BLASTX nr result

ID: Rehmannia22_contig00029153 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00029153
         (604 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006343941.1| PREDICTED: probable mitochondrial import inn...    72   9e-11
ref|XP_004245573.1| PREDICTED: probable mitochondrial import inn...    66   6e-09

>ref|XP_006343941.1| PREDICTED: probable mitochondrial import inner membrane translocase
           subunit TIM21-like [Solanum tuberosum]
          Length = 312

 Score = 72.4 bits (176), Expect = 9e-11
 Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 26/141 (18%)
 Frame = -1

Query: 346 MQHIKRSGFSMKTQWL--NSLISSYKGLKRW----PSNSVSDAGFANFSSLAAEKSVTSD 185
           MQH++R+GFS+KT+WL  ++++ S   L  +    PS S+SD G   FSS+AAE +V + 
Sbjct: 1   MQHVRRTGFSLKTRWLLYSNVVKSCNKLDSFLEYVPSRSLSDVGIGRFSSMAAESAVFNV 60

Query: 184 FSKR--------------------IARQVGGNSILLGAQWARQHALVHQSPFQLATSARQ 65
            +KR                    +  +  G  +L   + + Q  +  +SPFQL  +A  
Sbjct: 61  SAKRELVKSGCARRSVYSSYPAAKVIDEPAGIPVLYRNRRSTQCLMTFRSPFQLVNTAGV 120

Query: 64  NIRSSCFVRCFASNTTESNRQ 2
           N +SSCF R FAS  + S ++
Sbjct: 121 NPQSSCFARSFASKASGSRQK 141


>ref|XP_004245573.1| PREDICTED: probable mitochondrial import inner membrane translocase
           subunit TIM21-like [Solanum lycopersicum]
          Length = 311

 Score = 66.2 bits (160), Expect = 6e-09
 Identities = 46/140 (32%), Positives = 71/140 (50%), Gaps = 25/140 (17%)
 Frame = -1

Query: 346 MQHIKRSGFSMKTQWL--NSLISSYK---GLKRWPSNSVSDAGFANFSSLAAEKSVTSDF 182
           MQH++R+G S+KT+WL  N+  S  K    L+  PS S+SD G  +FSS+AAE +  +  
Sbjct: 1   MQHVRRTGISLKTRWLLSNAAKSCNKLDSFLEYVPSRSLSDVGIGHFSSMAAESAAFNVS 60

Query: 181 SKR--------------------IARQVGGNSILLGAQWARQHALVHQSPFQLATSARQN 62
           +KR                    +  +  G  +L   + + Q  +  +SPFQL  +   N
Sbjct: 61  AKRELVKSGCARRSVYAAYPAEKVIDEPAGILVLYRNRRSTQCLMTFRSPFQLVNTTGVN 120

Query: 61  IRSSCFVRCFASNTTESNRQ 2
            +SSCF R FAS  + S ++
Sbjct: 121 PQSSCFARLFASKASGSRQK 140


Top