BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00029394
         (420 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004309472.1| PREDICTED: putative ribonuclease H protein A...    66   5e-09
ref|XP_004309110.1| PREDICTED: putative ribonuclease H protein A...    65   9e-09
gb|ABD28730.1| Ribonuclease H [Medicago truncatula]                    65   1e-08
ref|XP_006579213.1| PREDICTED: uncharacterized protein LOC102670...    63   4e-08
ref|XP_004296004.1| PREDICTED: putative ribonuclease H protein A...    59   5e-08
ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medica...    60   2e-07
ref|XP_006595311.1| PREDICTED: uncharacterized protein LOC102668...    60   4e-07
ref|XP_003605842.1| Glycerol-3-phosphate dehydrogenase [Medicago...    58   1e-06
ref|XP_004308214.1| PREDICTED: putative ribonuclease H protein A...    58   1e-06
ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula] g...    58   1e-06
ref|XP_002332211.1| predicted protein [Populus trichocarpa]            58   1e-06
ref|XP_006300939.1| hypothetical protein CARUB_v10021318mg, part...    57   3e-06
ref|NP_567266.1| RNA-directed DNA polymerase (reverse transcript...    56   6e-06
gb|ABK28243.1| unknown [Arabidopsis thaliana]                          56   6e-06
gb|ABE65512.1| hypothetical protein At4g04650 [Arabidopsis thali...    56   6e-06
ref|XP_002331075.1| predicted protein [Populus trichocarpa]            55   1e-05

>ref|XP_004309472.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 364

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 32/86 (37%), Positives = 48/86 (55%)
 Frame = -3

Query: 259 GNVTSKAAYAHVHPHSPVVQWGSWIWSPNIPERLSTVVWRAINNRLTVLDLLQPRGSFIG 80
           G +++K A+  + P  P + WG  IWS  I  R+S   W+ +  R+   DLLQ RG  + 
Sbjct: 13  GELSAKEAFQFLRPRLPSLDWGKLIWSKFIIPRISLHSWKVLRGRVLSEDLLQRRGIALA 72

Query: 79  PSVCALCCASAESIDHLFVSCVFAGA 2
            S C LC    ES+ H+F++C FA +
Sbjct: 73  -SRCVLCGRDGESLPHIFLTCSFAAS 97


>ref|XP_004309110.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 872

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 34/89 (38%), Positives = 48/89 (53%)
 Frame = -3

Query: 268 SDDGNVTSKAAYAHVHPHSPVVQWGSWIWSPNIPERLSTVVWRAINNRLTVLDLLQPRGS 89
           S  G +T+K A+  +   SPVV WG  +WS  I  R+S   W+ +   +    LLQ RG 
Sbjct: 504 SSTGELTAKQAFLFLQQASPVVPWGKPLWSKFILPRMSLHAWKVMRGTVISYHLLQRRGV 563

Query: 88  FIGPSVCALCCASAESIDHLFVSCVFAGA 2
            +  S C  C  S ES+DH+F+ C FA +
Sbjct: 564 AL-VSRCEFCGNSTESLDHIFLHCSFAAS 591


>gb|ABD28730.1| Ribonuclease H [Medicago truncatula]
          Length = 409

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 27/84 (32%), Positives = 46/84 (54%)
 Frame = -3

Query: 268 SDDGNVTSKAAYAHVHPHSPVVQWGSWIWSPNIPERLSTVVWRAINNRLTVLDLLQPRGS 89
           S DG++++K A++ +  H P V W   +W+   P   + + WR ++N+L   D L+ RG 
Sbjct: 48  SVDGDLSNKLAFSFLPGHGPTVHWAKMLWNAYTPPTGAFITWRFLHNKLPTDDNLRKRGC 107

Query: 88  FIGPSVCALCCASAESIDHLFVSC 17
           +I    C  C   AE+  H+F+ C
Sbjct: 108 YIVSICCCFCRKQAETSSHIFLQC 131


>ref|XP_006579213.1| PREDICTED: uncharacterized protein LOC102670237 [Glycine max]
          Length = 383

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 32/74 (43%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
 Frame = -3

Query: 235 YAHVHPHSPVVQWGSWIWSPNIPERLSTVVWRAINNRLTVLDLLQPRGSFIGPS-VCALC 59
           Y ++    PVV W S IW+P IP ++S ++W A  NRL  LD    R +F+    +C LC
Sbjct: 275 YDYIRGTRPVVHWSSIIWNPVIPSKMSFILWLATKNRLLALD----RAAFLNKGFLCPLC 330

Query: 58  CASAESIDHLFVSC 17
              AES  HLF SC
Sbjct: 331 TNEAESHAHLFFSC 344


>ref|XP_004296004.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 751

 Score = 58.5 bits (140), Expect(2) = 5e-08
 Identities = 36/89 (40%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
 Frame = -3

Query: 268 SDDGNVTSKAAYAHVHPHSPVVQWGSWIWSPNIPERLSTVVWRAINNRLTVLDLLQPRG- 92
           S  G  +    Y  V P+   + W S +W   IP R S + WR  + +L   D LQ RG 
Sbjct: 447 SSSGIFSFSDGYELVRPYFEKLDWASSVWHSFIPPRYSVLAWRIFHLKLPTDDQLQRRGI 506

Query: 91  SFIGPSVCALCCAS-AESIDHLFVSCVFA 8
            F+  SVC LC  S  E I HLFV+C FA
Sbjct: 507 PFV--SVCQLCSFSHTEDIPHLFVNCSFA 533



 Score = 23.9 bits (50), Expect(2) = 5e-08
 Identities = 10/39 (25%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
 Frame = -1

Query: 399 RISDYFYDESWHFTFAFVETYLHLVWDIVRVPI--TPSS 289
           R++D+ +D+ W     F   +      I+ +P+  TP S
Sbjct: 401 RVADFIWDQQWALPSHFSNLFPDCAKQILEIPLPNTPES 439


>ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medicago truncatula]
           gi|355496705|gb|AES77908.1| Cytochrome c biogenesis
           protein ccsA [Medicago truncatula]
          Length = 666

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 28/81 (34%), Positives = 45/81 (55%)
 Frame = -3

Query: 259 GNVTSKAAYAHVHPHSPVVQWGSWIWSPNIPERLSTVVWRAINNRLTVLDLLQPRGSFIG 80
           G++T++ AY  ++     V W  ++W+  IP   S + WR ++N+L   + L+ RG  I 
Sbjct: 16  GDLTNQLAYKFINETGNHVLWDKFLWNSYIPPSRSFITWRLLHNKLPTDENLRKRGCLI- 74

Query: 79  PSVCALCCASAESIDHLFVSC 17
            S+C  C  SAES  H+F  C
Sbjct: 75  VSICCFCMKSAESSQHIFFEC 95


>ref|XP_006595311.1| PREDICTED: uncharacterized protein LOC102668530 [Glycine max]
          Length = 477

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 29/75 (38%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
 Frame = -3

Query: 238 AYAHVHPHSPVVQWGSWIWSPNIPERLSTVVWRAINNRLTVLDLLQPRGSFIGPS-VCAL 62
           AY ++    P V W S +W+P IP ++S ++W A  N L  LD    R +F+    +C L
Sbjct: 303 AYDYIRGVKPAVNWNSVVWNPAIPSKMSFILWLATKNHLLTLD----RAAFLNKGLLCPL 358

Query: 61  CCASAESIDHLFVSC 17
           C   A+S  HLF SC
Sbjct: 359 CRTKAKSHAHLFFSC 373


>ref|XP_003605842.1| Glycerol-3-phosphate dehydrogenase [Medicago truncatula]
           gi|355506897|gb|AES88039.1| Glycerol-3-phosphate
           dehydrogenase [Medicago truncatula]
          Length = 866

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 27/60 (45%), Positives = 38/60 (63%)
 Frame = -3

Query: 187 IWSPNIPERLSTVVWRAINNRLTVLDLLQPRGSFIGPSVCALCCASAESIDHLFVSCVFA 8
           IWSPNIP   S + WR +N+++ V + L+ RG  I P +C+LC  + ES  HLF  C +A
Sbjct: 47  IWSPNIPPSKSLLAWRLMNDKIPVDEKLKERGHVI-PFICSLCMTAEESSFHLFFECSYA 105


>ref|XP_004308214.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 409

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
 Frame = -3

Query: 268 SDDGNVTSKAAYAHVHPHSPVVQWGSWIWSPNIPERLSTVVWRAINNRLTVLDLLQPRGS 89
           S  G + +K A+  + P  P + W   IWS  I  R+S   W+ +  R+   DLLQ RG 
Sbjct: 41  SSSGELLAKEAFQFMRPRLPSLDWSKLIWSKFIIPRISLHSWKVLRGRVLSEDLLQRRGI 100

Query: 88  FIGPSVCALCCASAE-SIDHLFVSCVFAGA 2
            +  S C LC    E S  H+F++C F  +
Sbjct: 101 VLA-SRCVLCGRDCESSFPHIFLTCSFVAS 129


>ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula]
           gi|355506707|gb|AES87849.1| GDSL esterase/lipase
           [Medicago truncatula]
          Length = 1004

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 29/87 (33%), Positives = 47/87 (54%)
 Frame = -3

Query: 268 SDDGNVTSKAAYAHVHPHSPVVQWGSWIWSPNIPERLSTVVWRAINNRLTVLDLLQPRGS 89
           + +G++  + +YA  +       W   IWS +IP   S + WR I++++   + LQ RG 
Sbjct: 89  NSNGDLMMRDSYAFKNQPVNTHNWAKLIWSKDIPPSKSILTWRLIHDKVPTDEKLQQRGC 148

Query: 88  FIGPSVCALCCASAESIDHLFVSCVFA 8
            + PS+C+LC    E+  HLF  C FA
Sbjct: 149 QL-PSMCSLCGTHVETSFHLFFECCFA 174


>ref|XP_002332211.1| predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 28/81 (34%), Positives = 42/81 (51%)
 Frame = -3

Query: 244  KAAYAHVHPHSPVVQWGSWIWSPNIPERLSTVVWRAINNRLTVLDLLQPRGSFIGPSVCA 65
            K A+ H+  H  +V+W   +W  N   R S ++W A+  +LT  D L  R    GP+ C+
Sbjct: 1200 KVAWEHLRRHRQMVEWHDIVWFKNAVPRHSFLLWMAVQQKLTTQDKLY-RFGIHGPNRCS 1258

Query: 64   LCCASAESIDHLFVSCVFAGA 2
            LC  + E  +HLF  C +  A
Sbjct: 1259 LCLRNNEDHNHLFFECSYTKA 1279


>ref|XP_006300939.1| hypothetical protein CARUB_v10021318mg, partial [Capsella rubella]
           gi|482569649|gb|EOA33837.1| hypothetical protein
           CARUB_v10021318mg, partial [Capsella rubella]
          Length = 290

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 31/96 (32%), Positives = 45/96 (46%)
 Frame = -3

Query: 295 FFTGQAGMRSDDGNVTSKAAYAHVHPHSPVVQWGSWIWSPNIPERLSTVVWRAINNRLTV 116
           FF  +       G  ++   +   HP  P+V W   +W      + + + W  I NRLT 
Sbjct: 81  FFLWRNSPNEPPGVFSTSKTWISTHPAGPLVPWFKSVWFKERIPKHAFISWVVIRNRLTT 140

Query: 115 LDLLQPRGSFIGPSVCALCCASAESIDHLFVSCVFA 8
            D L+  G  + PS C LC +SAES  HLF  C ++
Sbjct: 141 RDRLRGWGMNV-PSECLLCTSSAESRLHLFFECAYS 175


>ref|NP_567266.1| RNA-directed DNA polymerase (reverse transcriptase)-related family
           protein [Arabidopsis thaliana]
           gi|5732057|gb|AAD48956.1|AF149414_5 contains similarity
           to a family of Arabidopsis thaliana predicted proteins,
           which have similarity to reverse transcriptases; see
           T14P8.10 (GB:AF069298) [Arabidopsis thaliana]
           gi|7267223|emb|CAB80830.1| AT4g04650 [Arabidopsis
           thaliana] gi|332657009|gb|AEE82409.1| RNA-directed DNA
           polymerase (reverse transcriptase)-related family
           protein [Arabidopsis thaliana]
          Length = 332

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 32/113 (28%), Positives = 49/113 (43%)
 Frame = -3

Query: 343 DLFASGLGYCSCPYHAFFTGQAGMRSDDGNVTSKAAYAHVHPHSPVVQWGSWIWSPNIPE 164
           +L     G   C +   F  +  + +     ++   ++ +HP S  V W   +W  N   
Sbjct: 81  NLLPEAQGLLDCQHDDSFLWKTDLHAPSNRFSAPRTWSALHPQSHTVPWHKAVWFKNHVP 140

Query: 163 RLSTVVWRAINNRLTVLDLLQPRGSFIGPSVCALCCASAESIDHLFVSCVFAG 5
           + + + W    NRL   D LQ  G  I P+ C LC A  +S  HLF  C F+G
Sbjct: 141 KHAFICWVVAWNRLHTRDRLQNWGLSI-PAECLLCNAHDDSRAHLFFECQFSG 192


>gb|ABK28243.1| unknown [Arabidopsis thaliana]
          Length = 297

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 32/113 (28%), Positives = 49/113 (43%)
 Frame = -3

Query: 343 DLFASGLGYCSCPYHAFFTGQAGMRSDDGNVTSKAAYAHVHPHSPVVQWGSWIWSPNIPE 164
           +L     G   C +   F  +  + +     ++   ++ +HP S  V W   +W  N   
Sbjct: 81  NLLPEAQGLLDCQHDDSFLWKTDLHAPSNRFSAPRTWSALHPQSHTVPWHKAVWFKNHVP 140

Query: 163 RLSTVVWRAINNRLTVLDLLQPRGSFIGPSVCALCCASAESIDHLFVSCVFAG 5
           + + + W    NRL   D LQ  G  I P+ C LC A  +S  HLF  C F+G
Sbjct: 141 KHAFICWVVAWNRLHTRDRLQNWGLSI-PAECLLCNAHDDSRAHLFFECQFSG 192


>gb|ABE65512.1| hypothetical protein At4g04650 [Arabidopsis thaliana]
          Length = 296

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 32/113 (28%), Positives = 49/113 (43%)
 Frame = -3

Query: 343 DLFASGLGYCSCPYHAFFTGQAGMRSDDGNVTSKAAYAHVHPHSPVVQWGSWIWSPNIPE 164
           +L     G   C +   F  +  + +     ++   ++ +HP S  V W   +W  N   
Sbjct: 81  NLLPEAQGLLDCQHDDSFLWKTDLHAPSNRFSAPRTWSALHPQSHTVPWHKAVWFKNHVP 140

Query: 163 RLSTVVWRAINNRLTVLDLLQPRGSFIGPSVCALCCASAESIDHLFVSCVFAG 5
           + + + W    NRL   D LQ  G  I P+ C LC A  +S  HLF  C F+G
Sbjct: 141 KHAFICWVVAWNRLHTRDRLQNWGLSI-PAECLLCNAHDDSRAHLFFECQFSG 192


>ref|XP_002331075.1| predicted protein [Populus trichocarpa]
          Length = 517

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 27/81 (33%), Positives = 41/81 (50%)
 Frame = -3

Query: 244 KAAYAHVHPHSPVVQWGSWIWSPNIPERLSTVVWRAINNRLTVLDLLQPRGSFIGPSVCA 65
           K A+  +  H  +V+W   +W  N   R S ++W A+  +LT  D L  R    GP+ C+
Sbjct: 327 KVAWEQLRRHRQMVEWHDIVWFKNAVPRHSFLLWMAVQQKLTTQDKLH-RFGIHGPNRCS 385

Query: 64  LCCASAESIDHLFVSCVFAGA 2
           LC  + E  +HLF  C +  A
Sbjct: 386 LCLRNNEDHNHLFFECSYTKA 406