +P+RVGA DLM++GD IFLPKSVDG++ S T  N++
Sbjct: 61  SYF-TEEMQPKRVGATDLMEVGDIIFLPKSVDGEASSPTSSNKN 103


>ref|XP_004230733.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Solanum
           lycopersicum]
          Length = 467

 Score =  130 bits (326), Expect = 3e-28
 Identities = 78/172 (45%), Positives = 106/172 (61%), Gaps = 7/172 (4%)
 Frame = +2

Query: 53  MAEKHFVRELFRQWRPNAAASSFRGVLTKGTYEQQYYYSTATATNGENCEKEKNYN-QWL 229
           MA     R +F + R   AAS     L    Y  Q +Y+T T T+ + C + +N   +WL
Sbjct: 1   MARPWLFRRVFHRSRQLFAASDDVQTLYSAFYRLQCHYAT-TVTDAQVCNRNENEKAKWL 59

Query: 230 ILPPFTPTADGSSIGKELYG-----RPANTNT-TALKWILKCCPHLPRCLVQKLFRLRQI 391
            LPPFT   +G+++G+EL G        +TNT TALKW+ +CCP LP+ LVQKLFRLRQ+
Sbjct: 60  TLPPFTAAVNGAALGRELAGVKMDVNENSTNTMTALKWVQRCCPELPKSLVQKLFRLRQV 119

Query: 392 RKECSNSESKEQRPRRVGAKDLMDIGDKIFLPKSVDGKSPSKTVENQSFSNE 547
           R++ SN E  EQRP+RV AK+ M++GD+IFLP +V  K PS+ V     S E
Sbjct: 120 RRDSSNVE--EQRPKRVSAKESMNVGDRIFLPITVQ-KFPSEKVVYYPSSEE 168


>ref|XP_006346360.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like
           [Solanum tuberosum]
          Length = 467

 Score =  128 bits (322), Expect = 8e-28
 Identities = 78/172 (45%), Positives = 107/172 (62%), Gaps = 7/172 (4%)
 Frame = +2

Query: 53  MAEKHFVRELFRQWRPNAAASSFRGVLTKGTYEQQYYYSTATATNGENCEKEKNYN-QWL 229
           MA    +R +  + R   AAS     L    Y  Q +Y+T T T  + C + +N   +WL
Sbjct: 1   MAGPWLLRRVVHRSRQLFAASDDVQTLYSAFYRFQCHYAT-TVTAAQVCNRNENEKAKWL 59

Query: 230 ILPPFTPTADGSSIGKELYG-----RPANTNT-TALKWILKCCPHLPRCLVQKLFRLRQI 391
            LPPFT T +G+++G+EL G     +  +TNT TALKW+ +CCP LP+ LVQKLFRLRQ+
Sbjct: 60  TLPPFTATVNGAALGRELAGVKMDVKENSTNTMTALKWVQRCCPELPKSLVQKLFRLRQV 119

Query: 392 RKECSNSESKEQRPRRVGAKDLMDIGDKIFLPKSVDGKSPSKTVENQSFSNE 547
           R++ SN E  EQRP+RV AK+ M++GD+IFLP +V  K PS+ V     S E
Sbjct: 120 RRDSSNVE--EQRPKRVSAKESMNVGDRIFLPITVQ-KFPSEKVVYYPSSEE 168


>gb|EOX98365.1| Ribosomal pseudouridine synthase, putative [Theobroma cacao]
          Length = 477

 Score =  121 bits (304), Expect = 1e-25
 Identities = 68/160 (42%), Positives = 96/160 (60%), Gaps = 16/160 (10%)
 Frame = +2

Query: 65  HFVRELFRQWRPNAAASSFRGVLTKGTYEQQYYYSTATATNGE------NCEKEKNYNQW 226
           + +R L R  RP A      G++    ++ +Y+YST    + E      N EK+K  N+W
Sbjct: 6   NLLRRLLRSSRPPATHGG-NGLIVSAFHQLRYHYSTTNELSAEHLKDDGNSEKKKK-NKW 63

Query: 227 LILPPFTPTADGSSIGKELYGRP---ANTNTTALKWILKCCPHLPRCLVQKLFRLRQIRK 397
             LPPFT T + S +G +L G+P   A   TTA+KW+++CCP LPR LVQKLFRLRQ+R+
Sbjct: 64  FTLPPFTKTVNASVLGAKLSGKPHSKAANETTAVKWVMRCCPELPRSLVQKLFRLRQVRR 123

Query: 398 EC-------SNSESKEQRPRRVGAKDLMDIGDKIFLPKSV 496
           E           + +  + +RVGAKD ++IGD+IFLP SV
Sbjct: 124 ESHVLEVAGDGCQVQTVQLKRVGAKDALNIGDRIFLPFSV 163


>ref|XP_002518674.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
           gi|223542055|gb|EEF43599.1| ribosomal pseudouridine
           synthase, putative [Ricinus communis]
          Length = 536

 Score =  115 bits (289), Expect = 5e-24
 Identities = 61/127 (48%), Positives = 83/127 (65%), Gaps = 12/127 (9%)
 Frame = +2

Query: 152 QQYYYSTATATNGENCEKE-------KNYNQWLILPPFTPTADGSSIGKELYGRP---AN 301
           Q +Y++T T T  ++  K+       KN  ++  LPP+T T  GS++GK L       A+
Sbjct: 97  QSHYFTTTTITQTKSSTKDQTSKNNTKNTGKFFTLPPYTSTISGSALGKALSATATAKAS 156

Query: 302 TNTTALKWILKCCPHLPRCLVQKLFRLRQIRKECSN--SESKEQRPRRVGAKDLMDIGDK 475
           T TTALKW+L+CCP LPR LVQKLFRLRQ+++E  N      E + +RV AKDLM++GD+
Sbjct: 157 TETTALKWVLRCCPELPRNLVQKLFRLRQVKRELLNVGDGEMEHKTKRVAAKDLMNVGDR 216

Query: 476 IFLPKSV 496
           IFLP SV
Sbjct: 217 IFLPISV 223


>ref|XP_004305959.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Fragaria
           vesca subsp. vesca]
          Length = 476

 Score =  115 bits (288), Expect = 7e-24
 Identities = 62/143 (43%), Positives = 89/143 (62%), Gaps = 9/143 (6%)
 Frame = +2

Query: 95  RPNAAASSFRGVLTKGTYEQQYYYSTATATNGENCEKEKNYNQWLILPPFTPTADGSSIG 274
           RP  ++SS    + +  +  + Y +T T       +K+K  N+W  LPPFT T +G+++G
Sbjct: 13  RPPLSSSSAESAVDRIFHTFRSYSTTQTVHE----DKQKRGNKWFTLPPFTDTVNGAALG 68

Query: 275 KEL--------YGRP-ANTNTTALKWILKCCPHLPRCLVQKLFRLRQIRKECSNSESKEQ 427
           +EL        Y +P A   TTALKW+ +CCP +PR LVQKLFRLRQ+R+E S+ +   Q
Sbjct: 69  RELSRSVGRDVYAKPSAAAATTALKWVTRCCPEIPRNLVQKLFRLRQVRREASDMDQSVQ 128

Query: 428 RPRRVGAKDLMDIGDKIFLPKSV 496
             +RVG KD M++GD+I LP SV
Sbjct: 129 PLKRVGTKDSMNLGDRICLPISV 151


>ref|XP_006297582.1| hypothetical protein CARUB_v10013603mg [Capsella rubella]
           gi|482566291|gb|EOA30480.1| hypothetical protein
           CARUB_v10013603mg [Capsella rubella]
          Length = 476

 Score =  114 bits (286), Expect = 1e-23
 Identities = 56/117 (47%), Positives = 79/117 (67%), Gaps = 11/117 (9%)
 Frame = +2

Query: 221 QWLILPPFTPTADGSSIGKELY-------GRPANTNTTALKWILKCCPHLPRCLVQKLFR 379
           +WL LPPF+PT DG+++GKEL        G   ++ TTAL+WIL+C P LPR LVQKLFR
Sbjct: 54  KWLTLPPFSPTVDGTAVGKELASEGDSITGSTDSSTTTALRWILRCRPDLPRTLVQKLFR 113

Query: 380 LRQIRKE----CSNSESKEQRPRRVGAKDLMDIGDKIFLPKSVDGKSPSKTVENQSF 538
           LRQ+R+E    C   E +  + +RV AK+ +++GD+I+LP SVD  +P    + +SF
Sbjct: 114 LRQVRREMSVSCDGDEVQRSQLKRVAAKESLNVGDRIYLPLSVDNDAPPPPAKKESF 170


>ref|XP_002313876.2| hypothetical protein POPTR_0009s09860g [Populus trichocarpa]
           gi|550331407|gb|EEE87831.2| hypothetical protein
           POPTR_0009s09860g [Populus trichocarpa]
          Length = 471

 Score =  108 bits (270), Expect = 8e-22
 Identities = 60/117 (51%), Positives = 75/117 (64%), Gaps = 10/117 (8%)
 Frame = +2

Query: 176 TATNGENCEKEKNYNQWLILPPFTPTADGSSIGKELYGR-PANT--NTTALKWILKCCPH 346
           T T  +N  +     +W  LPP+T T +GS +G  L  R PA +   TTALKW+L+CCP 
Sbjct: 42  TNTKSQNHYENDKRGKWFTLPPYTSTINGSVLGIALSARIPAKSASETTALKWVLRCCPE 101

Query: 347 LPRCLVQKLFRLRQIRKECSNSES-------KEQRPRRVGAKDLMDIGDKIFLPKSV 496
           LPR LVQKLFRLRQ+R+E    ES       +E R +RV AKD MD+GD+IFLP SV
Sbjct: 102 LPRNLVQKLFRLRQVRRESPVMESCNLGDQGQEHRLKRVAAKDSMDVGDRIFLPISV 158


>gb|EMJ01009.1| hypothetical protein PRUPE_ppa004969mg [Prunus persica]
          Length = 483

 Score =  108 bits (270), Expect = 8e-22
 Identities = 60/121 (49%), Positives = 77/121 (63%), Gaps = 22/121 (18%)
 Frame = +2

Query: 200 EKEKNYNQWLILPPFTPTADGSSIGKEL-----YGRPA----------NTNTTALKWILK 334
           ++EK   +W  LPPFT T +GS++GKEL     YGR            +T TTALKW+ +
Sbjct: 42  DREKRGEKWFTLPPFTATINGSALGKELSRNRSYGRDVITKTATASTTSTTTTALKWVTR 101

Query: 335 CCPHLPRCLVQKLFRLRQIRK-----ECSNS--ESKEQRPRRVGAKDLMDIGDKIFLPKS 493
           CCP LPR LVQKLFRLRQ+R+     ECS    E+ E+  +RV AKD M++GD+I LP S
Sbjct: 102 CCPELPRSLVQKLFRLRQVRRESCDMECSGEGVEALERPLKRVAAKDSMNVGDRIHLPLS 161

Query: 494 V 496
           V
Sbjct: 162 V 162


>gb|EMJ01008.1| hypothetical protein PRUPE_ppa004969mg [Prunus persica]
          Length = 481

 Score =  108 bits (270), Expect = 8e-22
 Identities = 60/121 (49%), Positives = 77/121 (63%), Gaps = 22/121 (18%)
 Frame = +2

Query: 200 EKEKNYNQWLILPPFTPTADGSSIGKEL-----YGRPA----------NTNTTALKWILK 334
           ++EK   +W  LPPFT T +GS++GKEL     YGR            +T TTALKW+ +
Sbjct: 42  DREKRGEKWFTLPPFTATINGSALGKELSRNRSYGRDVITKTATASTTSTTTTALKWVTR 101

Query: 335 CCPHLPRCLVQKLFRLRQIRK-----ECSNS--ESKEQRPRRVGAKDLMDIGDKIFLPKS 493
           CCP LPR LVQKLFRLRQ+R+     ECS    E+ E+  +RV AKD M++GD+I LP S
Sbjct: 102 CCPELPRSLVQKLFRLRQVRRESCDMECSGEGVEALERPLKRVAAKDSMNVGDRIHLPLS 161

Query: 494 V 496
           V
Sbjct: 162 V 162


>ref|NP_188575.1| RNA pseudourine synthase 4 [Arabidopsis thaliana]
           gi|75274073|sp|Q9LT72.1|PUS4_ARATH RecName: Full=RNA
           pseudouridine synthase 4, mitochondrial; AltName:
           Full=RNA pseudouridylate synthase 4; AltName:
           Full=RNA-uridine isomerase 4; Flags: Precursor
           gi|11994467|dbj|BAB02469.1| unnamed protein product
           [Arabidopsis thaliana] gi|110737723|dbj|BAF00800.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|134031916|gb|ABO45695.1| At3g19440 [Arabidopsis
           thaliana] gi|332642719|gb|AEE76240.1| RNA pseudourine
           synthase 4 [Arabidopsis thaliana]
          Length = 477

 Score =  108 bits (269), Expect = 1e-21
 Identities = 54/115 (46%), Positives = 78/115 (67%), Gaps = 11/115 (9%)
 Frame = +2

Query: 200 EKEKNYNQWLILPPFTPTADGSSIGKELYG-------RPANTNTTALKWILKCCPHLPRC 358
           + + +  +WL LPPF+PT DG+++GK+L            N+ TTAL+WIL+C P LPR 
Sbjct: 47  QTDDSRGKWLTLPPFSPTIDGTAVGKDLLSDGDSVKSSTDNSKTTALRWILRCRPDLPRT 106

Query: 359 LVQKLFRLRQIRKECSNS----ESKEQRPRRVGAKDLMDIGDKIFLPKSVDGKSP 511
           LVQKLFRLRQ+R+E S S    E +  + +RV AK+ +++GD+I+LP SVD  +P
Sbjct: 107 LVQKLFRLRQVRREMSMSVDGDELQRSQLKRVAAKESLNVGDRIYLPLSVDNDTP 161


>ref|XP_006406501.1| hypothetical protein EUTSA_v10020633mg [Eutrema salsugineum]
           gi|557107647|gb|ESQ47954.1| hypothetical protein
           EUTSA_v10020633mg [Eutrema salsugineum]
          Length = 477

 Score =  107 bits (267), Expect = 2e-21
 Identities = 56/130 (43%), Positives = 84/130 (64%), Gaps = 10/130 (7%)
 Frame = +2

Query: 152 QQYYYSTATATNGENCEKEKNYNQWLILPPFTPTADGSSIGKELYG------RPANTNTT 313
           Q+  Y T  A + ++  + K    WL LPPF+PT D +++GKEL+         ++ +TT
Sbjct: 38  QRRSYGTPLADDDDDDPRGK----WLTLPPFSPTIDAAAVGKELFSDGDSVKASSDGSTT 93

Query: 314 ALKWILKCCPHLPRCLVQKLFRLRQIRKE----CSNSESKEQRPRRVGAKDLMDIGDKIF 481
           AL+WIL+C P LPR LVQKLFRLRQ+R+E    C   E +  + +RV AK+ +++GD+I+
Sbjct: 94  ALRWILRCRPDLPRTLVQKLFRLRQVRREMSLSCDGDELQRSQLKRVAAKESLNLGDRIY 153

Query: 482 LPKSVDGKSP 511
           LP SV+  +P
Sbjct: 154 LPLSVNNDAP 163


>ref|XP_002883182.1| pseudouridine synthase family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297329022|gb|EFH59441.1| pseudouridine
           synthase family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 477

 Score =  107 bits (267), Expect = 2e-21
 Identities = 60/149 (40%), Positives = 91/149 (61%), Gaps = 11/149 (7%)
 Frame = +2

Query: 98  PNAAASSFRGVLTKGTYEQQYYYSTATATNGENCEKEKNYNQWLILPPFTPTADGSSIGK 277
           P+   S+F+   TK      ++ S + +T     + + +   WL LPPF+PT DG+++GK
Sbjct: 18  PSPTISAFKDP-TKSLSAAAHHCSRSYST----AQTDDSRGNWLTLPPFSPTIDGTAVGK 72

Query: 278 ELYG-------RPANTNTTALKWILKCCPHLPRCLVQKLFRLRQIRKECSNS----ESKE 424
           +L            N+ TTAL+WIL+C P LPR LVQKLFRLRQ+R++ S S    E + 
Sbjct: 73  DLLSDGDSVKASTDNSKTTALRWILRCRPDLPRTLVQKLFRLRQVRRQMSLSVDGHELQR 132

Query: 425 QRPRRVGAKDLMDIGDKIFLPKSVDGKSP 511
            + +RV AK+ +++GD+I+LP SVD  +P
Sbjct: 133 SQLKRVAAKESLNVGDRIYLPLSVDNDTP 161


>ref|XP_002282614.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial [Vitis
           vinifera] gi|296090438|emb|CBI40257.3| unnamed protein
           product [Vitis vinifera]
          Length = 476

 Score =  107 bits (266), Expect = 2e-21
 Identities = 56/125 (44%), Positives = 77/125 (61%), Gaps = 16/125 (12%)
 Frame = +2

Query: 173 ATATNGENCEKEKNYNQWLILPPFTPTADGSSIGKELYGRPANTNT---------TALKW 325
           AT+ +  +   +    +W  LP FTP  D SS+GK L G   + NT         TALKW
Sbjct: 39  ATSNDAVSEAHKSKKGKWFTLPAFTPVVDASSLGKVLSGHRTDLNTGNTTAGASTTALKW 98

Query: 326 ILKCCPHLPRCLVQKLFRLRQIRKECSNS-------ESKEQRPRRVGAKDLMDIGDKIFL 484
           +++CCP LPR LVQKLFRLRQ+R+E  N        +++E R +RV AKDLM++GD+I L
Sbjct: 99  VVRCCPQLPRSLVQKLFRLRQVRRESYNMITSDIGVQNQEHRLKRVAAKDLMNLGDQILL 158

Query: 485 PKSVD 499
           P +V+
Sbjct: 159 PITVE 163


>ref|XP_006422925.1| hypothetical protein CICLE_v10028283mg [Citrus clementina]
           gi|557524859|gb|ESR36165.1| hypothetical protein
           CICLE_v10028283mg [Citrus clementina]
          Length = 494

 Score =  105 bits (263), Expect = 5e-21
 Identities = 69/186 (37%), Positives = 106/186 (56%), Gaps = 24/186 (12%)
 Frame = +2

Query: 32  INLKP*NMAEKHFVREL-FRQWRPNAAASSF--RGVLTKGT--YEQQYYYSTATATNGE- 193
           + ++  N+ E  F R+L   + RP +A      + +L+  +  +  Q  Y+T T T    
Sbjct: 2   VKIRNQNLTEMLFCRKLPLLRSRPFSALHGVARQAILSPSSSFHHHQSCYATKTLTRNNK 61

Query: 194 ----NCEKEKNYN-----QWLILPPFTPTADGSSIGKELY--GRPANTNTTALKWILKCC 340
               NC+   N +     +W  LPPFT T DGS++G++L    +   + TTALKW+L+CC
Sbjct: 62  THINNCDDNNNGDDERRGKWFTLPPFTSTIDGSALGRQLACPSKSPISETTALKWVLQCC 121

Query: 341 PHLPRCLVQKLFRLRQIRKECSNSES-------KEQRPRRVGAKDLMDIGDKIFLPKSVD 499
           P LPR  VQKLFRL Q+R+E  + +S       +E + +RV AKD + +GD+IFLP S+ 
Sbjct: 122 PGLPRNFVQKLFRLSQVRRESPSLDSSANEGHEQEIKLKRVAAKDSLKLGDRIFLPISIQ 181

Query: 500 GKSPSK 517
            +SPS+
Sbjct: 182 -ESPSR 186


>gb|EXB63685.1| RNA pseudourine synthase 4 [Morus notabilis]
          Length = 470

 Score =  104 bits (260), Expect = 1e-20
 Identities = 56/118 (47%), Positives = 71/118 (60%), Gaps = 17/118 (14%)
 Frame = +2

Query: 194 NCEKEKNYNQWLILPPFTPTADGSSIGKELYGRP----------ANTNTTALKWILKCCP 343
           +   EKN  +W  LPP T T DG+ +GK + G             +  TTALKW+++CCP
Sbjct: 39  SASSEKNGTKWFTLPPHTATVDGAVLGKAIAGAKDDDVKVLQASKSAATTALKWVVRCCP 98

Query: 344 HLPRCLVQKLFRLRQIRKECSNSES-------KEQRPRRVGAKDLMDIGDKIFLPKSV 496
            LPR LVQKLFRLRQ+R+E  N E         + R RRV AKD +++GDKIFLP SV
Sbjct: 99  ELPRSLVQKLFRLRQVRRESFNVEDCNAGDQLGKPRLRRVSAKDSLNLGDKIFLPISV 156


>ref|XP_004170490.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Cucumis
           sativus]
          Length = 471

 Score =  101 bits (251), Expect = 1e-19
 Identities = 52/120 (43%), Positives = 72/120 (60%), Gaps = 13/120 (10%)
 Frame = +2

Query: 200 EKEKNYNQWLILPPFTPTADGSSIGKELYGRPANTNT-------TALKWILKCCPHLPRC 358
           + EK  N+W  LPP+T T +GS +G  +                TALKW+++CCP LPR 
Sbjct: 52  KNEKGSNRWFTLPPYTATVNGSILGNRIMNGGGQAELGASTAAITALKWVIRCCPELPRS 111

Query: 359 LVQKLFRLRQIRKECSNSESKE------QRPRRVGAKDLMDIGDKIFLPKSVDGKSPSKT 520
           LVQKLFRLR++R+  S  E+ E       + +RV AKD++++GD+IFLP SV   S  KT
Sbjct: 112 LVQKLFRLRKVRRGSSMIENSEYNLEARDQLKRVAAKDILNVGDQIFLPMSVQVFSTEKT 171


>ref|XP_004137095.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Cucumis
           sativus]
          Length = 466

 Score = 99.0 bits (245), Expect = 7e-19
 Identities = 51/118 (43%), Positives = 71/118 (60%), Gaps = 11/118 (9%)
 Frame = +2

Query: 200 EKEKNYNQWLILPPFTPTADGSSIGKELYGRPANTNT-------TALKWILKCCPHLPRC 358
           + EK  N+W  LPP+T T +GS +G  +                TALKW+++CCP LPR 
Sbjct: 52  KNEKGSNRWFTLPPYTATVNGSILGNRIMNGGGQAELGASTAAITALKWVIRCCPELPRS 111

Query: 359 LVQKLFRLRQIRKE----CSNSESKEQRPRRVGAKDLMDIGDKIFLPKSVDGKSPSKT 520
           LVQKLFRLR++ ++    C NS     + +RV AKD++++GD+IFLP SV   S  KT
Sbjct: 112 LVQKLFRLRKVPRQLNVGCGNS---HHQLKRVAAKDILNVGDQIFLPMSVQVFSTEKT 166


>ref|XP_002459881.1| hypothetical protein SORBIDRAFT_02g012960 [Sorghum bicolor]
           gi|241923258|gb|EER96402.1| hypothetical protein
           SORBIDRAFT_02g012960 [Sorghum bicolor]
          Length = 246

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 53/150 (35%), Positives = 83/150 (55%), Gaps = 18/150 (12%)
 Frame = +2

Query: 152 QQYYYSTATATNGENCEK-------EKNYNQWLILPPFTPTADGSSIGKELY----GRPA 298
           QQY+   ++A      +        E+N  +W+ LPPF P  D ++  + +Y    G  +
Sbjct: 28  QQYFAGLSSAVGHVTLDDGGRIGGGEENKKRWVELPPFAPL-DANAAARAIYRGDNGEGS 86

Query: 299 NTNTTALKWILKCCPHLPRCLVQKLFRLRQIRK-------ECSNSESKEQRPRRVGAKDL 457
            +N+TA++W+ +CCPHLP  LVQKLFRLR+++K         ++S +++ R RRV AKD 
Sbjct: 87  RSNSTAIRWVRRCCPHLPASLVQKLFRLRKVKKNLVTADTSSTDSIAQQLRLRRVSAKDE 146

Query: 458 MDIGDKIFLPKSVDGKSPSKTVENQSFSNE 547
           +  GD +FLP   D    S   E + F N+
Sbjct: 147 LVPGDILFLP---DNIQESSVTEKKKFGNK 173


>ref|XP_006847251.1| hypothetical protein AMTR_s00015p00025410 [Amborella trichopoda]
           gi|548850328|gb|ERN08832.1| hypothetical protein
           AMTR_s00015p00025410 [Amborella trichopoda]
          Length = 457

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 51/135 (37%), Positives = 79/135 (58%), Gaps = 8/135 (5%)
 Frame = +2

Query: 167 STATATNGENCEKEKNYNQWLILPPFTPTADGSSIGKELYGRPANTNTTALKWILKCCPH 346
           S +T  + E  ++ +   +W  LP F   +   SI      +  +T  TALKW+L+CCP 
Sbjct: 30  SLSTTASLEEDKEVRRQCKWFTLPSFPGASLSPSISTAKTAKAPST--TALKWVLRCCPQ 87

Query: 347 LPRCLVQKLFRLRQIRKE--------CSNSESKEQRPRRVGAKDLMDIGDKIFLPKSVDG 502
           +PR L+QKLFRLRQ+RKE        C + +++ Q+ +RV AKD ++ GD+IFLP +V  
Sbjct: 88  VPRSLIQKLFRLRQVRKESLNPAIASCLHKQAQYQQIKRVFAKDTLNSGDRIFLPITV-- 145

Query: 503 KSPSKTVENQSFSNE 547
            +P+  VE+    N+
Sbjct: 146 -NPAVEVEDDYICNK 159