BLASTX nr result
ID: Rehmannia22_contig00027949
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00027949
(392 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002527183.1| hypothetical protein RCOM_1074840 [Ricinus c... 96 6e-18
ref|XP_002524588.1| conserved hypothetical protein [Ricinus comm... 87 3e-15
ref|XP_002525878.1| conserved hypothetical protein [Ricinus comm... 87 3e-15
ref|XP_004305406.1| PREDICTED: putative ribonuclease H protein A... 76 4e-12
ref|XP_004293076.1| PREDICTED: putative ribonuclease H protein A... 75 7e-12
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga... 75 7e-12
gb|EOY30823.1| Ribonuclease H-like superfamily protein [Theobrom... 73 3e-11
ref|XP_006492749.1| PREDICTED: uncharacterized protein LOC102612... 73 4e-11
ref|XP_006491602.1| PREDICTED: uncharacterized protein LOC102623... 73 4e-11
ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626... 72 8e-11
ref|XP_006487889.1| PREDICTED: uncharacterized protein LOC102617... 71 2e-10
ref|XP_004292499.1| PREDICTED: uncharacterized protein LOC101304... 70 3e-10
gb|EOY13397.1| Uncharacterized protein TCM_031959 [Theobroma cacao] 69 5e-10
dbj|BAD05391.1| hypothetical protein [Oryza sativa Japonica Grou... 69 6e-10
ref|XP_006483194.1| PREDICTED: putative ribonuclease H protein A... 68 1e-09
ref|XP_002513210.1| conserved hypothetical protein [Ricinus comm... 68 1e-09
ref|XP_002526850.1| conserved hypothetical protein [Ricinus comm... 68 1e-09
ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621... 66 5e-09
ref|XP_002444500.1| hypothetical protein SORBIDRAFT_07g022916 [S... 66 5e-09
gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ... 65 7e-09
>ref|XP_002527183.1| hypothetical protein RCOM_1074840 [Ricinus communis]
gi|223533448|gb|EEF35196.1| hypothetical protein
RCOM_1074840 [Ricinus communis]
Length = 339
Score = 95.5 bits (236), Expect = 6e-18
Identities = 47/124 (37%), Positives = 75/124 (60%)
Frame = +1
Query: 4 PLHGYLKLNSDAAIYSDNAVGFGFVIRNHIGEIILAGAKKTFMEGSSTLIEGMAILFALK 183
P+ G K+N+DAAIY D GFG V+R+ G+++LAGA++ MEGS+ + E + I +AL+
Sbjct: 215 PVKGMGKVNADAAIYKDGTTGFGCVVRDMSGKVLLAGARRVQMEGSTVVAEALTIRWALE 274
Query: 184 ASKDAGLRNFQIESDCKILIDGLQGTPIPKTKEELIRDDILDAATELNCKDFNFISREAN 363
+G+R+ +E+DCKI+IDGL P+ E++ D ++ F F +AN
Sbjct: 275 TICASGIRDIIMENDCKIVIDGLNDKGCPEIYGEMLLPDTTTIVENIDVPQFVFDKCDAN 334
Query: 364 KAAH 375
+ H
Sbjct: 335 RVTH 338
>ref|XP_002524588.1| conserved hypothetical protein [Ricinus communis]
gi|223536141|gb|EEF37796.1| conserved hypothetical
protein [Ricinus communis]
Length = 136
Score = 86.7 bits (213), Expect = 3e-15
Identities = 43/106 (40%), Positives = 64/106 (60%)
Frame = +1
Query: 73 FVIRNHIGEIILAGAKKTFMEGSSTLIEGMAILFALKASKDAGLRNFQIESDCKILIDGL 252
FV+R+ +G +L GAK+ M+ SST+ E ++ +AL+ K G+R ++ESD K L++GL
Sbjct: 7 FVVRDSVGNALLVGAKRVVMQCSSTVAEACSMRWALETIKACGIRILEVESDSKALVEGL 66
Query: 253 QGTPIPKTKEELIRDDILDAATELNCKDFNFISREANKAAHFLAHF 390
P+ EEL+ D A +L+ K F F ANK AH LAH+
Sbjct: 67 NDNTCPELHEELLVQDTRAVAKDLDVKSFTFTRCSANKVAHKLAHY 112
>ref|XP_002525878.1| conserved hypothetical protein [Ricinus communis]
gi|223534792|gb|EEF36482.1| conserved hypothetical
protein [Ricinus communis]
Length = 543
Score = 86.7 bits (213), Expect = 3e-15
Identities = 49/128 (38%), Positives = 71/128 (55%)
Frame = +1
Query: 1 PPLHGYLKLNSDAAIYSDNAVGFGFVIRNHIGEIILAGAKKTFMEGSSTLIEGMAILFAL 180
PP G K+N+DA ++ D + FV+R+ +G LAGAK+ M+ SST+ E ++ +AL
Sbjct: 421 PPNAGRYKVNTDAGVFRDGYGVYVFVVRDSVGNAFLAGAKRVVMQCSSTVAEACSMRWAL 480
Query: 181 KASKDAGLRNFQIESDCKILIDGLQGTPIPKTKEELIRDDILDAATELNCKDFNFISREA 360
+ K G+R + +DGL P+ EEL+ DI A +L+ K F F R A
Sbjct: 481 ETIKACGIRILE--------VDGLNDNTCPEIHEELLVQDIRADAKDLDVKSFTFTRRNA 532
Query: 361 NKAAHFLA 384
NK AH LA
Sbjct: 533 NKVAHKLA 540
>ref|XP_004305406.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 399
Score = 76.3 bits (186), Expect = 4e-12
Identities = 49/131 (37%), Positives = 71/131 (54%), Gaps = 2/131 (1%)
Frame = +1
Query: 1 PPLHGYLKLNSDAAIYSDNAVGFGFVIRNHIGEIILAGAKKTFMEGSSTL--IEGMAILF 174
PP + ++K+N D ++ +AVG GFV RN G +ILA AK GS+T+ E A+
Sbjct: 231 PPHNNFIKINFDGSVQGRSAVG-GFVFRNSDGNVILAAAKGL---GSTTIPTAEATALRD 286
Query: 175 ALKASKDAGLRNFQIESDCKILIDGLQGTPIPKTKEELIRDDILDAATELNCKDFNFISR 354
L ++D G N Q+E D K++ID + G P + + I DI AT + FN + R
Sbjct: 287 NLVKARDRGYMNVQVEGDSKLVIDAINGKLSPPWRLQKIVQDIRTIATSFSSVCFNHVYR 346
Query: 355 EANKAAHFLAH 387
EAN A A+
Sbjct: 347 EANFVADAFAN 357
>ref|XP_004293076.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 487
Score = 75.5 bits (184), Expect = 7e-12
Identities = 48/131 (36%), Positives = 71/131 (54%), Gaps = 2/131 (1%)
Frame = +1
Query: 1 PPLHGYLKLNSDAAIYSDNAVGFGFVIRNHIGEIILAGAKKTFMEGSSTL--IEGMAILF 174
PP + ++K+N D ++ +A G GFV RN G +ILA AK GS+T+ E A+
Sbjct: 323 PPHNNFIKINFDGSVQGRSAAG-GFVFRNSDGNVILAAAKGL---GSTTIPTAEATALRD 378
Query: 175 ALKASKDAGLRNFQIESDCKILIDGLQGTPIPKTKEELIRDDILDAATELNCKDFNFISR 354
+L ++D G N Q+E D K++ID + G P + + I DI AT + FN + R
Sbjct: 379 SLVKARDRGYMNVQVEGDSKLVIDAINGKLSPPWRLQKIVQDIRTIATSFSSVCFNHVYR 438
Query: 355 EANKAAHFLAH 387
EAN A A+
Sbjct: 439 EANFMADAFAN 449
>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1369
Score = 75.5 bits (184), Expect = 7e-12
Identities = 44/128 (34%), Positives = 68/128 (53%)
Frame = +1
Query: 1 PPLHGYLKLNSDAAIYSDNAVGFGFVIRNHIGEIILAGAKKTFMEGSSTLIEGMAILFAL 180
PP+ G +KLN DAA++ +G G V+R+ G+++LA + + E ++ + L
Sbjct: 1213 PPV-GMVKLNVDAAVFKHVGIGMGGVVRDAEGDVLLATCCGGWAMEDPAMAEACSLRYGL 1271
Query: 181 KASKDAGLRNFQIESDCKILIDGLQGTPIPKTKEELIRDDILDAATELNCKDFNFISREA 360
K + +AG RN +E DCK L L+G T + DDIL A++ + F + R
Sbjct: 1272 KVAYEAGFRNLVVEMDCKKLFLQLRGKASDVTPFGRVVDDILYLASKCSNVVFEHVKRHC 1331
Query: 361 NKAAHFLA 384
NK AH LA
Sbjct: 1332 NKVAHLLA 1339
>gb|EOY30823.1| Ribonuclease H-like superfamily protein [Theobroma cacao]
Length = 536
Score = 73.2 bits (178), Expect = 3e-11
Identities = 41/124 (33%), Positives = 71/124 (57%), Gaps = 3/124 (2%)
Frame = +1
Query: 22 KLNSDAAIYSDNAV---GFGFVIRNHIGEIILAGAKKTFMEGSSTLIEGMAILFALKASK 192
KLN DA+I+ ++V G GF++RN IGE+ LAG ++ M S E A+ ++L+ +
Sbjct: 386 KLNVDASIFELSSVRRMGVGFIVRNAIGEVELAGVRRMVMGQSVEEAELSALAWSLRCCQ 445
Query: 193 DAGLRNFQIESDCKILIDGLQGTPIPKTKEELIRDDILDAATELNCKDFNFISREANKAA 372
+ +IE DCK++++ ++G + ++ +D L+ +NC D SRE N+ A
Sbjct: 446 RENIMVKEIEMDCKMVVEWIKGRHLSGILSPIV-EDCLNLMESINCVDILHCSREGNEVA 504
Query: 373 HFLA 384
H +A
Sbjct: 505 HMIA 508
>ref|XP_006492749.1| PREDICTED: uncharacterized protein LOC102612946 [Citrus sinensis]
Length = 589
Score = 72.8 bits (177), Expect = 4e-11
Identities = 41/129 (31%), Positives = 66/129 (51%), Gaps = 1/129 (0%)
Frame = +1
Query: 1 PPLHGYLKLNSDAAIYSDN-AVGFGFVIRNHIGEIILAGAKKTFMEGSSTLIEGMAILFA 177
PP + +K+N DAA+ D + G G VIRNH G+++ A K +G+ + E A+ +
Sbjct: 433 PPPNNKVKVNVDAAVKEDRKSAGLGVVIRNHRGQVLAAAVKSMNFQGNIAIAEAHAVKWG 492
Query: 178 LKASKDAGLRNFQIESDCKILIDGLQGTPIPKTKEELIRDDILDAATELNCKDFNFISRE 357
++ +KD L + IE+DCK + D +T+ DI + + F + R+
Sbjct: 493 MEVAKDLSLSSVIIETDCKNVADLANKKVSNRTEILWTMSDIHKSTQDFQLISFQHVPRK 552
Query: 358 ANKAAHFLA 384
N AHFLA
Sbjct: 553 CNDFAHFLA 561
>ref|XP_006491602.1| PREDICTED: uncharacterized protein LOC102623801 [Citrus sinensis]
Length = 441
Score = 72.8 bits (177), Expect = 4e-11
Identities = 42/129 (32%), Positives = 68/129 (52%), Gaps = 1/129 (0%)
Frame = +1
Query: 1 PPLHGYLKLNSDAAI-YSDNAVGFGFVIRNHIGEIILAGAKKTFMEGSSTLIEGMAILFA 177
PP G+ K+N DAA+ D G G +IRN GE++ A +++F + SST +E A++
Sbjct: 284 PPPCGWFKINVDAAVNVKDQIAGLGVIIRNSNGEVVAAAIQRSFFQLSSTHMEAEAVILG 343
Query: 178 LKASKDAGLRNFQIESDCKILIDGLQGTPIPKTKEELIRDDILDAATELNCKDFNFISRE 357
+K+++ AG IE+D + ++D + T+ I DI ++ N + RE
Sbjct: 344 IKSAQRAGFSPMIIETDSQEVVDLTLSKKVSITETSWIIADIQESIQSSNQFSIQYTPRE 403
Query: 358 ANKAAHFLA 384
N AH LA
Sbjct: 404 CNVTAHDLA 412
>ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626455 [Citrus sinensis]
Length = 1452
Score = 72.0 bits (175), Expect = 8e-11
Identities = 44/131 (33%), Positives = 66/131 (50%), Gaps = 1/131 (0%)
Frame = +1
Query: 1 PPLHGYLKLNSDAAIYS-DNAVGFGFVIRNHIGEIILAGAKKTFMEGSSTLIEGMAILFA 177
PP LKLN DAA+ + D VG G ++R+ G+I+ G K+ +L E AI +
Sbjct: 1295 PPSQNVLKLNVDAAVSTKDQKVGLGAIVRDAEGKILAVGIKQAQFRERVSLAEAEAIHWG 1354
Query: 178 LKASKDAGLRNFQIESDCKILIDGLQGTPIPKTKEELIRDDILDAATELNCKDFNFISRE 357
L+ + + +ESDCK +++ L T +T+ I D+ + E F+FI R
Sbjct: 1355 LQVANQISSSSLIVESDCKEVVELLNNTKGSRTEIHWILSDVRRESKEFKQVQFSFIPRT 1414
Query: 358 ANKAAHFLAHF 390
N AH LA F
Sbjct: 1415 CNTYAHALAKF 1425
>ref|XP_006487889.1| PREDICTED: uncharacterized protein LOC102617714 [Citrus sinensis]
Length = 1238
Score = 70.9 bits (172), Expect = 2e-10
Identities = 41/129 (31%), Positives = 67/129 (51%), Gaps = 1/129 (0%)
Frame = +1
Query: 1 PPLHGYLKLNSDAAI-YSDNAVGFGFVIRNHIGEIILAGAKKTFMEGSSTLIEGMAILFA 177
PP G+ K+N DAA+ D G G +IRN GE++ A +++F + SST +E A++
Sbjct: 1081 PPPSGWFKINVDAAVNVKDQIAGLGVIIRNSNGEVVAAAIQRSFFQLSSTHMEAEAVILG 1140
Query: 178 LKASKDAGLRNFQIESDCKILIDGLQGTPIPKTKEELIRDDILDAATELNCKDFNFISRE 357
+K+++ AG IE+D + ++D + + I DI ++ N + RE
Sbjct: 1141 IKSAQRAGFSPMIIETDSQEVVDLTLSKKVRIIETSWIIADIQESIQSSNQFSIQYTPRE 1200
Query: 358 ANKAAHFLA 384
N AH LA
Sbjct: 1201 CNVTAHDLA 1209
>ref|XP_004292499.1| PREDICTED: uncharacterized protein LOC101304542 [Fragaria vesca
subsp. vesca]
Length = 202
Score = 70.1 bits (170), Expect = 3e-10
Identities = 42/131 (32%), Positives = 71/131 (54%), Gaps = 2/131 (1%)
Frame = +1
Query: 1 PPLHGYLKLNSDAAIYSDNAVGFGFVIRNHIGEIILAGAKKTFMEGSSTL--IEGMAILF 174
P L+ ++K+N D ++ ++ G G+V RNH G +I++G K+ G +T+ E +A+
Sbjct: 75 PALNSHIKINFDGSVQGNSVAG-GYVFRNHEGNVIISGVKRL---GRTTIPTAEAVALRD 130
Query: 175 ALKASKDAGLRNFQIESDCKILIDGLQGTPIPKTKEELIRDDILDAATELNCKDFNFISR 354
+L +K+ G N Q+ESD K++ID + G + I DI + A + FN +
Sbjct: 131 SLVKAKEQGYHNIQVESDSKLVIDVVNGRISTPWRLLKIIQDIKNIARSFSSISFNHVYG 190
Query: 355 EANKAAHFLAH 387
E N A +AH
Sbjct: 191 ETNFVADAMAH 201
>gb|EOY13397.1| Uncharacterized protein TCM_031959 [Theobroma cacao]
Length = 1217
Score = 69.3 bits (168), Expect = 5e-10
Identities = 39/124 (31%), Positives = 69/124 (55%), Gaps = 3/124 (2%)
Frame = +1
Query: 22 KLNSDAAIYSDNAV---GFGFVIRNHIGEIILAGAKKTFMEGSSTLIEGMAILFALKASK 192
KLN DA+I+ ++V G GF++RN IGE+ LAG ++ M S E A+ ++ + +
Sbjct: 1057 KLNVDASIFELSSVRRMGAGFIVRNAIGEVELAGVRRMVMGQSVEEAELSALAWSFRCCQ 1116
Query: 193 DAGLRNFQIESDCKILIDGLQGTPIPKTKEELIRDDILDAATELNCKDFNFISREANKAA 372
+ +IE DCK++++ ++G + ++ +D L+ + C D SRE N+ A
Sbjct: 1117 RENIMVKEIEMDCKVVVEWIKGRHLSGILGHIV-EDCLNMMESITCVDILHCSREGNEVA 1175
Query: 373 HFLA 384
H +A
Sbjct: 1176 HMIA 1179
>dbj|BAD05391.1| hypothetical protein [Oryza sativa Japonica Group]
gi|40253622|dbj|BAD05566.1| hypothetical protein [Oryza
sativa Japonica Group]
Length = 196
Score = 68.9 bits (167), Expect = 6e-10
Identities = 33/86 (38%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 PPLHGYLKLNSDAAIYSDNAVG-FGFVIRNHIGEIILAGAKKTFMEGSSTLIEGMAILFA 177
PP+ G LKLN D A + + G +GFV+R+H G +LAGA + + + E MA L+A
Sbjct: 67 PPILGELKLNFDGAFFDEGKTGGWGFVVRDHGGHCVLAGAGRIELVHDALCAEAMACLYA 126
Query: 178 LKASKDAGLRNFQIESDCKILIDGLQ 255
L+A+ + G+ + +E+DC +L+ L+
Sbjct: 127 LRAAANNGISHVSVETDCSVLVRALK 152
>ref|XP_006483194.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 765
Score = 68.2 bits (165), Expect = 1e-09
Identities = 42/131 (32%), Positives = 65/131 (49%), Gaps = 1/131 (0%)
Frame = +1
Query: 1 PPLHGYLKLNSDAAIYSD-NAVGFGFVIRNHIGEIILAGAKKTFMEGSSTLIEGMAILFA 177
PP LKLN DAA+ + VG G ++R+ G+I+ G K+ +L E AI +
Sbjct: 608 PPSQNVLKLNVDAAVSTKXQKVGLGAIVRDAEGKILAVGIKQAQFRERVSLAEAEAIHWG 667
Query: 178 LKASKDAGLRNFQIESDCKILIDGLQGTPIPKTKEELIRDDILDAATELNCKDFNFISRE 357
L+ + + +ESDCK +++ L T +T+ I D+ + + F+FI R
Sbjct: 668 LQVANQISSSSLIVESDCKEVVELLNNTKGSRTEIHWILSDVRRESKDFKQVQFSFIPRT 727
Query: 358 ANKAAHFLAHF 390
N AH LA F
Sbjct: 728 CNTYAHALAKF 738
>ref|XP_002513210.1| conserved hypothetical protein [Ricinus communis]
gi|223547708|gb|EEF49201.1| conserved hypothetical
protein [Ricinus communis]
Length = 185
Score = 67.8 bits (164), Expect = 1e-09
Identities = 45/128 (35%), Positives = 60/128 (46%)
Frame = +1
Query: 1 PPLHGYLKLNSDAAIYSDNAVGFGFVIRNHIGEIILAGAKKTFMEGSSTLIEGMAILFAL 180
PPL G LN DA++ D A G V+ N GE++ K+ L EG A+LF L
Sbjct: 47 PPLAGLYTLNCDASVKDDKAA-VGVVLSNERGEVMFCVGKQIGGCLEVELAEGQAVLFGL 105
Query: 181 KASKDAGLRNFQIESDCKILIDGLQGTPIPKTKEELIRDDILDAATELNCKDFNFISREA 360
+ D G + IESDC LI L + +L+ DDI + F I+R+
Sbjct: 106 WCAIDCGFSSIVIESDCSTLIQKLTSIVHGSSPMQLLVDDINHLSESFPFVSFEHINRKV 165
Query: 361 NKAAHFLA 384
N AH LA
Sbjct: 166 NLVAHSLA 173
>ref|XP_002526850.1| conserved hypothetical protein [Ricinus communis]
gi|223533749|gb|EEF35481.1| conserved hypothetical
protein [Ricinus communis]
Length = 126
Score = 67.8 bits (164), Expect = 1e-09
Identities = 34/94 (36%), Positives = 54/94 (57%)
Frame = +1
Query: 106 LAGAKKTFMEGSSTLIEGMAILFALKASKDAGLRNFQIESDCKILIDGLQGTPIPKTKEE 285
+AG K+ + ST+ E +A+ +AL + +++ + ESD K+L+DG G P EE
Sbjct: 1 MAGGKRMVAKACSTMAETLAMRWALTIVGASRIQDIEAESDSKVLVDGSNGKCCPNIHEE 60
Query: 286 LIRDDILDAATELNCKDFNFISREANKAAHFLAH 387
LI DI A + + F F++R AN+ AH +AH
Sbjct: 61 LILQDIQLLADNIGVQSFQFVNRNANRVAHQMAH 94
>ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621413 [Citrus sinensis]
Length = 2303
Score = 65.9 bits (159), Expect = 5e-09
Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 1/129 (0%)
Frame = +1
Query: 1 PPLHGYLKLNSDAAIYS-DNAVGFGFVIRNHIGEIILAGAKKTFMEGSSTLIEGMAILFA 177
PP +LK+N DAAI + D G G VI++ G+I+ AG K+ + + E A+ +
Sbjct: 1178 PPPGNFLKVNVDAAINNRDQVAGLGAVIKDPSGKIVAAGTKQVPLREGVSFAEAEAMEWG 1237
Query: 178 LKASKDAGLRNFQIESDCKILIDGLQGTPIPKTKEELIRDDILDAATELNCKDFNFISRE 357
L+ +++ L +E+DCK ++D L T +T + DI + + F I R
Sbjct: 1238 LQIARELSLSALIMETDCKEVVDLLNNTKGSRTGISWVISDIQEQRRDFKEVKFRHIPRT 1297
Query: 358 ANKAAHFLA 384
N AH LA
Sbjct: 1298 CNTCAHSLA 1306
>ref|XP_002444500.1| hypothetical protein SORBIDRAFT_07g022916 [Sorghum bicolor]
gi|241940850|gb|EES13995.1| hypothetical protein
SORBIDRAFT_07g022916 [Sorghum bicolor]
Length = 317
Score = 65.9 bits (159), Expect = 5e-09
Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 9/137 (6%)
Frame = +1
Query: 1 PPLHGYLKLNSDAAIYSDNAVGF-GFVIRNHIGEIILAGAKKTFMEGSSTLIEGMAILFA 177
PP +LK+N DA + +G GFV+R+H+GE +LAGA + E M LFA
Sbjct: 148 PPDENFLKINFDAGFRKTDGMGTCGFVVRDHLGEAVLAGAANVKPVRDALSAEAMGCLFA 207
Query: 178 LKASKDAGLRNFQIESDCKILIDGLQG---TPIP-----KTKEELIRDDILDAATELNCK 333
L++ + G+ ++E+DC L D + P P ++ EL++D + C
Sbjct: 208 LESVEAVGISRIELETDCSQLQDAIMSQRRDPAPGGVLFRSIRELLQDRFV-------CN 260
Query: 334 DFNFISREANKAAHFLA 384
I R N +AH +A
Sbjct: 261 KVIAIPRSCNSSAHEIA 277
>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
Length = 1747
Score = 65.5 bits (158), Expect = 7e-09
Identities = 45/130 (34%), Positives = 61/130 (46%), Gaps = 1/130 (0%)
Frame = +1
Query: 4 PLHGYLKLNSD-AAIYSDNAVGFGFVIRNHIGEIILAGAKKTFMEGSSTLIEGMAILFAL 180
P G LK+N D AA + D G G +IR+ G +I+AG K SS + E +AI L
Sbjct: 1493 PSSGQLKVNCDGAANFKDRCFGGGTIIRDEFGSLIVAGGKNFQHPVSSLVAELLAIKVGL 1552
Query: 181 KASKDAGLRNFQIESDCKILIDGLQGTPIPKTKEELIRDDILDAATELNCKDFNFISREA 360
+ LRN +ESDC I L E + +DI + +N + RE
Sbjct: 1553 DLVVERRLRNIMVESDCLEAIHLLNSKERCLAPEGGLVEDIQNTMALVNISSIYHVRREG 1612
Query: 361 NKAAHFLAHF 390
N AAH +A F
Sbjct: 1613 NTAAHAIAKF 1622