BLASTX nr result
ID: Rehmannia22_contig00028550
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00028550
(758 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY02333.1| DNA-repair protein UVH3, putative isoform 1 [Theo... 74 7e-11
emb|CBI34953.3| unnamed protein product [Vitis vinifera] 73 1e-10
ref|XP_002275112.1| PREDICTED: DNA repair protein UVH3-like [Vit... 73 1e-10
ref|XP_004233336.1| PREDICTED: DNA repair protein UVH3-like [Sol... 70 1e-09
ref|XP_006470383.1| PREDICTED: DNA repair protein UVH3-like isof... 67 7e-09
ref|XP_006470382.1| PREDICTED: DNA repair protein UVH3-like isof... 67 7e-09
ref|XP_006470381.1| PREDICTED: DNA repair protein UVH3-like isof... 67 7e-09
ref|XP_006446452.1| hypothetical protein CICLE_v10014025mg [Citr... 67 9e-09
ref|NP_566830.1| DNA repair protein UVH3 [Arabidopsis thaliana] ... 62 3e-07
dbj|BAB01125.1| unnamed protein product [Arabidopsis thaliana] 60 6e-07
>gb|EOY02333.1| DNA-repair protein UVH3, putative isoform 1 [Theobroma cacao]
Length = 1670
Score = 73.6 bits (179), Expect = 7e-11
Identities = 63/226 (27%), Positives = 94/226 (41%), Gaps = 14/226 (6%)
Frame = +3
Query: 3 RSGRPRKVVNYNVSDELDNSDKETENRLEECSVAKESFVDQAVNGINKSDANELN---EG 173
RS R R VNYNV+D D + N+ C A E +N N S+A + +
Sbjct: 1456 RSMRTRNPVNYNVNDLED--EVGLSNKESSCEEAMEQEAADDLNEENPSEARDPTFEEDF 1513
Query: 174 SGDLGIGGNNFVEESEETYRMDKTSASPLDDSRMDDEPFNQTELSKDYLQFGGGFCADED 353
S D G F + +E D++ +P + E SKDYL+ GGGFC DE+
Sbjct: 1514 SRDYLERGGGFCMDEKEVGHPDESQGV---------DPTPEAEASKDYLKMGGGFCIDEN 1564
Query: 354 EETEINEHASSPTTETVPDKSDDCNFADPMVEENPESDPSIVITQRPTD----------- 500
E ++ + A D S+ F D + ++PS +R D
Sbjct: 1565 ETSKDPDAACDQDPVAATDSSNGVAFTDKADDNAASAEPS-SSPKRSLDGLQNASFTELN 1623
Query: 501 LGGDELKMNDETRSDYHLLDDTENDSGNCYPNSLRSMPNLIRKRKK 638
LG D+++ + T ND+ + L +MP L RKR+K
Sbjct: 1624 LGHQNAANEDDSKGSAPPQETTVNDTVTAFVGGLSAMPTLKRKRRK 1669
>emb|CBI34953.3| unnamed protein product [Vitis vinifera]
Length = 1449
Score = 72.8 bits (177), Expect = 1e-10
Identities = 63/230 (27%), Positives = 103/230 (44%), Gaps = 19/230 (8%)
Frame = +3
Query: 3 RSGRPRKVVNYNVSD-ELDNSDKETENRLEECS----VAKESFVDQAVNGINKSDANELN 167
RS RPRK VNY D E+D+ K + ++C+ V E DQ + G +D + N
Sbjct: 1226 RSKRPRKAVNYANDDLEIDDEGKSLDQGNQKCTNEEAVELEPSRDQIICGDAAADFSGKN 1285
Query: 168 EGSGDLGIGGNNFV---EESEETYRMDKTSASPLDDSRMDDEPFNQTELSKDYLQFGGGF 338
+ + G + E+E MD+ LD DD+P E S+DYL+ GGGF
Sbjct: 1286 QQKAEDSSPGEDLCGDYPETEGVMCMDENEIGQLDSR--DDDPTFADEFSEDYLKMGGGF 1343
Query: 339 CADEDEETEINEHASSPTTETVPDKSDDCNFADPMVEENPESDPSIVITQRPTDLGGDEL 518
C +EDE+ + +H T D + +P E P+ ++ GG +
Sbjct: 1344 CVEEDEKDK--DH----NARTYDPAKADTIYENPDPESELAIHPAESVSSLQNTAGGFQS 1397
Query: 519 KMNDETRSDYHL-----------LDDTENDSGNCYPNSLRSMPNLIRKRK 635
+ + ++ +L ++T +D+G +LR+MP L +KR+
Sbjct: 1398 EPTCQPDTELNLDCPNATIGLSMPENTGDDTGTNTVKALRAMPFLRKKRR 1447
>ref|XP_002275112.1| PREDICTED: DNA repair protein UVH3-like [Vitis vinifera]
Length = 1513
Score = 72.8 bits (177), Expect = 1e-10
Identities = 63/230 (27%), Positives = 103/230 (44%), Gaps = 19/230 (8%)
Frame = +3
Query: 3 RSGRPRKVVNYNVSD-ELDNSDKETENRLEECS----VAKESFVDQAVNGINKSDANELN 167
RS RPRK VNY D E+D+ K + ++C+ V E DQ + G +D + N
Sbjct: 1290 RSKRPRKAVNYANDDLEIDDEGKSLDQGNQKCTNEEAVELEPSRDQIICGDAAADFSGKN 1349
Query: 168 EGSGDLGIGGNNFV---EESEETYRMDKTSASPLDDSRMDDEPFNQTELSKDYLQFGGGF 338
+ + G + E+E MD+ LD DD+P E S+DYL+ GGGF
Sbjct: 1350 QQKAEDSSPGEDLCGDYPETEGVMCMDENEIGQLDSR--DDDPTFADEFSEDYLKMGGGF 1407
Query: 339 CADEDEETEINEHASSPTTETVPDKSDDCNFADPMVEENPESDPSIVITQRPTDLGGDEL 518
C +EDE+ + +H T D + +P E P+ ++ GG +
Sbjct: 1408 CVEEDEKDK--DH----NARTYDPAKADTIYENPDPESELAIHPAESVSSLQNTAGGFQS 1461
Query: 519 KMNDETRSDYHL-----------LDDTENDSGNCYPNSLRSMPNLIRKRK 635
+ + ++ +L ++T +D+G +LR+MP L +KR+
Sbjct: 1462 EPTCQPDTELNLDCPNATIGLSMPENTGDDTGTNTVKALRAMPFLRKKRR 1511
>ref|XP_004233336.1| PREDICTED: DNA repair protein UVH3-like [Solanum lycopersicum]
Length = 1539
Score = 69.7 bits (169), Expect = 1e-09
Identities = 78/233 (33%), Positives = 114/233 (48%), Gaps = 20/233 (8%)
Frame = +3
Query: 3 RSGRPRKVVNYNVSDELDNSDKETENRLEECSVAKESFVDQAVNGINKSDANELNEG--S 176
RS R RK+VNY+ + D SDK+ + E +E+ VD V +D++++NE S
Sbjct: 1315 RSQRHRKIVNYSEKRD-DESDKDDGDSTAEKLERREAGVDVDVAERYPADSSKMNENDAS 1373
Query: 177 GDLGIGGNNFVEESEETYRMDKTSASPLDDSRMDDEPFNQTELSKDYLQFGGGFCADE-- 350
D +E + M+ T A P+ D D P + LSK+YL+ GGGFC +E
Sbjct: 1374 NDYCPQELPNLETNAGGAEMEST-AQPIFDETYDPIPGDL--LSKEYLKMGGGFCLEEND 1430
Query: 351 -DEETEINEHASSPTTETVPDKSDDCNFADPMVEENPE-------SDPSIVITQRPTD-- 500
D E EIN ASSP + SD N + + +EN S PS +++ +
Sbjct: 1431 GDMEHEIN--ASSPILSV--EGSDIYNSSQLLGDENNGNASNQLISSPSRKTSEKQCEAG 1486
Query: 501 LGGDELKMNDETRSDYHLLD---DTENDSGNCYPNS---LRSMPNLIRKRKKN 641
+G E++ + ++ D EN N Y +S LR+MPNL RKRKKN
Sbjct: 1487 IGASEIEQDLHNTTNITCNDVSPHLENMGKNDYVSSSVFLRAMPNL-RKRKKN 1538
>ref|XP_006470383.1| PREDICTED: DNA repair protein UVH3-like isoform X3 [Citrus sinensis]
Length = 1485
Score = 67.0 bits (162), Expect = 7e-09
Identities = 65/231 (28%), Positives = 99/231 (42%), Gaps = 18/231 (7%)
Frame = +3
Query: 3 RSGRPRKVVNYNVSD-ELDN-----SDKETENRLEECSVAKESFVDQAVNGINKSDANEL 164
RS R RK V+YNV D E+ + S+KE+ N E + +A ++ +
Sbjct: 1268 RSTRSRKPVDYNVDDPEIADVGKILSNKESSNEEEAKQDSVHGVTGEASADYSRKKQHRA 1327
Query: 165 NEGSGD---LGIGGNNFVEESEETYRMDKTSASPLDDSRMDDEPFNQTELSKDYLQFGGG 335
++ S D + GG +++ E + + S SP DD PF + E++KDY++ GGG
Sbjct: 1328 DDPSIDKDYIERGGGFCIDDRE----IGRPSVSPCDD------PFLEAEITKDYMKMGGG 1377
Query: 336 FCADEDEETEINEHASSP-----TTETVPDKSD----DCNFADPMVEENPESDPSIVITQ 488
FC DE E E A P + T D SD D D N + + +
Sbjct: 1378 FCHDESETREDQVAAKDPVVTGESPSTCLDSSDGVHCDVGLGDSTTSSNSKEATNGLENV 1437
Query: 489 RPTDLGGDELKMNDETRSDYHLLDDTENDSGNCYPNSLRSMPNLIRKRKKN 641
TD E + + D ND+G SL +M L RKR+++
Sbjct: 1438 GRTDTFDTEPNPVVQNATS---TDSARNDAGRASRGSLTAMTFLRRKRRRS 1485
>ref|XP_006470382.1| PREDICTED: DNA repair protein UVH3-like isoform X2 [Citrus sinensis]
Length = 1531
Score = 67.0 bits (162), Expect = 7e-09
Identities = 65/231 (28%), Positives = 99/231 (42%), Gaps = 18/231 (7%)
Frame = +3
Query: 3 RSGRPRKVVNYNVSD-ELDN-----SDKETENRLEECSVAKESFVDQAVNGINKSDANEL 164
RS R RK V+YNV D E+ + S+KE+ N E + +A ++ +
Sbjct: 1314 RSTRSRKPVDYNVDDPEIADVGKILSNKESSNEEEAKQDSVHGVTGEASADYSRKKQHRA 1373
Query: 165 NEGSGD---LGIGGNNFVEESEETYRMDKTSASPLDDSRMDDEPFNQTELSKDYLQFGGG 335
++ S D + GG +++ E + + S SP DD PF + E++KDY++ GGG
Sbjct: 1374 DDPSIDKDYIERGGGFCIDDRE----IGRPSVSPCDD------PFLEAEITKDYMKMGGG 1423
Query: 336 FCADEDEETEINEHASSP-----TTETVPDKSD----DCNFADPMVEENPESDPSIVITQ 488
FC DE E E A P + T D SD D D N + + +
Sbjct: 1424 FCHDESETREDQVAAKDPVVTGESPSTCLDSSDGVHCDVGLGDSTTSSNSKEATNGLENV 1483
Query: 489 RPTDLGGDELKMNDETRSDYHLLDDTENDSGNCYPNSLRSMPNLIRKRKKN 641
TD E + + D ND+G SL +M L RKR+++
Sbjct: 1484 GRTDTFDTEPNPVVQNATS---TDSARNDAGRASRGSLTAMTFLRRKRRRS 1531
>ref|XP_006470381.1| PREDICTED: DNA repair protein UVH3-like isoform X1 [Citrus sinensis]
Length = 1699
Score = 67.0 bits (162), Expect = 7e-09
Identities = 65/231 (28%), Positives = 99/231 (42%), Gaps = 18/231 (7%)
Frame = +3
Query: 3 RSGRPRKVVNYNVSD-ELDN-----SDKETENRLEECSVAKESFVDQAVNGINKSDANEL 164
RS R RK V+YNV D E+ + S+KE+ N E + +A ++ +
Sbjct: 1482 RSTRSRKPVDYNVDDPEIADVGKILSNKESSNEEEAKQDSVHGVTGEASADYSRKKQHRA 1541
Query: 165 NEGSGD---LGIGGNNFVEESEETYRMDKTSASPLDDSRMDDEPFNQTELSKDYLQFGGG 335
++ S D + GG +++ E + + S SP DD PF + E++KDY++ GGG
Sbjct: 1542 DDPSIDKDYIERGGGFCIDDRE----IGRPSVSPCDD------PFLEAEITKDYMKMGGG 1591
Query: 336 FCADEDEETEINEHASSP-----TTETVPDKSD----DCNFADPMVEENPESDPSIVITQ 488
FC DE E E A P + T D SD D D N + + +
Sbjct: 1592 FCHDESETREDQVAAKDPVVTGESPSTCLDSSDGVHCDVGLGDSTTSSNSKEATNGLENV 1651
Query: 489 RPTDLGGDELKMNDETRSDYHLLDDTENDSGNCYPNSLRSMPNLIRKRKKN 641
TD E + + D ND+G SL +M L RKR+++
Sbjct: 1652 GRTDTFDTEPNPVVQNATS---TDSARNDAGRASRGSLTAMTFLRRKRRRS 1699
>ref|XP_006446452.1| hypothetical protein CICLE_v10014025mg [Citrus clementina]
gi|557549063|gb|ESR59692.1| hypothetical protein
CICLE_v10014025mg [Citrus clementina]
Length = 1699
Score = 66.6 bits (161), Expect = 9e-09
Identities = 65/231 (28%), Positives = 99/231 (42%), Gaps = 18/231 (7%)
Frame = +3
Query: 3 RSGRPRKVVNYNVSD-ELDN-----SDKETENRLEECSVAKESFVDQAVNGINKSDANEL 164
RS R RK V+YNV D E+ + S+KE+ N E + +A ++ +
Sbjct: 1482 RSTRSRKPVDYNVDDPEIADVGKILSNKESSNEEEAKQDSVHGVTGEASADYSRKKQHRA 1541
Query: 165 NEGSGD---LGIGGNNFVEESEETYRMDKTSASPLDDSRMDDEPFNQTELSKDYLQFGGG 335
++ S D + GG +++ E + + S SP DD PF + E++KDY++ GGG
Sbjct: 1542 DDPSIDKDYIERGGGFCIDDQE----IGQPSVSPCDD------PFLEAEITKDYMKMGGG 1591
Query: 336 FCADEDEETEINEHASSP-----TTETVPDKSD----DCNFADPMVEENPESDPSIVITQ 488
FC DE E E A P + T D SD D D N + + +
Sbjct: 1592 FCHDESETREDQVAAKDPVVTGESPSTCFDSSDGVHCDVGLGDSTTSSNSKEATNGLENV 1651
Query: 489 RPTDLGGDELKMNDETRSDYHLLDDTENDSGNCYPNSLRSMPNLIRKRKKN 641
TD E + + D ND+G SL +M L RKR+++
Sbjct: 1652 GRTDTFDTEPNPVVQNATS---TDSARNDAGRASRGSLTAMTFLRRKRRRS 1699
>ref|NP_566830.1| DNA repair protein UVH3 [Arabidopsis thaliana]
gi|56749787|sp|Q9ATY5.1|UVH3_ARATH RecName: Full=DNA
repair protein UVH3; AltName: Full=ERCC5 homolog;
AltName: Full=RAD2 homolog; Short=AtRAD2; Short=AtUVH3;
Short=AtXPG; AltName: Full=UV hypersensitive protein 3;
AltName: Full=XPG homolog gi|13649704|gb|AAK37472.1| UV
hypersensitive protein [Arabidopsis thaliana]
gi|332643872|gb|AEE77393.1| DNA repair protein UVH3
[Arabidopsis thaliana]
Length = 1479
Score = 61.6 bits (148), Expect = 3e-07
Identities = 56/200 (28%), Positives = 85/200 (42%)
Frame = +3
Query: 42 SDELDNSDKETENRLEECSVAKESFVDQAVNGINKSDANELNEGSGDLGIGGNNFVEESE 221
SD+ D+ DK E + ++ K + V K D +EL+E + G NF E E
Sbjct: 1295 SDDDDDDDKVVELEAKPANLQKSTRSRNPVMYSAKED-DELDESRSNEGSPSENFEEVDE 1353
Query: 222 ETYRMDKTSASPLDDSRMDDEPFNQTELSKDYLQFGGGFCADEDEETEINEHASSPTTET 401
D + D+ ++D P S+DY+Q GGGFCADE +E T +
Sbjct: 1354 GRIGNDDSV-----DASINDCP------SEDYIQTGGGFCADEADEIGDAHLEDKATDDY 1402
Query: 402 VPDKSDDCNFADPMVEENPESDPSIVITQRPTDLGGDELKMNDETRSDYHLLDDTENDSG 581
C D EEN D + ++ + + N+E D L ++ + G
Sbjct: 1403 RVIGGGFCVDEDETAEENTMDDDAEILKMESEEQRKKGKRRNEE---DASLDENVDIHFG 1459
Query: 582 NCYPNSLRSMPNLIRKRKKN 641
N L +MP L RK++KN
Sbjct: 1460 NSSAGGLSAMPFLKRKKRKN 1479
>dbj|BAB01125.1| unnamed protein product [Arabidopsis thaliana]
Length = 1522
Score = 60.5 bits (145), Expect = 6e-07
Identities = 55/202 (27%), Positives = 87/202 (43%), Gaps = 2/202 (0%)
Frame = +3
Query: 42 SDELDNSDKETENRLEECSVAKESFVDQAVNGINKS--DANELNEGSGDLGIGGNNFVEE 215
SD+ D+ DK E + ++ K ++ N + S + +EL+E + G NF E
Sbjct: 1335 SDDDDDDDKVVELEAKPANLQKVRKSTRSRNPVMYSAKEDDELDESRSNEGSPSENFEEV 1394
Query: 216 SEETYRMDKTSASPLDDSRMDDEPFNQTELSKDYLQFGGGFCADEDEETEINEHASSPTT 395
E D + D+ ++D P S+DY+Q GGGFCADE +E T
Sbjct: 1395 DEGRIGNDDSV-----DASINDCP------SEDYIQTGGGFCADEADEIGDAHLEDKATD 1443
Query: 396 ETVPDKSDDCNFADPMVEENPESDPSIVITQRPTDLGGDELKMNDETRSDYHLLDDTEND 575
+ C D EEN D + ++ + + N+E D L ++ +
Sbjct: 1444 DYRVIGGGFCVDEDETAEENTMDDDAEILKMESEEQRKKGKRRNEE---DASLDENVDIH 1500
Query: 576 SGNCYPNSLRSMPNLIRKRKKN 641
GN L +MP L RK++KN
Sbjct: 1501 FGNSSAGGLSAMPFLKRKKRKN 1522