BLASTX nr result

ID: Rehmannia22_contig00029070 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00029070
         (495 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004485990.1| PREDICTED: putative F-box/LRR-repeat protein...   118   7e-25
ref|XP_003593883.1| F-box protein SKIP19 [Medicago truncatula] g...   109   3e-22
ref|XP_006362505.1| PREDICTED: F-box protein SKIP19-like [Solanu...   108   6e-22
ref|XP_003541669.1| PREDICTED: F-box protein SKIP19-like [Glycin...   108   6e-22
ref|XP_003546075.1| PREDICTED: F-box protein SKIP19-like [Glycin...   107   1e-21
ref|XP_003593881.1| DNA-directed RNA polymerase subunit beta [Me...   107   2e-21
gb|EOX96945.1| F-box/LRR-repeat protein 23, putative isoform 1 [...   107   2e-21
ref|XP_004244536.1| PREDICTED: F-box protein SKIP19-like [Solanu...   107   2e-21
ref|XP_003593882.1| F-box protein SKIP19 [Medicago truncatula] g...   105   5e-21
ref|XP_002274093.1| PREDICTED: F-box protein SKIP19 [Vitis vinif...   105   6e-21
gb|EXB31420.1| F-box protein SKIP19 [Morus notabilis]                 104   1e-20
gb|ESW19928.1| hypothetical protein PHAVU_006G166900g [Phaseolus...   104   1e-20
gb|EMJ12703.1| hypothetical protein PRUPE_ppa007927mg [Prunus pe...   104   1e-20
gb|EXB51992.1| Putative F-box/LRR-repeat protein 23 [Morus notab...   103   2e-20
ref|XP_006352210.1| PREDICTED: putative F-box/LRR-repeat protein...   102   4e-20
ref|XP_006396594.1| hypothetical protein EUTSA_v10029411mg, part...   100   2e-19
ref|XP_004134904.1| PREDICTED: putative F-box/LRR-repeat protein...   100   3e-19
ref|XP_002526604.1| ubiquitin-protein ligase, putative [Ricinus ...   100   3e-19
ref|XP_006468267.1| PREDICTED: F-box protein SKIP19-like [Citrus...    99   4e-19
ref|XP_006448960.1| hypothetical protein CICLE_v10016034mg [Citr...    99   4e-19

>ref|XP_004485990.1| PREDICTED: putative F-box/LRR-repeat protein 23-like [Cicer
           arietinum]
          Length = 322

 Score =  118 bits (296), Expect = 7e-25
 Identities = 58/96 (60%), Positives = 72/96 (75%)
 Frame = +3

Query: 3   AIAKSMPNLCHLQLFANFMKNDGLQALLDGCPHLESLDIRQCFRVDLSGDLGKRCSQQIK 182
           AIA++MP L HLQLF N M NDGL A+LDGCPHLESLDIRQCF ++L+G LGKRC++QIK
Sbjct: 199 AIAQNMPELRHLQLFGNKMTNDGLLAILDGCPHLESLDIRQCFNINLAGTLGKRCNEQIK 258

Query: 183 NLRLPLDSVDDYRWDTGPPPYDIHSFRDFYESSSSD 290
           +LRLP D+ DDY ++     +D  S  + Y S  SD
Sbjct: 259 DLRLPYDATDDYPFEV---EFDYGSLDEDYPSGISD 291


>ref|XP_003593883.1| F-box protein SKIP19 [Medicago truncatula]
           gi|355482931|gb|AES64134.1| F-box protein SKIP19
           [Medicago truncatula]
          Length = 325

 Score =  109 bits (273), Expect = 3e-22
 Identities = 58/97 (59%), Positives = 63/97 (64%)
 Frame = +3

Query: 3   AIAKSMPNLCHLQLFANFMKNDGLQALLDGCPHLESLDIRQCFRVDLSGDLGKRCSQQIK 182
           AIAK MP L HLQL  N M NDGL ALLDGCPHLESLDIR+CF V+L G LGKRC +QIK
Sbjct: 204 AIAKYMPGLRHLQLIGNEMTNDGLVALLDGCPHLESLDIRRCFNVNLVGTLGKRCKEQIK 263

Query: 183 NLRLPLDSVDDYRWDTGPPPYDIHSFRDFYESSSSDD 293
             RLP D+ DDY + T    Y      D  ES    D
Sbjct: 264 YFRLPHDATDDYPFQTSECDYGSPVEDDADESDLMSD 300


>ref|XP_006362505.1| PREDICTED: F-box protein SKIP19-like [Solanum tuberosum]
          Length = 309

 Score =  108 bits (271), Expect = 6e-22
 Identities = 54/96 (56%), Positives = 69/96 (71%)
 Frame = +3

Query: 3   AIAKSMPNLCHLQLFANFMKNDGLQALLDGCPHLESLDIRQCFRVDLSGDLGKRCSQQIK 182
           AIA++MP L HLQL  N M N+GL+A+L+GCP LESLD+R+C  VDL G++GKRCS+QIK
Sbjct: 187 AIAQNMPELHHLQLLGNKMTNEGLEAILNGCPQLESLDLRRCLNVDLGGEVGKRCSRQIK 246

Query: 183 NLRLPLDSVDDYRWDTGPPPYDIHSFRDFYESSSSD 290
           +LR P D  +DY  DT    +D  SF + Y S  SD
Sbjct: 247 SLRHPQDPTEDYGLDT--EMHDFESFDEDYPSGFSD 280


>ref|XP_003541669.1| PREDICTED: F-box protein SKIP19-like [Glycine max]
          Length = 311

 Score =  108 bits (271), Expect = 6e-22
 Identities = 55/96 (57%), Positives = 68/96 (70%)
 Frame = +3

Query: 3   AIAKSMPNLCHLQLFANFMKNDGLQALLDGCPHLESLDIRQCFRVDLSGDLGKRCSQQIK 182
           AIA++MP L HLQLF N + N+GL A+LDGCP LESLD+RQCF V+L+G LGKRC++QIK
Sbjct: 185 AIAETMPGLHHLQLFGNKLTNEGLLAILDGCPLLESLDLRQCFNVNLAGSLGKRCAEQIK 244

Query: 183 NLRLPLDSVDDYRWDTGPPPYDIHSFRDFYESSSSD 290
            LRLP D  DDY ++      D  S  + Y S  SD
Sbjct: 245 ELRLPCDPTDDYPFEA---EIDYGSLDEDYPSGISD 277


>ref|XP_003546075.1| PREDICTED: F-box protein SKIP19-like [Glycine max]
          Length = 318

 Score =  107 bits (268), Expect = 1e-21
 Identities = 49/71 (69%), Positives = 59/71 (83%)
 Frame = +3

Query: 3   AIAKSMPNLCHLQLFANFMKNDGLQALLDGCPHLESLDIRQCFRVDLSGDLGKRCSQQIK 182
           AIA++MP L HLQLF N + N+GL A+LDGCPHLESLD+RQCF V+L+G LGKRC++QIK
Sbjct: 193 AIAETMPTLHHLQLFGNKLTNEGLLAILDGCPHLESLDLRQCFNVNLAGSLGKRCAEQIK 252

Query: 183 NLRLPLDSVDD 215
            LRLP D  DD
Sbjct: 253 ELRLPCDPTDD 263


>ref|XP_003593881.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula]
           gi|355482929|gb|AES64132.1| DNA-directed RNA polymerase
           subunit beta [Medicago truncatula]
          Length = 208

 Score =  107 bits (267), Expect = 2e-21
 Identities = 56/101 (55%), Positives = 69/101 (68%), Gaps = 5/101 (4%)
 Frame = +3

Query: 3   AIAKSMPNLCHLQLFANFMKNDGLQALLDGCPHLESLDIRQCFRVDLSGDLGKRCSQQIK 182
           +IA++MP L HLQLF N M NDGL+A+LDGCP LESLDIRQCF + L G LGK+C +QIK
Sbjct: 17  SIAETMPGLRHLQLFGNKMSNDGLRAILDGCPLLESLDIRQCFNLSLRGSLGKKCREQIK 76

Query: 183 NLRLPLDSVDDY-----RWDTGPPPYDIHSFRDFYESSSSD 290
           +LRLP D+ +DY      +D G P  D     + Y S  SD
Sbjct: 77  DLRLPYDATEDYPFQVIAYDYGSPDED-----EDYPSGISD 112


>gb|EOX96945.1| F-box/LRR-repeat protein 23, putative isoform 1 [Theobroma cacao]
           gi|508705050|gb|EOX96946.1| F-box/LRR-repeat protein 23,
           putative isoform 1 [Theobroma cacao]
          Length = 625

 Score =  107 bits (266), Expect = 2e-21
 Identities = 54/96 (56%), Positives = 68/96 (70%)
 Frame = +3

Query: 3   AIAKSMPNLCHLQLFANFMKNDGLQALLDGCPHLESLDIRQCFRVDLSGDLGKRCSQQIK 182
           AIA++MP L HLQLF N + +DGLQA+L+GCPHLESLD+RQCF V L G+L KRC +++K
Sbjct: 501 AIAQTMPELHHLQLFGNKLTDDGLQAILNGCPHLESLDLRQCFNVSLVGNLEKRCVERMK 560

Query: 183 NLRLPLDSVDDYRWDTGPPPYDIHSFRDFYESSSSD 290
           NLR P DS  DY +D     +D  S  + Y S  SD
Sbjct: 561 NLRRPYDSTHDYEFDA--EVHDTGSSDEDYPSGISD 594



 Score = 99.4 bits (246), Expect = 4e-19
 Identities = 47/77 (61%), Positives = 59/77 (76%)
 Frame = +3

Query: 3   AIAKSMPNLCHLQLFANFMKNDGLQALLDGCPHLESLDIRQCFRVDLSGDLGKRCSQQIK 182
           AIA++M  L HLQL  N + N GLQA+LDGCP+LESLD+R+C+ V+L  DLGKRC++QIK
Sbjct: 209 AIAQNMRGLHHLQLLGNKLTNHGLQAILDGCPYLESLDLRRCYFVNLDKDLGKRCAEQIK 268

Query: 183 NLRLPLDSVDDYRWDTG 233
           NLR P DS  DY +  G
Sbjct: 269 NLRHPSDSTHDYEFTPG 285


>ref|XP_004244536.1| PREDICTED: F-box protein SKIP19-like [Solanum lycopersicum]
          Length = 311

 Score =  107 bits (266), Expect = 2e-21
 Identities = 54/96 (56%), Positives = 67/96 (69%)
 Frame = +3

Query: 3   AIAKSMPNLCHLQLFANFMKNDGLQALLDGCPHLESLDIRQCFRVDLSGDLGKRCSQQIK 182
           AIA++MP L HLQL  N M N+GL+A+L+GCP LESLD+R+C  V L G+LGKRCS QIK
Sbjct: 187 AIAQNMPELRHLQLLGNKMTNEGLEAILNGCPRLESLDLRRCLNVQLEGELGKRCSSQIK 246

Query: 183 NLRLPLDSVDDYRWDTGPPPYDIHSFRDFYESSSSD 290
           +LR P D  +DY  DT    +D  SF + Y S  SD
Sbjct: 247 SLRHPEDPTEDYGLDT--EMHDFESFDEDYPSGFSD 280


>ref|XP_003593882.1| F-box protein SKIP19 [Medicago truncatula]
           gi|355482930|gb|AES64133.1| F-box protein SKIP19
           [Medicago truncatula]
          Length = 332

 Score =  105 bits (263), Expect = 5e-21
 Identities = 49/72 (68%), Positives = 56/72 (77%)
 Frame = +3

Query: 3   AIAKSMPNLCHLQLFANFMKNDGLQALLDGCPHLESLDIRQCFRVDLSGDLGKRCSQQIK 182
           +IAK+MP L HL L  N M  DGL+A+LDGCPHLESLDIRQCF + L G LGKRC +QIK
Sbjct: 197 SIAKTMPGLRHLMLVGNKMSKDGLRAILDGCPHLESLDIRQCFNLSLRGSLGKRCREQIK 256

Query: 183 NLRLPLDSVDDY 218
            LRLP D+ DDY
Sbjct: 257 YLRLPYDATDDY 268


>ref|XP_002274093.1| PREDICTED: F-box protein SKIP19 [Vitis vinifera]
           gi|147853333|emb|CAN82327.1| hypothetical protein
           VITISV_041807 [Vitis vinifera]
           gi|297740788|emb|CBI30970.3| unnamed protein product
           [Vitis vinifera]
          Length = 321

 Score =  105 bits (262), Expect = 6e-21
 Identities = 55/96 (57%), Positives = 68/96 (70%)
 Frame = +3

Query: 3   AIAKSMPNLCHLQLFANFMKNDGLQALLDGCPHLESLDIRQCFRVDLSGDLGKRCSQQIK 182
           AIA++MP L  LQLF N + N+GL A+LDGC HLESLD+RQCF V+L G+L KRC++QIK
Sbjct: 192 AIAQNMPGLKSLQLFGNKLTNNGLLAILDGCCHLESLDLRQCFNVNLGGNLAKRCAEQIK 251

Query: 183 NLRLPLDSVDDYRWDTGPPPYDIHSFRDFYESSSSD 290
            LR P DS DDY +D     +D  SF + Y S  SD
Sbjct: 252 ILRYPNDSTDDYEFDA--EIHDDASFDEEYPSGISD 285


>gb|EXB31420.1| F-box protein SKIP19 [Morus notabilis]
          Length = 351

 Score =  104 bits (260), Expect = 1e-20
 Identities = 51/96 (53%), Positives = 65/96 (67%)
 Frame = +3

Query: 6   IAKSMPNLCHLQLFANFMKNDGLQALLDGCPHLESLDIRQCFRVDLSGDLGKRCSQQIKN 185
           IAK +P L HLQL  N M N GLQA+LDGCPHLESLD+R+C  +DL G LG+RC +QIK 
Sbjct: 210 IAKHIPELRHLQLLGNPMTNMGLQAILDGCPHLESLDLRRCLSIDLKGKLGQRCKEQIKY 269

Query: 186 LRLPLDSVDDYRWDTGPPPYDIHSFRDFYESSSSDD 293
           LRLP +S +D  +  GP     ++  DF +  S D+
Sbjct: 270 LRLPHESTEDLEFRIGPDDDGHNAPNDFSDDGSFDE 305


>gb|ESW19928.1| hypothetical protein PHAVU_006G166900g [Phaseolus vulgaris]
          Length = 307

 Score =  104 bits (260), Expect = 1e-20
 Identities = 47/75 (62%), Positives = 60/75 (80%)
 Frame = +3

Query: 3   AIAKSMPNLCHLQLFANFMKNDGLQALLDGCPHLESLDIRQCFRVDLSGDLGKRCSQQIK 182
           AIAK+MP L HLQLF N + NDGL A+LDGCPHLESLD+RQCF V L G L KRC++QIK
Sbjct: 188 AIAKTMPGLRHLQLFGNNLTNDGLLAILDGCPHLESLDLRQCFHVKLGGSLSKRCAEQIK 247

Query: 183 NLRLPLDSVDDYRWD 227
           +LR+P +  ++Y ++
Sbjct: 248 DLRIPYNLTEEYPFE 262


>gb|EMJ12703.1| hypothetical protein PRUPE_ppa007927mg [Prunus persica]
          Length = 351

 Score =  104 bits (259), Expect = 1e-20
 Identities = 49/85 (57%), Positives = 62/85 (72%)
 Frame = +3

Query: 3   AIAKSMPNLCHLQLFANFMKNDGLQALLDGCPHLESLDIRQCFRVDLSGDLGKRCSQQIK 182
           AIA +M  L HLQLF N + NDGL+ +LD CPHLESLD+R CF +DL G L KRC+++IK
Sbjct: 229 AIAGTMNGLHHLQLFGNRLTNDGLRKILDCCPHLESLDLRHCFNLDLKGALEKRCAERIK 288

Query: 183 NLRLPLDSVDDYRWDTGPPPYDIHS 257
            LRLP DS+DDY + T P  Y  ++
Sbjct: 289 QLRLPNDSIDDYEFCTAPCDYGFYN 313


>gb|EXB51992.1| Putative F-box/LRR-repeat protein 23 [Morus notabilis]
          Length = 281

 Score =  103 bits (258), Expect = 2e-20
 Identities = 47/73 (64%), Positives = 58/73 (79%)
 Frame = +3

Query: 6   IAKSMPNLCHLQLFANFMKNDGLQALLDGCPHLESLDIRQCFRVDLSGDLGKRCSQQIKN 185
           IAK MP + HLQ+  N M N GLQA+LDGCPHLESLD+RQCF +DL G LG+RC++QIK 
Sbjct: 203 IAKHMPEIRHLQILGNSMTNMGLQAILDGCPHLESLDLRQCFSLDLEGKLGERCTEQIKY 262

Query: 186 LRLPLDSVDDYRW 224
           LRLP +S DD+ +
Sbjct: 263 LRLPHESTDDFEF 275


>ref|XP_006352210.1| PREDICTED: putative F-box/LRR-repeat protein 23-like [Solanum
           tuberosum]
          Length = 306

 Score =  102 bits (255), Expect = 4e-20
 Identities = 53/96 (55%), Positives = 65/96 (67%)
 Frame = +3

Query: 3   AIAKSMPNLCHLQLFANFMKNDGLQALLDGCPHLESLDIRQCFRVDLSGDLGKRCSQQIK 182
           AIA+ MP L HL L  N + N+GLQA+LDGCPHLESLD+R C  +DL GDLG+RCSQQI 
Sbjct: 197 AIARCMPGLRHLALIENNLTNEGLQAILDGCPHLESLDLRCCCFIDLEGDLGRRCSQQIV 256

Query: 183 NLRLPLDSVDDYRWDTGPPPYDIHSFRDFYESSSSD 290
           +L+ P DS  DY +D     Y   SF D+  S  S+
Sbjct: 257 DLKQPRDSTCDYEFDCKIRHY--RSFEDYCRSRFSN 290


>ref|XP_006396594.1| hypothetical protein EUTSA_v10029411mg, partial [Eutrema
           salsugineum] gi|557097611|gb|ESQ38047.1| hypothetical
           protein EUTSA_v10029411mg, partial [Eutrema salsugineum]
          Length = 207

 Score =  100 bits (249), Expect = 2e-19
 Identities = 48/97 (49%), Positives = 65/97 (67%)
 Frame = +3

Query: 3   AIAKSMPNLCHLQLFANFMKNDGLQALLDGCPHLESLDIRQCFRVDLSGDLGKRCSQQIK 182
           AIA++MP L HLQLF N + N GL A+LD CP+LE LD+RQCF+VDL GDL +R S++ K
Sbjct: 77  AIAETMPGLHHLQLFGNRLSNTGLNAILDNCPNLEHLDLRQCFKVDLDGDLERRLSERTK 136

Query: 183 NLRLPLDSVDDYRWDTGPPPYDIHSFRDFYESSSSDD 293
            +R P DS  DY +D     +D   + D+ + S  +D
Sbjct: 137 VVRRPHDSTHDYPYDATMYSWDYDDYSDYEDYSDYED 173


>ref|XP_004134904.1| PREDICTED: putative F-box/LRR-repeat protein 23-like [Cucumis
           sativus] gi|449490717|ref|XP_004158686.1| PREDICTED:
           putative F-box/LRR-repeat protein 23-like [Cucumis
           sativus]
          Length = 318

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 48/102 (47%), Positives = 68/102 (66%), Gaps = 5/102 (4%)
 Frame = +3

Query: 3   AIAKSMPNLCHLQLFANFMKNDGLQALLDGCPHLESLDIRQCFRVDLSGDLGKRCSQQIK 182
           AIAK+MP L HLQ+F N + + GLQA+L+GCP LESLD+R CF +   G+LG  C++ IK
Sbjct: 178 AIAKTMPKLRHLQIFGNALTDKGLQAILNGCPDLESLDLRHCFNLKFEGELGNMCAENIK 237

Query: 183 NLRLPLDSVDDYRWDTGPPPYDIHSFRDF-----YESSSSDD 293
            L LP DS DDY ++T    +D   F D+     ++++ SD+
Sbjct: 238 ILHLPHDSTDDYEFNTDIIDWDGDDFEDYSYDLLHDNNDSDN 279


>ref|XP_002526604.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223534044|gb|EEF35763.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 305

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 50/96 (52%), Positives = 65/96 (67%)
 Frame = +3

Query: 3   AIAKSMPNLCHLQLFANFMKNDGLQALLDGCPHLESLDIRQCFRVDLSGDLGKRCSQQIK 182
           AI + MP+L +LQ+F N + NDG+QA+LDGCPHLE LD+RQCF V L G+LG  C ++IK
Sbjct: 191 AIGQWMPHLRYLQIFGNKLTNDGVQAILDGCPHLEFLDLRQCFNVHLEGELGMLCGERIK 250

Query: 183 NLRLPLDSVDDYRWDTGPPPYDIHSFRDFYESSSSD 290
           +LR P D  DDY ++   P Y   S  + Y S  SD
Sbjct: 251 DLRRPDDPTDDYPFNPEIPDYG--SSEEDYPSGFSD 284


>ref|XP_006468267.1| PREDICTED: F-box protein SKIP19-like [Citrus sinensis]
          Length = 309

 Score = 99.4 bits (246), Expect = 4e-19
 Identities = 52/96 (54%), Positives = 65/96 (67%)
 Frame = +3

Query: 3   AIAKSMPNLCHLQLFANFMKNDGLQALLDGCPHLESLDIRQCFRVDLSGDLGKRCSQQIK 182
           AIA++M  L HLQLF N + N GLQA+LDGCPHLESLD+RQCF V+L G LGK C+++I+
Sbjct: 185 AIAENMHGLRHLQLFGNELTNVGLQAILDGCPHLESLDLRQCFNVNLVGKLGKICAERIR 244

Query: 183 NLRLPLDSVDDYRWDTGPPPYDIHSFRDFYESSSSD 290
           +LR P DS  DY +           F+DF  SS  D
Sbjct: 245 DLRHPNDSTHDYEFGA--------DFQDFCWSSVED 272


>ref|XP_006448960.1| hypothetical protein CICLE_v10016034mg [Citrus clementina]
           gi|557551571|gb|ESR62200.1| hypothetical protein
           CICLE_v10016034mg [Citrus clementina]
          Length = 223

 Score = 99.4 bits (246), Expect = 4e-19
 Identities = 52/96 (54%), Positives = 65/96 (67%)
 Frame = +3

Query: 3   AIAKSMPNLCHLQLFANFMKNDGLQALLDGCPHLESLDIRQCFRVDLSGDLGKRCSQQIK 182
           AIA++M  L HLQLF N + N GLQA+LDGCPHLESLD+RQCF V+L G LGK C+++I+
Sbjct: 99  AIAENMHGLRHLQLFGNELTNVGLQAILDGCPHLESLDLRQCFNVNLVGKLGKICAERIR 158

Query: 183 NLRLPLDSVDDYRWDTGPPPYDIHSFRDFYESSSSD 290
           +LR P DS  DY +           F+DF  SS  D
Sbjct: 159 DLRHPNDSTHDYEFGA--------DFQDFCWSSVED 186


Top