BLASTX nr result
ID: Rehmannia22_contig00030205
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00030205
(303 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004235502.1| PREDICTED: mediator of RNA polymerase II tra... 124 2e-26
ref|XP_006342856.1| PREDICTED: mediator of RNA polymerase II tra... 120 1e-25
ref|XP_006342855.1| PREDICTED: mediator of RNA polymerase II tra... 120 1e-25
ref|XP_002267562.2| PREDICTED: uncharacterized protein LOC100247... 118 7e-25
emb|CBI18432.3| unnamed protein product [Vitis vinifera] 118 7e-25
gb|EPS63687.1| hypothetical protein M569_11096, partial [Genlise... 116 3e-24
ref|XP_006465187.1| PREDICTED: mediator of RNA polymerase II tra... 112 4e-23
ref|XP_006465185.1| PREDICTED: mediator of RNA polymerase II tra... 112 4e-23
ref|XP_006427784.1| hypothetical protein CICLE_v10025265mg [Citr... 112 7e-23
ref|XP_006427783.1| hypothetical protein CICLE_v10025265mg [Citr... 112 7e-23
ref|XP_002513321.1| conserved hypothetical protein [Ricinus comm... 108 7e-22
ref|XP_002315372.2| hypothetical protein POPTR_0010s25960g [Popu... 108 1e-21
gb|EMJ23232.1| hypothetical protein PRUPE_ppa003036mg [Prunus pe... 108 1e-21
gb|EMJ23231.1| hypothetical protein PRUPE_ppa003036mg [Prunus pe... 108 1e-21
ref|XP_006292399.1| hypothetical protein CARUB_v10018612mg [Caps... 107 2e-21
ref|XP_004166654.1| PREDICTED: mediator of RNA polymerase II tra... 106 3e-21
ref|XP_004144418.1| PREDICTED: mediator of RNA polymerase II tra... 106 3e-21
ref|NP_178407.2| mediator subunit 8 [Arabidopsis thaliana] gi|75... 106 4e-21
gb|AAC32925.1| unknown protein [Arabidopsis thaliana] 106 4e-21
ref|XP_003611429.1| hypothetical protein MTR_5g013930 [Medicago ... 105 8e-21
>ref|XP_004235502.1| PREDICTED: mediator of RNA polymerase II transcription subunit
8-like [Solanum lycopersicum]
Length = 530
Score = 124 bits (310), Expect = 2e-26
Identities = 65/78 (83%), Positives = 68/78 (87%), Gaps = 1/78 (1%)
Frame = +1
Query: 73 LEGV-AMPGVQDQQPPPARVVERLNPAVQQQLNLDSVKTRAISLFKAISRILEDFDAIGR 249
+EGV A Q QQP P RVVE LNPAVQQQLNL+SVKTRA+SLFKAISRILEDFDAI R
Sbjct: 1 MEGVVAAQDQQQQQPQPPRVVEGLNPAVQQQLNLESVKTRAVSLFKAISRILEDFDAIAR 60
Query: 250 TNAVPKWQDILGQFSMVN 303
TNAVPKWQDILGQFSMVN
Sbjct: 61 TNAVPKWQDILGQFSMVN 78
>ref|XP_006342856.1| PREDICTED: mediator of RNA polymerase II transcription subunit
8-like isoform X2 [Solanum tuberosum]
Length = 534
Score = 120 bits (302), Expect = 1e-25
Identities = 64/78 (82%), Positives = 67/78 (85%), Gaps = 1/78 (1%)
Frame = +1
Query: 73 LEGV-AMPGVQDQQPPPARVVERLNPAVQQQLNLDSVKTRAISLFKAISRILEDFDAIGR 249
+EGV A Q QQ P RVVE LNPAVQQQLNL+SVKTRA+SLFKAISRILEDFDAI R
Sbjct: 1 MEGVVAAQDQQQQQQQPPRVVEGLNPAVQQQLNLESVKTRAVSLFKAISRILEDFDAIAR 60
Query: 250 TNAVPKWQDILGQFSMVN 303
TNAVPKWQDILGQFSMVN
Sbjct: 61 TNAVPKWQDILGQFSMVN 78
>ref|XP_006342855.1| PREDICTED: mediator of RNA polymerase II transcription subunit
8-like isoform X1 [Solanum tuberosum]
Length = 535
Score = 120 bits (302), Expect = 1e-25
Identities = 64/78 (82%), Positives = 67/78 (85%), Gaps = 1/78 (1%)
Frame = +1
Query: 73 LEGV-AMPGVQDQQPPPARVVERLNPAVQQQLNLDSVKTRAISLFKAISRILEDFDAIGR 249
+EGV A Q QQ P RVVE LNPAVQQQLNL+SVKTRA+SLFKAISRILEDFDAI R
Sbjct: 1 MEGVVAAQDQQQQQQQPPRVVEGLNPAVQQQLNLESVKTRAVSLFKAISRILEDFDAIAR 60
Query: 250 TNAVPKWQDILGQFSMVN 303
TNAVPKWQDILGQFSMVN
Sbjct: 61 TNAVPKWQDILGQFSMVN 78
>ref|XP_002267562.2| PREDICTED: uncharacterized protein LOC100247963 [Vitis vinifera]
Length = 605
Score = 118 bits (296), Expect = 7e-25
Identities = 62/83 (74%), Positives = 67/83 (80%), Gaps = 3/83 (3%)
Frame = +1
Query: 64 MAALEGVAMPGVQDQQP---PPARVVERLNPAVQQQLNLDSVKTRAISLFKAISRILEDF 234
MAA+EG+ Q QQ PP VERLNPAVQQQLNL+SVKTRAISL+KAISRILED
Sbjct: 1 MAAMEGIQDQSQQQQQQQAAPPKPAVERLNPAVQQQLNLESVKTRAISLYKAISRILEDI 60
Query: 235 DAIGRTNAVPKWQDILGQFSMVN 303
DA+ R NAVPKWQDILGQFSMVN
Sbjct: 61 DAVARANAVPKWQDILGQFSMVN 83
>emb|CBI18432.3| unnamed protein product [Vitis vinifera]
Length = 558
Score = 118 bits (296), Expect = 7e-25
Identities = 62/83 (74%), Positives = 67/83 (80%), Gaps = 3/83 (3%)
Frame = +1
Query: 64 MAALEGVAMPGVQDQQP---PPARVVERLNPAVQQQLNLDSVKTRAISLFKAISRILEDF 234
MAA+EG+ Q QQ PP VERLNPAVQQQLNL+SVKTRAISL+KAISRILED
Sbjct: 1 MAAMEGIQDQSQQQQQQQAAPPKPAVERLNPAVQQQLNLESVKTRAISLYKAISRILEDI 60
Query: 235 DAIGRTNAVPKWQDILGQFSMVN 303
DA+ R NAVPKWQDILGQFSMVN
Sbjct: 61 DAVARANAVPKWQDILGQFSMVN 83
>gb|EPS63687.1| hypothetical protein M569_11096, partial [Genlisea aurea]
Length = 238
Score = 116 bits (291), Expect = 3e-24
Identities = 59/68 (86%), Positives = 62/68 (91%)
Frame = +1
Query: 100 QDQQPPPARVVERLNPAVQQQLNLDSVKTRAISLFKAISRILEDFDAIGRTNAVPKWQDI 279
QDQQ ARV ERLNPAVQQQLNL+SVKTRA SL++AISRILEDFDAI RTNAVPKWQDI
Sbjct: 1 QDQQQTAARVQERLNPAVQQQLNLESVKTRASSLYRAISRILEDFDAIARTNAVPKWQDI 60
Query: 280 LGQFSMVN 303
LGQFSMVN
Sbjct: 61 LGQFSMVN 68
>ref|XP_006465187.1| PREDICTED: mediator of RNA polymerase II transcription subunit
8-like isoform X3 [Citrus sinensis]
Length = 561
Score = 112 bits (281), Expect = 4e-23
Identities = 61/86 (70%), Positives = 65/86 (75%), Gaps = 6/86 (6%)
Frame = +1
Query: 64 MAALEGVAMPGVQDQQ------PPPARVVERLNPAVQQQLNLDSVKTRAISLFKAISRIL 225
MAA+EGVAM QQ PP VERLN AV QQLNL++VKTRAISLFKAISRIL
Sbjct: 1 MAAMEGVAMQDQSQQQQQQQLVPPQPVAVERLNQAVVQQLNLEAVKTRAISLFKAISRIL 60
Query: 226 EDFDAIGRTNAVPKWQDILGQFSMVN 303
EDFDA RTN PKWQDILGQ+SMVN
Sbjct: 61 EDFDAYARTNTTPKWQDILGQYSMVN 86
>ref|XP_006465185.1| PREDICTED: mediator of RNA polymerase II transcription subunit
8-like isoform X1 [Citrus sinensis]
gi|568821443|ref|XP_006465186.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 8-like isoform
X2 [Citrus sinensis]
Length = 563
Score = 112 bits (281), Expect = 4e-23
Identities = 61/86 (70%), Positives = 65/86 (75%), Gaps = 6/86 (6%)
Frame = +1
Query: 64 MAALEGVAMPGVQDQQ------PPPARVVERLNPAVQQQLNLDSVKTRAISLFKAISRIL 225
MAA+EGVAM QQ PP VERLN AV QQLNL++VKTRAISLFKAISRIL
Sbjct: 1 MAAMEGVAMQDQSQQQQQQQLVPPQPVAVERLNQAVVQQLNLEAVKTRAISLFKAISRIL 60
Query: 226 EDFDAIGRTNAVPKWQDILGQFSMVN 303
EDFDA RTN PKWQDILGQ+SMVN
Sbjct: 61 EDFDAYARTNTTPKWQDILGQYSMVN 86
>ref|XP_006427784.1| hypothetical protein CICLE_v10025265mg [Citrus clementina]
gi|557529774|gb|ESR41024.1| hypothetical protein
CICLE_v10025265mg [Citrus clementina]
Length = 572
Score = 112 bits (279), Expect = 7e-23
Identities = 61/88 (69%), Positives = 65/88 (73%), Gaps = 8/88 (9%)
Frame = +1
Query: 64 MAALEGVAMPGVQDQQ--------PPPARVVERLNPAVQQQLNLDSVKTRAISLFKAISR 219
MAA+EGVAM QQ PP VERLN AV QQLNL++VKTRAISLFKAISR
Sbjct: 1 MAAMEGVAMQDQSQQQQQQQQQLVPPQPVAVERLNQAVVQQLNLEAVKTRAISLFKAISR 60
Query: 220 ILEDFDAIGRTNAVPKWQDILGQFSMVN 303
ILEDFDA RTN PKWQDILGQ+SMVN
Sbjct: 61 ILEDFDAYARTNTTPKWQDILGQYSMVN 88
>ref|XP_006427783.1| hypothetical protein CICLE_v10025265mg [Citrus clementina]
gi|557529773|gb|ESR41023.1| hypothetical protein
CICLE_v10025265mg [Citrus clementina]
Length = 570
Score = 112 bits (279), Expect = 7e-23
Identities = 61/88 (69%), Positives = 65/88 (73%), Gaps = 8/88 (9%)
Frame = +1
Query: 64 MAALEGVAMPGVQDQQ--------PPPARVVERLNPAVQQQLNLDSVKTRAISLFKAISR 219
MAA+EGVAM QQ PP VERLN AV QQLNL++VKTRAISLFKAISR
Sbjct: 1 MAAMEGVAMQDQSQQQQQQQQQLVPPQPVAVERLNQAVVQQLNLEAVKTRAISLFKAISR 60
Query: 220 ILEDFDAIGRTNAVPKWQDILGQFSMVN 303
ILEDFDA RTN PKWQDILGQ+SMVN
Sbjct: 61 ILEDFDAYARTNTTPKWQDILGQYSMVN 88
>ref|XP_002513321.1| conserved hypothetical protein [Ricinus communis]
gi|223547229|gb|EEF48724.1| conserved hypothetical
protein [Ricinus communis]
Length = 549
Score = 108 bits (270), Expect = 7e-22
Identities = 56/71 (78%), Positives = 63/71 (88%), Gaps = 2/71 (2%)
Frame = +1
Query: 97 VQDQQPPPARVV--ERLNPAVQQQLNLDSVKTRAISLFKAISRILEDFDAIGRTNAVPKW 270
+QDQQP ++V ERLNPAVQQQLNL+SVKTRAISLFKAISRILE+FDA R+NA PKW
Sbjct: 2 MQDQQPSAPQMVMAERLNPAVQQQLNLESVKTRAISLFKAISRILEEFDAYARSNANPKW 61
Query: 271 QDILGQFSMVN 303
QDILGQ+SMVN
Sbjct: 62 QDILGQYSMVN 72
>ref|XP_002315372.2| hypothetical protein POPTR_0010s25960g [Populus trichocarpa]
gi|550330638|gb|EEF01543.2| hypothetical protein
POPTR_0010s25960g [Populus trichocarpa]
Length = 551
Score = 108 bits (269), Expect = 1e-21
Identities = 58/82 (70%), Positives = 65/82 (79%), Gaps = 2/82 (2%)
Frame = +1
Query: 64 MAALEGVAMPG--VQDQQPPPARVVERLNPAVQQQLNLDSVKTRAISLFKAISRILEDFD 237
MAA+EGV +Q+QQ V ERLN AVQQQLNL+SVKTRAISLFKA++RILEDFD
Sbjct: 1 MAAMEGVMQDQSQLQNQQQQQMVVPERLNHAVQQQLNLESVKTRAISLFKALTRILEDFD 60
Query: 238 AIGRTNAVPKWQDILGQFSMVN 303
A RTN PKWQDILGQ+SMVN
Sbjct: 61 AYARTNTTPKWQDILGQYSMVN 82
>gb|EMJ23232.1| hypothetical protein PRUPE_ppa003036mg [Prunus persica]
Length = 610
Score = 108 bits (269), Expect = 1e-21
Identities = 57/87 (65%), Positives = 64/87 (73%), Gaps = 3/87 (3%)
Frame = +1
Query: 52 NRTVMAALEGVAM---PGVQDQQPPPARVVERLNPAVQQQLNLDSVKTRAISLFKAISRI 222
++ MAA+EGV P Q QQPP VERLN AVQQQLNL+SVKTRAISLFKAISRI
Sbjct: 29 SQATMAAMEGVVQNQPPQPQQQQPPQPMAVERLNDAVQQQLNLESVKTRAISLFKAISRI 88
Query: 223 LEDFDAIGRTNAVPKWQDILGQFSMVN 303
L+D +A N PKWQDIL Q+SMVN
Sbjct: 89 LDDLNAYAYANTTPKWQDILSQYSMVN 115
>gb|EMJ23231.1| hypothetical protein PRUPE_ppa003036mg [Prunus persica]
Length = 594
Score = 108 bits (269), Expect = 1e-21
Identities = 57/87 (65%), Positives = 64/87 (73%), Gaps = 3/87 (3%)
Frame = +1
Query: 52 NRTVMAALEGVAM---PGVQDQQPPPARVVERLNPAVQQQLNLDSVKTRAISLFKAISRI 222
++ MAA+EGV P Q QQPP VERLN AVQQQLNL+SVKTRAISLFKAISRI
Sbjct: 29 SQATMAAMEGVVQNQPPQPQQQQPPQPMAVERLNDAVQQQLNLESVKTRAISLFKAISRI 88
Query: 223 LEDFDAIGRTNAVPKWQDILGQFSMVN 303
L+D +A N PKWQDIL Q+SMVN
Sbjct: 89 LDDLNAYAYANTTPKWQDILSQYSMVN 115
>ref|XP_006292399.1| hypothetical protein CARUB_v10018612mg [Capsella rubella]
gi|482561106|gb|EOA25297.1| hypothetical protein
CARUB_v10018612mg [Capsella rubella]
Length = 532
Score = 107 bits (267), Expect = 2e-21
Identities = 51/68 (75%), Positives = 61/68 (89%)
Frame = +1
Query: 100 QDQQPPPARVVERLNPAVQQQLNLDSVKTRAISLFKAISRILEDFDAIGRTNAVPKWQDI 279
Q QQPPP VVE+LNP ++++LNL+S+KTRA+SLFKA+SRILEDFDA GRTN PKWQDI
Sbjct: 12 QPQQPPPP-VVEKLNPKLEKELNLESLKTRALSLFKAVSRILEDFDAYGRTNTTPKWQDI 70
Query: 280 LGQFSMVN 303
LGQ+SMVN
Sbjct: 71 LGQYSMVN 78
>ref|XP_004166654.1| PREDICTED: mediator of RNA polymerase II transcription subunit
8-like, partial [Cucumis sativus]
Length = 225
Score = 106 bits (265), Expect = 3e-21
Identities = 55/83 (66%), Positives = 63/83 (75%), Gaps = 3/83 (3%)
Frame = +1
Query: 64 MAALEGVAMPGVQDQQPPPARVV---ERLNPAVQQQLNLDSVKTRAISLFKAISRILEDF 234
MA ++G Q QQP PA+ V ERLN AVQQQLNL+++K RA +LFKAISRILEDF
Sbjct: 1 MATIDGAVQNQPQQQQPLPAQQVVFAERLNQAVQQQLNLEALKNRATTLFKAISRILEDF 60
Query: 235 DAIGRTNAVPKWQDILGQFSMVN 303
D GRTN PKWQDILGQ+SMVN
Sbjct: 61 DVYGRTNTTPKWQDILGQYSMVN 83
>ref|XP_004144418.1| PREDICTED: mediator of RNA polymerase II transcription subunit
8-like [Cucumis sativus]
Length = 546
Score = 106 bits (265), Expect = 3e-21
Identities = 55/83 (66%), Positives = 63/83 (75%), Gaps = 3/83 (3%)
Frame = +1
Query: 64 MAALEGVAMPGVQDQQPPPARVV---ERLNPAVQQQLNLDSVKTRAISLFKAISRILEDF 234
MA ++G Q QQP PA+ V ERLN AVQQQLNL+++K RA +LFKAISRILEDF
Sbjct: 1 MATIDGAVQNQPQQQQPLPAQQVVFAERLNQAVQQQLNLEALKNRATTLFKAISRILEDF 60
Query: 235 DAIGRTNAVPKWQDILGQFSMVN 303
D GRTN PKWQDILGQ+SMVN
Sbjct: 61 DVYGRTNTTPKWQDILGQYSMVN 83
>ref|NP_178407.2| mediator subunit 8 [Arabidopsis thaliana]
gi|75316151|sp|Q4V3C1.1|MED8_ARATH RecName:
Full=Mediator of RNA polymerase II transcription subunit
8; AltName: Full=Protein SETH 10
gi|66792648|gb|AAY56426.1| At2g03070 [Arabidopsis
thaliana] gi|110738571|dbj|BAF01211.1| hypothetical
protein [Arabidopsis thaliana]
gi|330250568|gb|AEC05662.1| mediator subunit 8
[Arabidopsis thaliana]
Length = 524
Score = 106 bits (264), Expect = 4e-21
Identities = 49/68 (72%), Positives = 59/68 (86%)
Frame = +1
Query: 100 QDQQPPPARVVERLNPAVQQQLNLDSVKTRAISLFKAISRILEDFDAIGRTNAVPKWQDI 279
Q QQPPP V E+LNP ++++LNL+S+KTRA+SL KAI+RILEDFDA GRTN PKWQDI
Sbjct: 4 QPQQPPPPPVAEKLNPKLEKELNLESLKTRAVSLAKAIARILEDFDAYGRTNTTPKWQDI 63
Query: 280 LGQFSMVN 303
LGQ+SMVN
Sbjct: 64 LGQYSMVN 71
>gb|AAC32925.1| unknown protein [Arabidopsis thaliana]
Length = 531
Score = 106 bits (264), Expect = 4e-21
Identities = 49/68 (72%), Positives = 59/68 (86%)
Frame = +1
Query: 100 QDQQPPPARVVERLNPAVQQQLNLDSVKTRAISLFKAISRILEDFDAIGRTNAVPKWQDI 279
Q QQPPP V E+LNP ++++LNL+S+KTRA+SL KAI+RILEDFDA GRTN PKWQDI
Sbjct: 4 QPQQPPPPPVAEKLNPKLEKELNLESLKTRAVSLAKAIARILEDFDAYGRTNTTPKWQDI 63
Query: 280 LGQFSMVN 303
LGQ+SMVN
Sbjct: 64 LGQYSMVN 71
>ref|XP_003611429.1| hypothetical protein MTR_5g013930 [Medicago truncatula]
gi|355512764|gb|AES94387.1| hypothetical protein
MTR_5g013930 [Medicago truncatula]
Length = 544
Score = 105 bits (261), Expect = 8e-21
Identities = 56/72 (77%), Positives = 59/72 (81%)
Frame = +1
Query: 88 MPGVQDQQPPPARVVERLNPAVQQQLNLDSVKTRAISLFKAISRILEDFDAIGRTNAVPK 267
M G QQP P + ERLN AVQQQLNL+ VKTRAISLFKAISRILEDFDA GRTN PK
Sbjct: 1 MEGELVQQPQPQQQ-ERLNQAVQQQLNLEQVKTRAISLFKAISRILEDFDAYGRTNTNPK 59
Query: 268 WQDILGQFSMVN 303
WQDILGQ+SMVN
Sbjct: 60 WQDILGQYSMVN 71