BLASTX nr result
ID: Rehmannia22_contig00027952
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00027952
(401 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004245300.1| PREDICTED: pentatricopeptide repeat-containi... 99 4e-19
ref|XP_006355183.1| PREDICTED: pentatricopeptide repeat-containi... 99 6e-19
ref|XP_006399563.1| hypothetical protein EUTSA_v10013072mg [Eutr... 97 2e-18
ref|XP_002873469.1| pentatricopeptide repeat-containing protein ... 96 5e-18
emb|CBI20759.3| unnamed protein product [Vitis vinifera] 96 6e-18
ref|XP_002280516.1| PREDICTED: pentatricopeptide repeat-containi... 96 6e-18
ref|XP_006287363.1| hypothetical protein CARUB_v10000563mg [Caps... 95 1e-17
ref|NP_568233.1| pentatricopeptide repeat-containing protein [Ar... 95 1e-17
emb|CAC08243.1| putative protein [Arabidopsis thaliana] 95 1e-17
emb|CAN81324.1| hypothetical protein VITISV_041843 [Vitis vinifera] 94 2e-17
gb|AAM63500.1| unknown [Arabidopsis thaliana] 94 2e-17
gb|EOY29221.1| Pentatricopeptide (PPR) repeat-containing protein... 93 3e-17
ref|XP_004136310.1| PREDICTED: pentatricopeptide repeat-containi... 93 4e-17
ref|XP_004498571.1| PREDICTED: pentatricopeptide repeat-containi... 92 5e-17
ref|XP_002515341.1| pentatricopeptide repeat-containing protein,... 92 5e-17
gb|ESW33309.1| hypothetical protein PHAVU_001G059500g [Phaseolus... 92 7e-17
gb|EMJ27633.1| hypothetical protein PRUPE_ppa023621mg, partial [... 91 2e-16
ref|XP_004291235.1| PREDICTED: pentatricopeptide repeat-containi... 90 3e-16
ref|XP_006382144.1| hypothetical protein POPTR_0006s28820g [Popu... 89 8e-16
ref|XP_002330760.1| predicted protein [Populus trichocarpa] 89 8e-16
>ref|XP_004245300.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g10690-like [Solanum lycopersicum]
Length = 632
Score = 99.4 bits (246), Expect = 4e-19
Identities = 51/62 (82%), Positives = 56/62 (90%)
Frame = +3
Query: 216 SDPVNLKPLTSRIVQLTRRRQLAQIFEEIEMAKKQHGKLNIIVMNAVLQACVHCRDIESA 395
S+P NLKPLTSRIV LTRRRQL QIF EIE+AKK+HG+LN IVMNAV+QACVHC DIESA
Sbjct: 73 SEP-NLKPLTSRIVDLTRRRQLHQIFVEIEIAKKRHGQLNTIVMNAVMQACVHCADIESA 131
Query: 396 LR 401
LR
Sbjct: 132 LR 133
>ref|XP_006355183.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g10690-like [Solanum tuberosum]
Length = 637
Score = 99.0 bits (245), Expect = 6e-19
Identities = 50/62 (80%), Positives = 56/62 (90%)
Frame = +3
Query: 216 SDPVNLKPLTSRIVQLTRRRQLAQIFEEIEMAKKQHGKLNIIVMNAVLQACVHCRDIESA 395
S+P NLKPLTSRIV LTRRRQL QIF EIE+AKK+HG+LN I+MNAV+QACVHC DIESA
Sbjct: 78 SEP-NLKPLTSRIVDLTRRRQLHQIFVEIEIAKKRHGQLNTIIMNAVMQACVHCADIESA 136
Query: 396 LR 401
LR
Sbjct: 137 LR 138
>ref|XP_006399563.1| hypothetical protein EUTSA_v10013072mg [Eutrema salsugineum]
gi|557100653|gb|ESQ41016.1| hypothetical protein
EUTSA_v10013072mg [Eutrema salsugineum]
Length = 583
Score = 97.1 bits (240), Expect = 2e-18
Identities = 48/69 (69%), Positives = 57/69 (82%)
Frame = +3
Query: 195 PRLRCPSSDPVNLKPLTSRIVQLTRRRQLAQIFEEIEMAKKQHGKLNIIVMNAVLQACVH 374
PR PSS +NLKPLTSRIV LTRRRQL QI EE+E AKK++G+LN IVMN+VL+ACVH
Sbjct: 30 PRRAIPSSRRLNLKPLTSRIVLLTRRRQLDQIVEEVEAAKKRYGRLNTIVMNSVLEACVH 89
Query: 375 CRDIESALR 401
C D++ ALR
Sbjct: 90 CGDVDLALR 98
>ref|XP_002873469.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297319306|gb|EFH49728.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 575
Score = 95.9 bits (237), Expect = 5e-18
Identities = 48/69 (69%), Positives = 56/69 (81%)
Frame = +3
Query: 195 PRLRCPSSDPVNLKPLTSRIVQLTRRRQLAQIFEEIEMAKKQHGKLNIIVMNAVLQACVH 374
PR P S +NLKPLTSRIV LTRRRQL QI EE+E AKK++GKLN IVMN+VL+ACVH
Sbjct: 27 PRRATPYSRRINLKPLTSRIVLLTRRRQLGQIVEEVEAAKKRYGKLNTIVMNSVLEACVH 86
Query: 375 CRDIESALR 401
C +I+ ALR
Sbjct: 87 CGNIDLALR 95
>emb|CBI20759.3| unnamed protein product [Vitis vinifera]
Length = 570
Score = 95.5 bits (236), Expect = 6e-18
Identities = 56/99 (56%), Positives = 68/99 (68%)
Frame = +3
Query: 105 SAMSTIFCSTATPPGHLRKHHPSKLRKWQQPRLRCPSSDPVNLKPLTSRIVQLTRRRQLA 284
S + + F S+AT +R P KL L S NLK LTSRIVQLTRRRQL
Sbjct: 35 SGLRSSFPSSAT----IRCRFPRKLSSDVPQNL----SHKPNLKRLTSRIVQLTRRRQLD 86
Query: 285 QIFEEIEMAKKQHGKLNIIVMNAVLQACVHCRDIESALR 401
QIFEEIE+AK++HGKLN IVMNAV++ACVHC D++ AL+
Sbjct: 87 QIFEEIEIAKRRHGKLNTIVMNAVMEACVHCGDVDLALK 125
>ref|XP_002280516.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g10690-like [Vitis vinifera]
Length = 609
Score = 95.5 bits (236), Expect = 6e-18
Identities = 56/99 (56%), Positives = 68/99 (68%)
Frame = +3
Query: 105 SAMSTIFCSTATPPGHLRKHHPSKLRKWQQPRLRCPSSDPVNLKPLTSRIVQLTRRRQLA 284
S + + F S+AT +R P KL L S NLK LTSRIVQLTRRRQL
Sbjct: 18 SGLRSSFPSSAT----IRCRFPRKLSSDVPQNL----SHKPNLKRLTSRIVQLTRRRQLD 69
Query: 285 QIFEEIEMAKKQHGKLNIIVMNAVLQACVHCRDIESALR 401
QIFEEIE+AK++HGKLN IVMNAV++ACVHC D++ AL+
Sbjct: 70 QIFEEIEIAKRRHGKLNTIVMNAVMEACVHCGDVDLALK 108
>ref|XP_006287363.1| hypothetical protein CARUB_v10000563mg [Capsella rubella]
gi|482556069|gb|EOA20261.1| hypothetical protein
CARUB_v10000563mg [Capsella rubella]
Length = 580
Score = 94.7 bits (234), Expect = 1e-17
Identities = 47/69 (68%), Positives = 56/69 (81%)
Frame = +3
Query: 195 PRLRCPSSDPVNLKPLTSRIVQLTRRRQLAQIFEEIEMAKKQHGKLNIIVMNAVLQACVH 374
PR P S +NLKPLTSRIV LTRRRQL QI EE+E AKK++G+LN IVMN+VL+ACVH
Sbjct: 30 PRRATPYSRRINLKPLTSRIVLLTRRRQLGQIVEEVEAAKKRYGRLNTIVMNSVLEACVH 89
Query: 375 CRDIESALR 401
C +I+ ALR
Sbjct: 90 CGNIDIALR 98
>ref|NP_568233.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75161461|sp|Q8VYD6.1|PP374_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g10690; AltName: Full=CBS domain-containing protein
CBSPPR1 gi|18176046|gb|AAL59974.1| unknown protein
[Arabidopsis thaliana] gi|20465289|gb|AAM20048.1|
unknown protein [Arabidopsis thaliana]
gi|332004198|gb|AED91581.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 580
Score = 94.7 bits (234), Expect = 1e-17
Identities = 47/69 (68%), Positives = 56/69 (81%)
Frame = +3
Query: 195 PRLRCPSSDPVNLKPLTSRIVQLTRRRQLAQIFEEIEMAKKQHGKLNIIVMNAVLQACVH 374
PR P S +NLKPLTSRIV LTRRRQL QI EE+E AKK++G+LN IVMN+VL+ACVH
Sbjct: 30 PRRATPYSRRINLKPLTSRIVLLTRRRQLGQIVEEVEAAKKRYGRLNTIVMNSVLEACVH 89
Query: 375 CRDIESALR 401
C +I+ ALR
Sbjct: 90 CGNIDLALR 98
>emb|CAC08243.1| putative protein [Arabidopsis thaliana]
Length = 555
Score = 94.7 bits (234), Expect = 1e-17
Identities = 47/69 (68%), Positives = 56/69 (81%)
Frame = +3
Query: 195 PRLRCPSSDPVNLKPLTSRIVQLTRRRQLAQIFEEIEMAKKQHGKLNIIVMNAVLQACVH 374
PR P S +NLKPLTSRIV LTRRRQL QI EE+E AKK++G+LN IVMN+VL+ACVH
Sbjct: 30 PRRATPYSRRINLKPLTSRIVLLTRRRQLGQIVEEVEAAKKRYGRLNTIVMNSVLEACVH 89
Query: 375 CRDIESALR 401
C +I+ ALR
Sbjct: 90 CGNIDLALR 98
>emb|CAN81324.1| hypothetical protein VITISV_041843 [Vitis vinifera]
Length = 1120
Score = 94.0 bits (232), Expect = 2e-17
Identities = 45/58 (77%), Positives = 53/58 (91%)
Frame = +3
Query: 228 NLKPLTSRIVQLTRRRQLAQIFEEIEMAKKQHGKLNIIVMNAVLQACVHCRDIESALR 401
NLK LTSRIVQLTRRRQL QIFEEIE+AK++HGKLN IVMNAV++ACVHC D++ AL+
Sbjct: 51 NLKRLTSRIVQLTRRRQLDQIFEEIEIAKRRHGKLNTIVMNAVMEACVHCGDVDLALK 108
>gb|AAM63500.1| unknown [Arabidopsis thaliana]
Length = 580
Score = 94.0 bits (232), Expect = 2e-17
Identities = 47/69 (68%), Positives = 55/69 (79%)
Frame = +3
Query: 195 PRLRCPSSDPVNLKPLTSRIVQLTRRRQLAQIFEEIEMAKKQHGKLNIIVMNAVLQACVH 374
PR P S +NLKPLTSRIV LTRRRQL QI EE+E AKK++G+LN IVMN+VL+ACVH
Sbjct: 30 PRRATPYSRRINLKPLTSRIVLLTRRRQLGQIVEEVEAAKKRYGRLNTIVMNSVLEACVH 89
Query: 375 CRDIESALR 401
C I+ ALR
Sbjct: 90 CGKIDLALR 98
>gb|EOY29221.1| Pentatricopeptide (PPR) repeat-containing protein / CBS
domain-containing protein [Theobroma cacao]
Length = 600
Score = 93.2 bits (230), Expect = 3e-17
Identities = 51/99 (51%), Positives = 68/99 (68%)
Frame = +3
Query: 102 PSAMSTIFCSTATPPGHLRKHHPSKLRKWQQPRLRCPSSDPVNLKPLTSRIVQLTRRRQL 281
P S IF S ++ +R+ +LR+ P + P NL+ LTSR+VQLTRRRQL
Sbjct: 15 PLLHSNIFSSCSSSSAPIRR----RLRRTFSP------TKPPNLRRLTSRVVQLTRRRQL 64
Query: 282 AQIFEEIEMAKKQHGKLNIIVMNAVLQACVHCRDIESAL 398
QIFEEIE A++++GKLN IVMNAV++ACVHC D++ AL
Sbjct: 65 HQIFEEIESARREYGKLNTIVMNAVMEACVHCGDVDMAL 103
>ref|XP_004136310.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g10690-like [Cucumis sativus]
gi|449505519|ref|XP_004162495.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g10690-like [Cucumis sativus]
Length = 593
Score = 92.8 bits (229), Expect = 4e-17
Identities = 47/68 (69%), Positives = 56/68 (82%)
Frame = +3
Query: 198 RLRCPSSDPVNLKPLTSRIVQLTRRRQLAQIFEEIEMAKKQHGKLNIIVMNAVLQACVHC 377
RLR S NLK LTSR+V LTRR+QL Q+FEEIE+AK+++GKLN IVMNAVL+ACVHC
Sbjct: 35 RLRRVSPRSPNLKRLTSRVVSLTRRKQLHQVFEEIEIAKRRYGKLNTIVMNAVLEACVHC 94
Query: 378 RDIESALR 401
DI+ ALR
Sbjct: 95 GDIDLALR 102
>ref|XP_004498571.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g10690-like [Cicer arietinum]
Length = 601
Score = 92.4 bits (228), Expect = 5e-17
Identities = 54/103 (52%), Positives = 65/103 (63%), Gaps = 12/103 (11%)
Frame = +3
Query: 129 STATPPGHLRKHHPSKLR--KWQQPRLRCPSSDPV----------NLKPLTSRIVQLTRR 272
S+ T P H + HPS + + C SS P+ NLK LTSRIVQLTRR
Sbjct: 8 SSLTVPLHSKPRHPSHISFSSFFSCSCSCSSSFPIRRRLVNPRKTNLKHLTSRIVQLTRR 67
Query: 273 RQLAQIFEEIEMAKKQHGKLNIIVMNAVLQACVHCRDIESALR 401
+QL QI EIE+AKK GKLN IVMNAV++ACV C DI+SAL+
Sbjct: 68 KQLRQIMHEIEVAKKHFGKLNTIVMNAVIEACVRCGDIDSALK 110
>ref|XP_002515341.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223545285|gb|EEF46790.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 600
Score = 92.4 bits (228), Expect = 5e-17
Identities = 47/64 (73%), Positives = 54/64 (84%)
Frame = +3
Query: 210 PSSDPVNLKPLTSRIVQLTRRRQLAQIFEEIEMAKKQHGKLNIIVMNAVLQACVHCRDIE 389
P S NLK LTSR+VQLTRRRQL QIFEEIE+AK + GKLN IVMNAV++ACVHC +I+
Sbjct: 38 PRSRNSNLKQLTSRVVQLTRRRQLQQIFEEIEVAKTRFGKLNKIVMNAVMEACVHCGNID 97
Query: 390 SALR 401
SALR
Sbjct: 98 SALR 101
>gb|ESW33309.1| hypothetical protein PHAVU_001G059500g [Phaseolus vulgaris]
Length = 597
Score = 92.0 bits (227), Expect = 7e-17
Identities = 49/88 (55%), Positives = 61/88 (69%), Gaps = 4/88 (4%)
Frame = +3
Query: 150 HLRKHHPSKLRKWQQPRLR----CPSSDPVNLKPLTSRIVQLTRRRQLAQIFEEIEMAKK 317
H K H S++R P R + NL+ LTSRIVQLTRR+QL QI +EIE+AK+
Sbjct: 17 HSNKLHSSRVRSSSAPARRRLVTTATPSDANLRHLTSRIVQLTRRKQLRQILDEIEVAKR 76
Query: 318 QHGKLNIIVMNAVLQACVHCRDIESALR 401
Q GKLN IVMNAV++ACV C DI+SA+R
Sbjct: 77 QFGKLNTIVMNAVMEACVRCGDIDSAIR 104
>gb|EMJ27633.1| hypothetical protein PRUPE_ppa023621mg, partial [Prunus persica]
Length = 574
Score = 90.5 bits (223), Expect = 2e-16
Identities = 44/57 (77%), Positives = 52/57 (91%)
Frame = +3
Query: 228 NLKPLTSRIVQLTRRRQLAQIFEEIEMAKKQHGKLNIIVMNAVLQACVHCRDIESAL 398
NL+ LTSR+VQLTRRRQL QI EEIEMAK+++GKLN IVMNAV++ACVHC DI+SAL
Sbjct: 30 NLRRLTSRVVQLTRRRQLHQIMEEIEMAKERYGKLNTIVMNAVVEACVHCGDIDSAL 86
>ref|XP_004291235.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g10690-like [Fragaria vesca subsp. vesca]
Length = 582
Score = 90.1 bits (222), Expect = 3e-16
Identities = 46/68 (67%), Positives = 55/68 (80%)
Frame = +3
Query: 198 RLRCPSSDPVNLKPLTSRIVQLTRRRQLAQIFEEIEMAKKQHGKLNIIVMNAVLQACVHC 377
R+ S NLK LTSR+VQLTRRRQL QI EEIE+AK ++GKLN IVMNAV++ACVHC
Sbjct: 20 RITTASPRHSNLKRLTSRVVQLTRRRQLHQIMEEIEIAKGRYGKLNTIVMNAVVEACVHC 79
Query: 378 RDIESALR 401
DI+SAL+
Sbjct: 80 GDIDSALK 87
>ref|XP_006382144.1| hypothetical protein POPTR_0006s28820g [Populus trichocarpa]
gi|550337299|gb|ERP59941.1| hypothetical protein
POPTR_0006s28820g [Populus trichocarpa]
Length = 566
Score = 88.6 bits (218), Expect = 8e-16
Identities = 43/58 (74%), Positives = 51/58 (87%)
Frame = +3
Query: 228 NLKPLTSRIVQLTRRRQLAQIFEEIEMAKKQHGKLNIIVMNAVLQACVHCRDIESALR 401
+LK LT RIVQLTRRRQL QIFEE+E AK+++GKLN IVMNAV++ACVHC D ESAL+
Sbjct: 32 SLKRLTFRIVQLTRRRQLEQIFEEVESAKRRYGKLNTIVMNAVMEACVHCGDTESALK 89
>ref|XP_002330760.1| predicted protein [Populus trichocarpa]
Length = 607
Score = 88.6 bits (218), Expect = 8e-16
Identities = 43/58 (74%), Positives = 51/58 (87%)
Frame = +3
Query: 228 NLKPLTSRIVQLTRRRQLAQIFEEIEMAKKQHGKLNIIVMNAVLQACVHCRDIESALR 401
+LK LT RIVQLTRRRQL QIFEE+E AK+++GKLN IVMNAV++ACVHC D ESAL+
Sbjct: 43 SLKRLTFRIVQLTRRRQLEQIFEEVESAKRRYGKLNTIVMNAVMEACVHCGDTESALK 100