BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00028531
         (759 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66959.1| hypothetical protein VITISV_013138 [Vitis vinifera]   123   3e-37
emb|CAN66873.1| hypothetical protein VITISV_021427 [Vitis vinifera]   122   2e-36
ref|XP_002263348.2| PREDICTED: wall-associated receptor kinase 2...   120   4e-36
emb|CAN78666.1| hypothetical protein VITISV_032507 [Vitis vinifera]   121   5e-36
emb|CAN69855.1| hypothetical protein VITISV_041230 [Vitis vinifera]   108   9e-33
ref|XP_003635668.1| PREDICTED: uncharacterized protein LOC100854...   107   2e-31
emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]   106   3e-31
ref|XP_003631792.1| PREDICTED: uncharacterized protein LOC100252...   105   5e-31
emb|CAX68207.1| Copia-like retrotransposon [Helianthus annuus]        116   8e-31
emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]   106   8e-31
gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi]          110   3e-30
gb|AAP94586.1| putative retrotransposon RIRE1 poly protein [Zea ...   103   5e-30
gb|EXB75595.1| Retrovirus-related Pol polyprotein from transposo...   112   2e-29
emb|CAN69713.1| hypothetical protein VITISV_011261 [Vitis vinifera]    89   2e-27
ref|XP_004233808.1| PREDICTED: uncharacterized protein LOC101263...    89   3e-26
gb|AAM95676.1| putative polyprotein [Oryza sativa Japonica Group]      91   6e-26
gb|AAP54390.2| retrotransposon protein, putative, Ty1-copia subc...    91   1e-25
gb|ABA97124.1| retrotransposon protein, putative, Ty1-copia subc...    91   1e-25
gb|AAG13538.1|AC023240_11 putative gag-pol polyprotein [Oryza sa...    91   1e-25
gb|ABA98084.1| retrotransposon protein, putative, Ty1-copia subc...    91   1e-25

>emb|CAN66959.1| hypothetical protein VITISV_013138 [Vitis vinifera]
          Length = 1234

 Score =  123 bits (308), Expect(2) = 3e-37
 Identities = 79/209 (37%), Positives = 103/209 (49%), Gaps = 13/209 (6%)
 Frame = -3

Query: 757 FKLDDSSSLMDQIHNLQVIVSKLKDYGVEISESMQVGAIIAKLPSSWNDYQKKLFHTSEI 578
           FK  D   L+ QIH LQVIV+KLK   +E+ E+ QVGAI+AKLPSSW  Y+K++ H SE 
Sbjct: 127 FKFFDEKPLLPQIHELQVIVNKLKVLKIELPEAFQVGAIVAKLPSSWKGYRKRILHKSED 186

Query: 577 LTISSVLKHLRIEEGARILHKKEFDSDPRVNMVH--------EKKFKNKRKNSEN----- 437
            ++  + KHLRIEE +R   K   +S+   N  +          K  N +KNS N     
Sbjct: 187 YSLEEIQKHLRIEEESRSRDKMVEESNGGTNKANAISKANHPRGKNNNNKKNSGNYMSPK 246

Query: 436 ADSEDKKKKNRVCYNCGKKGHYKAECXXXXXXXXXXXXXXXXNLVEDATEIIAMLSLGTV 257
            + E  K K   C+ CGK GHY  EC                       EIIA LS   V
Sbjct: 247 KNQEQFKGKKGXCFVCGKPGHYARECRFRKDQKGAVVNAID-------EEIIATLSDVCV 299

Query: 256 TELHLATPTSSKDWWYDSGAAIHVCNDKN 170
            +         + WWYD+ A +HV  DK+
Sbjct: 300 VQ------GKVQGWWYDTCATVHVTYDKS 322



 Score = 59.3 bits (142), Expect(2) = 3e-37
 Identities = 31/56 (55%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
 Frame = -2

Query: 167 FKNYEILDG-QQVVMANGVRAKVLGRGDVHLDLTSGKKMVLTNVLHVPDVVKNLVS 3
           FK +E   G Q+V M N  ++KVLG+G + +  TSGKK+ LTNVL+VPD+ KNLVS
Sbjct: 324 FKTFEDAKGBQEVQMGNEGKSKVLGKGTIEVVFTSGKKVTLTNVLYVPDMNKNLVS 379


>emb|CAN66873.1| hypothetical protein VITISV_021427 [Vitis vinifera]
          Length = 1473

 Score =  122 bits (307), Expect(2) = 2e-36
 Identities = 79/209 (37%), Positives = 103/209 (49%), Gaps = 13/209 (6%)
 Frame = -3

Query: 757 FKLDDSSSLMDQIHNLQVIVSKLKDYGVEISESMQVGAIIAKLPSSWNDYQKKLFHTSEI 578
           FK  D   L+ QIH LQVIV+KLK   +E+ E+ QVGAI+AKLPSSW  Y+K++ H SE 
Sbjct: 127 FKFFDEKPLLPQIHELQVIVNKLKVLKIELPEAFQVGAIVAKLPSSWKGYRKRILHKSED 186

Query: 577 LTISSVLKHLRIEEGARILHKKEFDSDPRVNMVH--------EKKFKNKRKNSEN----- 437
            ++  + KHLRIEE +R   K   +S+   N  +          K  N +KNS N     
Sbjct: 187 YSLEEIQKHLRIEEESRSRDKMVEESNGGTNKANAISKANHPRGKNNNNKKNSGNYMSPK 246

Query: 436 ADSEDKKKKNRVCYNCGKKGHYKAECXXXXXXXXXXXXXXXXNLVEDATEIIAMLSLGTV 257
            + E  K K   C+ CGK GHY  EC                       EIIA LS   V
Sbjct: 247 KNQEQFKGKKGPCFVCGKPGHYARECRFRKDQKGAVVNAID-------EEIIATLSDVCV 299

Query: 256 TELHLATPTSSKDWWYDSGAAIHVCNDKN 170
            +         + WWYD+ A +HV  DK+
Sbjct: 300 VQ------GKVQGWWYDTCATVHVTYDKS 322



 Score = 57.0 bits (136), Expect(2) = 2e-36
 Identities = 30/56 (53%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
 Frame = -2

Query: 167 FKNYEILDG-QQVVMANGVRAKVLGRGDVHLDLTSGKKMVLTNVLHVPDVVKNLVS 3
           FK +E   G Q+V M N  ++KVLG+G + +  TSGKK+ L NVL+VPD+ KNLVS
Sbjct: 324 FKTFEDAKGDQEVQMGNEGKSKVLGKGTIEVVFTSGKKVTLKNVLYVPDMNKNLVS 379


>ref|XP_002263348.2| PREDICTED: wall-associated receptor kinase 2-like [Vitis vinifera]
          Length = 1182

 Score =  120 bits (301), Expect(2) = 4e-36
 Identities = 78/209 (37%), Positives = 102/209 (48%), Gaps = 13/209 (6%)
 Frame = -3

Query: 757 FKLDDSSSLMDQIHNLQVIVSKLKDYGVEISESMQVGAIIAKLPSSWNDYQKKLFHTSEI 578
           FK  D   L+ QIH LQVIV+KLK   +E+ E+ QVGAI+AKLPSSW  Y+K++ H SE 
Sbjct: 119 FKFFDEKPLLPQIHELQVIVNKLKVLKIELPEAFQVGAIVAKLPSSWKGYRKRILHKSED 178

Query: 577 LTISSVLKHLRIEEGARILHKKEFDSDPRVNMVH--------EKKFKNKRKNSEN----- 437
            ++  + KHLRIEE  R   K   +S+   N  +          K  N ++NS N     
Sbjct: 179 YSLEEIQKHLRIEEELRSRDKMAEESNGGTNKANAVSKANHPRGKNNNDKRNSGNYMSPK 238

Query: 436 ADSEDKKKKNRVCYNCGKKGHYKAECXXXXXXXXXXXXXXXXNLVEDATEIIAMLSLGTV 257
            + E  K K   C+ CGK GHY  EC                       EIIA LS   V
Sbjct: 239 KNQEQFKGKKGPCFVCGKLGHYARECRYRKDLKGVVVNAID-------EEIIATLSDVCV 291

Query: 256 TELHLATPTSSKDWWYDSGAAIHVCNDKN 170
            +         + WWYD+ A +HV  DK+
Sbjct: 292 VQ------GKVQGWWYDTCATVHVTYDKS 314



 Score = 58.2 bits (139), Expect(2) = 4e-36
 Identities = 31/56 (55%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
 Frame = -2

Query: 167 FKNYEILDG-QQVVMANGVRAKVLGRGDVHLDLTSGKKMVLTNVLHVPDVVKNLVS 3
           FK +E   G Q+V M N  R+KVLG+G + +  TSGKK+ L NVL+VPD+ KNLVS
Sbjct: 316 FKTFEDAKGDQEVQMGNEGRSKVLGKGTIEVVFTSGKKVTLINVLYVPDMNKNLVS 371


>emb|CAN78666.1| hypothetical protein VITISV_032507 [Vitis vinifera]
          Length = 804

 Score =  121 bits (303), Expect(2) = 5e-36
 Identities = 78/209 (37%), Positives = 103/209 (49%), Gaps = 13/209 (6%)
 Frame = -3

Query: 757 FKLDDSSSLMDQIHNLQVIVSKLKDYGVEISESMQVGAIIAKLPSSWNDYQKKLFHTSEI 578
           FK  D   L+ QIH LQVIV+KLK   +E+ E+ QVGAI+AKLPSSW  Y+K++ H SE 
Sbjct: 127 FKFFDEKPLLPQIHELQVIVNKLKVLKIELPEAFQVGAIVAKLPSSWKGYRKRILHKSED 186

Query: 577 LTISSVLKHLRIEEGARILHKKEFDSDPRVNMVH--------EKKFKNKRKNSEN----- 437
            ++  + KHLRI+E +R   K   +S+   N  +          K  N +KNS N     
Sbjct: 187 YSLEEIQKHLRIKEESRSRDKMVEESNGGTNKANAISKANHPRGKNNNNKKNSGNYMSPK 246

Query: 436 ADSEDKKKKNRVCYNCGKKGHYKAECXXXXXXXXXXXXXXXXNLVEDATEIIAMLSLGTV 257
            + E  K K   C+ CGK GHY  EC                       EIIA LS   V
Sbjct: 247 KNQEQFKGKKGPCFVCGKPGHYARECRFRKDQKGVVVNAID-------EEIIATLSDVCV 299

Query: 256 TELHLATPTSSKDWWYDSGAAIHVCNDKN 170
            +         + WWYD+ A +HV  DK+
Sbjct: 300 VQ------GKVQGWWYDTCATVHVTYDKS 322



 Score = 57.0 bits (136), Expect(2) = 5e-36
 Identities = 30/56 (53%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
 Frame = -2

Query: 167 FKNYEILDG-QQVVMANGVRAKVLGRGDVHLDLTSGKKMVLTNVLHVPDVVKNLVS 3
           FK +E   G Q+V M N  ++KVLG+G + +  TSGKK+ L NVL+VPD+ KNLVS
Sbjct: 324 FKTFEDAKGDQEVQMGNEGKSKVLGKGTIEVVFTSGKKVTLKNVLYVPDMNKNLVS 379


>emb|CAN69855.1| hypothetical protein VITISV_041230 [Vitis vinifera]
          Length = 1236

 Score =  108 bits (271), Expect(2) = 9e-33
 Identities = 74/204 (36%), Positives = 96/204 (47%), Gaps = 13/204 (6%)
 Frame = -3

Query: 757 FKLDDSSSLMDQIHNLQVIVSKLKDYGVEISESMQVGAIIAKLPSSWNDYQKKLFHTSEI 578
           FK  D   L+ QIH LQVIV+KLK   +E+  + QVGAI+AKLPSSW  Y+K++ H SE 
Sbjct: 79  FKCFDEKPLLPQIHELQVIVNKLKVLKIELXXAFQVGAIVAKLPSSWKGYRKRIXHKSED 138

Query: 577 LTISSVLKHLRIEEGARILHKKEFDSDPRVNMVH--------EKKFKNKRKNSEN----- 437
            ++  + KHL IEE +R   K   +S+   N  +          K  N + NS N     
Sbjct: 139 YSLEEIQKHLXIEEESRSRDKMVEESNXGTNKANAVSKXNHPRXKNNNDKXNSGNYMSPK 198

Query: 436 ADSEDKKKKNRVCYNCGKKGHYKAECXXXXXXXXXXXXXXXXNLVEDATEIIAMLSLGTV 257
            + E  K K   C+ CGK  HY  EC                       EIIA LS   V
Sbjct: 199 KNQEQFKGKKGPCFVCGKPEHYVRECRYRKDQKGAVVNAID-------EEIIATLSDVCV 251

Query: 256 TELHLATPTSSKDWWYDSGAAIHV 185
            +         + WWYD+ A IHV
Sbjct: 252 VQ------GKVQGWWYDTCATIHV 269



 Score = 58.5 bits (140), Expect(2) = 9e-33
 Identities = 31/56 (55%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
 Frame = -2

Query: 167 FKNYEILDG-QQVVMANGVRAKVLGRGDVHLDLTSGKKMVLTNVLHVPDVVKNLVS 3
           FK +E   G Q+V M N  R+KVLG+G + +  TSGKK+ L NVL+VPD+ KNLVS
Sbjct: 276 FKTFEDAKGDQEVQMGNEGRSKVLGKGTIEVAFTSGKKVTLINVLYVPDMNKNLVS 331


>ref|XP_003635668.1| PREDICTED: uncharacterized protein LOC100854178, partial [Vitis
           vinifera]
          Length = 478

 Score =  107 bits (266), Expect(2) = 2e-31
 Identities = 63/206 (30%), Positives = 103/206 (50%), Gaps = 11/206 (5%)
 Frame = -3

Query: 757 FKLDDSSSLMDQIHNLQVIVSKLKDYGVEISESMQVGAIIAKLPSSWNDYQKKLFHTSEI 578
           +K+ DS +++ Q+  LQVI+ ++   G+ +SE+ QV AII KLP +W D++  L H  + 
Sbjct: 150 YKMVDSKTVVSQVQELQVILHEIHAEGMMLSETFQVAAIIEKLPPAWKDFKNYLKHKRKE 209

Query: 577 LTISSVLKHLRIEEGARILHKKEFD--SDPRVNMVHEKKFKNKRKNSENADS-------- 428
           ++I  ++  LRIEE  R   KK     ++ + N V   +  N + N+             
Sbjct: 210 MSIEDLIIRLRIEEDNRRSEKKGAHTLNEAKANFVEHGQSSNAKTNNNKGKGSKLGPKGG 269

Query: 427 -EDKKKKNRVCYNCGKKGHYKAECXXXXXXXXXXXXXXXXNLVEDATEIIAMLSLGTVTE 251
              K K    C+NCGK+GH   +C                N+++D T+ +  + L TV  
Sbjct: 270 ISKKPKFQGKCFNCGKQGHKSVDC-----RLPKKNKPKEANVIDDITKNVYDIDLTTVVS 324

Query: 250 LHLATPTSSKDWWYDSGAAIHVCNDK 173
                 ++ K+WW D+GA  HVC+DK
Sbjct: 325 EVNLVGSNPKEWWIDTGATRHVCSDK 350



 Score = 55.8 bits (133), Expect(2) = 2e-31
 Identities = 27/59 (45%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
 Frame = -2

Query: 176 QEQFKNYE-ILDGQQVVMANGVRAKVLGRGDVHLDLTSGKKMVLTNVLHVPDVVKNLVS 3
           ++ F  +E I +G++V M N   +++ G+G V L +TSGK++ LTNVL+VP++ KNLVS
Sbjct: 350 KKMFSTFEPIENGEKVFMGNSATSEIKGQGKVILKMTSGKELTLTNVLYVPEIRKNLVS 408


>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
          Length = 1316

 Score =  106 bits (264), Expect(2) = 3e-31
 Identities = 65/206 (31%), Positives = 106/206 (51%), Gaps = 11/206 (5%)
 Frame = -3

Query: 757 FKLDDSSSLMDQIHNLQVIVSKLKDYGVEISESMQVGAIIAKLPSSWNDYQKKLFHTSEI 578
           +K+ DS +++ Q+  LQVI+ ++   G+ +SE+ QV AII KLP +W D++  L H  + 
Sbjct: 150 YKMVDSKTVVSQVQELQVILHEIHAEGMMLSETFQVAAIIEKLPPAWKDFKNYLKHKRKE 209

Query: 577 LTISSVLKHLRIEEGARILHKKEFD--SDPRVNMV-HEKKFKNKRKNSENADSE------ 425
           ++I  ++  LRIEE  R   KK     ++ + N V H +  K K  N++   S+      
Sbjct: 210 MSIEDLIIRLRIEEDNRRSEKKGAHTLNEAKANFVEHGQSSKAKTNNNKGKGSKLGPKGG 269

Query: 424 --DKKKKNRVCYNCGKKGHYKAECXXXXXXXXXXXXXXXXNLVEDATEIIAMLSLGTVTE 251
              K K    C+NCGK+GH   +C                N+++D T+ +  + L  V  
Sbjct: 270 ISKKPKFQGKCFNCGKQGHKSVDC-----RLPKKNKPKEANVIDDITKNVYDIDLTAVVS 324

Query: 250 LHLATPTSSKDWWYDSGAAIHVCNDK 173
                 ++ K+WW D+GA  HVC+DK
Sbjct: 325 EVNLVGSNPKEWWIDTGATRHVCSDK 350



 Score = 55.8 bits (133), Expect(2) = 3e-31
 Identities = 27/59 (45%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
 Frame = -2

Query: 176 QEQFKNYE-ILDGQQVVMANGVRAKVLGRGDVHLDLTSGKKMVLTNVLHVPDVVKNLVS 3
           ++ F  +E I +G++V M N   +++ G+G V L +TSGK++ LTNVL+VP++ KNLVS
Sbjct: 350 KKMFSTFEPIENGEKVFMGNSATSEIKGQGKVILKMTSGKELTLTNVLYVPEIRKNLVS 408


>ref|XP_003631792.1| PREDICTED: uncharacterized protein LOC100252656 [Vitis vinifera]
          Length = 946

 Score =  105 bits (263), Expect(2) = 5e-31
 Identities = 64/206 (31%), Positives = 107/206 (51%), Gaps = 11/206 (5%)
 Frame = -3

Query: 757 FKLDDSSSLMDQIHNLQVIVSKLKDYGVEISESMQVGAIIAKLPSSWNDYQKKLFHTSEI 578
           +K+ DS +++ Q+  LQVI+ ++   G+ +SE+ QV AII KLP +W D++  L H  + 
Sbjct: 150 YKMVDSKTVVSQVQELQVILHEIHAEGMMLSETFQVAAIIEKLPPAWKDFKNCLKHKRKE 209

Query: 577 LTISSVLKHLRIEEGARILHKKEFD--SDPRVNMV-HEKKFKNKRKNSENADSE------ 425
           ++I  ++  LRIEE  R   KK     ++ + N V H +  K K  N++   S+      
Sbjct: 210 MSIEDLIIRLRIEEDNRRSEKKGVHTLNEAKANFVEHGQSSKAKTNNNKGKGSKLGPKGG 269

Query: 424 --DKKKKNRVCYNCGKKGHYKAECXXXXXXXXXXXXXXXXNLVEDATEIIAMLSLGTVTE 251
              K K    C+NCGK+GH   +C                N++++ T+ ++ + L  V  
Sbjct: 270 ISKKPKFQGKCFNCGKQGHKSVDC-----RLPKKNKPKEANVIDNITKNVSNIDLTAVVS 324

Query: 250 LHLATPTSSKDWWYDSGAAIHVCNDK 173
                 ++ K+WW D+GA  HVC+DK
Sbjct: 325 EVNLVGSNPKEWWIDTGATRHVCSDK 350



 Score = 55.8 bits (133), Expect(2) = 5e-31
 Identities = 27/59 (45%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
 Frame = -2

Query: 176 QEQFKNYE-ILDGQQVVMANGVRAKVLGRGDVHLDLTSGKKMVLTNVLHVPDVVKNLVS 3
           ++ F  +E I +G++V M N   +++ G+G V L +TSGK++ LTNVL+VP++ KNLVS
Sbjct: 350 KKMFSTFEPIENGEKVFMGNSTTSEIKGQGKVILKMTSGKELTLTNVLYVPEIRKNLVS 408


>emb|CAX68207.1| Copia-like retrotransposon [Helianthus annuus]
          Length = 1358

 Score =  116 bits (291), Expect(2) = 8e-31
 Identities = 72/215 (33%), Positives = 108/215 (50%), Gaps = 18/215 (8%)
 Frame = -3

Query: 757 FKLDDSSSLMDQIHNLQVIVSKLKDYGVEISESMQVGAIIAKLPSSWNDYQKKLFHTSEI 578
           F++ D  S+++Q+H LQV+V+KL    + + E  QVG IIAKLP  W D+ K++ H SE 
Sbjct: 124 FQMVDDKSILEQVHELQVLVNKLTALSIPLPEIFQVGVIIAKLPPGWKDFSKRMMHKSED 183

Query: 577 LTISSVLKHLRIEEGARILHKKEFDSDPRVNMV-------------HEKKF----KNKRK 449
            ++  +LKHLRIEE  R   K+       VN V               KKF    K + K
Sbjct: 184 YSLDELLKHLRIEEETRNRDKRG-KVGSSVNHVAGGSGQKGKGASSRNKKFTAPKKKEFK 242

Query: 448 NSENADSEDKKKKNRVCYNCGKKGHYKAECXXXXXXXXXXXXXXXXNLVEDATEIIAMLS 269
            S++ ++   K+  + C+ CG+ GHY  EC                  VE  T ++A + 
Sbjct: 243 KSQHTNNHQPKRSGK-CHVCGETGHYARECSQRKSGSTVGSTSAID--VEKVTNLVANVG 299

Query: 268 LGTVTELHLATP-TSSKDWWYDSGAAIHVCNDKNN 167
           LG V  L   T   + + W+ DSGA +HVC ++ +
Sbjct: 300 LGEVNMLSQYTRIVACRGWFLDSGATVHVCGNRGS 334



 Score = 44.3 bits (103), Expect(2) = 8e-31
 Identities = 22/47 (46%), Positives = 30/47 (63%)
 Frame = -2

Query: 143 GQQVVMANGVRAKVLGRGDVHLDLTSGKKMVLTNVLHVPDVVKNLVS 3
           G  VV A+G R +V G+G V L+   G+ + L +VLHVP + K LVS
Sbjct: 344 GTVVVCADGHRVEVRGKGTVRLNFRDGQVVTLQDVLHVPGITKGLVS 390


>emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]
          Length = 1277

 Score =  106 bits (265), Expect(2) = 8e-31
 Identities = 65/206 (31%), Positives = 108/206 (52%), Gaps = 11/206 (5%)
 Frame = -3

Query: 757 FKLDDSSSLMDQIHNLQVIVSKLKDYGVEISESMQVGAIIAKLPSSWNDYQKKLFHTSEI 578
           +K+ DS +++ Q+  LQVI+ ++   G+ +SE+ QV AII KLP +W D++  L H  + 
Sbjct: 150 YKMVDSKTVVSQVQELQVILHEIHADGMMLSETFQVAAIIEKLPPAWKDFKNYLKHKRKE 209

Query: 577 LTISSVLKHLRIEEGARILHKKEFD--SDPRVNMV-HEKKFKNKRKNSENADSE------ 425
           ++I  ++  LRIEE  R   KK     ++ + N V H +  K K  N++   S+      
Sbjct: 210 MSIEDLIIRLRIEEDNRRSEKKGAHTLNEAQANFVEHGQSSKAKTNNNKGKGSKLGPKGG 269

Query: 424 --DKKKKNRVCYNCGKKGHYKAECXXXXXXXXXXXXXXXXNLVEDATEIIAMLSLGTVTE 251
              K K    C+NCGK+GH   +C                N++++ T+ ++ + L TV  
Sbjct: 270 ISKKPKFQGKCFNCGKQGHKSVDC-----RLPKKNKPKEANVIDNITKNVSDIDLTTVVS 324

Query: 250 LHLATPTSSKDWWYDSGAAIHVCNDK 173
                 ++ K+WW D+GA  HVC+DK
Sbjct: 325 EVNLVGSNPKEWWIDTGATRHVCSDK 350



 Score = 54.3 bits (129), Expect(2) = 8e-31
 Identities = 26/58 (44%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
 Frame = -2

Query: 176 QEQFKNYE-ILDGQQVVMANGVRAKVLGRGDVHLDLTSGKKMVLTNVLHVPDVVKNLV 6
           ++ F  +E I +G++V M N   +++ G+G V L +TSGK++ LTNVL+VP++ KNLV
Sbjct: 350 KKMFSTFEPIENGEKVFMGNSTTSEIKGQGKVILKMTSGKELTLTNVLYVPEIRKNLV 407


>gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi]
          Length = 701

 Score =  110 bits (276), Expect(2) = 3e-30
 Identities = 64/196 (32%), Positives = 104/196 (53%), Gaps = 1/196 (0%)
 Frame = -3

Query: 757 FKLDDSSSLMDQIHNLQVIVSKLKDYGVEISESMQVGAIIAKLPSSWNDYQKKLFHTSEI 578
           FK+ DS +++ Q+  LQ+I+S++   G+ +SE+ QV AII KLP +W D++  L H  + 
Sbjct: 151 FKMVDSKTVISQVQELQIILSEILAEGMHLSETFQVAAIIEKLPPAWKDFKSYLKHKQKE 210

Query: 577 LTISSVLKHLRIEEGARILHKKEFDSDPRVNMV-HEKKFKNKRKNSENADSEDKKKKNRV 401
           + I  ++  LRIEE  R   +    S  + N V H  K K K+   +   S+ + K    
Sbjct: 211 MNIEGLVVKLRIEEDNRNAERIGAISMAKANFVEHGPKKKKKKLGPKGGISKKQTKFQGK 270

Query: 400 CYNCGKKGHYKAECXXXXXXXXXXXXXXXXNLVEDATEIIAMLSLGTVTELHLATPTSSK 221
           CYNC K GH  ++C                N+VE+ T+ ++ ++L  V        ++ +
Sbjct: 271 CYNCDKMGHKASDC-------RLPKKKREANVVENITQHVSDINLSAVVLEVNMVGSNPR 323

Query: 220 DWWYDSGAAIHVCNDK 173
           +WW D+GA  HVC+DK
Sbjct: 324 EWWIDTGATRHVCSDK 339



 Score = 48.1 bits (113), Expect(2) = 3e-30
 Identities = 21/46 (45%), Positives = 34/46 (73%)
 Frame = -2

Query: 140 QQVVMANGVRAKVLGRGDVHLDLTSGKKMVLTNVLHVPDVVKNLVS 3
           +++ M N   +++ G+G V L +TSGK++ L NVL+VP++ KNLVS
Sbjct: 352 EKLFMGNSATSEIEGQGKVALKMTSGKELTLNNVLYVPEIRKNLVS 397


>gb|AAP94586.1| putative retrotransposon RIRE1 poly protein [Zea mays]
          Length = 1309

 Score =  103 bits (258), Expect(2) = 5e-30
 Identities = 60/203 (29%), Positives = 98/203 (48%), Gaps = 7/203 (3%)
 Frame = -3

Query: 757 FKLDDSSSLMDQIHNLQVIVSKLKDYGVEISESMQVGAIIAKLPSSWNDYQKKLFHTSEI 578
           +K+ +  S+M+Q+  +Q++V  L  YG  + +S QV AI+AKLP SW D+     H  + 
Sbjct: 140 YKMVEGRSVMEQLQEIQLLVRDLVQYGCVLPDSFQVNAILAKLPPSWRDFVTSRRHMKKQ 199

Query: 577 LTISSVLKHLRIEEGARILHKKEFDSDPR-VNMVHEKKFKNKRKNS------ENADSEDK 419
           +T++ +   + +EE AR  +K         V    ++KF+ K+KNS      +    + K
Sbjct: 200 MTLTELSAAINVEERARSSNKPSQQLQAHVVEKGGDRKFQKKKKNSPQKNLNQPKSKKMK 259

Query: 418 KKKNRVCYNCGKKGHYKAECXXXXXXXXXXXXXXXXNLVEDATEIIAMLSLGTVTELHLA 239
           KK++ +CY CG  GH    C                 +V            G   +  +A
Sbjct: 260 KKEDFICYVCGVSGHTARRCKLRKGKGPPPQRKEGNVVVNSTP--------GYALQAFMA 311

Query: 238 TPTSSKDWWYDSGAAIHVCNDKN 170
           +P  S DWW DSGA +H+C D++
Sbjct: 312 SP--SDDWWMDSGATVHICADRS 332



 Score = 54.3 bits (129), Expect(2) = 5e-30
 Identities = 26/58 (44%), Positives = 39/58 (67%)
 Frame = -2

Query: 176 QEQFKNYEILDGQQVVMANGVRAKVLGRGDVHLDLTSGKKMVLTNVLHVPDVVKNLVS 3
           +  F +++  +   V+M NGV A V G G V+L LTSGK +VL +VL+VP + +NL+S
Sbjct: 331 RSMFSSFQGFNSAPVLMGNGVPAAVRGTGQVYLKLTSGKTLVLKDVLYVPSMSRNLIS 388


>gb|EXB75595.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Morus
           notabilis]
          Length = 440

 Score =  112 bits (279), Expect(2) = 2e-29
 Identities = 63/168 (37%), Positives = 92/168 (54%), Gaps = 6/168 (3%)
 Frame = -3

Query: 658 MQVGAIIAKLPSSWNDYQKKLFHTSEILTISSVLKHLRIEEGARILHKKEFDSD-PRVNM 482
           +++GAIIAKLP SWN Y+KKL H  + +T+  + KHLRI+E  +    K  + D  +VN+
Sbjct: 13  LRLGAIIAKLPQSWNGYRKKLLHRRDDITLEELQKHLRIKEDTKFRDSKSKNVDSSKVNV 72

Query: 481 VHEKKF-KNKRKNSE---NADSEDKKKKNRVCYNCGKKGHYKAEC-XXXXXXXXXXXXXX 317
               KF KN + N++         +KK +  C+ CGKKGH++ +C               
Sbjct: 73  AEASKFSKNFKVNNDKKFKKPGNGQKKFSENCFFCGKKGHHQNDCRYKKKKEVNTNNANA 132

Query: 316 XXNLVEDATEIIAMLSLGTVTELHLATPTSSKDWWYDSGAAIHVCNDK 173
                ED   +++ L +G +TE ++A   SS DWW DS   IHVCNDK
Sbjct: 133 VEEKSEDICAMVSELQIGMITETNMAASKSS-DWWLDSSVTIHVCNDK 179



 Score = 43.9 bits (102), Expect(2) = 2e-29
 Identities = 26/56 (46%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
 Frame = -2

Query: 167 FKNYEI-LDGQQVVMANGVRAKVLGRGDVHLDLTSGKKMVLTNVLHVPDVVKNLVS 3
           F +Y++  +GQ V+M +   A V GRG V ++ TS KK+ L N   VPD+ KNLVS
Sbjct: 182 FLSYKVEKEGQTVLMRSNDAAMVAGRGVVEINFTSEKKLTLNN---VPDIRKNLVS 234


>emb|CAN69713.1| hypothetical protein VITISV_011261 [Vitis vinifera]
          Length = 382

 Score = 88.6 bits (218), Expect(2) = 2e-27
 Identities = 58/201 (28%), Positives = 96/201 (47%), Gaps = 5/201 (2%)
 Frame = -3

Query: 757 FKLDDSSSLMDQIHNLQVIVSKLKDYGVEISESMQVGAIIAKLPSSWNDYQKKLFHTSEI 578
           +K+ DS ++  Q+  LQ+I+ +L    +E+SES QV AI+ KL  SW D++  L H  + 
Sbjct: 131 YKMVDSKTVTSQVQELQIILHELHAEKMELSESFQVAAIVEKLLPSWKDFKNYLKHKRKE 190

Query: 577 LTISSVLKHLRIEEGARILHKK--EFDSDPRVNMVHEKKFKNKRKNSENADSEDKKKKNR 404
           + +  ++  L+ EE   +  KK  +   + + N+V E K   KRK+   + S+ K K  +
Sbjct: 191 MGLEDLIXXLKXEEDNCVSEKKVGKHPMESKANLV-EPKANKKRKHFGESLSQGKNKYKK 249

Query: 403 V---CYNCGKKGHYKAECXXXXXXXXXXXXXXXXNLVEDATEIIAMLSLGTVTELHLATP 233
               CY C K+GH    C                  V +  E+  MLS   + E+++   
Sbjct: 250 FLGKCYICNKQGHRAKXCRLKGQSKENKAH------VTEEEELANMLSALVLFEVNMVDN 303

Query: 232 TSSKDWWYDSGAAIHVCNDKN 170
            +   WW   G   HVC ++N
Sbjct: 304 VNK--WWVGMGVTRHVCRERN 322



 Score = 60.8 bits (146), Expect(2) = 2e-27
 Identities = 27/56 (48%), Positives = 40/56 (71%)
 Frame = -2

Query: 176 QEQFKNYEILDGQQVVMANGVRAKVLGRGDVHLDLTSGKKMVLTNVLHVPDVVKNL 9
           +  F  Y  ++G+ ++M N   +KV+G G V L +TSGK++VLTNVLHVPD+ +NL
Sbjct: 321 RNMFSTYVPVNGRNLIMGNSATSKVVGIGKVVLKMTSGKELVLTNVLHVPDICRNL 376


>ref|XP_004233808.1| PREDICTED: uncharacterized protein LOC101263787 [Solanum
            lycopersicum]
          Length = 2703

 Score = 89.4 bits (220), Expect(2) = 3e-26
 Identities = 56/185 (30%), Positives = 85/185 (45%), Gaps = 8/185 (4%)
 Frame = -3

Query: 697  SKLKDYGVEISESMQVGAIIAKLPSSWNDYQKKLFHTSEILTISSVLKHLRIEEGARILH 518
            +K+   G+ + E+  VGAI++KLP SW +Y+ KL H  E LT+  +L+HL+IE+  R   
Sbjct: 890  NKIVITGIALDENFHVGAIVSKLPPSWKEYRSKLLHKKEDLTLEQLLQHLQIEQETRYRD 949

Query: 517  KKEFDSDPRVNMVHEKKFKN--------KRKNSENADSEDKKKKNRVCYNCGKKGHYKAE 362
                        V E+K K         K K S+N    +   K+  CY+C K GHY  +
Sbjct: 950  NNILREPIMKAHVVEEKIKKEPANNKFLKAKKSKNFKRTNSNSKSIKCYHCHKIGHYARD 1009

Query: 361  CXXXXXXXXXXXXXXXXNLVEDATEIIAMLSLGTVTELHLATPTSSKDWWYDSGAAIHVC 182
            C                       E++AM     VTE  +A      +WW D+GA  H+ 
Sbjct: 1010 CKILKAEKKKEKANN-----NTKNELVAM-----VTEAFVA--GDQVEWWIDTGATRHIS 1057

Query: 181  NDKNN 167
             ++N+
Sbjct: 1058 GNRNS 1062



 Score = 56.2 bits (134), Expect(2) = 3e-26
 Identities = 29/59 (49%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
 Frame = -2

Query: 176  QEQFKNYEILDGQQVV-MANGVRAKVLGRGDVHLDLTSGKKMVLTNVLHVPDVVKNLVS 3
            +  F  YE++ G +V+ M N   AKV+G+G V L  TS K + L +VLHVPD+ KNLVS
Sbjct: 1060 RNSFTTYELVGGDKVLHMGNSSSAKVVGKGTVELKFTSEKMVTLIDVLHVPDIRKNLVS 1118


>gb|AAM95676.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1138

 Score = 91.3 bits (225), Expect(2) = 6e-26
 Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 19/213 (8%)
 Frame = -3

Query: 757 FKLDDSSSLMDQIHNLQVIVSKLKDYGVEISESMQVGAIIAKLPSSWNDYQKKLFHTSEI 578
           +K+ D  S+++Q H +Q++  +L++   E+ +    G IIAKLP SW+D+   L H  + 
Sbjct: 82  YKMVDDRSVVEQAHEIQMLAKELENNNCELPDKFVAGGIIAKLPPSWSDFATSLKHNRQE 141

Query: 577 LTISSVLKHLRIEEGARI--LHKKEFDSDPRVNMVHEKK----FKNKR-------KNSEN 437
            ++  ++  L +EE AR   +  K+ +     NMV +K       NK+       K + N
Sbjct: 142 FSVPDLIGSLGVEEKARAKDVQGKKVEGGSSANMVQKKNPHASHNNKKVKPDVKPKAATN 201

Query: 436 ADSEDKKKKNRVCYNCGKKGHYKAECXXXXXXXXXXXXXXXXNLVEDATEIIAMLSLGTV 257
              + K K    C+ CGK GH+  +C                   +D      ++S G  
Sbjct: 202 FKKKSKGKAKGDCFVCGKSGHWAKDCPER----------------KDRKSANMIISEGGG 245

Query: 256 TELH---LATPTS---SKDWWYDSGAAIHVCND 176
           T  +   L T  S   S DWW D+GA IHVC D
Sbjct: 246 TSGYGKILPTVLSVFHSPDWWVDTGANIHVCAD 278



 Score = 53.1 bits (126), Expect(2) = 6e-26
 Identities = 27/55 (49%), Positives = 34/55 (61%)
 Frame = -2

Query: 167 FKNYEILDGQQVVMANGVRAKVLGRGDVHLDLTSGKKMVLTNVLHVPDVVKNLVS 3
           F +Y++  G  ++M NG  A V G G V L  TSGK + L NV HVP + KNLVS
Sbjct: 282 FSSYQVRRGSSLLMGNGSLAAVHGVGTVDLKFTSGKTVQLKNVQHVPSIKKNLVS 336


>gb|AAP54390.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1479

 Score = 90.9 bits (224), Expect(2) = 1e-25
 Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 19/213 (8%)
 Frame = -3

Query: 757 FKLDDSSSLMDQIHNLQVIVSKLKDYGVEISESMQVGAIIAKLPSSWNDYQKKLFHTSEI 578
           +K+ D  S+++Q H +Q++  +L++   E+ +    G IIAKLP SW+D+   L H  + 
Sbjct: 293 YKMVDDRSVVEQAHEIQMLAKELENNNCELPDKFVAGGIIAKLPPSWSDFATSLKHKRQE 352

Query: 577 LTISSVLKHLRIEEGARI--LHKKEFDSDPRVNMVHEKK----FKNKR-------KNSEN 437
            ++  ++  L +EE AR   +  K+ +     NMV +K       NK+       K + N
Sbjct: 353 FSVPDLIGSLGVEEKARAKDVRGKKVEGGSSANMVQKKNPHASHNNKKVKPDVKPKAATN 412

Query: 436 ADSEDKKKKNRVCYNCGKKGHYKAECXXXXXXXXXXXXXXXXNLVEDATEIIAMLSLGTV 257
              + K K    C+ CGK GH+  +C                   +D      ++S G  
Sbjct: 413 FKKKSKGKAKGDCFVCGKSGHWAKDCPER----------------KDRKSANMIISEGGG 456

Query: 256 TELH---LATPTS---SKDWWYDSGAAIHVCND 176
           T  +   L T  S   S DWW D+GA IHVC D
Sbjct: 457 TSGYGKILPTVLSVFHSPDWWVDTGANIHVCAD 489



 Score = 52.4 bits (124), Expect(2) = 1e-25
 Identities = 27/55 (49%), Positives = 34/55 (61%)
 Frame = -2

Query: 167 FKNYEILDGQQVVMANGVRAKVLGRGDVHLDLTSGKKMVLTNVLHVPDVVKNLVS 3
           F +Y++  G  ++M NG  A V G G V L  TSGK + L NV HVP + KNLVS
Sbjct: 493 FSSYQVGRGSSLLMGNGSLAAVHGVGTVDLKFTSGKTVQLKNVQHVPSIKKNLVS 547


>gb|ABA97124.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1453

 Score = 90.5 bits (223), Expect(2) = 1e-25
 Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 19/213 (8%)
 Frame = -3

Query: 757 FKLDDSSSLMDQIHNLQVIVSKLKDYGVEISESMQVGAIIAKLPSSWNDYQKKLFHTSEI 578
           +K+ D  S+++Q H +Q++  +L++   E+ +    G IIAKLP SW+D+   L H  + 
Sbjct: 267 YKMVDDRSVVEQAHEIQMLAKELENNNCELPDKFVAGGIIAKLPPSWSDFATSLKHKRQE 326

Query: 577 LTISSVLKHLRIEEGARI--LHKKEFDSDPRVNMVHEKK----FKNKR-------KNSEN 437
            ++  ++  L +EE AR   +  K+ +     NMV +K       NK+       K + N
Sbjct: 327 FSVPDLIGSLGVEEKARAKDVRGKKVEGGSSANMVQKKNPHASHNNKKVKPDVKPKAATN 386

Query: 436 ADSEDKKKKNRVCYNCGKKGHYKAECXXXXXXXXXXXXXXXXNLVEDATEIIAMLSLGTV 257
              + K K    C+ CGK GH+  +C                   +D      ++S G  
Sbjct: 387 FKKKGKGKAKGDCFVCGKSGHWAKDCPER----------------KDRKSANMIISEGGG 430

Query: 256 TELH---LATPTS---SKDWWYDSGAAIHVCND 176
           T  +   L T  S   S DWW D+GA IHVC D
Sbjct: 431 TSGYGKILPTVLSVFHSPDWWVDTGANIHVCAD 463



 Score = 52.8 bits (125), Expect(2) = 1e-25
 Identities = 27/55 (49%), Positives = 34/55 (61%)
 Frame = -2

Query: 167 FKNYEILDGQQVVMANGVRAKVLGRGDVHLDLTSGKKMVLTNVLHVPDVVKNLVS 3
           F +Y++  G  ++M NG  A V G G V L  TSGK + L NV HVP + KNLVS
Sbjct: 467 FSSYQVERGSSLLMGNGSLAAVHGVGTVDLKFTSGKTVQLKNVQHVPSIKKNLVS 521


>gb|AAG13538.1|AC023240_11 putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 1408

 Score = 90.9 bits (224), Expect(2) = 1e-25
 Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 19/213 (8%)
 Frame = -3

Query: 757 FKLDDSSSLMDQIHNLQVIVSKLKDYGVEISESMQVGAIIAKLPSSWNDYQKKLFHTSEI 578
           +K+ D  S+++Q H +Q++  +L++   E+ +    G IIAKLP SW+D+   L H  + 
Sbjct: 222 YKMVDDRSVVEQAHEIQMLAKELENNNCELPDKFVAGGIIAKLPPSWSDFATSLKHKRQE 281

Query: 577 LTISSVLKHLRIEEGARI--LHKKEFDSDPRVNMVHEKK----FKNKR-------KNSEN 437
            ++  ++  L +EE AR   +  K+ +     NMV +K       NK+       K + N
Sbjct: 282 FSVPDLIGSLGVEEKARAKDVRGKKVEGGSSANMVQKKNPHASHNNKKVKPDVKPKAATN 341

Query: 436 ADSEDKKKKNRVCYNCGKKGHYKAECXXXXXXXXXXXXXXXXNLVEDATEIIAMLSLGTV 257
              + K K    C+ CGK GH+  +C                   +D      ++S G  
Sbjct: 342 FKKKSKGKAKGDCFVCGKSGHWAKDCPER----------------KDRKSANMIISEGGG 385

Query: 256 TELH---LATPTS---SKDWWYDSGAAIHVCND 176
           T  +   L T  S   S DWW D+GA IHVC D
Sbjct: 386 TSGYGKILPTVLSVFHSPDWWVDTGANIHVCAD 418



 Score = 52.4 bits (124), Expect(2) = 1e-25
 Identities = 27/55 (49%), Positives = 34/55 (61%)
 Frame = -2

Query: 167 FKNYEILDGQQVVMANGVRAKVLGRGDVHLDLTSGKKMVLTNVLHVPDVVKNLVS 3
           F +Y++  G  ++M NG  A V G G V L  TSGK + L NV HVP + KNLVS
Sbjct: 422 FSSYQVGRGSSLLMGNGSLAAVHGVGTVDLKFTSGKTVQLKNVQHVPSIKKNLVS 476


>gb|ABA98084.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1298

 Score = 90.9 bits (224), Expect(2) = 1e-25
 Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 19/213 (8%)
 Frame = -3

Query: 757 FKLDDSSSLMDQIHNLQVIVSKLKDYGVEISESMQVGAIIAKLPSSWNDYQKKLFHTSEI 578
           +K+ D  S+++Q H +Q++  +L++   E+ +    G IIAKLP SW+D+   L H  + 
Sbjct: 227 YKMVDDRSVVEQAHEIQMLAKELENNNCELPDKFVAGGIIAKLPPSWSDFATSLKHKRQE 286

Query: 577 LTISSVLKHLRIEEGARI--LHKKEFDSDPRVNMVHEKK----FKNKR-------KNSEN 437
            ++  ++  L +EE AR   +  K+ +     NMV +K       NK+       K + N
Sbjct: 287 FSVPDLIGSLGVEEKARAKDVRGKKVEGGSSANMVQKKNPHASHNNKKVKPDVKPKAATN 346

Query: 436 ADSEDKKKKNRVCYNCGKKGHYKAECXXXXXXXXXXXXXXXXNLVEDATEIIAMLSLGTV 257
              + K K    C+ CGK GH+  +C                   +D      ++S G  
Sbjct: 347 FKKKSKGKAKGDCFVCGKSGHWAKDCPER----------------KDRKSANMIISEGGG 390

Query: 256 TELH---LATPTS---SKDWWYDSGAAIHVCND 176
           T  +   L T  S   S DWW D+GA IHVC D
Sbjct: 391 TSGYGKILPTVLSVFHSPDWWVDTGANIHVCAD 423



 Score = 52.4 bits (124), Expect(2) = 1e-25
 Identities = 27/55 (49%), Positives = 34/55 (61%)
 Frame = -2

Query: 167 FKNYEILDGQQVVMANGVRAKVLGRGDVHLDLTSGKKMVLTNVLHVPDVVKNLVS 3
           F +Y++  G  ++M NG  A V G G V L  TSGK + L NV HVP + KNLVS
Sbjct: 427 FSSYQVGRGSSLLMGNGSLAAVHGVGTVDLKFTSGKTVQLKNVQHVPSIKKNLVS 481