BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00029518
         (1057 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001275155.1| single-stranded DNA-binding protein WHY1, ch...   353   6e-95
ref|XP_004238773.1| PREDICTED: single-stranded DNA-bindig protei...   349   1e-93
ref|XP_002277278.1| PREDICTED: uncharacterized protein LOC100253...   336   1e-89
pdb|1L3A|A Chain A, Structure Of The Plant Transcriptional Regul...   335   2e-89
ref|XP_002520128.1| conserved hypothetical protein [Ricinus comm...   332   1e-88
gb|EOY02045.1| SsDNA-binding transcriptional regulator isoform 1...   331   3e-88
ref|XP_002311601.1| hypothetical protein POPTR_0008s14840g [Popu...   325   1e-86
gb|EPS66445.1| hypothetical protein M569_08332, partial [Genlise...   324   3e-86
ref|XP_002892804.1| ATWHY1/PTAC1 [Arabidopsis lyrata subsp. lyra...   320   6e-85
ref|XP_002315793.2| hypothetical protein POPTR_0010s10260g [Popu...   317   7e-84
ref|NP_172893.1| single-stranded DNA-binding protein WHY1 [Arabi...   316   9e-84
ref|XP_006303274.1| hypothetical protein CARUB_v10010024mg [Caps...   315   1e-83
ref|XP_006483225.1| PREDICTED: single-stranded DNA-binding prote...   315   2e-83
ref|XP_006438627.1| hypothetical protein CICLE_v10032427mg [Citr...   315   2e-83
gb|ESW25830.1| hypothetical protein PHAVU_003G068800g [Phaseolus...   313   9e-83
ref|XP_004297331.1| PREDICTED: single-stranded DNA-binding prote...   312   2e-82
ref|XP_006438626.1| hypothetical protein CICLE_v10032427mg [Citr...   311   2e-82
gb|ADL36850.1| WHY domain class transcription factor [Malus dome...   311   2e-82
gb|ESW25829.1| hypothetical protein PHAVU_003G068800g [Phaseolus...   311   3e-82
gb|EMJ23674.1| hypothetical protein PRUPE_ppa009776mg [Prunus pe...   311   4e-82

>ref|NP_001275155.1| single-stranded DNA-binding protein WHY1, chloroplastic [Solanum
           tuberosum] gi|75174555|sp|Q9LL85.1|WHY1_SOLTU RecName:
           Full=Single-stranded DNA-binding protein WHY1,
           chloroplastic; AltName: Full=DNA-binding protein p24;
           AltName: Full=PR-10a binding factor 2; Short=PBF-2;
           AltName: Full=Protein WHIRLY 1; Short=StWhy1; Flags:
           Precursor gi|9651810|gb|AAF91282.1|AF233342_1
           DNA-binding protein p24 [Solanum tuberosum]
          Length = 274

 Score =  353 bits (906), Expect = 6e-95
 Identities = 185/282 (65%), Positives = 218/282 (77%), Gaps = 8/282 (2%)
 Frame = -3

Query: 989 MVNLSLYAAPAGG-GLSVRNPQKLS--SYNSAINTSILFPRTKNAPLF---ATRRGNHSK 828
           M N SL  +P  G  L+++NP K S  S++S+INT I  P + N        T +    +
Sbjct: 1   MSNFSLSPSPTSGFSLNLQNPTKTSYLSFSSSINT-IFAPLSSNTTKSFSGLTHKAALPR 59

Query: 827 SISFNVK-SQYLKPQEPQQKFSTYDTPLSSQP-GQLPPRVYVGYSVYKGKAALTAEPRSP 654
           ++S   + S Y +PQ+ QQ+          QP G   P+V+VGYS+YKGKAALT EPRSP
Sbjct: 60  NLSLTCRHSDYFEPQQQQQQ-------QQQQPQGASTPKVFVGYSIYKGKAALTVEPRSP 112

Query: 653 EFSPLGSGAFKLSKEGFVLLQFAPATGVRQYDWGRKQVFSLSVTEIGNIISLGARDSCEF 474
           EFSPL SGAFKLS+EG V+LQFAPA GVRQYDW RKQVFSLSVTEIG+IISLGA+DSCEF
Sbjct: 113 EFSPLDSGAFKLSREGMVMLQFAPAAGVRQYDWSRKQVFSLSVTEIGSIISLGAKDSCEF 172

Query: 473 FHDPNKGRSDEGKVRKVLKVEPLPDGSGHFFNLSVQNKLANLDESIYIPITKAEFAVLVS 294
           FHDPNKGRSDEG+VRKVLKVEPLPDGSGHFFNLSVQNKL NLDE+IYIP+TKAEFAVLVS
Sbjct: 173 FHDPNKGRSDEGRVRKVLKVEPLPDGSGHFFNLSVQNKLINLDENIYIPVTKAEFAVLVS 232

Query: 293 SFNFIIPYLLGWHTFANTMKPEDANRVNSANPRSSVDFEWNR 168
           +FNF++PYLLGWHT  N+ KPEDA+R N+ANPRS  + EWNR
Sbjct: 233 AFNFVMPYLLGWHTAVNSFKPEDASRSNNANPRSGAELEWNR 274


>ref|XP_004238773.1| PREDICTED: single-stranded DNA-bindig protein WHY1,
           chloroplastic-like [Solanum lycopersicum]
          Length = 268

 Score =  349 bits (895), Expect = 1e-93
 Identities = 184/277 (66%), Positives = 211/277 (76%), Gaps = 7/277 (2%)
 Frame = -3

Query: 977 SLYAAPAGGGLSVRNPQKLSSY---NSAINTSILFPRTKNAPLF---ATRRGNHSKSISF 816
           SL A+PA G     NP K SSY   +S+INT I  P T N        T +    +++S 
Sbjct: 5   SLSASPASG--FSLNPTKTSSYLSFSSSINT-IFAPLTSNTTKSFSGLTYKAALPRNLSL 61

Query: 815 NVK-SQYLKPQEPQQKFSTYDTPLSSQPGQLPPRVYVGYSVYKGKAALTAEPRSPEFSPL 639
             + S Y +PQ+ QQ+            G   P+V+VGYS+YKGKAALT EPRSPEFSPL
Sbjct: 62  TCRHSDYFEPQQQQQQLQ----------GASTPKVFVGYSIYKGKAALTVEPRSPEFSPL 111

Query: 638 GSGAFKLSKEGFVLLQFAPATGVRQYDWGRKQVFSLSVTEIGNIISLGARDSCEFFHDPN 459
            SGAFKLSKEG V+LQFAPA GVRQYDW RKQVFSLSVTEIG+IISLGA+DSCEFFHDPN
Sbjct: 112 DSGAFKLSKEGMVMLQFAPAAGVRQYDWSRKQVFSLSVTEIGSIISLGAKDSCEFFHDPN 171

Query: 458 KGRSDEGKVRKVLKVEPLPDGSGHFFNLSVQNKLANLDESIYIPITKAEFAVLVSSFNFI 279
           KGRSDEG+VRKVLKVEPLPDGSGHFFNLSVQNKL NLDE+IYIP+TKAEFAVLVS+FNF+
Sbjct: 172 KGRSDEGRVRKVLKVEPLPDGSGHFFNLSVQNKLINLDENIYIPVTKAEFAVLVSAFNFV 231

Query: 278 IPYLLGWHTFANTMKPEDANRVNSANPRSSVDFEWNR 168
           +PYLLGWHT  N+ KPEDA+R N+ NPRS  + EWNR
Sbjct: 232 MPYLLGWHTAVNSFKPEDASRSNNTNPRSGAELEWNR 268


>ref|XP_002277278.1| PREDICTED: uncharacterized protein LOC100253653 [Vitis vinifera]
           gi|296086421|emb|CBI32010.3| unnamed protein product
           [Vitis vinifera]
          Length = 268

 Score =  336 bits (861), Expect = 1e-89
 Identities = 168/261 (64%), Positives = 210/261 (80%), Gaps = 2/261 (0%)
 Frame = -3

Query: 944 SVRNPQKLSSYN-SAINTSILFPRTKNAPLFATRRGNHSKSISFNVK-SQYLKPQEPQQK 771
           +++NP+   +++ S++++S     T   PL  +   +  K  S   + S Y + Q   ++
Sbjct: 12  TIQNPRLCPNHSLSSLHSSSPLSFTSRTPLLLSTTRHFRKKRSLQCRQSDYFQQQNITRR 71

Query: 770 FSTYDTPLSSQPGQLPPRVYVGYSVYKGKAALTAEPRSPEFSPLGSGAFKLSKEGFVLLQ 591
               D   SS  G L PRV+VG+S+YKGKAALT EP++PEF+PL SGAFK+SKEGFVLLQ
Sbjct: 72  QPPND---SSFGGALQPRVFVGHSIYKGKAALTVEPKAPEFTPLDSGAFKVSKEGFVLLQ 128

Query: 590 FAPATGVRQYDWGRKQVFSLSVTEIGNIISLGARDSCEFFHDPNKGRSDEGKVRKVLKVE 411
           FAPA GVRQYDWGRKQVFSLSVTEIG++ISLGAR+SCEFFHDP KGRS+EGKVRKVLKVE
Sbjct: 129 FAPAAGVRQYDWGRKQVFSLSVTEIGSLISLGARESCEFFHDPFKGRSEEGKVRKVLKVE 188

Query: 410 PLPDGSGHFFNLSVQNKLANLDESIYIPITKAEFAVLVSSFNFIIPYLLGWHTFANTMKP 231
           PLPDGSGHFFNLSVQNKL N+DE+IYIP+T+AEFAVL+S+FNFI+PYLLGWH +AN++KP
Sbjct: 189 PLPDGSGHFFNLSVQNKLLNMDENIYIPVTRAEFAVLISAFNFIVPYLLGWHAYANSIKP 248

Query: 230 EDANRVNSANPRSSVDFEWNR 168
           +D +RVN+ANPRS  DFEW+R
Sbjct: 249 DDTSRVNNANPRSG-DFEWSR 268


>pdb|1L3A|A Chain A, Structure Of The Plant Transcriptional Regulator Pbf-2
           gi|157878743|pdb|1L3A|B Chain B, Structure Of The Plant
           Transcriptional Regulator Pbf-2 gi|157878744|pdb|1L3A|C
           Chain C, Structure Of The Plant Transcriptional
           Regulator Pbf-2 gi|157878745|pdb|1L3A|D Chain D,
           Structure Of The Plant Transcriptional Regulator Pbf-2
          Length = 227

 Score =  335 bits (858), Expect = 2e-89
 Identities = 162/213 (76%), Positives = 182/213 (85%), Gaps = 1/213 (0%)
 Frame = -3

Query: 806 SQYLKPQEPQQKFSTYDTPLSSQP-GQLPPRVYVGYSVYKGKAALTAEPRSPEFSPLGSG 630
           S Y +PQ+ QQ+          QP G   P+V+VGYS+YKGKAALT EPRSPEFSPL SG
Sbjct: 14  SDYFEPQQQQQQ-------QQQQPQGASTPKVFVGYSIYKGKAALTVEPRSPEFSPLDSG 66

Query: 629 AFKLSKEGFVLLQFAPATGVRQYDWGRKQVFSLSVTEIGNIISLGARDSCEFFHDPNKGR 450
           AFKLS+EG V+LQFAPA GVRQYDW RKQVFSLSVTEIG+IISLG +DSCEFFHDPNKGR
Sbjct: 67  AFKLSREGMVMLQFAPAAGVRQYDWSRKQVFSLSVTEIGSIISLGTKDSCEFFHDPNKGR 126

Query: 449 SDEGKVRKVLKVEPLPDGSGHFFNLSVQNKLANLDESIYIPITKAEFAVLVSSFNFIIPY 270
           SDEG+VRKVLKVEPLPDGSGHFFNLSVQNKL NLDE+IYIP+TKAEFAVLVS+FNF++PY
Sbjct: 127 SDEGRVRKVLKVEPLPDGSGHFFNLSVQNKLINLDENIYIPVTKAEFAVLVSAFNFVMPY 186

Query: 269 LLGWHTFANTMKPEDANRVNSANPRSSVDFEWN 171
           LLGWHT  N+ KPEDA+R N+ANPRS  + EWN
Sbjct: 187 LLGWHTAVNSFKPEDASRSNNANPRSGAELEWN 219


>ref|XP_002520128.1| conserved hypothetical protein [Ricinus communis]
           gi|223540620|gb|EEF42183.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 271

 Score =  332 bits (852), Expect = 1e-88
 Identities = 167/259 (64%), Positives = 199/259 (76%), Gaps = 4/259 (1%)
 Frame = -3

Query: 932 PQKLSSYNSAINTSILFPRTKNAPLFATRRGNHS----KSISFNVKSQYLKPQEPQQKFS 765
           P   SS  S   TS  F  T +AP   +   N +    +S  ++ + Q   P  P    S
Sbjct: 17  PNTFSSLQSFRTTSTTFIHTISAPRRLSTNTNRAVKCRQSEFYDQQQQKYNPSRP----S 72

Query: 764 TYDTPLSSQPGQLPPRVYVGYSVYKGKAALTAEPRSPEFSPLGSGAFKLSKEGFVLLQFA 585
           + D+  +SQ     PRVYVG+S+YKGKAALT EPR+PEF+ L SGAFK+++EGFVLLQFA
Sbjct: 73  SNDSSFASQSPAAVPRVYVGHSIYKGKAALTVEPRAPEFAALDSGAFKVAREGFVLLQFA 132

Query: 584 PATGVRQYDWGRKQVFSLSVTEIGNIISLGARDSCEFFHDPNKGRSDEGKVRKVLKVEPL 405
           PA GVRQYDW RKQVFSLSVTEIG IISLGARDSCEFFHDPNKG+SDEGK+RKVLKVEPL
Sbjct: 133 PAAGVRQYDWSRKQVFSLSVTEIGTIISLGARDSCEFFHDPNKGKSDEGKIRKVLKVEPL 192

Query: 404 PDGSGHFFNLSVQNKLANLDESIYIPITKAEFAVLVSSFNFIIPYLLGWHTFANTMKPED 225
           PDGSGHFFNLSVQNK  N+DESIYIP+TKAEFAVL+S+FN+I+PYLLGWHTFAN++KP+ 
Sbjct: 193 PDGSGHFFNLSVQNKPMNMDESIYIPVTKAEFAVLISAFNYILPYLLGWHTFANSIKPDL 252

Query: 224 ANRVNSANPRSSVDFEWNR 168
              +N+ANPR   D+EW+R
Sbjct: 253 NGHMNNANPRFGGDYEWSR 271


>gb|EOY02045.1| SsDNA-binding transcriptional regulator isoform 1 [Theobroma cacao]
          Length = 270

 Score =  331 bits (848), Expect = 3e-88
 Identities = 168/260 (64%), Positives = 200/260 (76%), Gaps = 5/260 (1%)
 Frame = -3

Query: 932 PQKLSSYNSAINTSIL--FPRTKNAPLFATRRGNHS---KSISFNVKSQYLKPQEPQQKF 768
           P    S N   NT++L  F   K+    A +    S   K   F++K +  +  + QQ+F
Sbjct: 11  PLSAQSLNPNSNTNLLSSFSSLKSTQTHAFKLNPLSLTPKPSKFSLKCRQSEYFDQQQRF 70

Query: 767 STYDTPLSSQPGQLPPRVYVGYSVYKGKAALTAEPRSPEFSPLGSGAFKLSKEGFVLLQF 588
           S   +  S     LPPR YVG+SVYKGKAALT EPR+PEF PL SGAFK+S+EGFVLLQF
Sbjct: 71  SNSSSTASPPASGLPPRFYVGHSVYKGKAALTVEPRAPEFVPLDSGAFKISREGFVLLQF 130

Query: 587 APATGVRQYDWGRKQVFSLSVTEIGNIISLGARDSCEFFHDPNKGRSDEGKVRKVLKVEP 408
           APA GVRQYDW RKQVFSLSVTEIG +ISLGAR+SCEFFHDP KG+S+EGKVRKVLKVEP
Sbjct: 131 APAAGVRQYDWSRKQVFSLSVTEIGALISLGARESCEFFHDPFKGKSEEGKVRKVLKVEP 190

Query: 407 LPDGSGHFFNLSVQNKLANLDESIYIPITKAEFAVLVSSFNFIIPYLLGWHTFANTMKPE 228
           LPDGSGHFFNL VQN+L NLDE+IYIPIT+AEF VL S+F+FI+PYLLGWH FAN++KPE
Sbjct: 191 LPDGSGHFFNLGVQNRLLNLDENIYIPITRAEFTVLNSAFSFILPYLLGWHAFANSIKPE 250

Query: 227 DANRVNSANPRSSVDFEWNR 168
           +A+RVN+ANPR   D+EW+R
Sbjct: 251 EASRVNNANPRYGGDYEWSR 270


>ref|XP_002311601.1| hypothetical protein POPTR_0008s14840g [Populus trichocarpa]
           gi|118485247|gb|ABK94483.1| unknown [Populus
           trichocarpa] gi|222851421|gb|EEE88968.1| hypothetical
           protein POPTR_0008s14840g [Populus trichocarpa]
          Length = 265

 Score =  325 bits (834), Expect = 1e-86
 Identities = 161/261 (61%), Positives = 202/261 (77%), Gaps = 2/261 (0%)
 Frame = -3

Query: 944 SVRNPQK-LSSYNSAINTSILFPRTKNAPLFATRRGNHSKSISFNVKSQYLKPQEPQQKF 768
           S +NP+  L  YNS  +T  +   +K +        +  K  +  VK QY   Q      
Sbjct: 13  SPQNPKLWLPQYNSLCSTKSISLNSKTS--------STEKKKTLGVKCQYYDQQHKTFTT 64

Query: 767 STYDTPLSSQP-GQLPPRVYVGYSVYKGKAALTAEPRSPEFSPLGSGAFKLSKEGFVLLQ 591
           S+  +P S+ P G+ PP+V+VG+S+YKGKAALT EPRSPEFSPL SGA+KL KEGFVLLQ
Sbjct: 65  SSRSSPSSAPPVGESPPKVFVGHSIYKGKAALTVEPRSPEFSPLDSGAYKLVKEGFVLLQ 124

Query: 590 FAPATGVRQYDWGRKQVFSLSVTEIGNIISLGARDSCEFFHDPNKGRSDEGKVRKVLKVE 411
           FAPA  VRQYDW RKQVFSLSVTEIG+++SL A+ SCEFFHDPNKG+SDEGKVRK+LKVE
Sbjct: 125 FAPAASVRQYDWTRKQVFSLSVTEIGHLVSLDAKGSCEFFHDPNKGKSDEGKVRKLLKVE 184

Query: 410 PLPDGSGHFFNLSVQNKLANLDESIYIPITKAEFAVLVSSFNFIIPYLLGWHTFANTMKP 231
           PLPDGSGHFFNLSVQNK+ N+DE+IYIP+TKAE+ VL S+FN+I+PYLLGWH +AN++KP
Sbjct: 185 PLPDGSGHFFNLSVQNKVLNIDENIYIPVTKAEYTVLTSAFNYILPYLLGWHAYANSIKP 244

Query: 230 EDANRVNSANPRSSVDFEWNR 168
           +D++R N+A+PR   D+EW+R
Sbjct: 245 DDSSRGNNASPRYGGDYEWSR 265


>gb|EPS66445.1| hypothetical protein M569_08332, partial [Genlisea aurea]
          Length = 187

 Score =  324 bits (831), Expect = 3e-86
 Identities = 157/189 (83%), Positives = 173/189 (91%)
 Frame = -3

Query: 734 GQLPPRVYVGYSVYKGKAALTAEPRSPEFSPLGSGAFKLSKEGFVLLQFAPATGVRQYDW 555
           GQLPPRVY GYSVYKGKAA+T EPR PEFS LGSGAFK+SKEGFVLLQFAPA G RQYDW
Sbjct: 1   GQLPPRVYAGYSVYKGKAAITVEPRPPEFSSLGSGAFKVSKEGFVLLQFAPAVGSRQYDW 60

Query: 554 GRKQVFSLSVTEIGNIISLGARDSCEFFHDPNKGRSDEGKVRKVLKVEPLPDGSGHFFNL 375
            RKQ+FSLSVTEIGNIISLGARDSCEFFHDPNKG+SDEG+VRKVLKVEPLPDGSGHFFNL
Sbjct: 61  TRKQIFSLSVTEIGNIISLGARDSCEFFHDPNKGKSDEGRVRKVLKVEPLPDGSGHFFNL 120

Query: 374 SVQNKLANLDESIYIPITKAEFAVLVSSFNFIIPYLLGWHTFANTMKPEDANRVNSANPR 195
           SVQNK+ N+DESIYIPIT+AEFAVLVSS NFI+PYLLGWH FA+++KPED++   S N R
Sbjct: 121 SVQNKITNVDESIYIPITRAEFAVLVSSLNFIVPYLLGWHAFASSVKPEDSSSTRS-NSR 179

Query: 194 SSVDFEWNR 168
            +VDFEW+R
Sbjct: 180 -TVDFEWSR 187


>ref|XP_002892804.1| ATWHY1/PTAC1 [Arabidopsis lyrata subsp. lyrata]
           gi|297338646|gb|EFH69063.1| ATWHY1/PTAC1 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 264

 Score =  320 bits (820), Expect = 6e-85
 Identities = 164/263 (62%), Positives = 201/263 (76%), Gaps = 9/263 (3%)
 Frame = -3

Query: 929 QKLSSYNSAINTSILFPRTKNAPL---FATRRGNHS-----KSIS-FNVKSQYLKPQEPQ 777
           Q LSS   A+N++  F  + +  +   FA +R   +     K++  F+VKS+     E +
Sbjct: 3   QLLSSPPIAVNSNSRFLSSSSVLVAGGFAVKRHGFALKPTTKTVKLFSVKSRQTDYFE-K 61

Query: 776 QKFSTYDTPLSSQPGQLPPRVYVGYSVYKGKAALTAEPRSPEFSPLGSGAFKLSKEGFVL 597
           Q+F    +  S     LP R YVG+S+YKGKAALT EPR+PEF  L SGAFKLSK+GF+L
Sbjct: 62  QRFGDSSSSSSQNAEGLPARFYVGHSIYKGKAALTMEPRAPEFVALDSGAFKLSKDGFLL 121

Query: 596 LQFAPATGVRQYDWGRKQVFSLSVTEIGNIISLGARDSCEFFHDPNKGRSDEGKVRKVLK 417
           LQFAP+ GVRQYDW +KQVFSLSVTEIG ++SLG R+SCEFFHDP KG+SDEGKVRKVLK
Sbjct: 122 LQFAPSAGVRQYDWSKKQVFSLSVTEIGTLVSLGPRESCEFFHDPFKGKSDEGKVRKVLK 181

Query: 416 VEPLPDGSGHFFNLSVQNKLANLDESIYIPITKAEFAVLVSSFNFIIPYLLGWHTFANTM 237
           VEPLPDGSGHFFNLSVQNKL N+DESIYIPIT+AEFAVL+S+FNF++PYL+GWH FAN++
Sbjct: 182 VEPLPDGSGHFFNLSVQNKLVNVDESIYIPITRAEFAVLISAFNFVLPYLIGWHAFANSI 241

Query: 236 KPEDANRVNSANPRSSVDFEWNR 168
           KPED NR N+A P    D+EWNR
Sbjct: 242 KPEDTNRANNAPPNYGGDYEWNR 264


>ref|XP_002315793.2| hypothetical protein POPTR_0010s10260g [Populus trichocarpa]
           gi|550329499|gb|EEF01964.2| hypothetical protein
           POPTR_0010s10260g [Populus trichocarpa]
          Length = 271

 Score =  317 bits (811), Expect = 7e-84
 Identities = 154/233 (66%), Positives = 188/233 (80%), Gaps = 5/233 (2%)
 Frame = -3

Query: 851 TRRGNHSKSISFNVKSQYLKPQEPQQKFSTYDTPLSSQP---GQLPPRVYVGYSVYKGKA 681
           ++  N  K    +VK QY   Q  Q+ F++   P SS     G+ PP+V+VG+S+YKGKA
Sbjct: 41  SKTSNTKKKKKLSVKYQYYDHQ--QKSFTSSSRPSSSSAPPVGESPPKVFVGHSIYKGKA 98

Query: 680 ALTAEPRSPEFSPLGSGAFKLSKEGFVLLQFAPATGVRQYDWGRKQVFSLSVTEIGNIIS 501
           ALT EPR+PEFSPL SGA+KL KEGFVL QFAPA+  RQYDW RKQVFSLSVTEIG+++S
Sbjct: 99  ALTIEPRAPEFSPLESGAYKLVKEGFVLSQFAPASSARQYDWTRKQVFSLSVTEIGHLVS 158

Query: 500 LGARDSCEFFHDPNKGRSDEGKVRKVLKVEPLPDGSGHFFNLSVQNKLANLDESIYIPIT 321
           LGARDSCEFFHDPNKGRS+EGKVRKVLKVEPLPDGSGHFFNLSVQNK  N+DESIYIP+T
Sbjct: 159 LGARDSCEFFHDPNKGRSEEGKVRKVLKVEPLPDGSGHFFNLSVQNKALNIDESIYIPVT 218

Query: 320 KAEFAVLVSSFNFIIPYLLGWHTF--ANTMKPEDANRVNSANPRSSVDFEWNR 168
           +AE+ VL+S+FN+I+PYLLGWH +  AN++K  D++R N+ NPR   D++WNR
Sbjct: 219 RAEYTVLISAFNYILPYLLGWHAYANANSIKSADSSRENNVNPRYGGDYDWNR 271


>ref|NP_172893.1| single-stranded DNA-binding protein WHY1 [Arabidopsis thaliana]
           gi|75191428|sp|Q9M9S3.1|WHY1_ARATH RecName:
           Full=Single-stranded DNA-binding protein WHY1,
           chloroplastic; AltName: Full=Protein PLASTID
           TRANSCRIPTIONALLY ACTIVE 1; AltName: Full=Protein WHIRLY
           1; Short=AtWHY1; Flags: Precursor
           gi|7262683|gb|AAF43941.1|AC012188_18 Contains similarity
           to a hypothetical protein from Arabidopsis thaliana
           gb|AC002521.2. EST gb|AI995686 comes from this gene
           [Arabidopsis thaliana]
           gi|12083312|gb|AAG48815.1|AF332452_1 putative
           DNA-binding protein p24 [Arabidopsis thaliana]
           gi|13877787|gb|AAK43971.1|AF370156_1 putative
           DNA-binding protein p24 [Arabidopsis thaliana]
           gi|16323418|gb|AAL15203.1| putative DNA-binding protein
           p24 [Arabidopsis thaliana] gi|332191039|gb|AEE29160.1|
           ssDNA-binding transcriptional regulator [Arabidopsis
           thaliana]
          Length = 263

 Score =  316 bits (810), Expect = 9e-84
 Identities = 153/218 (70%), Positives = 185/218 (84%), Gaps = 1/218 (0%)
 Frame = -3

Query: 818 FNVKSQYLKPQEPQQKFSTYDTPLSSQPGQ-LPPRVYVGYSVYKGKAALTAEPRSPEFSP 642
           F+VKS+     E +Q+F   D+  S  P + LP R YVG+S+YKGKAALT +PR+PEF  
Sbjct: 49  FSVKSRQTDYFE-KQRFG--DSSSSPSPAEGLPARFYVGHSIYKGKAALTVDPRAPEFVA 105

Query: 641 LGSGAFKLSKEGFVLLQFAPATGVRQYDWGRKQVFSLSVTEIGNIISLGARDSCEFFHDP 462
           L SGAFKLSK+GF+LLQFAP+ GVRQYDW +KQVFSLSVTEIG ++SLG R+SCEFFHDP
Sbjct: 106 LDSGAFKLSKDGFLLLQFAPSAGVRQYDWSKKQVFSLSVTEIGTLVSLGPRESCEFFHDP 165

Query: 461 NKGRSDEGKVRKVLKVEPLPDGSGHFFNLSVQNKLANLDESIYIPITKAEFAVLVSSFNF 282
            KG+SDEGKVRKVLKVEPLPDGSGHFFNLSVQNKL N+DESIYIPIT+AEFAVL+S+FNF
Sbjct: 166 FKGKSDEGKVRKVLKVEPLPDGSGHFFNLSVQNKLVNVDESIYIPITRAEFAVLISAFNF 225

Query: 281 IIPYLLGWHTFANTMKPEDANRVNSANPRSSVDFEWNR 168
           ++PYL+GWH FAN++KPE+ +RVN+A+P    D+EWNR
Sbjct: 226 VLPYLIGWHAFANSIKPEETSRVNNASPNYGGDYEWNR 263


>ref|XP_006303274.1| hypothetical protein CARUB_v10010024mg [Capsella rubella]
           gi|482571985|gb|EOA36172.1| hypothetical protein
           CARUB_v10010024mg [Capsella rubella]
          Length = 266

 Score =  315 bits (808), Expect = 1e-83
 Identities = 151/223 (67%), Positives = 187/223 (83%), Gaps = 2/223 (0%)
 Frame = -3

Query: 830 KSISFNVKSQYLKPQEPQQKFSTYDTP-LSSQPGQ-LPPRVYVGYSVYKGKAALTAEPRS 657
           K++  +VKS+     E Q+   +  +P  SSQ  +  P R YVG+S+YKGKAALT EPR+
Sbjct: 44  KTVKLSVKSRQTDYFEKQRFGDSSSSPSYSSQNAEGSPARFYVGHSIYKGKAALTVEPRA 103

Query: 656 PEFSPLGSGAFKLSKEGFVLLQFAPATGVRQYDWGRKQVFSLSVTEIGNIISLGARDSCE 477
           PEF  L SGAFKLSK+GF+LLQFAP+ GVRQYDW +KQVFSLSVTEIG ++SLG ++SCE
Sbjct: 104 PEFVALDSGAFKLSKDGFLLLQFAPSAGVRQYDWSKKQVFSLSVTEIGTLVSLGPKESCE 163

Query: 476 FFHDPNKGRSDEGKVRKVLKVEPLPDGSGHFFNLSVQNKLANLDESIYIPITKAEFAVLV 297
           FFHDP KG+SDEGKVRKVLKVEPLPDGSGHFFNLSVQNKL N+D++IYIPIT+AEFAVL+
Sbjct: 164 FFHDPFKGKSDEGKVRKVLKVEPLPDGSGHFFNLSVQNKLLNVDDNIYIPITRAEFAVLI 223

Query: 296 SSFNFIIPYLLGWHTFANTMKPEDANRVNSANPRSSVDFEWNR 168
           S+FNF++PYL+GWH FAN++KPED+NR+N+A+P    D+EWNR
Sbjct: 224 SAFNFVLPYLIGWHAFANSIKPEDSNRMNNASPNYGGDYEWNR 266


>ref|XP_006483225.1| PREDICTED: single-stranded DNA-binding protein WHY1,
           chloroplastic-like [Citrus sinensis]
          Length = 267

 Score =  315 bits (807), Expect = 2e-83
 Identities = 155/231 (67%), Positives = 185/231 (80%), Gaps = 9/231 (3%)
 Frame = -3

Query: 833 SKSISFNVKSQYLKPQEP----QQKFSTYDTPLSSQP-----GQLPPRVYVGYSVYKGKA 681
           ++S S   K  Y+K ++     Q+ FS   +  S  P     G LP RVYVG+S+YKGKA
Sbjct: 37  TESTSIKKKKLYVKCRQSEYYEQKSFSASPSNSSYAPTDVAVGTLPTRVYVGHSIYKGKA 96

Query: 680 ALTAEPRSPEFSPLGSGAFKLSKEGFVLLQFAPATGVRQYDWGRKQVFSLSVTEIGNIIS 501
           ALT EPR PEF  L SGA KLS+EGFV+LQFAPA GVRQYDW RKQVFSLSVTEIG++++
Sbjct: 97  ALTVEPRGPEFVSLDSGAVKLSREGFVMLQFAPAAGVRQYDWSRKQVFSLSVTEIGSLVA 156

Query: 500 LGARDSCEFFHDPNKGRSDEGKVRKVLKVEPLPDGSGHFFNLSVQNKLANLDESIYIPIT 321
           LGAR+SCEFFHDP KG+S+EGKVRKVLKVEPLPDGSGHFFNLSVQNKL NLDESIYIP+T
Sbjct: 157 LGARESCEFFHDPFKGKSEEGKVRKVLKVEPLPDGSGHFFNLSVQNKLINLDESIYIPVT 216

Query: 320 KAEFAVLVSSFNFIIPYLLGWHTFANTMKPEDANRVNSANPRSSVDFEWNR 168
           +AE+ VLVS+FNFI+PYLLGWH +A+T++ +D  R N+ANPR   D+EWNR
Sbjct: 217 RAEYTVLVSAFNFILPYLLGWHAYASTIRADDTARTNNANPRYGGDYEWNR 267


>ref|XP_006438627.1| hypothetical protein CICLE_v10032427mg [Citrus clementina]
           gi|557540823|gb|ESR51867.1| hypothetical protein
           CICLE_v10032427mg [Citrus clementina]
          Length = 267

 Score =  315 bits (807), Expect = 2e-83
 Identities = 155/231 (67%), Positives = 185/231 (80%), Gaps = 9/231 (3%)
 Frame = -3

Query: 833 SKSISFNVKSQYLKPQEP----QQKFSTYDTPLSSQP-----GQLPPRVYVGYSVYKGKA 681
           ++S S   K  Y+K ++     Q+ FS   +  S  P     G LP RVYVG+S+YKGKA
Sbjct: 37  TESTSIKKKKLYVKCRQSEYYEQKSFSASPSNSSYAPTDVAVGTLPTRVYVGHSIYKGKA 96

Query: 680 ALTAEPRSPEFSPLGSGAFKLSKEGFVLLQFAPATGVRQYDWGRKQVFSLSVTEIGNIIS 501
           ALT EPR PEF  L SGA KLS+EGFV+LQFAPA GVRQYDW RKQVFSLSVTEIG++++
Sbjct: 97  ALTVEPRGPEFVSLDSGAVKLSREGFVMLQFAPAAGVRQYDWSRKQVFSLSVTEIGSLVA 156

Query: 500 LGARDSCEFFHDPNKGRSDEGKVRKVLKVEPLPDGSGHFFNLSVQNKLANLDESIYIPIT 321
           LGAR+SCEFFHDP KG+S+EGKVRKVLKVEPLPDGSGHFFNLSVQNKL NLDESIYIP+T
Sbjct: 157 LGARESCEFFHDPFKGKSEEGKVRKVLKVEPLPDGSGHFFNLSVQNKLINLDESIYIPVT 216

Query: 320 KAEFAVLVSSFNFIIPYLLGWHTFANTMKPEDANRVNSANPRSSVDFEWNR 168
           +AE+ VLVS+FNFI+PYLLGWH +A+T++ +D  R N+ANPR   D+EWNR
Sbjct: 217 RAEYTVLVSAFNFILPYLLGWHAYASTIRADDTARTNNANPRYGGDYEWNR 267


>gb|ESW25830.1| hypothetical protein PHAVU_003G068800g [Phaseolus vulgaris]
          Length = 262

 Score =  313 bits (801), Expect = 9e-83
 Identities = 164/267 (61%), Positives = 191/267 (71%), Gaps = 12/267 (4%)
 Frame = -3

Query: 932 PQKLSSYNSAINTSILFPRTKNAPLFATRRGNHSKSISFNVKSQYLKPQEP--------- 780
           P  LSS +S  ++S          LFA    NHS    F+ KS    P +P         
Sbjct: 12  PSMLSSLSSLSSSS--------PKLFA----NHS----FSPKSLPFNPPKPFSLRCRHSD 55

Query: 779 ---QQKFSTYDTPLSSQPGQLPPRVYVGYSVYKGKAALTAEPRSPEFSPLGSGAFKLSKE 609
              Q   ++   P       LPPRVYVGYS+YKGKAALT  PR PEF PL SGA+K+SKE
Sbjct: 56  LFDQNTLASSQRPTRPTASALPPRVYVGYSIYKGKAALTLTPRPPEFVPLDSGAYKISKE 115

Query: 608 GFVLLQFAPATGVRQYDWGRKQVFSLSVTEIGNIISLGARDSCEFFHDPNKGRSDEGKVR 429
           G+VLLQFAPA G RQYDW RKQVFSLSV E+G++ISLG R+S EFFHDP KG+SDEGKVR
Sbjct: 116 GYVLLQFAPAVGTRQYDWNRKQVFSLSVGEMGSVISLGTRESFEFFHDPFKGKSDEGKVR 175

Query: 428 KVLKVEPLPDGSGHFFNLSVQNKLANLDESIYIPITKAEFAVLVSSFNFIIPYLLGWHTF 249
           K+LK+EPLPDGSGH FNLSVQNKL N+DE+IYIPITKAE AVL S+FNFI+PYLLGWHTF
Sbjct: 176 KILKLEPLPDGSGHLFNLSVQNKLVNVDENIYIPITKAELAVLTSTFNFIMPYLLGWHTF 235

Query: 248 ANTMKPEDANRVNSANPRSSVDFEWNR 168
           AN++KPED +  N+ANPR   D+EWNR
Sbjct: 236 ANSIKPEDTSGGNNANPRYGGDYEWNR 262


>ref|XP_004297331.1| PREDICTED: single-stranded DNA-binding protein WHY1,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 270

 Score =  312 bits (799), Expect = 2e-82
 Identities = 154/261 (59%), Positives = 195/261 (74%), Gaps = 1/261 (0%)
 Frame = -3

Query: 947 LSVRNPQKLSSYNSAINTSILFPRTKNAPLFATRR-GNHSKSISFNVKSQYLKPQEPQQK 771
           ++V+NP    S  + + ++  F    N+  F  RR     +   +  + +   P  P   
Sbjct: 12  VAVQNPNHSVSSKARVFSTNSFGFAPNSTSFRKRRLALKCRQSEYFDQQRLTAPNPPSTA 71

Query: 770 FSTYDTPLSSQPGQLPPRVYVGYSVYKGKAALTAEPRSPEFSPLGSGAFKLSKEGFVLLQ 591
            S   +P  +  G  P R YVG+S+YKGKAALT EP++PEF+ L SGAFK+S+EGFVLLQ
Sbjct: 72  ASAPQSPAGASAG--PARFYVGHSIYKGKAALTVEPKAPEFTALDSGAFKMSREGFVLLQ 129

Query: 590 FAPATGVRQYDWGRKQVFSLSVTEIGNIISLGARDSCEFFHDPNKGRSDEGKVRKVLKVE 411
           FAPA GVR YDW RKQVFSLSVTEIG+I+SLGA++SCEFFHDP KG+S+EGKVRKVLKVE
Sbjct: 130 FAPAAGVRVYDWSRKQVFSLSVTEIGSIVSLGAKESCEFFHDPFKGKSEEGKVRKVLKVE 189

Query: 410 PLPDGSGHFFNLSVQNKLANLDESIYIPITKAEFAVLVSSFNFIIPYLLGWHTFANTMKP 231
           PLPDGSG FFNLSVQNKL NLDE+IYIP+T+AEFAVL S+FN+++PYL+GWH + N++KP
Sbjct: 190 PLPDGSGRFFNLSVQNKLINLDENIYIPVTRAEFAVLNSAFNYLLPYLIGWHAYVNSVKP 249

Query: 230 EDANRVNSANPRSSVDFEWNR 168
           ED +RVN+A PR   DFEW+R
Sbjct: 250 EDMSRVNNATPRYGGDFEWSR 270


>ref|XP_006438626.1| hypothetical protein CICLE_v10032427mg [Citrus clementina]
           gi|557540822|gb|ESR51866.1| hypothetical protein
           CICLE_v10032427mg [Citrus clementina]
          Length = 193

 Score =  311 bits (798), Expect = 2e-82
 Identities = 145/189 (76%), Positives = 168/189 (88%)
 Frame = -3

Query: 734 GQLPPRVYVGYSVYKGKAALTAEPRSPEFSPLGSGAFKLSKEGFVLLQFAPATGVRQYDW 555
           G LP RVYVG+S+YKGKAALT EPR PEF  L SGA KLS+EGFV+LQFAPA GVRQYDW
Sbjct: 5   GTLPTRVYVGHSIYKGKAALTVEPRGPEFVSLDSGAVKLSREGFVMLQFAPAAGVRQYDW 64

Query: 554 GRKQVFSLSVTEIGNIISLGARDSCEFFHDPNKGRSDEGKVRKVLKVEPLPDGSGHFFNL 375
            RKQVFSLSVTEIG++++LGAR+SCEFFHDP KG+S+EGKVRKVLKVEPLPDGSGHFFNL
Sbjct: 65  SRKQVFSLSVTEIGSLVALGARESCEFFHDPFKGKSEEGKVRKVLKVEPLPDGSGHFFNL 124

Query: 374 SVQNKLANLDESIYIPITKAEFAVLVSSFNFIIPYLLGWHTFANTMKPEDANRVNSANPR 195
           SVQNKL NLDESIYIP+T+AE+ VLVS+FNFI+PYLLGWH +A+T++ +D  R N+ANPR
Sbjct: 125 SVQNKLINLDESIYIPVTRAEYTVLVSAFNFILPYLLGWHAYASTIRADDTARTNNANPR 184

Query: 194 SSVDFEWNR 168
              D+EWNR
Sbjct: 185 YGGDYEWNR 193


>gb|ADL36850.1| WHY domain class transcription factor [Malus domestica]
          Length = 276

 Score =  311 bits (798), Expect = 2e-82
 Identities = 165/286 (57%), Positives = 206/286 (72%), Gaps = 12/286 (4%)
 Frame = -3

Query: 989 MVNLSLYAAPAGGGLSVRNPQKLSSYNSAINTSILFPRTKNAPLFATRRGNHSKSISFNV 810
           M+ L L ++PA      +NP +  S       S L  R +   +F+T     + S   + 
Sbjct: 1   MLRLHLLSSPATAQKPNQNPSQFLS-------SQLLSRAR---VFSTNTFGFAPSPILSR 50

Query: 809 KSQYLKPQEP----QQKFSTYDTPLSSQPGQ--------LPPRVYVGYSVYKGKAALTAE 666
           K   LK ++     QQ+ ST  +P    P          + PR YVG+S+YKGKAALT E
Sbjct: 51  KRLSLKCRQSEYFDQQRTSTAASPNKPSPAPPTPAGATGMAPRFYVGHSIYKGKAALTVE 110

Query: 665 PRSPEFSPLGSGAFKLSKEGFVLLQFAPATGVRQYDWGRKQVFSLSVTEIGNIISLGARD 486
           P++PEF+PL SGAFKLS+EGFVLLQFAPA GVR YDW RKQVFSLSVTEIG+++SLG+++
Sbjct: 111 PKAPEFTPLDSGAFKLSREGFVLLQFAPAAGVRVYDWSRKQVFSLSVTEIGSLVSLGSKE 170

Query: 485 SCEFFHDPNKGRSDEGKVRKVLKVEPLPDGSGHFFNLSVQNKLANLDESIYIPITKAEFA 306
           S EFFHDP KG+SDEGKVRKVLKVEPLPDGSGHFFNLSVQNKL NLDESIYIPIT+AEFA
Sbjct: 171 SLEFFHDPFKGKSDEGKVRKVLKVEPLPDGSGHFFNLSVQNKLINLDESIYIPITRAEFA 230

Query: 305 VLVSSFNFIIPYLLGWHTFANTMKPEDANRVNSANPRSSVDFEWNR 168
           VL S+FNFI+PY+LGWH +AN++KPED++R N++  +   DFEW+R
Sbjct: 231 VLKSAFNFILPYILGWHAYANSIKPEDSSRANNSGLKYGGDFEWSR 276


>gb|ESW25829.1| hypothetical protein PHAVU_003G068800g [Phaseolus vulgaris]
          Length = 264

 Score =  311 bits (797), Expect = 3e-82
 Identities = 164/265 (61%), Positives = 191/265 (72%), Gaps = 10/265 (3%)
 Frame = -3

Query: 932 PQKLSSYNSAINTSILFPRTKNAPLFATRRGNHS---KSISFNVKSQYLKPQEPQQKFST 762
           P  LSS +S  ++S          LFA    NHS   KS+ FN    +         F  
Sbjct: 12  PSMLSSLSSLSSSS--------PKLFA----NHSFSPKSLPFNPPKPFSLRCRHSDLFDQ 59

Query: 761 YDTPLSSQPGQ-------LPPRVYVGYSVYKGKAALTAEPRSPEFSPLGSGAFKLSKEGF 603
                S +P +       LPPRVYVGYS+YKGKAALT  PR PEF PL SGA+K+SKEG+
Sbjct: 60  NTLASSQRPTRPTASVAALPPRVYVGYSIYKGKAALTLTPRPPEFVPLDSGAYKISKEGY 119

Query: 602 VLLQFAPATGVRQYDWGRKQVFSLSVTEIGNIISLGARDSCEFFHDPNKGRSDEGKVRKV 423
           VLLQFAPA G RQYDW RKQVFSLSV E+G++ISLG R+S EFFHDP KG+SDEGKVRK+
Sbjct: 120 VLLQFAPAVGTRQYDWNRKQVFSLSVGEMGSVISLGTRESFEFFHDPFKGKSDEGKVRKI 179

Query: 422 LKVEPLPDGSGHFFNLSVQNKLANLDESIYIPITKAEFAVLVSSFNFIIPYLLGWHTFAN 243
           LK+EPLPDGSGH FNLSVQNKL N+DE+IYIPITKAE AVL S+FNFI+PYLLGWHTFAN
Sbjct: 180 LKLEPLPDGSGHLFNLSVQNKLVNVDENIYIPITKAELAVLTSTFNFIMPYLLGWHTFAN 239

Query: 242 TMKPEDANRVNSANPRSSVDFEWNR 168
           ++KPED +  N+ANPR   D+EWNR
Sbjct: 240 SIKPEDTSGGNNANPRYGGDYEWNR 264


>gb|EMJ23674.1| hypothetical protein PRUPE_ppa009776mg [Prunus persica]
          Length = 278

 Score =  311 bits (796), Expect = 4e-82
 Identities = 155/249 (62%), Positives = 193/249 (77%), Gaps = 13/249 (5%)
 Frame = -3

Query: 875 TKNAPLFATRRGNHSKSISFNVKSQYLKPQEP----QQKFSTYDTPLSSQPGQ------- 729
           +  A +F+T     + S+S + K   LK ++     QQ+ ST   P    P         
Sbjct: 30  SSRARVFSTNSFGFAPSLSSSRKRLSLKCRQSEYFDQQRASTASAPNKPSPPAPQTPAGG 89

Query: 728 --LPPRVYVGYSVYKGKAALTAEPRSPEFSPLGSGAFKLSKEGFVLLQFAPATGVRQYDW 555
             LPPR +VG+S+YKGKAALT EP++PEF+ L SGAFKLS+EGFVLLQFAPA GVR YDW
Sbjct: 90  TGLPPRFFVGHSIYKGKAALTVEPKAPEFTALDSGAFKLSREGFVLLQFAPAAGVRVYDW 149

Query: 554 GRKQVFSLSVTEIGNIISLGARDSCEFFHDPNKGRSDEGKVRKVLKVEPLPDGSGHFFNL 375
            RKQVFSLSVTEIG+++ LG+++S EFFHDP KG+SDEGKVRKVLKVEPLPDGSGHFFNL
Sbjct: 150 SRKQVFSLSVTEIGSLVCLGSKESIEFFHDPFKGKSDEGKVRKVLKVEPLPDGSGHFFNL 209

Query: 374 SVQNKLANLDESIYIPITKAEFAVLVSSFNFIIPYLLGWHTFANTMKPEDANRVNSANPR 195
           SVQNKL NLDES+YIPIT+AEFAVL S+FNFI+PY+LGWH +AN++KPED++R+N+++ R
Sbjct: 210 SVQNKLINLDESVYIPITRAEFAVLKSAFNFILPYILGWHAYANSIKPEDSSRMNNSSSR 269

Query: 194 SSVDFEWNR 168
              DFEW+R
Sbjct: 270 YGGDFEWSR 278