BLASTX nr result
ID: Rehmannia22_contig00028401
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00028401
(788 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002267010.1| PREDICTED: RNA pseudourine synthase 3, mitoc... 429 e-118
emb|CBI18448.3| unnamed protein product [Vitis vinifera] 429 e-118
gb|EOY26277.1| Pseudouridine synthase family protein [Theobroma ... 424 e-116
ref|XP_006468112.1| PREDICTED: RNA pseudouridine synthase 3, mit... 421 e-115
ref|XP_006436406.1| hypothetical protein CICLE_v10031422mg [Citr... 420 e-115
ref|XP_006436405.1| hypothetical protein CICLE_v10031422mg [Citr... 420 e-115
ref|XP_006353749.1| PREDICTED: RNA pseudouridine synthase 3, mit... 418 e-115
ref|XP_004243668.1| PREDICTED: RNA pseudourine synthase 3, mitoc... 417 e-114
ref|XP_002526838.1| ribosomal pseudouridine synthase, putative [... 417 e-114
gb|EMJ11188.1| hypothetical protein PRUPE_ppa005240mg [Prunus pe... 414 e-113
gb|EXC58952.1| RNA pseudourine synthase 3 [Morus notabilis] 414 e-113
gb|EXC41018.1| RNA pseudourine synthase 3 [Morus notabilis] 411 e-112
ref|XP_004515176.1| PREDICTED: RNA pseudourine synthase 3, mitoc... 409 e-112
dbj|BAD43982.1| unnamed protein product [Arabidopsis thaliana] 406 e-111
ref|NP_178012.2| RNA pseudourine synthase 3 [Arabidopsis thalian... 406 e-111
ref|XP_006389943.1| hypothetical protein EUTSA_v10018480mg [Eutr... 405 e-111
ref|XP_006601250.1| PREDICTED: RNA pseudouridine synthase 3, mit... 403 e-110
ref|XP_006385075.1| hypothetical protein POPTR_0004s23670g [Popu... 402 e-110
ref|XP_004158518.1| PREDICTED: RNA pseudourine synthase 3, mitoc... 402 e-110
gb|ESW32964.1| hypothetical protein PHAVU_001G032500g [Phaseolus... 402 e-110
>ref|XP_002267010.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Vitis
vinifera]
Length = 479
Score = 429 bits (1104), Expect = e-118
Identities = 207/253 (81%), Positives = 224/253 (88%)
Frame = +3
Query: 3 LVHRLDRESSGLLLMGRTKESISHLHWLFSDVRKAKPFSKEWNDACEEMYQRYWALVIGS 182
LVHRLDRESSGLLLMGRTKES++HLHWLFSD+ KAK SK W+DACE QRYWALVIGS
Sbjct: 227 LVHRLDRESSGLLLMGRTKESVAHLHWLFSDINKAKSLSKAWDDACEATCQRYWALVIGS 286
Query: 183 PKQKEGLICAPLTKVLLDDGETERVILANNSGLEASQEAITEYRVLGPTINGCSWIELRP 362
PKQKEG+I APL+KVLLDDG+TERVILAN SGLEASQEAITEYRVLGP INGCSWIEL P
Sbjct: 287 PKQKEGVIHAPLSKVLLDDGKTERVILANQSGLEASQEAITEYRVLGPMINGCSWIELCP 346
Query: 363 YTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDFEPMTGEPYKLRRPEGLDV 542
TSRKHQLRVHCAEALGTPIVGDYKYGWFVH RWKQMPRVD EP TG+PYK+RRPEGLDV
Sbjct: 347 RTSRKHQLRVHCAEALGTPIVGDYKYGWFVHRRWKQMPRVDLEPTTGKPYKMRRPEGLDV 406
Query: 543 QKGSVLSKVPLLHLHCREMVLPNVAKFIELHKRPFGNYHVDPEHDSKPDILRFVAPMPSH 722
QKGSVLSKVPLLHLHCRE++LPN+AKF+ + N + P+ KPDILRFVA MP+H
Sbjct: 407 QKGSVLSKVPLLHLHCRELILPNIAKFLPILDPKPKNQNQYPKLSLKPDILRFVASMPNH 466
Query: 723 MKISWNLMSSYLV 761
MKISWNLMSSYLV
Sbjct: 467 MKISWNLMSSYLV 479
>emb|CBI18448.3| unnamed protein product [Vitis vinifera]
Length = 481
Score = 429 bits (1104), Expect = e-118
Identities = 207/253 (81%), Positives = 224/253 (88%)
Frame = +3
Query: 3 LVHRLDRESSGLLLMGRTKESISHLHWLFSDVRKAKPFSKEWNDACEEMYQRYWALVIGS 182
LVHRLDRESSGLLLMGRTKES++HLHWLFSD+ KAK SK W+DACE QRYWALVIGS
Sbjct: 229 LVHRLDRESSGLLLMGRTKESVAHLHWLFSDINKAKSLSKAWDDACEATCQRYWALVIGS 288
Query: 183 PKQKEGLICAPLTKVLLDDGETERVILANNSGLEASQEAITEYRVLGPTINGCSWIELRP 362
PKQKEG+I APL+KVLLDDG+TERVILAN SGLEASQEAITEYRVLGP INGCSWIEL P
Sbjct: 289 PKQKEGVIHAPLSKVLLDDGKTERVILANQSGLEASQEAITEYRVLGPMINGCSWIELCP 348
Query: 363 YTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDFEPMTGEPYKLRRPEGLDV 542
TSRKHQLRVHCAEALGTPIVGDYKYGWFVH RWKQMPRVD EP TG+PYK+RRPEGLDV
Sbjct: 349 RTSRKHQLRVHCAEALGTPIVGDYKYGWFVHRRWKQMPRVDLEPTTGKPYKMRRPEGLDV 408
Query: 543 QKGSVLSKVPLLHLHCREMVLPNVAKFIELHKRPFGNYHVDPEHDSKPDILRFVAPMPSH 722
QKGSVLSKVPLLHLHCRE++LPN+AKF+ + N + P+ KPDILRFVA MP+H
Sbjct: 409 QKGSVLSKVPLLHLHCRELILPNIAKFLPILDPKPKNQNQYPKLSLKPDILRFVASMPNH 468
Query: 723 MKISWNLMSSYLV 761
MKISWNLMSSYLV
Sbjct: 469 MKISWNLMSSYLV 481
>gb|EOY26277.1| Pseudouridine synthase family protein [Theobroma cacao]
Length = 471
Score = 424 bits (1091), Expect = e-116
Identities = 202/253 (79%), Positives = 221/253 (87%)
Frame = +3
Query: 3 LVHRLDRESSGLLLMGRTKESISHLHWLFSDVRKAKPFSKEWNDACEEMYQRYWALVIGS 182
LVHRLDRESSGLLLMGRTKES++HLHWLF+D+ K K WNDAC+ YQR+WALVIG+
Sbjct: 221 LVHRLDRESSGLLLMGRTKESVAHLHWLFNDLNTVKSSCKAWNDACDVKYQRFWALVIGT 280
Query: 183 PKQKEGLICAPLTKVLLDDGETERVILANNSGLEASQEAITEYRVLGPTINGCSWIELRP 362
PK+KEGLICAPL+K+LLDDG+TERVILA N GLEASQEAITEYRVLGP INGCSWIELRP
Sbjct: 281 PKEKEGLICAPLSKILLDDGKTERVILAQNVGLEASQEAITEYRVLGPMINGCSWIELRP 340
Query: 363 YTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDFEPMTGEPYKLRRPEGLDV 542
TSRKHQLRVHCAEALGTPIVGDYKYGWFVH RWKQMPRVD EP TG+PYKLRRPEGLDV
Sbjct: 341 LTSRKHQLRVHCAEALGTPIVGDYKYGWFVHRRWKQMPRVDIEPTTGKPYKLRRPEGLDV 400
Query: 543 QKGSVLSKVPLLHLHCREMVLPNVAKFIELHKRPFGNYHVDPEHDSKPDILRFVAPMPSH 722
QKGSVLSKVPLLHLHCRE+VLPN+AKF+ + + + P KPD+LRFVA MP H
Sbjct: 401 QKGSVLSKVPLLHLHCRELVLPNIAKFLPVLNK--NTETLPPALSMKPDLLRFVATMPKH 458
Query: 723 MKISWNLMSSYLV 761
MKISWNLMSSYLV
Sbjct: 459 MKISWNLMSSYLV 471
>ref|XP_006468112.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like [Citrus
sinensis]
Length = 471
Score = 421 bits (1082), Expect = e-115
Identities = 206/256 (80%), Positives = 225/256 (87%), Gaps = 3/256 (1%)
Frame = +3
Query: 3 LVHRLDRESSGLLLMGRTKESISHLHWLFSDVRKAKPFSKEWNDACEEMYQRYWALVIGS 182
LVHRLDRESSGLLLMGRTKES+S L WLFSDV K+K SK WNDACE MYQRYWALVIGS
Sbjct: 218 LVHRLDRESSGLLLMGRTKESVSLLTWLFSDVNKSKSLSKAWNDACEAMYQRYWALVIGS 277
Query: 183 PKQKEGLICAPLTKVLLDDGETERVILANNSGLEASQEAITEYRVLGPTINGCSWIELRP 362
P++K+G+I APL+KVLLDDG+TER+ILA NSGLEASQEA+TEYRVLGP INGCSWIELRP
Sbjct: 278 PREKQGIIRAPLSKVLLDDGKTERIILAQNSGLEASQEAMTEYRVLGPMINGCSWIELRP 337
Query: 363 YTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDFEPMTGEPYKLRRPEGLDV 542
T RKHQLRVHCAEALGTPIVGDYKYGWFVH RWKQMPRVD EP +G+PYKLRRP+GLDV
Sbjct: 338 LTCRKHQLRVHCAEALGTPIVGDYKYGWFVHRRWKQMPRVDIEPTSGKPYKLRRPDGLDV 397
Query: 543 QKGSVLSKVPLLHLHCREMVLPNVAKFIELHKRPFGNYHVDPEHDSK---PDILRFVAPM 713
QKGSVLSKVPLLHLHCRE+VLPN+AKFI + + N + P SK PD+LRFVA M
Sbjct: 398 QKGSVLSKVPLLHLHCRELVLPNIAKFINVLNQKSDN--LFPTLSSKPDGPDLLRFVASM 455
Query: 714 PSHMKISWNLMSSYLV 761
PSHMKISWNLMSSYLV
Sbjct: 456 PSHMKISWNLMSSYLV 471
>ref|XP_006436406.1| hypothetical protein CICLE_v10031422mg [Citrus clementina]
gi|557538602|gb|ESR49646.1| hypothetical protein
CICLE_v10031422mg [Citrus clementina]
Length = 471
Score = 420 bits (1080), Expect = e-115
Identities = 206/256 (80%), Positives = 224/256 (87%), Gaps = 3/256 (1%)
Frame = +3
Query: 3 LVHRLDRESSGLLLMGRTKESISHLHWLFSDVRKAKPFSKEWNDACEEMYQRYWALVIGS 182
LVHRLDRESSGLLLMGRTKES+S L WLFSDV K+K SK WNDACE MYQRYWALVIGS
Sbjct: 218 LVHRLDRESSGLLLMGRTKESVSLLTWLFSDVNKSKSLSKAWNDACEAMYQRYWALVIGS 277
Query: 183 PKQKEGLICAPLTKVLLDDGETERVILANNSGLEASQEAITEYRVLGPTINGCSWIELRP 362
PK+K+G+I APL+KVLLDDG+TER+ILA NSGLEASQEA+TEYRVLGP INGCSWIELRP
Sbjct: 278 PKEKQGIIHAPLSKVLLDDGKTERIILAQNSGLEASQEAVTEYRVLGPMINGCSWIELRP 337
Query: 363 YTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDFEPMTGEPYKLRRPEGLDV 542
T RKHQLRVHCAEALGTPIVGDYKYGWFVH RWKQMPRVD EP +G+PYKLRRP+GLDV
Sbjct: 338 LTCRKHQLRVHCAEALGTPIVGDYKYGWFVHRRWKQMPRVDIEPTSGKPYKLRRPDGLDV 397
Query: 543 QKGSVLSKVPLLHLHCREMVLPNVAKFIELHKRPFGNYHVDPEHDSK---PDILRFVAPM 713
QKGSVLSKVPLLHLHCRE+VLPN+AKF + + N + P SK PD+LRFVA M
Sbjct: 398 QKGSVLSKVPLLHLHCRELVLPNIAKFRNVLNQKSDN--LFPTLSSKPDGPDLLRFVASM 455
Query: 714 PSHMKISWNLMSSYLV 761
PSHMKISWNLMSSYLV
Sbjct: 456 PSHMKISWNLMSSYLV 471
>ref|XP_006436405.1| hypothetical protein CICLE_v10031422mg [Citrus clementina]
gi|557538601|gb|ESR49645.1| hypothetical protein
CICLE_v10031422mg [Citrus clementina]
Length = 343
Score = 420 bits (1080), Expect = e-115
Identities = 206/256 (80%), Positives = 224/256 (87%), Gaps = 3/256 (1%)
Frame = +3
Query: 3 LVHRLDRESSGLLLMGRTKESISHLHWLFSDVRKAKPFSKEWNDACEEMYQRYWALVIGS 182
LVHRLDRESSGLLLMGRTKES+S L WLFSDV K+K SK WNDACE MYQRYWALVIGS
Sbjct: 90 LVHRLDRESSGLLLMGRTKESVSLLTWLFSDVNKSKSLSKAWNDACEAMYQRYWALVIGS 149
Query: 183 PKQKEGLICAPLTKVLLDDGETERVILANNSGLEASQEAITEYRVLGPTINGCSWIELRP 362
PK+K+G+I APL+KVLLDDG+TER+ILA NSGLEASQEA+TEYRVLGP INGCSWIELRP
Sbjct: 150 PKEKQGIIHAPLSKVLLDDGKTERIILAQNSGLEASQEAVTEYRVLGPMINGCSWIELRP 209
Query: 363 YTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDFEPMTGEPYKLRRPEGLDV 542
T RKHQLRVHCAEALGTPIVGDYKYGWFVH RWKQMPRVD EP +G+PYKLRRP+GLDV
Sbjct: 210 LTCRKHQLRVHCAEALGTPIVGDYKYGWFVHRRWKQMPRVDIEPTSGKPYKLRRPDGLDV 269
Query: 543 QKGSVLSKVPLLHLHCREMVLPNVAKFIELHKRPFGNYHVDPEHDSK---PDILRFVAPM 713
QKGSVLSKVPLLHLHCRE+VLPN+AKF + + N + P SK PD+LRFVA M
Sbjct: 270 QKGSVLSKVPLLHLHCRELVLPNIAKFRNVLNQKSDN--LFPTLSSKPDGPDLLRFVASM 327
Query: 714 PSHMKISWNLMSSYLV 761
PSHMKISWNLMSSYLV
Sbjct: 328 PSHMKISWNLMSSYLV 343
>ref|XP_006353749.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like isoform
X1 [Solanum tuberosum] gi|565374397|ref|XP_006353750.1|
PREDICTED: RNA pseudouridine synthase 3,
mitochondrial-like isoform X2 [Solanum tuberosum]
gi|565374399|ref|XP_006353751.1| PREDICTED: RNA
pseudouridine synthase 3, mitochondrial-like isoform X3
[Solanum tuberosum]
Length = 475
Score = 418 bits (1075), Expect = e-115
Identities = 200/253 (79%), Positives = 222/253 (87%)
Frame = +3
Query: 3 LVHRLDRESSGLLLMGRTKESISHLHWLFSDVRKAKPFSKEWNDACEEMYQRYWALVIGS 182
LVHRLDRESSGL LMGRT+ESISHLH LFS+ +K+K SK WNDAC YQRYWALVIGS
Sbjct: 226 LVHRLDRESSGLHLMGRTEESISHLHLLFSNTKKSKSLSKAWNDACGSTYQRYWALVIGS 285
Query: 183 PKQKEGLICAPLTKVLLDDGETERVILANNSGLEASQEAITEYRVLGPTINGCSWIELRP 362
PK+KEG+I APLTKVLLDDG TERV+LA SGLEAS EA+TEYR+LGP INGCSWIELRP
Sbjct: 286 PKEKEGVISAPLTKVLLDDGRTERVMLAQQSGLEASDEAVTEYRLLGPMINGCSWIELRP 345
Query: 363 YTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDFEPMTGEPYKLRRPEGLDV 542
+TSRKHQ+RVHCAEALGTPIVGDYKYGWFVH +WKQMPRVD EP TG+PY+L+RPEGLDV
Sbjct: 346 HTSRKHQIRVHCAEALGTPIVGDYKYGWFVHRKWKQMPRVDVEPTTGKPYRLKRPEGLDV 405
Query: 543 QKGSVLSKVPLLHLHCREMVLPNVAKFIELHKRPFGNYHVDPEHDSKPDILRFVAPMPSH 722
QKGSVLSKVPLLHLHCRE+VLPN+AKFIELH R + ++ SKPD+LRFVAPMPS
Sbjct: 406 QKGSVLSKVPLLHLHCRELVLPNIAKFIELHSRKTKKH---SDYSSKPDLLRFVAPMPSP 462
Query: 723 MKISWNLMSSYLV 761
MKISW LMSS L+
Sbjct: 463 MKISWKLMSSCLI 475
>ref|XP_004243668.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Solanum
lycopersicum]
Length = 475
Score = 417 bits (1072), Expect = e-114
Identities = 200/253 (79%), Positives = 222/253 (87%)
Frame = +3
Query: 3 LVHRLDRESSGLLLMGRTKESISHLHWLFSDVRKAKPFSKEWNDACEEMYQRYWALVIGS 182
LVHRLDRESSGL LMGRT+ESISHLH LFS+ +++K SK WNDAC YQRYWALVIGS
Sbjct: 226 LVHRLDRESSGLHLMGRTEESISHLHLLFSNTKRSKSLSKAWNDACGSTYQRYWALVIGS 285
Query: 183 PKQKEGLICAPLTKVLLDDGETERVILANNSGLEASQEAITEYRVLGPTINGCSWIELRP 362
PK KEG+I APLTKVLLDDG TERV+LA SGLEAS EA+TEYR+LGP INGCSWIELRP
Sbjct: 286 PKVKEGVISAPLTKVLLDDGRTERVMLAQQSGLEASDEAVTEYRLLGPMINGCSWIELRP 345
Query: 363 YTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDFEPMTGEPYKLRRPEGLDV 542
+TSRKHQLRVHCAEALGTPIVGDYKYGWFVH +WKQMPRVD EP+TG+PY+L+RPEGLDV
Sbjct: 346 HTSRKHQLRVHCAEALGTPIVGDYKYGWFVHRKWKQMPRVDVEPITGKPYRLKRPEGLDV 405
Query: 543 QKGSVLSKVPLLHLHCREMVLPNVAKFIELHKRPFGNYHVDPEHDSKPDILRFVAPMPSH 722
QKGSVLSKVPLLHLHCRE+VLPN+AKFIELH R + ++ SKPD+LRFVAPMPS
Sbjct: 406 QKGSVLSKVPLLHLHCRELVLPNIAKFIELHSR---KTRKNTDYSSKPDLLRFVAPMPSP 462
Query: 723 MKISWNLMSSYLV 761
MKISW LMSS L+
Sbjct: 463 MKISWKLMSSCLI 475
>ref|XP_002526838.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
gi|223533842|gb|EEF35573.1| ribosomal pseudouridine
synthase, putative [Ricinus communis]
Length = 468
Score = 417 bits (1071), Expect = e-114
Identities = 202/253 (79%), Positives = 219/253 (86%)
Frame = +3
Query: 3 LVHRLDRESSGLLLMGRTKESISHLHWLFSDVRKAKPFSKEWNDACEEMYQRYWALVIGS 182
LV RLDRESSGLLLMGRTKESI HL WLFSDV K+ K WNDAC+ YQRYWALVIGS
Sbjct: 218 LVQRLDRESSGLLLMGRTKESIDHLQWLFSDVNKSNSRCKAWNDACKATYQRYWALVIGS 277
Query: 183 PKQKEGLICAPLTKVLLDDGETERVILANNSGLEASQEAITEYRVLGPTINGCSWIELRP 362
PK+KEGLI APL+KVLL+DG+TERV+LA +SGLEASQEA+TEYRVLGP INGCSWIELRP
Sbjct: 278 PKEKEGLIRAPLSKVLLNDGKTERVVLAQHSGLEASQEALTEYRVLGPRINGCSWIELRP 337
Query: 363 YTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDFEPMTGEPYKLRRPEGLDV 542
TSRKHQLRVHCAEALGTPIVGDYKYGW VH RWKQMPRVD EP +G+PYKLRRP GLDV
Sbjct: 338 LTSRKHQLRVHCAEALGTPIVGDYKYGWCVHQRWKQMPRVDIEPFSGKPYKLRRPAGLDV 397
Query: 543 QKGSVLSKVPLLHLHCREMVLPNVAKFIELHKRPFGNYHVDPEHDSKPDILRFVAPMPSH 722
QKGSVLSKVPLLHLHCRE VLPN+AKF+ + N H P D+KPD+LRFVA MP+H
Sbjct: 398 QKGSVLSKVPLLHLHCREFVLPNIAKFLAVLNEKSENIH--PALDAKPDLLRFVASMPTH 455
Query: 723 MKISWNLMSSYLV 761
MKISWNLMSSYLV
Sbjct: 456 MKISWNLMSSYLV 468
>gb|EMJ11188.1| hypothetical protein PRUPE_ppa005240mg [Prunus persica]
Length = 471
Score = 414 bits (1065), Expect = e-113
Identities = 201/253 (79%), Positives = 220/253 (86%)
Frame = +3
Query: 3 LVHRLDRESSGLLLMGRTKESISHLHWLFSDVRKAKPFSKEWNDACEEMYQRYWALVIGS 182
LVHRLDRESSGL LMGRTKES+S L WL++D K K + W+DACE YQRYWALVIGS
Sbjct: 221 LVHRLDRESSGLHLMGRTKESVSLLQWLYTDFNKGKSSCQAWDDACEARYQRYWALVIGS 280
Query: 183 PKQKEGLICAPLTKVLLDDGETERVILANNSGLEASQEAITEYRVLGPTINGCSWIELRP 362
PK+KEGLICAPL+KVLLD+G+TERVILA+ SGLEASQ+AIT+YRVLGPTINGCSWIELRP
Sbjct: 281 PKEKEGLICAPLSKVLLDNGKTERVILAHQSGLEASQKAITQYRVLGPTINGCSWIELRP 340
Query: 363 YTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDFEPMTGEPYKLRRPEGLDV 542
TSRKHQLRVHCAEALGTPIVGDYKYGWFVH RWKQMP VD EP +G PYKLRRP GLDV
Sbjct: 341 LTSRKHQLRVHCAEALGTPIVGDYKYGWFVHRRWKQMPHVDVEPTSGLPYKLRRPAGLDV 400
Query: 543 QKGSVLSKVPLLHLHCREMVLPNVAKFIELHKRPFGNYHVDPEHDSKPDILRFVAPMPSH 722
QKGSVLSKVPLLHLHCRE+VLPN+AKF+ + + + H P SKPDILRFVA MPSH
Sbjct: 401 QKGSVLSKVPLLHLHCRELVLPNIAKFLLILDQKLDSLH--PAVSSKPDILRFVASMPSH 458
Query: 723 MKISWNLMSSYLV 761
MKISWNLMSSYLV
Sbjct: 459 MKISWNLMSSYLV 471
>gb|EXC58952.1| RNA pseudourine synthase 3 [Morus notabilis]
Length = 449
Score = 414 bits (1063), Expect = e-113
Identities = 199/253 (78%), Positives = 222/253 (87%)
Frame = +3
Query: 3 LVHRLDRESSGLLLMGRTKESISHLHWLFSDVRKAKPFSKEWNDACEEMYQRYWALVIGS 182
LVHRLDR+SSGLLLMGRTKESISHL WLFS++ K WNDACE YQ+YWALVIGS
Sbjct: 206 LVHRLDRDSSGLLLMGRTKESISHLEWLFSNI-------KAWNDACEAKYQKYWALVIGS 258
Query: 183 PKQKEGLICAPLTKVLLDDGETERVILANNSGLEASQEAITEYRVLGPTINGCSWIELRP 362
PK+KEG+ICAPL+KVLL+DG+TERVILA+ +G +ASQEAITEYRVLGP INGCSW+ELRP
Sbjct: 259 PKEKEGIICAPLSKVLLNDGKTERVILAHQTGFQASQEAITEYRVLGPMINGCSWLELRP 318
Query: 363 YTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDFEPMTGEPYKLRRPEGLDV 542
TSRKHQLRVHCAEALGTPIVGDYKYGWFVH RWKQMP+V+ EP TG+PYKLRRPEGLDV
Sbjct: 319 LTSRKHQLRVHCAEALGTPIVGDYKYGWFVHKRWKQMPQVNIEPTTGKPYKLRRPEGLDV 378
Query: 543 QKGSVLSKVPLLHLHCREMVLPNVAKFIELHKRPFGNYHVDPEHDSKPDILRFVAPMPSH 722
QKGSV+SKVPLLHL CRE+VLPN+AKF+ + R N DP +SKPD+LRFVA MPSH
Sbjct: 379 QKGSVMSKVPLLHLQCRELVLPNIAKFLRVFDRKSQNQ--DPALESKPDLLRFVARMPSH 436
Query: 723 MKISWNLMSSYLV 761
MKISWNLMSSYLV
Sbjct: 437 MKISWNLMSSYLV 449
>gb|EXC41018.1| RNA pseudourine synthase 3 [Morus notabilis]
Length = 449
Score = 411 bits (1057), Expect = e-112
Identities = 198/253 (78%), Positives = 221/253 (87%)
Frame = +3
Query: 3 LVHRLDRESSGLLLMGRTKESISHLHWLFSDVRKAKPFSKEWNDACEEMYQRYWALVIGS 182
LVHRLDR+SSGLLLMGRTKESISHL WLFS++ K WNDACE YQ+YWALVIGS
Sbjct: 206 LVHRLDRDSSGLLLMGRTKESISHLEWLFSNI-------KAWNDACEAKYQKYWALVIGS 258
Query: 183 PKQKEGLICAPLTKVLLDDGETERVILANNSGLEASQEAITEYRVLGPTINGCSWIELRP 362
PK+KEG+ICAPL+KVLL+DG+TERVILA+ +G +ASQEAITEYRVLGP INGCSW+ELRP
Sbjct: 259 PKEKEGIICAPLSKVLLNDGKTERVILAHQTGFQASQEAITEYRVLGPMINGCSWLELRP 318
Query: 363 YTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDFEPMTGEPYKLRRPEGLDV 542
TSRKHQLRVHCAEALGTPIVGDYKYGW VH RWKQMP+V+ EP TG+PYKLRRPEGLDV
Sbjct: 319 LTSRKHQLRVHCAEALGTPIVGDYKYGWLVHKRWKQMPQVNIEPTTGKPYKLRRPEGLDV 378
Query: 543 QKGSVLSKVPLLHLHCREMVLPNVAKFIELHKRPFGNYHVDPEHDSKPDILRFVAPMPSH 722
QKGSV+SKVPLLHL CRE+VLPN+AKF+ + R N DP +SKPD+LRFVA MPSH
Sbjct: 379 QKGSVMSKVPLLHLQCRELVLPNIAKFLRVFDRKSENQ--DPALESKPDLLRFVARMPSH 436
Query: 723 MKISWNLMSSYLV 761
MKISWNLMSSYLV
Sbjct: 437 MKISWNLMSSYLV 449
>ref|XP_004515176.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like isoform
X1 [Cicer arietinum]
Length = 479
Score = 409 bits (1050), Expect = e-112
Identities = 190/253 (75%), Positives = 220/253 (86%)
Frame = +3
Query: 3 LVHRLDRESSGLLLMGRTKESISHLHWLFSDVRKAKPFSKEWNDACEEMYQRYWALVIGS 182
LVHRLDRESSG+LL+GRTK+S+SHL WLFS++ K K WNDACE YQRYWALVIG+
Sbjct: 229 LVHRLDRESSGILLLGRTKDSVSHLQWLFSNINNTKSSCKAWNDACESTYQRYWALVIGT 288
Query: 183 PKQKEGLICAPLTKVLLDDGETERVILANNSGLEASQEAITEYRVLGPTINGCSWIELRP 362
PK+KEG+I APL+KVLL+DG+TERVILA+ S +E QEA+TEYRVLGP INGCSW+ELRP
Sbjct: 289 PKEKEGIIHAPLSKVLLNDGKTERVILAHESSIEPHQEAVTEYRVLGPKINGCSWVELRP 348
Query: 363 YTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDFEPMTGEPYKLRRPEGLDV 542
T RKHQLRVHCAEALGTPIVGDYKYGWFVH+RWKQMPRVD EP TG+PYKLRRPEGLDV
Sbjct: 349 LTYRKHQLRVHCAEALGTPIVGDYKYGWFVHSRWKQMPRVDIEPTTGKPYKLRRPEGLDV 408
Query: 543 QKGSVLSKVPLLHLHCREMVLPNVAKFIELHKRPFGNYHVDPEHDSKPDILRFVAPMPSH 722
QKGSVLSKVPLLHLHCRE+ LPN+AKF+ + ++ + +DP +PD+LRFVA MP+H
Sbjct: 409 QKGSVLSKVPLLHLHCRELALPNIAKFLNVLEK--SSQQLDPSLSLQPDVLRFVATMPNH 466
Query: 723 MKISWNLMSSYLV 761
M+ISWNLMSSYLV
Sbjct: 467 MRISWNLMSSYLV 479
>dbj|BAD43982.1| unnamed protein product [Arabidopsis thaliana]
Length = 326
Score = 406 bits (1043), Expect = e-111
Identities = 196/256 (76%), Positives = 217/256 (84%), Gaps = 3/256 (1%)
Frame = +3
Query: 3 LVHRLDRESSGLLLMGRTKESISHLHWLFSDVRKAKPFSKEWNDACEEMYQRYWALVIGS 182
LVHRLDRE+SGLL+MGRTKESI +LH +FSD + K WN ACE MYQ+YWALVIGS
Sbjct: 75 LVHRLDRETSGLLVMGRTKESIDYLHSVFSDYKGRNSSCKAWNKACEAMYQQYWALVIGS 134
Query: 183 PKQKEGLICAPLTKVLLDDGETERVILANNSGLEASQEAITEYRVLGPTINGCSWIELRP 362
PK+KEGLI APL+KVLLDDG+T+RV+LA SG EASQ+AITEY+VLGP INGCSW+ELRP
Sbjct: 135 PKEKEGLISAPLSKVLLDDGKTDRVVLAQGSGFEASQDAITEYKVLGPKINGCSWVELRP 194
Query: 363 YTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDFEPMTGEPYKLRRPEGLDV 542
TSRKHQLRVHCAEALGTPIVGDYKYGWFVH RWKQMP+VD EP TG+PYKLRRPEGLDV
Sbjct: 195 ITSRKHQLRVHCAEALGTPIVGDYKYGWFVHKRWKQMPQVDIEPTTGKPYKLRRPEGLDV 254
Query: 543 QKGSVLSKVPLLHLHCREMVLPNVAKFIELHKRPFGNYHVDPEHD---SKPDILRFVAPM 713
QKGSVLSKVPLLHLHCREMVLPN+AKF+ + +P H KPD+LRFVA M
Sbjct: 255 QKGSVLSKVPLLHLHCREMVLPNIAKFLHV----MNQQETEPLHTGIIDKPDLLRFVASM 310
Query: 714 PSHMKISWNLMSSYLV 761
PSHMKISWNLMSSYLV
Sbjct: 311 PSHMKISWNLMSSYLV 326
>ref|NP_178012.2| RNA pseudourine synthase 3 [Arabidopsis thaliana]
gi|75110951|sp|Q5XET6.1|PUS3_ARATH RecName: Full=RNA
pseudouridine synthase 3, mitochondrial; AltName:
Full=RNA pseudouridylate synthase 3; AltName:
Full=RNA-uridine isomerase 3; Flags: Precursor
gi|53850479|gb|AAU95416.1| At1g78910 [Arabidopsis
thaliana] gi|56790228|gb|AAW30031.1| At1g78910
[Arabidopsis thaliana] gi|332198052|gb|AEE36173.1| RNA
pseudourine synthase 3 [Arabidopsis thaliana]
Length = 478
Score = 406 bits (1043), Expect = e-111
Identities = 196/256 (76%), Positives = 217/256 (84%), Gaps = 3/256 (1%)
Frame = +3
Query: 3 LVHRLDRESSGLLLMGRTKESISHLHWLFSDVRKAKPFSKEWNDACEEMYQRYWALVIGS 182
LVHRLDRE+SGLL+MGRTKESI +LH +FSD + K WN ACE MYQ+YWALVIGS
Sbjct: 227 LVHRLDRETSGLLVMGRTKESIDYLHSVFSDYKGRNSSCKAWNKACEAMYQQYWALVIGS 286
Query: 183 PKQKEGLICAPLTKVLLDDGETERVILANNSGLEASQEAITEYRVLGPTINGCSWIELRP 362
PK+KEGLI APL+KVLLDDG+T+RV+LA SG EASQ+AITEY+VLGP INGCSW+ELRP
Sbjct: 287 PKEKEGLISAPLSKVLLDDGKTDRVVLAQGSGFEASQDAITEYKVLGPKINGCSWVELRP 346
Query: 363 YTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDFEPMTGEPYKLRRPEGLDV 542
TSRKHQLRVHCAEALGTPIVGDYKYGWFVH RWKQMP+VD EP TG+PYKLRRPEGLDV
Sbjct: 347 ITSRKHQLRVHCAEALGTPIVGDYKYGWFVHKRWKQMPQVDIEPTTGKPYKLRRPEGLDV 406
Query: 543 QKGSVLSKVPLLHLHCREMVLPNVAKFIELHKRPFGNYHVDPEHD---SKPDILRFVAPM 713
QKGSVLSKVPLLHLHCREMVLPN+AKF+ + +P H KPD+LRFVA M
Sbjct: 407 QKGSVLSKVPLLHLHCREMVLPNIAKFLHV----MNQQETEPLHTGIIDKPDLLRFVASM 462
Query: 714 PSHMKISWNLMSSYLV 761
PSHMKISWNLMSSYLV
Sbjct: 463 PSHMKISWNLMSSYLV 478
>ref|XP_006389943.1| hypothetical protein EUTSA_v10018480mg [Eutrema salsugineum]
gi|557086377|gb|ESQ27229.1| hypothetical protein
EUTSA_v10018480mg [Eutrema salsugineum]
Length = 478
Score = 405 bits (1041), Expect = e-111
Identities = 194/256 (75%), Positives = 218/256 (85%), Gaps = 3/256 (1%)
Frame = +3
Query: 3 LVHRLDRESSGLLLMGRTKESISHLHWLFSDVRKAKPFSKEWNDACEEMYQRYWALVIGS 182
L+HRLDRE+SGLL+MGRTKESI HLH +FSD + K WN ACE MYQ+YWALVIGS
Sbjct: 227 LLHRLDRETSGLLVMGRTKESIDHLHSVFSDFKGRDSRCKAWNKACEAMYQQYWALVIGS 286
Query: 183 PKQKEGLICAPLTKVLLDDGETERVILANNSGLEASQEAITEYRVLGPTINGCSWIELRP 362
PK KEG+I AP++KVLLDDG+T+RV+LA SG EASQEAITEYRVLGP INGCSW+ELRP
Sbjct: 287 PKDKEGVISAPISKVLLDDGKTDRVVLARGSGFEASQEAITEYRVLGPMINGCSWLELRP 346
Query: 363 YTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDFEPMTGEPYKLRRPEGLDV 542
TSRKHQLRVHCAEALGTPIVGDYKYGWFVH +WKQMP+VD EP +G+PYKLRRPEGLD+
Sbjct: 347 LTSRKHQLRVHCAEALGTPIVGDYKYGWFVHKKWKQMPQVDIEPTSGKPYKLRRPEGLDI 406
Query: 543 QKGSVLSKVPLLHLHCREMVLPNVAKFIELHKRPFGNYHVDPEHD---SKPDILRFVAPM 713
QKGSVLSKVPLLHLHCREMVLPN+AKF+ + N +D H SKPD+LRFVA M
Sbjct: 407 QKGSVLSKVPLLHLHCREMVLPNIAKFLHV----LNNQEIDSLHPGIISKPDLLRFVASM 462
Query: 714 PSHMKISWNLMSSYLV 761
PSHMKISWN+MSSYLV
Sbjct: 463 PSHMKISWNIMSSYLV 478
>ref|XP_006601250.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like isoform
X1 [Glycine max]
Length = 476
Score = 403 bits (1035), Expect = e-110
Identities = 189/253 (74%), Positives = 219/253 (86%)
Frame = +3
Query: 3 LVHRLDRESSGLLLMGRTKESISHLHWLFSDVRKAKPFSKEWNDACEEMYQRYWALVIGS 182
LVHRLDRESSG+LL+GRTK+S+SHL WLFS++ AK K+WN+ACE YQRYWALVIG+
Sbjct: 226 LVHRLDRESSGILLLGRTKDSVSHLQWLFSNINNAKSSCKDWNEACEATYQRYWALVIGT 285
Query: 183 PKQKEGLICAPLTKVLLDDGETERVILANNSGLEASQEAITEYRVLGPTINGCSWIELRP 362
PK+KEG+I APL+KVLL+DG+TER+ILA++S +E QEA+TEYRVLGP INGCSW+ELRP
Sbjct: 286 PKEKEGIIHAPLSKVLLNDGKTERIILAHHSSVEPRQEAVTEYRVLGPQINGCSWVELRP 345
Query: 363 YTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDFEPMTGEPYKLRRPEGLDV 542
T RKHQLRVHCAEALGTPIVGDYKYGWFVH+RWKQMPRVD EP TG+PYKLRRPEGLDV
Sbjct: 346 LTYRKHQLRVHCAEALGTPIVGDYKYGWFVHSRWKQMPRVDIEPTTGKPYKLRRPEGLDV 405
Query: 543 QKGSVLSKVPLLHLHCREMVLPNVAKFIELHKRPFGNYHVDPEHDSKPDILRFVAPMPSH 722
QKGSVLSKVPLLHLHCRE+VLPN+ KF +H + + +PD+LRFVA MPSH
Sbjct: 406 QKGSVLSKVPLLHLHCRELVLPNIVKF--MHVLNNSSEELRTSLREQPDVLRFVATMPSH 463
Query: 723 MKISWNLMSSYLV 761
M+ISWNLMSSYLV
Sbjct: 464 MRISWNLMSSYLV 476
>ref|XP_006385075.1| hypothetical protein POPTR_0004s23670g [Populus trichocarpa]
gi|550341843|gb|ERP62872.1| hypothetical protein
POPTR_0004s23670g [Populus trichocarpa]
Length = 462
Score = 402 bits (1034), Expect = e-110
Identities = 194/253 (76%), Positives = 218/253 (86%)
Frame = +3
Query: 3 LVHRLDRESSGLLLMGRTKESISHLHWLFSDVRKAKPFSKEWNDACEEMYQRYWALVIGS 182
LVHRLDRESSGLLLMGRTKESI+HL LFS + KA+ WNDACE YQRYWALVIGS
Sbjct: 212 LVHRLDRESSGLLLMGRTKESIAHLQLLFSYINKAQSKCHAWNDACEATYQRYWALVIGS 271
Query: 183 PKQKEGLICAPLTKVLLDDGETERVILANNSGLEASQEAITEYRVLGPTINGCSWIELRP 362
PK KEGLI A L+KVLLDDG+TERV+LA +S LE S++A+TEYRVLGPTINGCSWIELRP
Sbjct: 272 PKDKEGLISARLSKVLLDDGKTERVVLAQHSSLEPSRDAVTEYRVLGPTINGCSWIELRP 331
Query: 363 YTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDFEPMTGEPYKLRRPEGLDV 542
TSRKHQLRVHCAEALGTPIVGDYKYGWFVH RWKQMPRVD EP +G+PYKLR PEG+D+
Sbjct: 332 LTSRKHQLRVHCAEALGTPIVGDYKYGWFVHRRWKQMPRVDIEPSSGKPYKLRWPEGVDI 391
Query: 543 QKGSVLSKVPLLHLHCREMVLPNVAKFIELHKRPFGNYHVDPEHDSKPDILRFVAPMPSH 722
QKGSVL+KVPLLHLHCRE+VLPN+AKF+++ N H P ++PD+LRFVA MPSH
Sbjct: 392 QKGSVLAKVPLLHLHCRELVLPNIAKFLDVLDGKSENVH--PALSTRPDLLRFVASMPSH 449
Query: 723 MKISWNLMSSYLV 761
MKISWNLMSS+LV
Sbjct: 450 MKISWNLMSSFLV 462
>ref|XP_004158518.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Cucumis
sativus]
Length = 471
Score = 402 bits (1033), Expect = e-110
Identities = 192/253 (75%), Positives = 216/253 (85%)
Frame = +3
Query: 3 LVHRLDRESSGLLLMGRTKESISHLHWLFSDVRKAKPFSKEWNDACEEMYQRYWALVIGS 182
LVHRLDRESSG+LLMGRTKES+ HL WLFS++R AK K W +AC YQ+YWALVIG
Sbjct: 222 LVHRLDRESSGILLMGRTKESVDHLQWLFSNIRNAKFTCKAWEEACNATYQKYWALVIGC 281
Query: 183 PKQKEGLICAPLTKVLLDDGETERVILANNSGLEASQEAITEYRVLGPTINGCSWIELRP 362
P+++EG+I APL+KVLLDDG+TERVILAN + +EASQEAITEYRVLGPTINGCSWIEL P
Sbjct: 282 PREREGVISAPLSKVLLDDGKTERVILANKASIEASQEAITEYRVLGPTINGCSWIELCP 341
Query: 363 YTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDFEPMTGEPYKLRRPEGLDV 542
TSRKHQLR+HCAEALGTPIVGDYKYGWFVH RWKQMPRVD EP++G PYKLRRPEGLDV
Sbjct: 342 RTSRKHQLRIHCAEALGTPIVGDYKYGWFVHRRWKQMPRVDVEPISGRPYKLRRPEGLDV 401
Query: 543 QKGSVLSKVPLLHLHCREMVLPNVAKFIELHKRPFGNYHVDPEHDSKPDILRFVAPMPSH 722
QKGSVLSKVPLLHLHCRE+VLPN+AKF+ + +G P D+LRFVA MPSH
Sbjct: 402 QKGSVLSKVPLLHLHCRELVLPNIAKFLNVF---YGKGPNRPVSSFDSDLLRFVARMPSH 458
Query: 723 MKISWNLMSSYLV 761
M+ISWNLMSSYLV
Sbjct: 459 MRISWNLMSSYLV 471
>gb|ESW32964.1| hypothetical protein PHAVU_001G032500g [Phaseolus vulgaris]
Length = 480
Score = 402 bits (1032), Expect = e-110
Identities = 188/253 (74%), Positives = 219/253 (86%)
Frame = +3
Query: 3 LVHRLDRESSGLLLMGRTKESISHLHWLFSDVRKAKPFSKEWNDACEEMYQRYWALVIGS 182
LVHRLDRE+SG+LL+GRTK+S SHL WLF+++ AK K WNDACE YQRYWALVIG+
Sbjct: 230 LVHRLDRETSGILLLGRTKDSASHLQWLFTNINNAKSSCKAWNDACEATYQRYWALVIGT 289
Query: 183 PKQKEGLICAPLTKVLLDDGETERVILANNSGLEASQEAITEYRVLGPTINGCSWIELRP 362
PK+KEG+I APL+KVLL+DG+TER+ILAN+S +E QEA+TE+RVLGP INGCSW+ELRP
Sbjct: 290 PKEKEGIIHAPLSKVLLNDGKTERIILANHSSVEPRQEAVTEFRVLGPKINGCSWVELRP 349
Query: 363 YTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDFEPMTGEPYKLRRPEGLDV 542
T RKHQLRVHCAEALGTPIVGDYKYGWFVH+RWKQMPR+D EP TG+PYKLRRPEGLDV
Sbjct: 350 LTYRKHQLRVHCAEALGTPIVGDYKYGWFVHSRWKQMPRIDIEPTTGKPYKLRRPEGLDV 409
Query: 543 QKGSVLSKVPLLHLHCREMVLPNVAKFIELHKRPFGNYHVDPEHDSKPDILRFVAPMPSH 722
QKGSVLSKVPLLHLHCRE+VLPN+AKF LH + + + +P++LRFVA MPSH
Sbjct: 410 QKGSVLSKVPLLHLHCRELVLPNIAKF--LHVLNNSSEELHSSLNQQPEVLRFVATMPSH 467
Query: 723 MKISWNLMSSYLV 761
M+ISWNLMSSYLV
Sbjct: 468 MRISWNLMSSYLV 480