BLASTX nr result
ID: Rehmannia22_contig00029276
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00029276
(491 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002274648.1| PREDICTED: KH domain-containing protein At5g... 66 5e-09
ref|XP_006346087.1| PREDICTED: KH domain-containing protein At5g... 63 5e-08
ref|XP_006346086.1| PREDICTED: KH domain-containing protein At5g... 63 5e-08
ref|XP_004244007.1| PREDICTED: KH domain-containing protein At5g... 63 5e-08
ref|XP_004244006.1| PREDICTED: KH domain-containing protein At5g... 63 5e-08
ref|XP_006857601.1| hypothetical protein AMTR_s00061p00100880 [A... 61 2e-07
gb|EOY11853.1| RNA-binding KH domain-containing protein [Theobro... 61 2e-07
ref|XP_002864436.1| KH domain-containing protein [Arabidopsis ly... 59 5e-07
ref|XP_002299073.2| KH domain-containing family protein [Populus... 59 9e-07
ref|XP_006280844.1| hypothetical protein CARUB_v10026819mg [Caps... 59 9e-07
ref|XP_006280843.1| hypothetical protein CARUB_v10026819mg [Caps... 59 9e-07
gb|ABK93571.1| unknown [Populus trichocarpa] 59 9e-07
gb|AFW63662.1| hypothetical protein ZEAMMB73_233372, partial [Ze... 58 1e-06
gb|AFW63660.1| hypothetical protein ZEAMMB73_233372 [Zea mays] 58 1e-06
gb|ACN35020.1| unknown [Zea mays] gi|413923729|gb|AFW63661.1| hy... 58 1e-06
ref|XP_002532938.1| nucleic acid binding protein, putative [Rici... 58 1e-06
ref|NP_200425.1| KH domain-containing protein [Arabidopsis thali... 58 1e-06
dbj|BAH57043.1| AT5G56140 [Arabidopsis thaliana] 58 1e-06
gb|AAL87326.1| putative RNA-binding protein [Arabidopsis thaliana] 58 1e-06
gb|ESW20642.1| hypothetical protein PHAVU_005G003500g [Phaseolus... 57 2e-06
>ref|XP_002274648.1| PREDICTED: KH domain-containing protein At5g56140 isoform 1 [Vitis
vinifera] gi|296089986|emb|CBI39805.3| unnamed protein
product [Vitis vinifera]
Length = 287
Score = 65.9 bits (159), Expect = 5e-09
Identities = 37/69 (53%), Positives = 43/69 (62%)
Frame = -2
Query: 208 MSSGRYMAYXXXXXXXXXXHIXXXXXXXXXXXASVLIEQEKYLSELLSERNKISPFIAVL 29
MSSGRYMAY S L+EQEKYLSELL+ER+K+SPF+ VL
Sbjct: 1 MSSGRYMAYSPSPSTAPHSP----HIAGLRSATSALVEQEKYLSELLAERHKLSPFMPVL 56
Query: 28 PYSYRLLNQ 2
P+SYRLLNQ
Sbjct: 57 PHSYRLLNQ 65
>ref|XP_006346087.1| PREDICTED: KH domain-containing protein At5g56140-like isoform X2
[Solanum tuberosum]
Length = 289
Score = 62.8 bits (151), Expect = 5e-08
Identities = 36/69 (52%), Positives = 42/69 (60%)
Frame = -2
Query: 208 MSSGRYMAYXXXXXXXXXXHIXXXXXXXXXXXASVLIEQEKYLSELLSERNKISPFIAVL 29
MSSGRYMAY HI S + EQEKYLSELL+ER+K+ PF+ VL
Sbjct: 1 MSSGRYMAYSPSPSAPQSPHIAGLRSAS-----SAIAEQEKYLSELLAERHKLGPFVPVL 55
Query: 28 PYSYRLLNQ 2
P+ YRLLNQ
Sbjct: 56 PHCYRLLNQ 64
>ref|XP_006346086.1| PREDICTED: KH domain-containing protein At5g56140-like isoform X1
[Solanum tuberosum]
Length = 293
Score = 62.8 bits (151), Expect = 5e-08
Identities = 36/69 (52%), Positives = 42/69 (60%)
Frame = -2
Query: 208 MSSGRYMAYXXXXXXXXXXHIXXXXXXXXXXXASVLIEQEKYLSELLSERNKISPFIAVL 29
MSSGRYMAY HI S + EQEKYLSELL+ER+K+ PF+ VL
Sbjct: 1 MSSGRYMAYSPSPSAPQSPHIAGLRSAS-----SAIAEQEKYLSELLAERHKLGPFVPVL 55
Query: 28 PYSYRLLNQ 2
P+ YRLLNQ
Sbjct: 56 PHCYRLLNQ 64
>ref|XP_004244007.1| PREDICTED: KH domain-containing protein At5g56140-like isoform 2
[Solanum lycopersicum]
Length = 295
Score = 62.8 bits (151), Expect = 5e-08
Identities = 36/69 (52%), Positives = 42/69 (60%)
Frame = -2
Query: 208 MSSGRYMAYXXXXXXXXXXHIXXXXXXXXXXXASVLIEQEKYLSELLSERNKISPFIAVL 29
MSSGRYMAY HI S + EQEKYLSELL+ER+K+ PF+ VL
Sbjct: 1 MSSGRYMAYSPSPSAPQSPHIAGLRSAS-----SAIAEQEKYLSELLAERHKLGPFVPVL 55
Query: 28 PYSYRLLNQ 2
P+ YRLLNQ
Sbjct: 56 PHCYRLLNQ 64
>ref|XP_004244006.1| PREDICTED: KH domain-containing protein At5g56140-like isoform 1
[Solanum lycopersicum]
Length = 299
Score = 62.8 bits (151), Expect = 5e-08
Identities = 36/69 (52%), Positives = 42/69 (60%)
Frame = -2
Query: 208 MSSGRYMAYXXXXXXXXXXHIXXXXXXXXXXXASVLIEQEKYLSELLSERNKISPFIAVL 29
MSSGRYMAY HI S + EQEKYLSELL+ER+K+ PF+ VL
Sbjct: 1 MSSGRYMAYSPSPSAPQSPHIAGLRSAS-----SAIAEQEKYLSELLAERHKLGPFVPVL 55
Query: 28 PYSYRLLNQ 2
P+ YRLLNQ
Sbjct: 56 PHCYRLLNQ 64
>ref|XP_006857601.1| hypothetical protein AMTR_s00061p00100880 [Amborella trichopoda]
gi|548861697|gb|ERN19068.1| hypothetical protein
AMTR_s00061p00100880 [Amborella trichopoda]
Length = 286
Score = 60.8 bits (146), Expect = 2e-07
Identities = 33/69 (47%), Positives = 41/69 (59%)
Frame = -2
Query: 208 MSSGRYMAYXXXXXXXXXXHIXXXXXXXXXXXASVLIEQEKYLSELLSERNKISPFIAVL 29
MSSGRYMAY + L+EQ+KYLSELL+ER K+ PF+ VL
Sbjct: 1 MSSGRYMAYSPSPSTAPHSPFRSAA--------TALVEQDKYLSELLAERQKLGPFMQVL 52
Query: 28 PYSYRLLNQ 2
P+SYR+LNQ
Sbjct: 53 PHSYRVLNQ 61
>gb|EOY11853.1| RNA-binding KH domain-containing protein [Theobroma cacao]
Length = 312
Score = 60.8 bits (146), Expect = 2e-07
Identities = 31/66 (46%), Positives = 42/66 (63%)
Frame = -2
Query: 199 GRYMAYXXXXXXXXXXHIXXXXXXXXXXXASVLIEQEKYLSELLSERNKISPFIAVLPYS 20
GRYMAY H+ ++ ++QEKYLSELL+ER+K+SPF+ VLP++
Sbjct: 9 GRYMAYSPSPSAPHSPHLSGLRSAAAAASSAAFLDQEKYLSELLAERHKLSPFMPVLPHT 68
Query: 19 YRLLNQ 2
YRLLNQ
Sbjct: 69 YRLLNQ 74
>ref|XP_002864436.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297310271|gb|EFH40695.1| KH domain-containing protein
[Arabidopsis lyrata subsp. lyrata]
Length = 308
Score = 59.3 bits (142), Expect = 5e-07
Identities = 26/36 (72%), Positives = 34/36 (94%)
Frame = -2
Query: 109 SVLIEQEKYLSELLSERNKISPFIAVLPYSYRLLNQ 2
SV +EQEKYLSELL+ER+K++PF+ VLP++YRLLNQ
Sbjct: 51 SVFVEQEKYLSELLAERHKLTPFLPVLPHAYRLLNQ 86
>ref|XP_002299073.2| KH domain-containing family protein [Populus trichocarpa]
gi|550350090|gb|EEE83878.2| KH domain-containing family
protein [Populus trichocarpa]
Length = 302
Score = 58.5 bits (140), Expect = 9e-07
Identities = 33/69 (47%), Positives = 44/69 (63%)
Frame = -2
Query: 208 MSSGRYMAYXXXXXXXXXXHIXXXXXXXXXXXASVLIEQEKYLSELLSERNKISPFIAVL 29
+ +GR+MAY HI ++++EQEKYLSELL+ER+KISPF+ VL
Sbjct: 11 VGAGRFMAYSPSPSAPHSPHISGLRSSAASS--ALVVEQEKYLSELLAERHKISPFLPVL 68
Query: 28 PYSYRLLNQ 2
P +YRLLNQ
Sbjct: 69 PNTYRLLNQ 77
>ref|XP_006280844.1| hypothetical protein CARUB_v10026819mg [Capsella rubella]
gi|482549548|gb|EOA13742.1| hypothetical protein
CARUB_v10026819mg [Capsella rubella]
Length = 311
Score = 58.5 bits (140), Expect = 9e-07
Identities = 31/70 (44%), Positives = 39/70 (55%)
Frame = -2
Query: 211 AMSSGRYMAYXXXXXXXXXXHIXXXXXXXXXXXASVLIEQEKYLSELLSERNKISPFIAV 32
A GR+M Y SV +EQEKYLSELL+ER+K+ PF+ V
Sbjct: 19 AGGGGRFMTYSSSLSVPPSAPQSPNYSGGLRSQPSVFVEQEKYLSELLAERHKLIPFLPV 78
Query: 31 LPYSYRLLNQ 2
LP++YRLLNQ
Sbjct: 79 LPHAYRLLNQ 88
>ref|XP_006280843.1| hypothetical protein CARUB_v10026819mg [Capsella rubella]
gi|482549547|gb|EOA13741.1| hypothetical protein
CARUB_v10026819mg [Capsella rubella]
Length = 275
Score = 58.5 bits (140), Expect = 9e-07
Identities = 31/70 (44%), Positives = 39/70 (55%)
Frame = -2
Query: 211 AMSSGRYMAYXXXXXXXXXXHIXXXXXXXXXXXASVLIEQEKYLSELLSERNKISPFIAV 32
A GR+M Y SV +EQEKYLSELL+ER+K+ PF+ V
Sbjct: 19 AGGGGRFMTYSSSLSVPPSAPQSPNYSGGLRSQPSVFVEQEKYLSELLAERHKLIPFLPV 78
Query: 31 LPYSYRLLNQ 2
LP++YRLLNQ
Sbjct: 79 LPHAYRLLNQ 88
>gb|ABK93571.1| unknown [Populus trichocarpa]
Length = 89
Score = 58.5 bits (140), Expect = 9e-07
Identities = 33/69 (47%), Positives = 44/69 (63%)
Frame = -2
Query: 208 MSSGRYMAYXXXXXXXXXXHIXXXXXXXXXXXASVLIEQEKYLSELLSERNKISPFIAVL 29
+ +GR+MAY HI ++++EQEKYLSELL+ER+KISPF+ VL
Sbjct: 11 VGAGRFMAYSPSPSAPHSPHISGLRSSAASS--ALVVEQEKYLSELLAERHKISPFLPVL 68
Query: 28 PYSYRLLNQ 2
P +YRLLNQ
Sbjct: 69 PNTYRLLNQ 77
>gb|AFW63662.1| hypothetical protein ZEAMMB73_233372, partial [Zea mays]
Length = 179
Score = 58.2 bits (139), Expect = 1e-06
Identities = 33/69 (47%), Positives = 42/69 (60%)
Frame = -2
Query: 208 MSSGRYMAYXXXXXXXXXXHIXXXXXXXXXXXASVLIEQEKYLSELLSERNKISPFIAVL 29
MSSGRYMAY ++ + EQEKYLSELL+ER+K++PFI V+
Sbjct: 104 MSSGRYMAYSPSPSTTPHSP----RIHGLRTPSAAVAEQEKYLSELLAERHKLTPFIPVI 159
Query: 28 PYSYRLLNQ 2
P+S RLLNQ
Sbjct: 160 PHSVRLLNQ 168
>gb|AFW63660.1| hypothetical protein ZEAMMB73_233372 [Zea mays]
Length = 197
Score = 58.2 bits (139), Expect = 1e-06
Identities = 33/69 (47%), Positives = 42/69 (60%)
Frame = -2
Query: 208 MSSGRYMAYXXXXXXXXXXHIXXXXXXXXXXXASVLIEQEKYLSELLSERNKISPFIAVL 29
MSSGRYMAY ++ + EQEKYLSELL+ER+K++PFI V+
Sbjct: 1 MSSGRYMAYSPSPSTTPHSP----RIHGLRTPSAAVAEQEKYLSELLAERHKLTPFIPVI 56
Query: 28 PYSYRLLNQ 2
P+S RLLNQ
Sbjct: 57 PHSVRLLNQ 65
>gb|ACN35020.1| unknown [Zea mays] gi|413923729|gb|AFW63661.1| hypothetical protein
ZEAMMB73_233372 [Zea mays]
Length = 286
Score = 58.2 bits (139), Expect = 1e-06
Identities = 33/69 (47%), Positives = 42/69 (60%)
Frame = -2
Query: 208 MSSGRYMAYXXXXXXXXXXHIXXXXXXXXXXXASVLIEQEKYLSELLSERNKISPFIAVL 29
MSSGRYMAY ++ + EQEKYLSELL+ER+K++PFI V+
Sbjct: 1 MSSGRYMAYSPSPSTTPHSP----RIHGLRTPSAAVAEQEKYLSELLAERHKLTPFIPVI 56
Query: 28 PYSYRLLNQ 2
P+S RLLNQ
Sbjct: 57 PHSVRLLNQ 65
>ref|XP_002532938.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223527289|gb|EEF29442.1| nucleic acid binding
protein, putative [Ricinus communis]
Length = 300
Score = 58.2 bits (139), Expect = 1e-06
Identities = 26/36 (72%), Positives = 34/36 (94%)
Frame = -2
Query: 109 SVLIEQEKYLSELLSERNKISPFIAVLPYSYRLLNQ 2
S L+EQEKYLSELL+ER+K+SPF+ VLP++YRLL+Q
Sbjct: 40 SALVEQEKYLSELLAERHKLSPFMPVLPHTYRLLSQ 75
>ref|NP_200425.1| KH domain-containing protein [Arabidopsis thaliana]
gi|75262628|sp|Q9FKT4.1|QKIL2_ARATH RecName: Full=KH
domain-containing protein At5g56140; AltName:
Full=Quaking-like protein 2 gi|9758634|dbj|BAB09296.1|
RNA-binding protein-like [Arabidopsis thaliana]
gi|24030184|gb|AAN41273.1| putative RNA-binding protein
[Arabidopsis thaliana] gi|332009342|gb|AED96725.1| KH
domain-containing protein [Arabidopsis thaliana]
Length = 315
Score = 57.8 bits (138), Expect = 1e-06
Identities = 25/36 (69%), Positives = 34/36 (94%)
Frame = -2
Query: 109 SVLIEQEKYLSELLSERNKISPFIAVLPYSYRLLNQ 2
SV +EQEKYLSELL+ER+K++PF+ VLP+++RLLNQ
Sbjct: 57 SVFVEQEKYLSELLAERHKLTPFLPVLPHAFRLLNQ 92
>dbj|BAH57043.1| AT5G56140 [Arabidopsis thaliana]
Length = 104
Score = 57.8 bits (138), Expect = 1e-06
Identities = 25/36 (69%), Positives = 34/36 (94%)
Frame = -2
Query: 109 SVLIEQEKYLSELLSERNKISPFIAVLPYSYRLLNQ 2
SV +EQEKYLSELL+ER+K++PF+ VLP+++RLLNQ
Sbjct: 57 SVFVEQEKYLSELLAERHKLTPFLPVLPHAFRLLNQ 92
>gb|AAL87326.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 260
Score = 57.8 bits (138), Expect = 1e-06
Identities = 25/36 (69%), Positives = 34/36 (94%)
Frame = -2
Query: 109 SVLIEQEKYLSELLSERNKISPFIAVLPYSYRLLNQ 2
SV +EQEKYLSELL+ER+K++PF+ VLP+++RLLNQ
Sbjct: 2 SVFVEQEKYLSELLAERHKLTPFLPVLPHAFRLLNQ 37
>gb|ESW20642.1| hypothetical protein PHAVU_005G003500g [Phaseolus vulgaris]
Length = 291
Score = 57.4 bits (137), Expect = 2e-06
Identities = 27/36 (75%), Positives = 31/36 (86%)
Frame = -2
Query: 109 SVLIEQEKYLSELLSERNKISPFIAVLPYSYRLLNQ 2
S L EQ+KYLSELL ERNK+SPF+AVLP +RLLNQ
Sbjct: 31 SALAEQDKYLSELLGERNKLSPFMAVLPQCFRLLNQ 66