BLASTX nr result

ID: Rehmannia22_contig00028523 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00028523
         (338 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004242706.1| PREDICTED: uncharacterized protein LOC101250...    69   8e-10
ref|XP_006359529.1| PREDICTED: uncharacterized protein LOC102590...    64   2e-08
ref|XP_004139268.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    64   2e-08
gb|AFK38095.1| unknown [Lotus japonicus]                               60   2e-07
gb|EOY31305.1| RING/U-box superfamily protein [Theobroma cacao]        60   3e-07
gb|AFK42549.1| unknown [Lotus japonicus]                               58   1e-06
gb|EPS73396.1| hypothetical protein M569_01360, partial [Genlise...    57   3e-06
ref|XP_004287232.1| PREDICTED: uncharacterized protein LOC101295...    57   3e-06
emb|CBI25596.3| unnamed protein product [Vitis vinifera]               56   4e-06
ref|XP_002266038.1| PREDICTED: E3 ubiquitin-protein ligase arkad...    56   4e-06
emb|CAN73727.1| hypothetical protein VITISV_034074 [Vitis vinifera]    56   4e-06

>ref|XP_004242706.1| PREDICTED: uncharacterized protein LOC101250706 [Solanum
           lycopersicum]
          Length = 198

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 34/55 (61%), Positives = 40/55 (72%)
 Frame = +3

Query: 171 MAGMLPGVEAARRRRFHQKSNNINNYYGSEITQTRRSSFSLYASTHDFHLCSTSS 335
           MAGMLPGVE ARRRRFHQ +  I++   S  + TRRSSF LY S H+ HL S+SS
Sbjct: 1   MAGMLPGVECARRRRFHQSNGCIDSSNTSSFSSTRRSSFCLYTSNHEHHLNSSSS 55


>ref|XP_006359529.1| PREDICTED: uncharacterized protein LOC102590358 [Solanum tuberosum]
          Length = 198

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 33/55 (60%), Positives = 39/55 (70%)
 Frame = +3

Query: 171 MAGMLPGVEAARRRRFHQKSNNINNYYGSEITQTRRSSFSLYASTHDFHLCSTSS 335
           MAGMLPGVE ARRRRFHQ S  I++   +  + TRRSSF LY S H+  L S+SS
Sbjct: 1   MAGMLPGVECARRRRFHQSSGCIDSSNTTGFSSTRRSSFCLYTSNHEHPLNSSSS 55


>ref|XP_004139268.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
           gi|449493673|ref|XP_004159405.1| PREDICTED: E3
           ubiquitin-protein ligase RING1-like [Cucumis sativus]
          Length = 201

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 33/56 (58%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
 Frame = +3

Query: 171 MAGMLPGVEAARRRRFHQKSNNINN-YYGSEITQTRRSSFSLYASTHDFHLCSTSS 335
           MAGMLPGVE ARRRRFHQ  N+ ++ +   +   TRR SF LY S  DFHL S+SS
Sbjct: 1   MAGMLPGVECARRRRFHQSINSSDSPFTAGKSGSTRRPSFCLYTSNRDFHLISSSS 56


>gb|AFK38095.1| unknown [Lotus japonicus]
          Length = 183

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 30/56 (53%), Positives = 39/56 (69%)
 Frame = +3

Query: 171 MAGMLPGVEAARRRRFHQKSNNINNYYGSEITQTRRSSFSLYASTHDFHLCSTSSM 338
           MAGMLPGVE+ARRRRFH+    ++    +    TRRSSF LYAS H+  + S+SS+
Sbjct: 1   MAGMLPGVESARRRRFHKSGGCLDGPLLAPHNPTRRSSFCLYASNHESRISSSSSL 56


>gb|EOY31305.1| RING/U-box superfamily protein [Theobroma cacao]
          Length = 191

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 32/55 (58%), Positives = 35/55 (63%)
 Frame = +3

Query: 171 MAGMLPGVEAARRRRFHQKSNNINNYYGSEITQTRRSSFSLYASTHDFHLCSTSS 335
           MAGMLPGVE ARRRRFHQ     ++     I  TRRSSF LY S H+ H  S SS
Sbjct: 1   MAGMLPGVECARRRRFHQSGGASDSPSTVPIGWTRRSSFCLYTSNHETHHSSVSS 55


>gb|AFK42549.1| unknown [Lotus japonicus]
          Length = 183

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 29/56 (51%), Positives = 39/56 (69%)
 Frame = +3

Query: 171 MAGMLPGVEAARRRRFHQKSNNINNYYGSEITQTRRSSFSLYASTHDFHLCSTSSM 338
           MAGMLPGVE+ARRRRFH+    ++    +    TRRSSF LYAS ++  + S+SS+
Sbjct: 1   MAGMLPGVESARRRRFHKSGGCLDGPLLAPHNSTRRSSFCLYASNNESRISSSSSL 56


>gb|EPS73396.1| hypothetical protein M569_01360, partial [Genlisea aurea]
          Length = 198

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 31/54 (57%), Positives = 37/54 (68%)
 Frame = +3

Query: 171 MAGMLPGVEAARRRRFHQKSNNINNYYGSEITQTRRSSFSLYASTHDFHLCSTS 332
           MAG LPGVEAARRRR H  S N+ +   +    TRR SF LYA++HDFH  S+S
Sbjct: 1   MAGSLPGVEAARRRRIH--STNLFSPGTTAGASTRRPSFCLYATSHDFHSISSS 52


>ref|XP_004287232.1| PREDICTED: uncharacterized protein LOC101295556 [Fragaria vesca
           subsp. vesca]
          Length = 202

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 34/58 (58%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
 Frame = +3

Query: 171 MAGMLPGVEAARRRRFHQKSNNIN--NYYGSEITQTRRSSFSLYASTHDFHLCSTSSM 338
           MAGMLPGVE ARRRR HQ S + N  N  G     TRRSSF LYAS ++ H  ST S+
Sbjct: 1   MAGMLPGVECARRRRVHQSSESPNPANTNGC----TRRSSFCLYASNNETHQTSTFSL 54


>emb|CBI25596.3| unnamed protein product [Vitis vinifera]
          Length = 118

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 30/55 (54%), Positives = 36/55 (65%)
 Frame = +3

Query: 171 MAGMLPGVEAARRRRFHQKSNNINNYYGSEITQTRRSSFSLYASTHDFHLCSTSS 335
           MAGMLPGVE ARRRRFHQ     ++   +    TRRSSF LY S H+ H  ++SS
Sbjct: 1   MAGMLPGVECARRRRFHQSGGCSDSPTVAVHGCTRRSSFCLYTSNHENHHATSSS 55


>ref|XP_002266038.1| PREDICTED: E3 ubiquitin-protein ligase arkadia-like isoform 1
           [Vitis vinifera]
          Length = 193

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 30/55 (54%), Positives = 36/55 (65%)
 Frame = +3

Query: 171 MAGMLPGVEAARRRRFHQKSNNINNYYGSEITQTRRSSFSLYASTHDFHLCSTSS 335
           MAGMLPGVE ARRRRFHQ     ++   +    TRRSSF LY S H+ H  ++SS
Sbjct: 1   MAGMLPGVECARRRRFHQSGGCSDSPTVAVHGCTRRSSFCLYTSNHENHHATSSS 55


>emb|CAN73727.1| hypothetical protein VITISV_034074 [Vitis vinifera]
          Length = 193

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 30/55 (54%), Positives = 36/55 (65%)
 Frame = +3

Query: 171 MAGMLPGVEAARRRRFHQKSNNINNYYGSEITQTRRSSFSLYASTHDFHLCSTSS 335
           MAGMLPGVE ARRRRFHQ     ++   +    TRRSSF LY S H+ H  ++SS
Sbjct: 1   MAGMLPGVECARRRRFHQSGGCSDSPTVAVHGCTRRSSFCLYTSNHENHHATSSS 55


Top