BLASTX nr result

ID: Rehmannia22_contig00028203 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00028203
         (673 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006367639.1| PREDICTED: LOW QUALITY PROTEIN: putative F-b...    58   3e-06

>ref|XP_006367639.1| PREDICTED: LOW QUALITY PROTEIN: putative F-box protein
           At5g38390-like [Solanum tuberosum]
          Length = 502

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 51/198 (25%), Positives = 75/198 (37%), Gaps = 36/198 (18%)
 Frame = +1

Query: 31  LRLSNVPKLIEFDTSDQRDNTLEQVLPKIPSCILDQLRLLKL----------------ST 162
           L L NVP LIE        N L+ +LP I SC+L QL +LK+                S 
Sbjct: 268 LLLVNVPMLIELHALGFPTNILDAMLPCISSCVLSQLEVLKINSDITIFGKHSEYGLVSE 327

Query: 163 QTF--------------------FIQYTSPTYMLPELVNVKHLALTVHMWRLADSNVALF 282
           QTF                    F Q     Y +P+L  +K   L +  W    + +   
Sbjct: 328 QTFEMCVYLPLYTLLLVLIGVLXFSQVYLGKYKIPQLTMLKKFVLVLEAWE-DRTFLDCT 386

Query: 283 PLVEACPSLEELDIKFLWAYNSIEFEDREICNFRXXXXXXXXXXXXXXXGYLGSPSELEF 462
            ++EA P L E ++  +W         +  C  +               GY G  SELE 
Sbjct: 387 KVIEAAPQLTEFELNLIWIKPK---RSKRECR-KVASCPLHHLKVLKLYGYYGRTSELEL 442

Query: 463 ALFILKNVDALQELIVQP 516
             + L+N   L++++V P
Sbjct: 443 VRYFLENAIVLEKILVDP 460


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