BLASTX nr result
ID: Rehmannia22_contig00029191
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00029191
(496 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EPS61302.1| hypothetical protein M569_13492 [Genlisea aurea] 113 3e-23
ref|XP_002265397.2| PREDICTED: pentatricopeptide repeat-containi... 91 1e-16
emb|CBI15328.3| unnamed protein product [Vitis vinifera] 91 1e-16
ref|XP_006345106.1| PREDICTED: pentatricopeptide repeat-containi... 90 3e-16
ref|XP_004236066.1| PREDICTED: pentatricopeptide repeat-containi... 88 1e-15
ref|XP_003536123.1| PREDICTED: pentatricopeptide repeat-containi... 81 2e-13
ref|XP_003630353.1| Pentatricopeptide repeat-containing protein ... 81 2e-13
gb|AFK45023.1| unknown [Medicago truncatula] 81 2e-13
ref|XP_006394550.1| hypothetical protein EUTSA_v10004006mg [Eutr... 80 4e-13
ref|XP_006282075.1| hypothetical protein CARUB_v10028321mg [Caps... 80 4e-13
ref|NP_200904.1| pentatricopeptide repeat-containing protein [Ar... 79 5e-13
gb|AAM63453.1| unknown [Arabidopsis thaliana] 79 5e-13
ref|XP_006477702.1| PREDICTED: pentatricopeptide repeat-containi... 79 6e-13
ref|XP_006440794.1| hypothetical protein CICLE_v10019809mg [Citr... 79 6e-13
ref|XP_002866406.1| pentatricopeptide repeat-containing protein ... 78 1e-12
gb|ESW16823.1| hypothetical protein PHAVU_007G187600g [Phaseolus... 78 1e-12
ref|XP_003556470.1| PREDICTED: pentatricopeptide repeat-containi... 78 1e-12
ref|XP_004503897.1| PREDICTED: pentatricopeptide repeat-containi... 75 7e-12
gb|EOY22114.1| Pentatricopeptide repeat-containing protein, puta... 73 3e-11
ref|XP_004138218.1| PREDICTED: pentatricopeptide repeat-containi... 72 6e-11
>gb|EPS61302.1| hypothetical protein M569_13492 [Genlisea aurea]
Length = 536
Score = 113 bits (282), Expect = 3e-23
Identities = 62/105 (59%), Positives = 72/105 (68%), Gaps = 2/105 (1%)
Frame = +3
Query: 186 ARFPCFSIRHFSSETDNTDASSDNENPEKIGEEEKSIAELFSSELQKNP--DAEPLPLPK 359
++F S+R FSS TD D + EEE ++A+L S EL+KN + E LPL K
Sbjct: 53 SQFRGLSVRFFSSRTDEDDDGA-RSTARASEEEEGALAKLISDELRKNRQGEGEVLPLAK 111
Query: 360 RLDLSFSHITVTPTLLLATLNISPDAGRMALDFLKWAKSRPDFQP 494
RLDLSFSH+TVTP LLLATLNISPDAGR LDFL WAKSRP F P
Sbjct: 112 RLDLSFSHVTVTPALLLATLNISPDAGRTVLDFLTWAKSRPGFSP 156
>ref|XP_002265397.2| PREDICTED: pentatricopeptide repeat-containing protein At5g60960,
mitochondrial-like [Vitis vinifera]
Length = 516
Score = 91.3 bits (225), Expect = 1e-16
Identities = 46/97 (47%), Positives = 59/97 (60%)
Frame = +3
Query: 198 CFSIRHFSSETDNTDASSDNENPEKIGEEEKSIAELFSSELQKNPDAEPLPLPKRLDLSF 377
C S RHF S + ++ ++ IA+ SSEL K+PD+EP+P+ +RL LSF
Sbjct: 41 CSSQRHFVSPSFPLSRRFSSQPNNSADDDHSQIAQSLSSELLKDPDSEPVPIIQRLQLSF 100
Query: 378 SHITVTPTLLLATLNISPDAGRMALDFLKWAKSRPDF 488
SHIT +P L+L TLN SPDAGR L F KW S P F
Sbjct: 101 SHITPSPPLILQTLNTSPDAGRTVLGFYKWLSSNPKF 137
>emb|CBI15328.3| unnamed protein product [Vitis vinifera]
Length = 532
Score = 91.3 bits (225), Expect = 1e-16
Identities = 46/97 (47%), Positives = 59/97 (60%)
Frame = +3
Query: 198 CFSIRHFSSETDNTDASSDNENPEKIGEEEKSIAELFSSELQKNPDAEPLPLPKRLDLSF 377
C S RHF S + ++ ++ IA+ SSEL K+PD+EP+P+ +RL LSF
Sbjct: 57 CSSQRHFVSPSFPLSRRFSSQPNNSADDDHSQIAQSLSSELLKDPDSEPVPIIQRLQLSF 116
Query: 378 SHITVTPTLLLATLNISPDAGRMALDFLKWAKSRPDF 488
SHIT +P L+L TLN SPDAGR L F KW S P F
Sbjct: 117 SHITPSPPLILQTLNTSPDAGRTVLGFYKWLSSNPKF 153
>ref|XP_006345106.1| PREDICTED: pentatricopeptide repeat-containing protein PNM1,
mitochondrial-like [Solanum tuberosum]
Length = 521
Score = 90.1 bits (222), Expect = 3e-16
Identities = 47/100 (47%), Positives = 64/100 (64%)
Frame = +3
Query: 192 FPCFSIRHFSSETDNTDASSDNENPEKIGEEEKSIAELFSSELQKNPDAEPLPLPKRLDL 371
+ FS H+S T S + PE ++E++ A+ SSEL K DAE L +P+ LDL
Sbjct: 49 YDSFSFSHYS-----TSFRSFSSQPES--DQEETTAQSLSSELVKELDAESLSIPQSLDL 101
Query: 372 SFSHITVTPTLLLATLNISPDAGRMALDFLKWAKSRPDFQ 491
SFSH+ +TP+L+L TLN+SPDAGR L F KW KS+ F+
Sbjct: 102 SFSHVNLTPSLILTTLNLSPDAGRTVLGFFKWVKSKESFK 141
>ref|XP_004236066.1| PREDICTED: pentatricopeptide repeat-containing protein At5g60960,
mitochondrial-like [Solanum lycopersicum]
Length = 522
Score = 88.2 bits (217), Expect = 1e-15
Identities = 44/100 (44%), Positives = 63/100 (63%)
Frame = +3
Query: 192 FPCFSIRHFSSETDNTDASSDNENPEKIGEEEKSIAELFSSELQKNPDAEPLPLPKRLDL 371
+ FS H+S+ + + S + +E++ A+ SSEL K DAE L +P+ LDL
Sbjct: 49 YDSFSFSHYSTSFRSFSSQSGRD-------QEETTAQSLSSELVKELDAESLSIPQSLDL 101
Query: 372 SFSHITVTPTLLLATLNISPDAGRMALDFLKWAKSRPDFQ 491
SFSH+ +TP+L+L TLN+SPDAGR L F KW KS+ F+
Sbjct: 102 SFSHVNLTPSLILTTLNLSPDAGRTVLGFFKWVKSKESFK 141
>ref|XP_003536123.1| PREDICTED: pentatricopeptide repeat-containing protein PNM1,
mitochondrial-like [Glycine max]
Length = 509
Score = 80.9 bits (198), Expect = 2e-13
Identities = 45/96 (46%), Positives = 54/96 (56%)
Frame = +3
Query: 201 FSIRHFSSETDNTDASSDNENPEKIGEEEKSIAELFSSELQKNPDAEPLPLPKRLDLSFS 380
F RHFSSET + IA SSEL K PD++ L + +RL+LSFS
Sbjct: 52 FITRHFSSETQTDE-----------------IASSLSSELLKEPDSDALSVSQRLNLSFS 94
Query: 381 HITVTPTLLLATLNISPDAGRMALDFLKWAKSRPDF 488
HIT TP L+L TLN+SP AGR L F +W S P F
Sbjct: 95 HITPTPNLILQTLNLSPQAGRTVLGFHQWLSSNPQF 130
>ref|XP_003630353.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524375|gb|AET04829.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 620
Score = 80.9 bits (198), Expect = 2e-13
Identities = 45/96 (46%), Positives = 57/96 (59%)
Frame = +3
Query: 201 FSIRHFSSETDNTDASSDNENPEKIGEEEKSIAELFSSELQKNPDAEPLPLPKRLDLSFS 380
F I HFSSE+ S+ +P IA SSEL K PD++P + +RL+LSFS
Sbjct: 57 FQIEHFSSESKPEPVSTTEPDP---------IAIAISSELLKEPDSDPSSVTQRLNLSFS 107
Query: 381 HITVTPTLLLATLNISPDAGRMALDFLKWAKSRPDF 488
HIT TP L+L TLN+S +AGR L F +W S P F
Sbjct: 108 HITPTPNLILETLNLSLEAGRNVLGFHQWLASNPKF 143
>gb|AFK45023.1| unknown [Medicago truncatula]
Length = 521
Score = 80.9 bits (198), Expect = 2e-13
Identities = 45/96 (46%), Positives = 57/96 (59%)
Frame = +3
Query: 201 FSIRHFSSETDNTDASSDNENPEKIGEEEKSIAELFSSELQKNPDAEPLPLPKRLDLSFS 380
F I HFSSE+ S+ +P IA SSEL K PD++P + +RL+LSFS
Sbjct: 57 FQIEHFSSESKPEPVSTTEPDP---------IAIAISSELLKEPDSDPSSVTQRLNLSFS 107
Query: 381 HITVTPTLLLATLNISPDAGRMALDFLKWAKSRPDF 488
HIT TP L+L TLN+S +AGR L F +W S P F
Sbjct: 108 HITPTPNLILETLNLSLEAGRNVLGFHQWLASNPKF 143
>ref|XP_006394550.1| hypothetical protein EUTSA_v10004006mg [Eutrema salsugineum]
gi|557091189|gb|ESQ31836.1| hypothetical protein
EUTSA_v10004006mg [Eutrema salsugineum]
Length = 518
Score = 79.7 bits (195), Expect = 4e-13
Identities = 45/100 (45%), Positives = 57/100 (57%)
Frame = +3
Query: 189 RFPCFSIRHFSSETDNTDASSDNENPEKIGEEEKSIAELFSSELQKNPDAEPLPLPKRLD 368
RF F R FSSET+ ++ + + N IA FS EL NP+AEP + +
Sbjct: 46 RFSLFPYRFFSSETNAAESETLDSN---------QIALSFSKELTGNPEAEPQSISQSFQ 96
Query: 369 LSFSHITVTPTLLLATLNISPDAGRMALDFLKWAKSRPDF 488
LSFSHIT P L+L TLN+SP+AGR AL F +W S F
Sbjct: 97 LSFSHITPNPDLILQTLNLSPEAGRAALGFNEWLDSNSGF 136
>ref|XP_006282075.1| hypothetical protein CARUB_v10028321mg [Capsella rubella]
gi|482550779|gb|EOA14973.1| hypothetical protein
CARUB_v10028321mg [Capsella rubella]
Length = 522
Score = 79.7 bits (195), Expect = 4e-13
Identities = 50/108 (46%), Positives = 61/108 (56%)
Frame = +3
Query: 165 PSAAFTCARFPCFSIRHFSSETDNTDASSDNENPEKIGEEEKSIAELFSSELQKNPDAEP 344
PS + FPC R FSSET N D+ S + N IA FS EL NP+AE
Sbjct: 46 PSRPSIFSTFPC---RFFSSET-NADSESSDPN---------QIALSFSKELTGNPEAES 92
Query: 345 LPLPKRLDLSFSHITVTPTLLLATLNISPDAGRMALDFLKWAKSRPDF 488
+ +R +LSFSHIT P L+L TLN+SP+AGR AL F +W S F
Sbjct: 93 HSISQRFNLSFSHITPNPDLILQTLNLSPEAGRAALGFNEWLDSSNGF 140
>ref|NP_200904.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75262710|sp|Q9FME4.1|PP438_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein PNM1,
mitochondrial; AltName: Full=PPR PROTEIN LOCALIZED TO
THE NUCLEUS AND MITOCHONDRIA 1; Flags: Precursor
gi|10177319|dbj|BAB10645.1| unnamed protein product
[Arabidopsis thaliana] gi|332010020|gb|AED97403.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 521
Score = 79.3 bits (194), Expect = 5e-13
Identities = 48/110 (43%), Positives = 59/110 (53%)
Frame = +3
Query: 159 FLPSAAFTCARFPCFSIRHFSSETDNTDASSDNENPEKIGEEEKSIAELFSSELQKNPDA 338
F P + F F R FSSET+ S D+ IA FS EL NPDA
Sbjct: 40 FSPLPPSRSSIFSTFPSRFFSSETNAESESLDSNE----------IALSFSKELTGNPDA 89
Query: 339 EPLPLPKRLDLSFSHITVTPTLLLATLNISPDAGRMALDFLKWAKSRPDF 488
E + +R +LSFSHIT P L+L TLN+SP+AGR AL F +W S +F
Sbjct: 90 ESQTISQRFNLSFSHITPNPDLILQTLNLSPEAGRAALGFNEWLDSNSNF 139
>gb|AAM63453.1| unknown [Arabidopsis thaliana]
Length = 521
Score = 79.3 bits (194), Expect = 5e-13
Identities = 48/110 (43%), Positives = 59/110 (53%)
Frame = +3
Query: 159 FLPSAAFTCARFPCFSIRHFSSETDNTDASSDNENPEKIGEEEKSIAELFSSELQKNPDA 338
F P + F F R FSSET+ S D+ IA FS EL NPDA
Sbjct: 40 FSPLPPSRSSIFSTFPSRFFSSETNAESESLDSNE----------IALSFSKELTGNPDA 89
Query: 339 EPLPLPKRLDLSFSHITVTPTLLLATLNISPDAGRMALDFLKWAKSRPDF 488
E + +R +LSFSHIT P L+L TLN+SP+AGR AL F +W S +F
Sbjct: 90 ESQTISQRFNLSFSHITPNPDLILQTLNLSPEAGRAALGFNEWLDSNSNF 139
>ref|XP_006477702.1| PREDICTED: pentatricopeptide repeat-containing protein PNM1,
mitochondrial-like [Citrus sinensis]
Length = 503
Score = 79.0 bits (193), Expect = 6e-13
Identities = 40/99 (40%), Positives = 58/99 (58%)
Frame = +3
Query: 192 FPCFSIRHFSSETDNTDASSDNENPEKIGEEEKSIAELFSSELQKNPDAEPLPLPKRLDL 371
F FS H+ + +S NP+ I + ++ IA S EL +N +A+PLP+ +RL L
Sbjct: 29 FSRFSPTHYLNFLSKPFSSKPTSNPKTIDDPDQVIARSLSGELLENLEADPLPISQRLHL 88
Query: 372 SFSHITVTPTLLLATLNISPDAGRMALDFLKWAKSRPDF 488
FSH+T TP+L+ +TLN SP+AGR L F W +F
Sbjct: 89 IFSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANF 127
>ref|XP_006440794.1| hypothetical protein CICLE_v10019809mg [Citrus clementina]
gi|557543056|gb|ESR54034.1| hypothetical protein
CICLE_v10019809mg [Citrus clementina]
Length = 503
Score = 79.0 bits (193), Expect = 6e-13
Identities = 40/99 (40%), Positives = 58/99 (58%)
Frame = +3
Query: 192 FPCFSIRHFSSETDNTDASSDNENPEKIGEEEKSIAELFSSELQKNPDAEPLPLPKRLDL 371
F FS H+ + +S NP+ I + ++ IA S EL +N +A+PLP+ +RL L
Sbjct: 29 FSRFSPTHYLNFLSKPFSSKPTSNPKTIDDPDQVIARSLSGELLENLEADPLPISQRLHL 88
Query: 372 SFSHITVTPTLLLATLNISPDAGRMALDFLKWAKSRPDF 488
FSH+T TP+L+ +TLN SP+AGR L F W +F
Sbjct: 89 IFSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANF 127
>ref|XP_002866406.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297312241|gb|EFH42665.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 522
Score = 78.2 bits (191), Expect = 1e-12
Identities = 49/108 (45%), Positives = 60/108 (55%)
Frame = +3
Query: 165 PSAAFTCARFPCFSIRHFSSETDNTDASSDNENPEKIGEEEKSIAELFSSELQKNPDAEP 344
PS + T + FP R FSSET N E + IA FS EL NPDAE
Sbjct: 46 PSRSSTFSTFPS---RLFSSET----------NAESETLDSNEIALSFSKELTGNPDAES 92
Query: 345 LPLPKRLDLSFSHITVTPTLLLATLNISPDAGRMALDFLKWAKSRPDF 488
+ +R +LSFSHIT P L+L TLN+SP+AGR AL F +W S +F
Sbjct: 93 HAISQRFNLSFSHITPNPDLILQTLNLSPEAGRAALGFNEWLDSNSNF 140
>gb|ESW16823.1| hypothetical protein PHAVU_007G187600g [Phaseolus vulgaris]
Length = 505
Score = 77.8 bits (190), Expect = 1e-12
Identities = 47/96 (48%), Positives = 54/96 (56%)
Frame = +3
Query: 201 FSIRHFSSETDNTDASSDNENPEKIGEEEKSIAELFSSELQKNPDAEPLPLPKRLDLSFS 380
F RHFSSET TD IA SSEL K D++PL + +RL LSFS
Sbjct: 49 FLNRHFSSETQ-TDP----------------IANSLSSELLKELDSDPLSVSQRLHLSFS 91
Query: 381 HITVTPTLLLATLNISPDAGRMALDFLKWAKSRPDF 488
HIT TP L+L TLN+SP AGR L F +W S P F
Sbjct: 92 HITPTPNLILQTLNLSPQAGRTVLGFHQWLSSNPQF 127
>ref|XP_003556470.1| PREDICTED: pentatricopeptide repeat-containing protein PNM1,
mitochondrial-like isoformX1 [Glycine max]
Length = 509
Score = 77.8 bits (190), Expect = 1e-12
Identities = 46/96 (47%), Positives = 55/96 (57%)
Frame = +3
Query: 201 FSIRHFSSETDNTDASSDNENPEKIGEEEKSIAELFSSELQKNPDAEPLPLPKRLDLSFS 380
F IRHFSSET TD IA SSEL K PD++ L + +RL LSFS
Sbjct: 53 FIIRHFSSETQ-TD----------------QIAHSLSSELLKEPDSDALSVSQRLHLSFS 95
Query: 381 HITVTPTLLLATLNISPDAGRMALDFLKWAKSRPDF 488
HIT TP L+L TLN+S ++GR L F +W S P F
Sbjct: 96 HITPTPNLILQTLNLSHESGRTVLGFHQWLSSNPQF 131
>ref|XP_004503897.1| PREDICTED: pentatricopeptide repeat-containing protein At5g60960,
mitochondrial-like [Cicer arietinum]
Length = 516
Score = 75.5 bits (184), Expect = 7e-12
Identities = 41/98 (41%), Positives = 57/98 (58%)
Frame = +3
Query: 195 PCFSIRHFSSETDNTDASSDNENPEKIGEEEKSIAELFSSELQKNPDAEPLPLPKRLDLS 374
P F I+HFSS+ + + NE IA SS+L D++P + +RL LS
Sbjct: 50 PLFQIKHFSSKPVSPTQTPPNELDP--------IATALSSQLLNESDSDPSSVAERLHLS 101
Query: 375 FSHITVTPTLLLATLNISPDAGRMALDFLKWAKSRPDF 488
FSHIT TP ++L TL++SP+AGR+ L F +W S P F
Sbjct: 102 FSHITPTPNVILQTLDLSPEAGRIVLGFHQWLASNPKF 139
>gb|EOY22114.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
cacao]
Length = 494
Score = 73.2 bits (178), Expect = 3e-11
Identities = 35/65 (53%), Positives = 45/65 (69%)
Frame = +3
Query: 294 IAELFSSELQKNPDAEPLPLPKRLDLSFSHITVTPTLLLATLNISPDAGRMALDFLKWAK 473
IA+ S+E+ KNPD +PLP+ +RL LSFSHI T L+ TLN+SP+AGR L F W
Sbjct: 51 IAQSLSTEILKNPDLDPLPITQRLQLSFSHIKPTSLLISQTLNLSPEAGRTVLGFNDWLL 110
Query: 474 SRPDF 488
S P+F
Sbjct: 111 SDPNF 115
>ref|XP_004138218.1| PREDICTED: pentatricopeptide repeat-containing protein At5g60960,
mitochondrial-like [Cucumis sativus]
gi|449477122|ref|XP_004154936.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g60960,
mitochondrial-like [Cucumis sativus]
Length = 522
Score = 72.4 bits (176), Expect = 6e-11
Identities = 34/80 (42%), Positives = 50/80 (62%)
Frame = +3
Query: 249 SDNENPEKIGEEEKSIAELFSSELQKNPDAEPLPLPKRLDLSFSHITVTPTLLLATLNIS 428
S + + E + ++ +SEL K+PD++PLP+ +RL LSFSH+ P L+ TLN+S
Sbjct: 63 SHSFSSESVNNHVDQTSQSLASELLKDPDSDPLPITQRLQLSFSHVKPNPELVRNTLNLS 122
Query: 429 PDAGRMALDFLKWAKSRPDF 488
+AGR L F +W S PDF
Sbjct: 123 SEAGRTVLGFNEWLVSNPDF 142