BLASTX nr result

ID: Rehmannia22_contig00027899 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00027899
         (349 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY03600.1| Pentatricopeptide repeat superfamily protein, put...    57   3e-06

>gb|EOY03600.1| Pentatricopeptide repeat superfamily protein, putative isoform 1
           [Theobroma cacao] gi|508711704|gb|EOY03601.1|
           Pentatricopeptide repeat superfamily protein, putative
           isoform 1 [Theobroma cacao]
          Length = 619

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 45/119 (37%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
 Frame = -2

Query: 324 SIEIKSPCVMEEEKIPIFEGMEVFSENCPQQILPPWGNLS-DQDLEEDE----------N 178
           SIE +  C  +EE I I +G E F  +   Q LPPWGNL  D+ L+ +           N
Sbjct: 100 SIESEMDCEDDEENILIQKGKEEFGLDSLGQNLPPWGNLVVDESLDFEHTSVGQPAISSN 159

Query: 177 HLDNRSEISVKPIHETGXXXXXXXXXXXXXLSKRILELSRSNKVRSALSLYKSMVFSSL 1
             D+  +  V  + ET               S+R+L LSRSNKVRSAL L +SM  S L
Sbjct: 160 GKDSVHDSKVHFLEETNEEEL----------SRRVLMLSRSNKVRSALELCRSMKLSGL 208


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