BLASTX nr result
ID: Rehmannia22_contig00029337
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00029337
(655 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002282614.1| PREDICTED: RNA pseudourine synthase 4, mitoc... 342 6e-92
gb|EXB63685.1| RNA pseudourine synthase 4 [Morus notabilis] 326 4e-87
ref|XP_006346360.1| PREDICTED: RNA pseudouridine synthase 4, mit... 324 2e-86
gb|EMJ01009.1| hypothetical protein PRUPE_ppa004969mg [Prunus pe... 323 3e-86
ref|XP_004230733.1| PREDICTED: RNA pseudourine synthase 4, mitoc... 323 4e-86
ref|XP_002313876.2| hypothetical protein POPTR_0009s09860g [Popu... 318 1e-84
ref|XP_002518674.1| ribosomal pseudouridine synthase, putative [... 317 2e-84
gb|EMJ01008.1| hypothetical protein PRUPE_ppa004969mg [Prunus pe... 316 3e-84
ref|XP_006422925.1| hypothetical protein CICLE_v10028283mg [Citr... 311 1e-82
gb|EOX98365.1| Ribosomal pseudouridine synthase, putative [Theob... 311 1e-82
ref|XP_006486999.1| PREDICTED: RNA pseudouridine synthase 4, mit... 310 2e-82
ref|XP_004511295.1| PREDICTED: RNA pseudourine synthase 4, mitoc... 307 2e-81
ref|XP_004305959.1| PREDICTED: RNA pseudourine synthase 4, mitoc... 306 3e-81
gb|ESW29223.1| hypothetical protein PHAVU_002G053600g [Phaseolus... 305 6e-81
ref|XP_006573909.1| PREDICTED: RNA pseudouridine synthase 4, mit... 305 8e-81
ref|XP_003516775.1| PREDICTED: RNA pseudouridine synthase 4, mit... 305 8e-81
ref|XP_003635999.1| RNA pseudourine synthase [Medicago truncatul... 301 1e-79
ref|XP_006847251.1| hypothetical protein AMTR_s00015p00025410 [A... 297 2e-78
ref|XP_004170490.1| PREDICTED: RNA pseudourine synthase 4, mitoc... 295 1e-77
ref|XP_004137095.1| PREDICTED: RNA pseudourine synthase 4, mitoc... 295 1e-77
>ref|XP_002282614.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial [Vitis
vinifera] gi|296090438|emb|CBI40257.3| unnamed protein
product [Vitis vinifera]
Length = 476
Score = 342 bits (877), Expect = 6e-92
Identities = 169/214 (78%), Positives = 187/214 (87%), Gaps = 1/214 (0%)
Frame = +2
Query: 17 NEEEMKFIHSLELYKDAAMIVINKPPGMPVQGGLGIKSSLDELAAKYLRYDYSESPRLVH 196
N+EE+ F+H+LELYKD A+IV+NKPPG+PVQGG+GIK SLDELAA YLRYD SE PRLVH
Sbjct: 175 NDEEINFVHNLELYKDPAIIVVNKPPGLPVQGGIGIKRSLDELAATYLRYDCSEPPRLVH 234
Query: 197 RLDRDSSGILVMGRTQLSTTILHSIFREKTFGASN-DVPGSDRILQKKYYALVIGSPRRR 373
RLDRDSSGIL+MGRTQ S TILHSIFREKTFGASN D+ RILQ++Y+ALVIGSPRR
Sbjct: 235 RLDRDSSGILIMGRTQTSATILHSIFREKTFGASNNDIDTKKRILQRRYWALVIGSPRRP 294
Query: 374 EGLISVPLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSPLTGR 553
GLIS PL KVVVD+GKSERIT+VDN T+S QH+ TEYRVI SS GYTWLELSPLTGR
Sbjct: 295 RGLISAPLGKVVVDDGKSERITIVDNVQTMSSQHAITEYRVIKSSCHGYTWLELSPLTGR 354
Query: 554 KHQLRVHCAEVLGTPIVGDYKYGWQAHKKLGQYF 655
KHQLRVHCAEVLGTPIVGDYKYGWQAH+K Q F
Sbjct: 355 KHQLRVHCAEVLGTPIVGDYKYGWQAHRKWKQLF 388
>gb|EXB63685.1| RNA pseudourine synthase 4 [Morus notabilis]
Length = 470
Score = 326 bits (835), Expect = 4e-87
Identities = 158/212 (74%), Positives = 182/212 (85%), Gaps = 1/212 (0%)
Frame = +2
Query: 5 QSFSNEEEMKFIHSLELYKDAAMIVINKPPGMPVQGGLGIKSSLDELAAKYLRYDYSESP 184
+ F NEEE+KFI SLELYKD A++V+NKPPG+PVQGG+GIK+SLD+LA L YDY+E P
Sbjct: 165 ECFCNEEEVKFIRSLELYKDPAIVVVNKPPGLPVQGGIGIKTSLDQLAVTCLSYDYTEPP 224
Query: 185 RLVHRLDRDSSGILVMGRTQLSTTILHSIFREKTFGASNDVPGSDRI-LQKKYYALVIGS 361
RLVHRLDRD SGILVMGRTQ S T+LHSIFREKTFGASND +I LQ++Y+A VIGS
Sbjct: 225 RLVHRLDRDCSGILVMGRTQTSATVLHSIFREKTFGASNDETVKGKIVLQRRYWAFVIGS 284
Query: 362 PRRREGLISVPLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSP 541
PR GLIS PL KVV+DNGKS+RITVV+ +HTLS QH+ T+Y+VI SS GYTWLELSP
Sbjct: 285 PRHPNGLISAPLRKVVLDNGKSDRITVVNGSHTLSSQHAITKYKVIGSSSHGYTWLELSP 344
Query: 542 LTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHK 637
LTGRKHQLRVHCAEVLGTP+VGDYKYGWQAH+
Sbjct: 345 LTGRKHQLRVHCAEVLGTPMVGDYKYGWQAHR 376
>ref|XP_006346360.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like
[Solanum tuberosum]
Length = 467
Score = 324 bits (830), Expect = 2e-86
Identities = 156/211 (73%), Positives = 181/211 (85%), Gaps = 1/211 (0%)
Frame = +2
Query: 14 SNEEEMKFIHSLELYKDAAMIVINKPPGMPVQGGLGIKSSLDELAAKYLRYDYSESPRLV 193
S+EEE KF+HSLELYKD ++V+NKPPGMPVQGG+GIK SLDELAAKY+R++YSE+PRLV
Sbjct: 165 SSEEERKFVHSLELYKDPEIVVVNKPPGMPVQGGIGIKRSLDELAAKYMRHEYSEAPRLV 224
Query: 194 HRLDRDSSGILVMGRTQLSTTILHSIFREKTFGASN-DVPGSDRILQKKYYALVIGSPRR 370
HRLDRD SG+LVMGRTQLS + LHSIFREKTF + N D+ RILQKKY+ALVIG PRR
Sbjct: 225 HRLDRDCSGLLVMGRTQLSASALHSIFREKTFDSQNEDLESKKRILQKKYWALVIGCPRR 284
Query: 371 REGLISVPLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSPLTG 550
G+IS PL K+V+DNGKSERIT++ + S Q++ TEYR+I SS GYTWLELSPLTG
Sbjct: 285 SGGIISAPLGKLVLDNGKSERITIMSDVRAPSAQYAVTEYRIIGSSEKGYTWLELSPLTG 344
Query: 551 RKHQLRVHCAEVLGTPIVGDYKYGWQAHKKL 643
RKHQLRVHCAE LGTPIVGDYKYGWQAH+KL
Sbjct: 345 RKHQLRVHCAEALGTPIVGDYKYGWQAHRKL 375
>gb|EMJ01009.1| hypothetical protein PRUPE_ppa004969mg [Prunus persica]
Length = 483
Score = 323 bits (828), Expect = 3e-86
Identities = 159/212 (75%), Positives = 184/212 (86%), Gaps = 1/212 (0%)
Frame = +2
Query: 5 QSFSNEEEMKFIHSLELYKDAAMIVINKPPGMPVQGGLGIKSSLDELAAKYLRYDYSESP 184
+ + +EEE+ FI SLELYKD A+IVINKPPGMPVQGG+GIK SLDELAA L YD+SE P
Sbjct: 178 ECYCSEEEVTFIRSLELYKDPAIIVINKPPGMPVQGGIGIKRSLDELAAACLSYDFSEPP 237
Query: 185 RLVHRLDRDSSGILVMGRTQLSTTILHSIFREKTFGASND-VPGSDRILQKKYYALVIGS 361
RLVHRLDRDSSGILVMGRTQ S T+LHSIFREKTFGASND + + RILQ++Y+ALVIGS
Sbjct: 238 RLVHRLDRDSSGILVMGRTQTSATVLHSIFREKTFGASNDEIDDAKRILQRRYWALVIGS 297
Query: 362 PRRREGLISVPLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSP 541
PR+R+GLIS PL KVVVDNGKS+RIT+V+++ TL QH+ T+Y+VI S GYTWLEL+P
Sbjct: 298 PRQRKGLISAPLGKVVVDNGKSDRITIVNDSQTLPSQHAITKYKVIGSPCPGYTWLELTP 357
Query: 542 LTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHK 637
LTGRKHQLRVHCAEVL TPIVGDYKYGWQ H+
Sbjct: 358 LTGRKHQLRVHCAEVLRTPIVGDYKYGWQTHR 389
>ref|XP_004230733.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Solanum
lycopersicum]
Length = 467
Score = 323 bits (827), Expect = 4e-86
Identities = 157/211 (74%), Positives = 180/211 (85%), Gaps = 1/211 (0%)
Frame = +2
Query: 14 SNEEEMKFIHSLELYKDAAMIVINKPPGMPVQGGLGIKSSLDELAAKYLRYDYSESPRLV 193
S+EEE KF+HSLELYKDA +IV+NKPPGMPVQGG+GIK SLDELAAKY+ + YSE+PRLV
Sbjct: 165 SSEEERKFVHSLELYKDAEIIVVNKPPGMPVQGGIGIKRSLDELAAKYMSHQYSEAPRLV 224
Query: 194 HRLDRDSSGILVMGRTQLSTTILHSIFREKTFGASN-DVPGSDRILQKKYYALVIGSPRR 370
HRLDRD SG+LVMGRTQLS + LHSIFREKTF + N D+ RILQKKY+ALVIG PRR
Sbjct: 225 HRLDRDCSGLLVMGRTQLSASALHSIFREKTFDSQNEDLESKKRILQKKYWALVIGCPRR 284
Query: 371 REGLISVPLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSPLTG 550
G+IS PL K+V+DNGKSERIT++ + S Q++ TEYR+I SS GYTWLELSPLTG
Sbjct: 285 SGGIISAPLGKLVLDNGKSERITIMSDVREPSAQYAVTEYRIIGSSEKGYTWLELSPLTG 344
Query: 551 RKHQLRVHCAEVLGTPIVGDYKYGWQAHKKL 643
RKHQLRVHCAE LGTPIVGDYKYGWQAH+KL
Sbjct: 345 RKHQLRVHCAEALGTPIVGDYKYGWQAHRKL 375
>ref|XP_002313876.2| hypothetical protein POPTR_0009s09860g [Populus trichocarpa]
gi|550331407|gb|EEE87831.2| hypothetical protein
POPTR_0009s09860g [Populus trichocarpa]
Length = 471
Score = 318 bits (814), Expect = 1e-84
Identities = 161/212 (75%), Positives = 179/212 (84%), Gaps = 1/212 (0%)
Frame = +2
Query: 17 NEEEMKFIHSLELYKDAAMIVINKPPGMPVQGGLGIKSSLDELAAKYLRYDYSESPRLVH 196
NEEE+ FI LELYKDAA+IV+NKPPGMPVQGG+GIK SLDEL+A DYSE PRLVH
Sbjct: 171 NEEEINFIRGLELYKDAAIIVVNKPPGMPVQGGIGIKRSLDELSASCFSSDYSEPPRLVH 230
Query: 197 RLDRDSSGILVMGRTQLSTTILHSIFREKTFGASNDVPGSD-RILQKKYYALVIGSPRRR 373
RLDRD SGILVMGRTQ S T+LH+IFREKT ASND G+ RILQ+KY+ALVIGSPRR
Sbjct: 231 RLDRDCSGILVMGRTQTSATVLHAIFREKTLAASNDDVGNKRRILQRKYWALVIGSPRRP 290
Query: 374 EGLISVPLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSPLTGR 553
+GLIS PL KVVVDNGKS+RITVV+N+ LS QH+ T+YRVI SS G+TWLELSPLTGR
Sbjct: 291 KGLISAPLGKVVVDNGKSDRITVVENSQNLSSQHAVTQYRVIESS-HGFTWLELSPLTGR 349
Query: 554 KHQLRVHCAEVLGTPIVGDYKYGWQAHKKLGQ 649
KHQLRVHCAEVLGTPIVGDYKY WQAH+ Q
Sbjct: 350 KHQLRVHCAEVLGTPIVGDYKYAWQAHRNWKQ 381
>ref|XP_002518674.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
gi|223542055|gb|EEF43599.1| ribosomal pseudouridine
synthase, putative [Ricinus communis]
Length = 536
Score = 317 bits (812), Expect = 2e-84
Identities = 158/211 (74%), Positives = 179/211 (84%), Gaps = 1/211 (0%)
Frame = +2
Query: 20 EEEMKFIHSLELYKDAAMIVINKPPGMPVQGGLGIKSSLDELAAKYLRYDYSESPRLVHR 199
E+E FI LELYKD A+IV+NKPPGMPVQGG+GIKSS DELAA L YDYSE PRLVHR
Sbjct: 237 EKEANFIRGLELYKDEAIIVVNKPPGMPVQGGIGIKSSFDELAASCLSYDYSEPPRLVHR 296
Query: 200 LDRDSSGILVMGRTQLSTTILHSIFREKTFGASN-DVPGSDRILQKKYYALVIGSPRRRE 376
LDRDSSGILVMGRTQ ST +LHS+FREKTF ASN D+ RILQ+KY+ALVIGSPRR++
Sbjct: 297 LDRDSSGILVMGRTQTSTMVLHSVFREKTFAASNHDIGERRRILQRKYWALVIGSPRRQK 356
Query: 377 GLISVPLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSPLTGRK 556
G+IS PL KVVVD+GKS+RITVV+N + S QH+ T+YRV+ SS GY WLELSP+TGRK
Sbjct: 357 GIISAPLGKVVVDDGKSDRITVVENAESTSFQHAVTQYRVMESS-HGYAWLELSPITGRK 415
Query: 557 HQLRVHCAEVLGTPIVGDYKYGWQAHKKLGQ 649
HQLRVHCAEVLGTPIVGDYKYGWQ H+K Q
Sbjct: 416 HQLRVHCAEVLGTPIVGDYKYGWQVHRKWKQ 446
>gb|EMJ01008.1| hypothetical protein PRUPE_ppa004969mg [Prunus persica]
Length = 481
Score = 316 bits (810), Expect = 3e-84
Identities = 158/212 (74%), Positives = 183/212 (86%), Gaps = 1/212 (0%)
Frame = +2
Query: 5 QSFSNEEEMKFIHSLELYKDAAMIVINKPPGMPVQGGLGIKSSLDELAAKYLRYDYSESP 184
+ + +EEE+ FI SLELYKD A+IVINKPPGMPVQGG+GIK SLDELAA L YD+SE P
Sbjct: 178 ECYCSEEEVTFIRSLELYKDPAIIVINKPPGMPVQGGIGIKRSLDELAAACLSYDFSEPP 237
Query: 185 RLVHRLDRDSSGILVMGRTQLSTTILHSIFREKTFGASND-VPGSDRILQKKYYALVIGS 361
RLVHRLDRDSSGILVMGRTQ S T+LHSIFREKTFGASND + + RILQ++Y+ALVIGS
Sbjct: 238 RLVHRLDRDSSGILVMGRTQTSATVLHSIFREKTFGASNDEIDDAKRILQRRYWALVIGS 297
Query: 362 PRRREGLISVPLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSP 541
PR+R+GLIS PL KVVVDNGKS+RIT+V+++ TL QH+ T+Y+VI S YTWLEL+P
Sbjct: 298 PRQRKGLISAPLGKVVVDNGKSDRITIVNDSQTLPSQHAITKYKVIGS--PCYTWLELTP 355
Query: 542 LTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHK 637
LTGRKHQLRVHCAEVL TPIVGDYKYGWQ H+
Sbjct: 356 LTGRKHQLRVHCAEVLRTPIVGDYKYGWQTHR 387
>ref|XP_006422925.1| hypothetical protein CICLE_v10028283mg [Citrus clementina]
gi|557524859|gb|ESR36165.1| hypothetical protein
CICLE_v10028283mg [Citrus clementina]
Length = 494
Score = 311 bits (797), Expect = 1e-82
Identities = 155/212 (73%), Positives = 177/212 (83%), Gaps = 1/212 (0%)
Frame = +2
Query: 20 EEEMKFIHSLELYKDAAMIVINKPPGMPVQGGLGIKSSLDELAAKYLRYDYSESPRLVHR 199
EEE+ FI SLELYKD+A+IVINKP GMPVQGG+GI+ S+DELAA L YDYSE PRLVHR
Sbjct: 194 EEEVGFIQSLELYKDSAIIVINKPHGMPVQGGIGIRRSIDELAATCLTYDYSEPPRLVHR 253
Query: 200 LDRDSSGILVMGRTQLSTTILHSIFREKTFGASN-DVPGSDRILQKKYYALVIGSPRRRE 376
LDRDSSGILVMGRTQ S T+LHSIFREKTF AS D RILQ+ Y+ALV+G+PR +
Sbjct: 254 LDRDSSGILVMGRTQTSATVLHSIFREKTFSASKEDNDNEKRILQRWYWALVVGTPRCSK 313
Query: 377 GLISVPLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSPLTGRK 556
G+IS PL KVVVDNGKS+RITVV+N+ +S QH+ T Y+VI S GYTWL+LSPLTGRK
Sbjct: 314 GVISAPLRKVVVDNGKSDRITVVNNDQIMSAQHAVTRYQVIKPSCHGYTWLKLSPLTGRK 373
Query: 557 HQLRVHCAEVLGTPIVGDYKYGWQAHKKLGQY 652
HQLRVHCAEVLGTPIVGDYKYGWQ H+K Q+
Sbjct: 374 HQLRVHCAEVLGTPIVGDYKYGWQTHRKWKQF 405
>gb|EOX98365.1| Ribosomal pseudouridine synthase, putative [Theobroma cacao]
Length = 477
Score = 311 bits (797), Expect = 1e-82
Identities = 155/213 (72%), Positives = 180/213 (84%), Gaps = 1/213 (0%)
Frame = +2
Query: 5 QSFSNEEEMKFIHSLELYKDAAMIVINKPPGMPVQGGLGIKSSLDELAAKYLRYDYSESP 184
+S EEE+ FI LELYKD A+IV+NKPPGMPVQGG+GIK SLD+LAA L +DYSE P
Sbjct: 172 ESGCTEEELNFIRGLELYKDPAIIVLNKPPGMPVQGGIGIKWSLDKLAAACLCFDYSEPP 231
Query: 185 RLVHRLDRDSSGILVMGRTQLSTTILHSIFREKTFGAS-NDVPGSDRILQKKYYALVIGS 361
RLVHRLDRDSSGILVMGRTQ+S TILHS+FRE+T AS +DV RILQK+Y+ALVIGS
Sbjct: 232 RLVHRLDRDSSGILVMGRTQMSATILHSVFREETNDASKDDVDNEKRILQKRYWALVIGS 291
Query: 362 PRRREGLISVPLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSP 541
PRR +G+I PL KVVVD+GKS+RITV DN+ +S Q + TEY+VI ++ GYTWLELSP
Sbjct: 292 PRRPKGMIVAPLRKVVVDDGKSDRITVFDNSQIVSSQRAKTEYQVIKTTSHGYTWLELSP 351
Query: 542 LTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHKK 640
LTGRKHQLRVHCAEVLGTPIVGDYKYGWQAH++
Sbjct: 352 LTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHRR 384
>ref|XP_006486999.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like isoform
X1 [Citrus sinensis] gi|568867349|ref|XP_006487000.1|
PREDICTED: RNA pseudouridine synthase 4,
mitochondrial-like isoform X2 [Citrus sinensis]
Length = 362
Score = 310 bits (795), Expect = 2e-82
Identities = 154/212 (72%), Positives = 178/212 (83%), Gaps = 1/212 (0%)
Frame = +2
Query: 20 EEEMKFIHSLELYKDAAMIVINKPPGMPVQGGLGIKSSLDELAAKYLRYDYSESPRLVHR 199
EEE++FI SLELYKD+A+IVINKP GMPVQGG+GI+ S+DELAA L YDYSE PRLVHR
Sbjct: 62 EEEVEFIQSLELYKDSAIIVINKPHGMPVQGGIGIRRSIDELAATCLTYDYSEPPRLVHR 121
Query: 200 LDRDSSGILVMGRTQLSTTILHSIFREKTFGASN-DVPGSDRILQKKYYALVIGSPRRRE 376
LDRDSSGILVMGRTQ S T+LHSIFREKTF AS D +ILQ+ Y+ALV+G+PR +
Sbjct: 122 LDRDSSGILVMGRTQTSATVLHSIFREKTFSASKEDNDNEKKILQRWYWALVVGTPRCSK 181
Query: 377 GLISVPLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSPLTGRK 556
G+IS PL KVVVDNGKS+RITVV+N+ +S QH+ T Y+VI S GYTWL+LSPLTGRK
Sbjct: 182 GVISAPLGKVVVDNGKSDRITVVNNDQIMSAQHAVTRYQVIKPSCHGYTWLKLSPLTGRK 241
Query: 557 HQLRVHCAEVLGTPIVGDYKYGWQAHKKLGQY 652
HQLRVHCAEVLGTPIVGDYKYGWQ H+K Q+
Sbjct: 242 HQLRVHCAEVLGTPIVGDYKYGWQTHRKWKQF 273
>ref|XP_004511295.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Cicer
arietinum]
Length = 458
Score = 307 bits (786), Expect = 2e-81
Identities = 150/210 (71%), Positives = 174/210 (82%)
Frame = +2
Query: 23 EEMKFIHSLELYKDAAMIVINKPPGMPVQGGLGIKSSLDELAAKYLRYDYSESPRLVHRL 202
+++KF+ SL +YKD A +V+NKPPGMPVQGG+ IK SLD LAA L YDYS+ PRLVHRL
Sbjct: 159 KQIKFMRSLVIYKDPATVVLNKPPGMPVQGGINIKWSLDALAASSLNYDYSQPPRLVHRL 218
Query: 203 DRDSSGILVMGRTQLSTTILHSIFREKTFGASNDVPGSDRILQKKYYALVIGSPRRREGL 382
DRD SGILVMGRTQ ST +LHSIFR+KT AS+ RILQ++Y+ALVIG PRR GL
Sbjct: 219 DRDCSGILVMGRTQTSTVVLHSIFRDKTSRASDHNDTEKRILQRRYWALVIGRPRRSGGL 278
Query: 383 ISVPLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSPLTGRKHQ 562
I+ PL KVVVDNGKS+RIT+V+N+ +S QH+ TEYRV+ SS GYTWLELSPLTGRKHQ
Sbjct: 279 ITSPLGKVVVDNGKSDRITIVNNSTLVSSQHAVTEYRVLGSSSDGYTWLELSPLTGRKHQ 338
Query: 563 LRVHCAEVLGTPIVGDYKYGWQAHKKLGQY 652
LRVHCAEVLGTPIVGDYKYGWQAHKK G +
Sbjct: 339 LRVHCAEVLGTPIVGDYKYGWQAHKKWGHF 368
>ref|XP_004305959.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Fragaria
vesca subsp. vesca]
Length = 476
Score = 306 bits (784), Expect = 3e-81
Identities = 153/208 (73%), Positives = 176/208 (84%), Gaps = 1/208 (0%)
Frame = +2
Query: 17 NEEEMKFIHSLELYKDAAMIVINKPPGMPVQGGLGIKSSLDELAAKYLRYDYSESPRLVH 196
+EEE +FI SL LYKD A+IVINKPPG+PVQGG+GIK SLDELAA L YD S+ PRLVH
Sbjct: 165 SEEEAEFIRSLVLYKDPAIIVINKPPGLPVQGGIGIKRSLDELAATCLSYDLSQPPRLVH 224
Query: 197 RLDRDSSGILVMGRTQLSTTILHSIFREKTFGASNDV-PGSDRILQKKYYALVIGSPRRR 373
RLDRD SGILVMGRTQ S T+LHS+FREKTFGAS+DV + ILQ++Y ALVIGSPR++
Sbjct: 225 RLDRDCSGILVMGRTQTSATVLHSVFREKTFGASDDVIKHAKSILQRRYLALVIGSPRQQ 284
Query: 374 EGLISVPLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSPLTGR 553
EGLISVPL KVVVDNGKS+RIT+++ L QH+ T+Y+VI SS G+TWLEL PLTGR
Sbjct: 285 EGLISVPLGKVVVDNGKSDRITILNKAQCLPSQHAITKYKVIGSSCPGFTWLELIPLTGR 344
Query: 554 KHQLRVHCAEVLGTPIVGDYKYGWQAHK 637
KHQLRVHCAEVLGTPIVGDYKYGW+ HK
Sbjct: 345 KHQLRVHCAEVLGTPIVGDYKYGWRTHK 372
>gb|ESW29223.1| hypothetical protein PHAVU_002G053600g [Phaseolus vulgaris]
Length = 432
Score = 305 bits (782), Expect = 6e-81
Identities = 148/210 (70%), Positives = 176/210 (83%)
Frame = +2
Query: 23 EEMKFIHSLELYKDAAMIVINKPPGMPVQGGLGIKSSLDELAAKYLRYDYSESPRLVHRL 202
+++ FI +L ++KD A++V+NKPPGMPVQGG+ IK SLD +AA L Y+YSE PRLVHRL
Sbjct: 135 QQINFIRTLVIHKDPAILVLNKPPGMPVQGGINIKHSLDVVAAACLNYEYSEPPRLVHRL 194
Query: 203 DRDSSGILVMGRTQLSTTILHSIFREKTFGASNDVPGSDRILQKKYYALVIGSPRRREGL 382
DRD SGILVMGRTQ STT+LHSIFREKT A +D RILQ++Y+ALV+G PR +GL
Sbjct: 195 DRDCSGILVMGRTQTSTTVLHSIFREKTSRALDDTEEEKRILQRRYWALVLGRPRCSKGL 254
Query: 383 ISVPLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSPLTGRKHQ 562
++ L KVVVDNGKS+RITVVDN+ +LS QH+ TEYRVI+SS GYTWLELSPLTGRKHQ
Sbjct: 255 VTASLGKVVVDNGKSDRITVVDNSTSLSSQHAITEYRVIASSSQGYTWLELSPLTGRKHQ 314
Query: 563 LRVHCAEVLGTPIVGDYKYGWQAHKKLGQY 652
LRVHCAEVLGTPIVGDYKYGWQAH+K G +
Sbjct: 315 LRVHCAEVLGTPIVGDYKYGWQAHRKWGNF 344
>ref|XP_006573909.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like isoform
X2 [Glycine max]
Length = 429
Score = 305 bits (781), Expect = 8e-81
Identities = 145/210 (69%), Positives = 176/210 (83%)
Frame = +2
Query: 23 EEMKFIHSLELYKDAAMIVINKPPGMPVQGGLGIKSSLDELAAKYLRYDYSESPRLVHRL 202
+++ FI +L +YKD A++V+NKPPGMPVQGG+ IK SLD +AA L Y YS+ PRLVHRL
Sbjct: 132 QQINFIRTLVIYKDPAILVLNKPPGMPVQGGINIKRSLDAVAAASLNYGYSQPPRLVHRL 191
Query: 203 DRDSSGILVMGRTQLSTTILHSIFREKTFGASNDVPGSDRILQKKYYALVIGSPRRREGL 382
DRD SGILVMGRT STT+LHSIFREKT AS+D+ RILQ++Y+ALV+G PRR +GL
Sbjct: 192 DRDCSGILVMGRTHTSTTVLHSIFREKTSRASDDIGKEKRILQRRYWALVLGCPRRPKGL 251
Query: 383 ISVPLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSPLTGRKHQ 562
++ L KVVVDNG+S+RIT+VDN+ +S QH+ TEYRVI+SS GYTWLEL+PLTGRKHQ
Sbjct: 252 VTASLGKVVVDNGRSDRITIVDNSTLMSSQHAITEYRVIASSSQGYTWLELTPLTGRKHQ 311
Query: 563 LRVHCAEVLGTPIVGDYKYGWQAHKKLGQY 652
LRVHCAEVLGTPIVGDYKYGWQAH+K G +
Sbjct: 312 LRVHCAEVLGTPIVGDYKYGWQAHRKWGHF 341
>ref|XP_003516775.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like isoform
X1 [Glycine max]
Length = 427
Score = 305 bits (781), Expect = 8e-81
Identities = 145/210 (69%), Positives = 176/210 (83%)
Frame = +2
Query: 23 EEMKFIHSLELYKDAAMIVINKPPGMPVQGGLGIKSSLDELAAKYLRYDYSESPRLVHRL 202
+++ FI +L +YKD A++V+NKPPGMPVQGG+ IK SLD +AA L Y YS+ PRLVHRL
Sbjct: 130 QQINFIRTLVIYKDPAILVLNKPPGMPVQGGINIKRSLDAVAAASLNYGYSQPPRLVHRL 189
Query: 203 DRDSSGILVMGRTQLSTTILHSIFREKTFGASNDVPGSDRILQKKYYALVIGSPRRREGL 382
DRD SGILVMGRT STT+LHSIFREKT AS+D+ RILQ++Y+ALV+G PRR +GL
Sbjct: 190 DRDCSGILVMGRTHTSTTVLHSIFREKTSRASDDIGKEKRILQRRYWALVLGCPRRPKGL 249
Query: 383 ISVPLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSPLTGRKHQ 562
++ L KVVVDNG+S+RIT+VDN+ +S QH+ TEYRVI+SS GYTWLEL+PLTGRKHQ
Sbjct: 250 VTASLGKVVVDNGRSDRITIVDNSTLMSSQHAITEYRVIASSSQGYTWLELTPLTGRKHQ 309
Query: 563 LRVHCAEVLGTPIVGDYKYGWQAHKKLGQY 652
LRVHCAEVLGTPIVGDYKYGWQAH+K G +
Sbjct: 310 LRVHCAEVLGTPIVGDYKYGWQAHRKWGHF 339
>ref|XP_003635999.1| RNA pseudourine synthase [Medicago truncatula]
gi|355501934|gb|AES83137.1| RNA pseudourine synthase
[Medicago truncatula]
Length = 430
Score = 301 bits (770), Expect = 1e-79
Identities = 148/211 (70%), Positives = 178/211 (84%), Gaps = 1/211 (0%)
Frame = +2
Query: 23 EEMKFIHSLELYKDAAMIVINKPPGMPVQGGLGIKSSLDELAAKYLRYDYSESPRLVHRL 202
+++ FI SL +YKD ++V+NKPPGMPVQGG+ IK SLD +AA+ L YDYS+ PRLVHRL
Sbjct: 130 KQINFIRSLVIYKDPHILVLNKPPGMPVQGGINIKLSLDAVAAQSLNYDYSQPPRLVHRL 189
Query: 203 DRDSSGILVMGRTQLSTTILHSIFREKTFGASNDVPGSDRI-LQKKYYALVIGSPRRREG 379
DRD SGILVMGRT+ ST +LHSIFREKT ASN+ +++I LQ++Y+ALV+G PRR G
Sbjct: 190 DRDCSGILVMGRTKTSTALLHSIFREKTSRASNEENDTEKIILQRRYWALVLGCPRRSGG 249
Query: 380 LISVPLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSPLTGRKH 559
+++ PL KVVVDNGKS+RIT+VDN+ LS QH+ TEYRVISSS G+TWLELSPLTGRKH
Sbjct: 250 VVNAPLGKVVVDNGKSDRITIVDNSALLSSQHAVTEYRVISSSSHGFTWLELSPLTGRKH 309
Query: 560 QLRVHCAEVLGTPIVGDYKYGWQAHKKLGQY 652
QLRVHCAEVLGTPIVGDYKYG QAHKK GQ+
Sbjct: 310 QLRVHCAEVLGTPIVGDYKYGRQAHKKWGQF 340
>ref|XP_006847251.1| hypothetical protein AMTR_s00015p00025410 [Amborella trichopoda]
gi|548850328|gb|ERN08832.1| hypothetical protein
AMTR_s00015p00025410 [Amborella trichopoda]
Length = 457
Score = 297 bits (761), Expect = 2e-78
Identities = 145/210 (69%), Positives = 177/210 (84%), Gaps = 2/210 (0%)
Frame = +2
Query: 17 NEEEMKFIHSLELYKDAAMIVINKPPGMPVQGGLGIKSSLDELAAKYLRYDYSESPRLVH 196
N+EEM++I SLE+YKDAA++V+NKPPG+PVQGG G+K SLD L A L+YDYSE PRLVH
Sbjct: 158 NKEEMEYIRSLEVYKDAAIVVVNKPPGLPVQGGTGVKLSLDVLVASSLKYDYSEVPRLVH 217
Query: 197 RLDRDSSGILVMGRTQLSTTILHSIFREKTFGASN--DVPGSDRILQKKYYALVIGSPRR 370
RLD+DSSGILVMGRTQ STT+LHSIFR+KT GAS D+ S IL++KY+ALVIG+P+
Sbjct: 218 RLDQDSSGILVMGRTQESTTLLHSIFRDKTCGASFNVDIKNSKIILKRKYWALVIGNPQP 277
Query: 371 REGLISVPLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSPLTG 550
EGLIS PL K+++D+GKSERITV +++ S +H+ TEYRV+ SS G+TWLEL P TG
Sbjct: 278 SEGLISAPLSKLLLDDGKSERITVSEDSKNKSARHAITEYRVLRSSGHGFTWLELYPRTG 337
Query: 551 RKHQLRVHCAEVLGTPIVGDYKYGWQAHKK 640
RKHQLRVHCAEVLGTPI+GDYKYGW AH+K
Sbjct: 338 RKHQLRVHCAEVLGTPILGDYKYGWNAHRK 367
>ref|XP_004170490.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Cucumis
sativus]
Length = 471
Score = 295 bits (754), Expect = 1e-77
Identities = 145/214 (67%), Positives = 174/214 (81%), Gaps = 3/214 (1%)
Frame = +2
Query: 5 QSFSNEEEMKFIHSLELYKDAAMIVINKPPGMPVQGGLGIKSSLDELAAKYLRYDYSESP 184
+ + N+EE F+HSL L+KD A++VINKPPG+PVQGG+G+K SLDELAA L Y YSE P
Sbjct: 172 RDYCNKEEETFMHSLVLHKDPAILVINKPPGLPVQGGIGVKRSLDELAASCLSYGYSEPP 231
Query: 185 RLVHRLDRDSSGILVMGRTQLSTTILHSIFREKTFGAS---NDVPGSDRILQKKYYALVI 355
RLVHRLDRDSSGIL+MGRT ST++LHS+FREKTF AS N V +IL K+Y+ALVI
Sbjct: 232 RLVHRLDRDSSGILIMGRTSTSTSLLHSVFREKTFEASKHANHVDSEKKILLKRYWALVI 291
Query: 356 GSPRRREGLISVPLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLEL 535
GSPRR +GLI+ PL K+V+D+G+SE+I V+DN + Q + T+Y+VI S GYTWLEL
Sbjct: 292 GSPRRSKGLITAPLGKIVLDDGRSEQIMVIDNAEPMPFQQAITQYKVIKSH-HGYTWLEL 350
Query: 536 SPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHK 637
PLTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHK
Sbjct: 351 CPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHK 384
>ref|XP_004137095.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Cucumis
sativus]
Length = 466
Score = 295 bits (754), Expect = 1e-77
Identities = 145/214 (67%), Positives = 174/214 (81%), Gaps = 3/214 (1%)
Frame = +2
Query: 5 QSFSNEEEMKFIHSLELYKDAAMIVINKPPGMPVQGGLGIKSSLDELAAKYLRYDYSESP 184
+ + N+EE F+HSL L+KD A++VINKPPG+PVQGG+G+K SLDELAA L Y YSE P
Sbjct: 167 RDYCNKEEETFMHSLVLHKDPAILVINKPPGLPVQGGIGVKRSLDELAASCLSYGYSEPP 226
Query: 185 RLVHRLDRDSSGILVMGRTQLSTTILHSIFREKTFGAS---NDVPGSDRILQKKYYALVI 355
RLVHRLDRDSSGIL+MGRT ST++LHS+FREKTF AS N V +IL K+Y+ALVI
Sbjct: 227 RLVHRLDRDSSGILIMGRTSTSTSLLHSVFREKTFEASKHANHVDSEKKILLKRYWALVI 286
Query: 356 GSPRRREGLISVPLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLEL 535
GSPRR +GLI+ PL K+V+D+G+SE+I V+DN + Q + T+Y+VI S GYTWLEL
Sbjct: 287 GSPRRSKGLITAPLGKIVLDDGRSEQIMVIDNAEPMPFQQAITQYKVIKSH-HGYTWLEL 345
Query: 536 SPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHK 637
PLTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHK
Sbjct: 346 CPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHK 379